Miyakogusa Predicted Gene

Lj0g3v0085579.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085579.2 Non Characterized Hit- tr|K4B0H3|K4B0H3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,43.51,2e-19,DUF1517,Protein of unknown function DUF1517;
seg,NULL,CUFF.4519.2
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063940.2 | transmembrane protein, putative | HC | chr3:28...   121   3e-28
Medtr3g063940.1 | transmembrane protein, putative | HC | chr3:28...   121   3e-28
Medtr3g063950.1 | transmembrane protein, putative | LC | chr3:28...   113   1e-25
Medtr7g114660.1 | plant/F20D21-34 protein | HC | chr7:47343543-4...    86   2e-17
Medtr8g465010.1 | DUF1517 family protein | LC | chr8:23097779-23...    80   9e-16
Medtr8g031500.1 | plant/F20D21-34 protein | LC | chr8:11828564-1...    62   2e-10
Medtr3g063940.3 | transmembrane protein, putative | HC | chr3:28...    53   1e-07

>Medtr3g063940.2 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 335

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 97/161 (60%), Gaps = 18/161 (11%)

Query: 9   KYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYI 68
           K +NQLSNEER KFDE TLV     N+  N  T+  ++    +            GNE  
Sbjct: 187 KCYNQLSNEERAKFDEETLV-----NLTDNHKTIIRSQSYDKI------------GNENS 229

Query: 69  ALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXX 128
             D+++S++E++KFE E+LL    N+YIV+ +LVA KG HKLP+ NGAEDLK+ L     
Sbjct: 230 TFDVRKSSEEAEKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLK 288

Query: 129 XXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHLVESMK 169
                    AGEVLWTPQKE++++   KLLKDY  L +SMK
Sbjct: 289 SLISSKYLLAGEVLWTPQKENDTVSDAKLLKDYLQLAKSMK 329


>Medtr3g063940.1 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 335

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 97/161 (60%), Gaps = 18/161 (11%)

Query: 9   KYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYI 68
           K +NQLSNEER KFDE TLV     N+  N  T+  ++    +            GNE  
Sbjct: 187 KCYNQLSNEERAKFDEETLV-----NLTDNHKTIIRSQSYDKI------------GNENS 229

Query: 69  ALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXX 128
             D+++S++E++KFE E+LL    N+YIV+ +LVA KG HKLP+ NGAEDLK+ L     
Sbjct: 230 TFDVRKSSEEAEKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLK 288

Query: 129 XXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHLVESMK 169
                    AGEVLWTPQKE++++   KLLKDY  L +SMK
Sbjct: 289 SLISSKYLLAGEVLWTPQKENDTVSDAKLLKDYLQLAKSMK 329


>Medtr3g063950.1 | transmembrane protein, putative | LC |
           chr3:28776329-28771116 | 20130731
          Length = 326

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 18/168 (10%)

Query: 2   KDREGVKKYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXN 61
           +  EG +  +NQLS EER KFD  TLV     N+ +N  T            +      +
Sbjct: 175 RSEEGGETCYNQLSIEEREKFDGETLV-----NLSNNNKT------------RIRSQSYD 217

Query: 62  GSGNEYIALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKK 121
              NEY   D+K++A+E++K E+E+L   F N+YIVVTILVA +G+H+LPN   AEDLK+
Sbjct: 218 RFSNEYSTFDVKKNAEETEKLEKEKLRSGFDNKYIVVTILVATRGSHELPNMKAAEDLKE 277

Query: 122 ALQXXXXXXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHLVESMK 169
           ALQ             AGEVLWTPQKEDE+L   KLLKDYP L +SMK
Sbjct: 278 ALQ-KLKSHLYWRDLLAGEVLWTPQKEDETLSDGKLLKDYPQLAKSMK 324


>Medtr7g114660.1 | plant/F20D21-34 protein | HC |
           chr7:47343543-47349072 | 20130731
          Length = 390

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 77/156 (49%), Gaps = 47/156 (30%)

Query: 9   KYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYI 68
           K FNQLS EERGKFDE TLV   +VN                                  
Sbjct: 279 KRFNQLSIEERGKFDEETLV---NVN---------------------------------- 301

Query: 69  ALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXX 128
             +IK  +  SQ+         F NEYIV+TIL AA+G HKLP  NG+ +LK+ALQ    
Sbjct: 302 --NIKRQSTRSQRSNG------FSNEYIVITILAAAEGEHKLPGINGSGNLKEALQ--KL 351

Query: 129 XXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHL 164
                    A EVLWTPQ E+++L  R+LL+DYP L
Sbjct: 352 GSIPSSKLLAVEVLWTPQNENDTLSERELLEDYPLL 387


>Medtr8g465010.1 | DUF1517 family protein | LC |
           chr8:23097779-23093536 | 20130731
          Length = 385

 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 75/154 (48%), Gaps = 47/154 (30%)

Query: 11  FNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYIAL 70
           FNQLS EERGKFD+ TLV         N D                              
Sbjct: 276 FNQLSIEERGKFDDETLV---------NVD------------------------------ 296

Query: 71  DIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXX 130
           +IK  +  SQ      +     NEYIV+TIL AA+G HKLP+ NG+ +LK+ALQ      
Sbjct: 297 NIKRQSTRSQ------ISNGCSNEYIVITILAAAEGEHKLPSINGSGNLKEALQ--KLGS 348

Query: 131 XXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHL 164
                  A EVLWTPQ E+++L  R+LL+DYP L
Sbjct: 349 IPSSKLLAVEVLWTPQDENDTLSERELLEDYPLL 382


>Medtr8g031500.1 | plant/F20D21-34 protein | LC |
           chr8:11828564-11825656 | 20130731
          Length = 345

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 95  YIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXXXXXXXXXAGEVLWTPQKEDESLPG 154
           Y  +TIL AA+G HKLP+ NG+  LK+ALQ             A EVLWTPQ E+++L  
Sbjct: 275 YSSITILAAAEGEHKLPSINGSGKLKEALQ--KLVSIPSSKLLAVEVLWTPQDENDTLLE 332

Query: 155 RKLLKDYPHL 164
           R+LL+DYP L
Sbjct: 333 RELLEDYPLL 342


>Medtr3g063940.3 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 274

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 17/90 (18%)

Query: 9   KYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYI 68
           K +NQLSNEER KFDE TLV     N+  N  T+  ++    +            GNE  
Sbjct: 187 KCYNQLSNEERAKFDEETLV-----NLTDNHKTIIRSQSYDKI------------GNENS 229

Query: 69  ALDIKESADESQKFEEEELLKVFGNEYIVV 98
             D+++S++E++KFE E+LL    N+YIV+
Sbjct: 230 TFDVRKSSEEAEKFETEKLLDGPDNKYIVL 259