Miyakogusa Predicted Gene

Lj0g3v0085719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085719.1 tr|A9TMC7|A9TMC7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_147689,37.7,0.000000000000001,Allene oxide
cyclase-like,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Allene_ox_cyc,Allen,gene.g6397.t1.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g069020.1 | allene oxide cyclase | HC | chr4:25915521-2591...   310   9e-85
Medtr7g417750.1 | allene oxide cyclase | HC | chr7:5691093-56895...   295   2e-80
Medtr5g053950.1 | allene oxide cyclase | HC | chr5:22226605-2222...   214   5e-56
Medtr6g017165.1 | allene oxide cyclase | HC | chr6:6797730-68004...   200   9e-52
Medtr6g017155.1 | allene oxide cyclase | HC | chr6:6790575-67928...   192   2e-49
Medtr8g062760.1 | allene oxide cyclase | LC | chr8:26249086-2624...   114   8e-26

>Medtr4g069020.1 | allene oxide cyclase | HC |
           chr4:25915521-25914493 | 20130731
          Length = 257

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 159/248 (64%), Positives = 182/248 (73%), Gaps = 36/248 (14%)

Query: 46  ATIPSAFVKPST-ANPRSLLTAP-PTKSFSPFNSTTPSLTVNLKLNNTLPHSCFSLVPKK 103
           +++P+  +KPS  A P +  T P P  +FSPF S+ PSLT NLK+N  LP SCFS + KK
Sbjct: 10  SSVPTTLMKPSAIATPTAFHTPPLPINAFSPFASSIPSLTRNLKINTALPQSCFSSLHKK 69

Query: 104 SFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSNKLYTGD 163
           +F+C+S   ++SD EKVQELNVYEINERDRGSPAYLRLGFK VNSLGDLVPFSNKLYTGD
Sbjct: 70  AFTCKSQVDQNSDIEKVQELNVYEINERDRGSPAYLRLGFKSVNSLGDLVPFSNKLYTGD 129

Query: 164 LQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLAVT--- 220
           LQKRI I+AGICILI+HK EK G RYEAIY+F+ GDYG IAVQGPYLTYEDT+L VT   
Sbjct: 130 LQKRIGITAGICILIQHKAEKYGDRYEAIYSFHVGDYGQIAVQGPYLTYEDTYLTVTGGT 189

Query: 221 -------------------------------DLPQELLGKPVEPHPSVEATPAAKALEPH 249
                                          DLPQELLGKPVEP+P+VEA+PAAKALEPH
Sbjct: 190 GIFEGVTGQVKLNQIVFPFKIFYTFYLKGIKDLPQELLGKPVEPNPNVEASPAAKALEPH 249

Query: 250 ATIAGFTN 257
           ATIAGFTN
Sbjct: 250 ATIAGFTN 257


>Medtr7g417750.1 | allene oxide cyclase | HC | chr7:5691093-5689556
           | 20130731
          Length = 250

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/255 (61%), Positives = 180/255 (70%), Gaps = 44/255 (17%)

Query: 40  SCNLNIATIPSAFVKPST--ANPRSLLTAPPTKSFSPFNSTTPSLTVNLKLNNTLPHSCF 97
           S +  + TIPS+FV+P+     PRS LT  P+ +F+PF S+      NLK+N     SCF
Sbjct: 3   SSSYALRTIPSSFVRPTAFATTPRSFLT--PSSAFTPFTSSK-----NLKMNAAFSKSCF 55

Query: 98  SLVPKKSFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSN 157
           S VP KSF+C+S  TE +DTEKVQE++VYE+NERDRGSPAYLRL  K VNSLGDLVPFSN
Sbjct: 56  SSVPMKSFTCKSQVTEYADTEKVQEMHVYELNERDRGSPAYLRLSNKSVNSLGDLVPFSN 115

Query: 158 KLYTGDLQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTY-EDTW 216
           KLYTGDLQKRI I+ GICILIEHK EK+G RYEAIY+F+FGDYGH+AVQGPYLTY EDT+
Sbjct: 116 KLYTGDLQKRIGITTGICILIEHKAEKKGDRYEAIYSFHFGDYGHLAVQGPYLTYPEDTY 175

Query: 217 LAVT----------------------------------DLPQELLGKPVEPHPSVEATPA 242
           LAVT                                  DLPQELLGK VEP P+VEA+PA
Sbjct: 176 LAVTGGSGIFEGVKGQVKLHQIVFPFKIFYTFYLRGIKDLPQELLGKHVEPSPAVEASPA 235

Query: 243 AKALEPHATIAGFTN 257
           AKALEPHA IAGFTN
Sbjct: 236 AKALEPHAVIAGFTN 250


>Medtr5g053950.1 | allene oxide cyclase | HC |
           chr5:22226605-22227949 | 20130731
          Length = 252

 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 117/229 (51%), Positives = 147/229 (64%), Gaps = 44/229 (19%)

Query: 64  LTAPPTKSFSPFNSTTPSL-TVNLKLNNTLPHSCFSLVPKKSFSCRSHATESSDTEKVQE 122
           L+ P  ++F+   STT  + T      NT  ++ F       F+ +    ESS   KVQE
Sbjct: 33  LSFPSRRNFN--TSTTKQVSTTKRSSQNTRTNALF-------FNNQKQHQESSKPAKVQE 83

Query: 123 LNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSNKLYTGDLQKRIVISAGICILIEHKE 182
           L VYEINERDRGSPAYLRL  K VNSLGDLVPFSNKLY+G+L+KR+ I++G+CILI+++ 
Sbjct: 84  LFVYEINERDRGSPAYLRLSQKSVNSLGDLVPFSNKLYSGNLEKRLGITSGLCILIQNEP 143

Query: 183 EKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLAVT---------------------- 220
           EK+G RYEAIY+FYFGDYGHI+VQGPYLTY+DT+LA+T                      
Sbjct: 144 EKKGDRYEAIYSFYFGDYGHISVQGPYLTYQDTYLAITGGSGIFEGVYGQVKLQQLVFPF 203

Query: 221 ------------DLPQELLGKPVEPHPSVEATPAAKALEPHATIAGFTN 257
                       DLP +LLGKPV+P P VE + AAKA EPHA++  FTN
Sbjct: 204 KLFYTFYLKGVADLPADLLGKPVDPSPHVEPSTAAKATEPHASLPNFTN 252


>Medtr6g017165.1 | allene oxide cyclase | HC | chr6:6797730-6800407
           | 20130731
          Length = 234

 Score =  200 bits (509), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/233 (49%), Positives = 143/233 (61%), Gaps = 41/233 (17%)

Query: 40  SCNLNIATIPSAFVKPSTANPRSLLTAPPTKSFSPFNS-TTPSLTVNLKLNNTLPHSCFS 98
           S + ++ TI S + KPS     S L      +  PF+S TTP  T+NL +N +   S  S
Sbjct: 3   SSSFSLRTISSFYTKPSNT-KSSQLNISSKSTILPFSSLTTP--TLNLNINTS---SLNS 56

Query: 99  LVPKKSFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSNK 158
               KSF C+S A +SS++ KVQEL+VYEINE+DRGSPAYLRL  K VN+L DLVPFSNK
Sbjct: 57  YQSNKSFICKSQAYQSSNSVKVQELSVYEINEKDRGSPAYLRLSQKNVNTLNDLVPFSNK 116

Query: 159 LYTGDLQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLA 218
           LY+G LQKR+ I+AGIC+LI++K EK+G  YEAIY+FYFGDYGHI VQG YLTYEDT+L 
Sbjct: 117 LYSGCLQKRVGITAGICVLIQNKAEKKGDIYEAIYSFYFGDYGHIYVQGSYLTYEDTYLV 176

Query: 219 VT----------------------------------DLPQELLGKPVEPHPSV 237
           VT                                  DLP E L  P+EP+  +
Sbjct: 177 VTGGTGIFEGVYGQVKLHQIVFPFKLFYTFYLMGIKDLPHEFLVDPIEPNDVI 229


>Medtr6g017155.1 | allene oxide cyclase | HC | chr6:6790575-6792878
           | 20130731
          Length = 249

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/248 (47%), Positives = 146/248 (58%), Gaps = 41/248 (16%)

Query: 45  IATIPSAFVKPSTANPRSLLTAPPTKSFSPFNSTTPSLTVNLKLNNTLPHSCFSLVPKKS 104
           +  I S + KPS        ++ P  S+       PSLT     N  +  S  S    KS
Sbjct: 8   LRKISSFYAKPSNTK-----SSQPNISYKSTILPFPSLTTTTLNNLNINTSLHSYQSNKS 62

Query: 105 FSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSNKLYTGDL 164
           F C+S   +SS++ KVQEL+VYEINE+DRGSP YLRL  K VN L DL+ FSNKLY+G L
Sbjct: 63  FICKSQ-DQSSNSVKVQELSVYEINEKDRGSPVYLRLSQKNVNILDDLISFSNKLYSGCL 121

Query: 165 QKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTY-EDTWLAVT--- 220
           QKR+ I+AGIC+LI++K EK+G  YEAIY+FYFG+YGHI+VQG YLTY EDT+LAVT   
Sbjct: 122 QKRVGITAGICVLIQNKAEKKGDIYEAIYSFYFGEYGHISVQGSYLTYEEDTYLAVTGGT 181

Query: 221 -------------------------------DLPQELLGKPVEPHPSVEATPAAKALEPH 249
                                          DLP E L  P+EP+ +V+ +  AK  EPH
Sbjct: 182 GIFEGVYGQVKLHQIVFPFKIFYTFYLKGIKDLPHEFLVNPIEPNLAVKPSLDAKDYEPH 241

Query: 250 ATIAGFTN 257
           A IAGFTN
Sbjct: 242 AVIAGFTN 249


>Medtr8g062760.1 | allene oxide cyclase | LC |
           chr8:26249086-26248173 | 20130731
          Length = 119

 Score =  114 bits (285), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 75/113 (66%), Gaps = 14/113 (12%)

Query: 45  IATIPSAFVKPST--ANPRSLLTAPPTKSFSPFNSTTPSLTVNLKLNNTLPHSCFSLVPK 102
           + TIPS+FVKP+     P+S LT  P+ +F          T NL++N     SCFS +P 
Sbjct: 8   LRTIPSSFVKPTAFATTPKSFLT--PSSAF----------TKNLRMNTAFSQSCFSSLPM 55

Query: 103 KSFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPF 155
           KSF+C+S A E +DTEKVQE++VYE NE DRGSPAY RL  K VNSLGDLV F
Sbjct: 56  KSFTCKSQANEHADTEKVQEMHVYEFNESDRGSPAYSRLSNKSVNSLGDLVSF 108