Miyakogusa Predicted Gene

Lj0g3v0085579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085579.1 Non Characterized Hit- tr|B4WH57|B4WH57_9SYNE
Putative uncharacterized protein OS=Synechococcus sp.
,32.49,2e-18,DUF1517,Protein of unknown function DUF1517; seg,NULL;
PROKAR_LIPOPROTEIN,NULL,CUFF.4519.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g063940.2 | transmembrane protein, putative | HC | chr3:28...   197   1e-50
Medtr3g063940.1 | transmembrane protein, putative | HC | chr3:28...   197   1e-50
Medtr3g063950.1 | transmembrane protein, putative | LC | chr3:28...   181   1e-45
Medtr7g114660.1 | plant/F20D21-34 protein | HC | chr7:47343543-4...   146   3e-35
Medtr8g465010.1 | DUF1517 family protein | LC | chr8:23097779-23...   135   8e-32
Medtr3g063940.3 | transmembrane protein, putative | HC | chr3:28...   129   5e-30
Medtr8g031500.1 | plant/F20D21-34 protein | LC | chr8:11828564-1...    63   5e-10

>Medtr3g063940.2 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 335

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/276 (43%), Positives = 166/276 (60%), Gaps = 25/276 (9%)

Query: 69  GKEALSPSRERELEFFILSWIILFGILFLAYW---LYIQENTNTLCKLQVAVFGGNKGSS 125
           G + ++      L FF+   I  FGI F+ +W        N+ T+ KLQV +     G++
Sbjct: 76  GDDKVASGGNGPLVFFM---IFAFGIFFVGFWNKDANGNRNSVTVLKLQVGMLV-EVGNT 131

Query: 126 VQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGYSSVDLMKDREGVKKYFNQ 185
           +Q DL RIA+AA+TSSREGV +LL ET++ LD+     +AGYSSVDL + ++  +K +NQ
Sbjct: 132 IQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKRSKDDGEKCYNQ 191

Query: 186 LSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYIALDIK 245
           LSNEER KFDE TL     VN+  N  T+  ++    +            GNE    D++
Sbjct: 192 LSNEERAKFDEETL-----VNLTDNHKTIIRSQSYDKI------------GNENSTFDVR 234

Query: 246 ESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXXXXX 305
           +S++E++KFE E+LL    N+YIV+ +LVA KG HKLP+ NGAEDLK+ L          
Sbjct: 235 KSSEEAEKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLKSLISS 293

Query: 306 XXXXAGEVLWTPQKEDESLPGRKLLKDYPHLVESMK 341
               AGEVLWTPQKE++++   KLLKDY  L +SMK
Sbjct: 294 KYLLAGEVLWTPQKENDTVSDAKLLKDYLQLAKSMK 329


>Medtr3g063940.1 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 335

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/276 (43%), Positives = 166/276 (60%), Gaps = 25/276 (9%)

Query: 69  GKEALSPSRERELEFFILSWIILFGILFLAYW---LYIQENTNTLCKLQVAVFGGNKGSS 125
           G + ++      L FF+   I  FGI F+ +W        N+ T+ KLQV +     G++
Sbjct: 76  GDDKVASGGNGPLVFFM---IFAFGIFFVGFWNKDANGNRNSVTVLKLQVGMLV-EVGNT 131

Query: 126 VQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGYSSVDLMKDREGVKKYFNQ 185
           +Q DL RIA+AA+TSSREGV +LL ET++ LD+     +AGYSSVDL + ++  +K +NQ
Sbjct: 132 IQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKRSKDDGEKCYNQ 191

Query: 186 LSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYIALDIK 245
           LSNEER KFDE TL     VN+  N  T+  ++    +            GNE    D++
Sbjct: 192 LSNEERAKFDEETL-----VNLTDNHKTIIRSQSYDKI------------GNENSTFDVR 234

Query: 246 ESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXXXXX 305
           +S++E++KFE E+LL    N+YIV+ +LVA KG HKLP+ NGAEDLK+ L          
Sbjct: 235 KSSEEAEKFETEKLLDGPDNKYIVIILLVAVKGAHKLPDINGAEDLKEVLP-KLKSLISS 293

Query: 306 XXXXAGEVLWTPQKEDESLPGRKLLKDYPHLVESMK 341
               AGEVLWTPQKE++++   KLLKDY  L +SMK
Sbjct: 294 KYLLAGEVLWTPQKENDTVSDAKLLKDYLQLAKSMK 329


>Medtr3g063950.1 | transmembrane protein, putative | LC |
           chr3:28776329-28771116 | 20130731
          Length = 326

 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/259 (45%), Positives = 159/259 (61%), Gaps = 23/259 (8%)

Query: 87  SWIILFGILFLAYWLY-IQENTNT---LCKLQVAVFGGNKGSSVQSDLTRIAKAADTSSR 142
           +++++ GI+ + Y +    EN +T   + KLQV +     G ++Q DL RIA+AA+TSS+
Sbjct: 85  AFLLMVGIMVVIYVVCRCTENNDTPVTVLKLQVGMLD-EMGCTLQRDLARIAEAANTSSK 143

Query: 143 EGVSHLLIETIEALDRQPSSLIAGYSSVDLMKDREGVKKYFNQLSNEERGKFDEVTLVKR 202
           EGV  LL ETI+ LD+     IAGYSSVDL +  EG +  +NQLS EER KFD  TLV  
Sbjct: 144 EGVRCLLKETIQTLDKHHGYCIAGYSSVDLKRSEEGGETCYNQLSIEEREKFDGETLV-- 201

Query: 203 SSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYIALDIKESADESQKFEEEELLKV 262
              N+ +N  T            +      +   NEY   D+K++A+E++K E+E+L   
Sbjct: 202 ---NLSNNNKT------------RIRSQSYDRFSNEYSTFDVKKNAEETEKLEKEKLRSG 246

Query: 263 FGNEYIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXXXXXXXXXAGEVLWTPQKEDE 322
           F N+YIVVTILVA +G+H+LPN   AEDLK+ALQ             AGEVLWTPQKEDE
Sbjct: 247 FDNKYIVVTILVATRGSHELPNMKAAEDLKEALQ-KLKSHLYWRDLLAGEVLWTPQKEDE 305

Query: 323 SLPGRKLLKDYPHLVESMK 341
           +L   KLLKDYP L +SMK
Sbjct: 306 TLSDGKLLKDYPQLAKSMK 324


>Medtr7g114660.1 | plant/F20D21-34 protein | HC |
           chr7:47343543-47349072 | 20130731
          Length = 390

 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 125/228 (54%), Gaps = 49/228 (21%)

Query: 109 TLCKLQVAVFGGNKGSSVQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGYS 168
           T+ KLQV + G   G S+Q DL RIA+ ADTSS EG++++L ET  AL R P   I+GYS
Sbjct: 209 TVLKLQVGLLG--MGRSLQRDLNRIAEVADTSSPEGLNYILTETSLALLRHPDYCISGYS 266

Query: 169 SVDLMKDREGVKKYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXX 228
           SVD+ +  E  +K FNQLS EERGKFDE TLV   +VN                      
Sbjct: 267 SVDIKRGIEEGEKRFNQLSIEERGKFDEETLV---NVN---------------------- 301

Query: 229 XXXXNGSGNEYIALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNGA 288
                         +IK  +  SQ+         F NEYIV+TIL AA+G HKLP  NG+
Sbjct: 302 --------------NIKRQSTRSQRSNG------FSNEYIVITILAAAEGEHKLPGINGS 341

Query: 289 EDLKKALQXXXXXXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHL 336
            +LK+ALQ             A EVLWTPQ E+++L  R+LL+DYP L
Sbjct: 342 GNLKEALQ--KLGSIPSSKLLAVEVLWTPQNENDTLSERELLEDYPLL 387


>Medtr8g465010.1 | DUF1517 family protein | LC |
           chr8:23097779-23093536 | 20130731
          Length = 385

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 121/229 (52%), Gaps = 49/229 (21%)

Query: 108 NTLCKLQVAVFGGNKGSSVQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGY 167
            T+ KLQV + G   G S+Q DL RIA+ ADTSS EG++++L ET  AL R P   I+ Y
Sbjct: 203 TTVLKLQVGLLG--TGRSLQRDLNRIAEVADTSSPEGLNYILTETSLALLRHPDYCISVY 260

Query: 168 SSVDLMKDREGVKKYFNQLSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKX 227
           SSVD+ +  E  ++ FNQLS EERGKFD+ TLV         N D   N K      Q  
Sbjct: 261 SSVDIKRGIEEGEECFNQLSIEERGKFDDETLV---------NVD---NIKR-----QST 303

Query: 228 XXXXXNGSGNEYIALDIKESADESQKFEEEELLKVFGNEYIVVTILVAAKGTHKLPNNNG 287
                NG  NE                            YIV+TIL AA+G HKLP+ NG
Sbjct: 304 RSQISNGCSNE----------------------------YIVITILAAAEGEHKLPSING 335

Query: 288 AEDLKKALQXXXXXXXXXXXXXAGEVLWTPQKEDESLPGRKLLKDYPHL 336
           + +LK+ALQ             A EVLWTPQ E+++L  R+LL+DYP L
Sbjct: 336 SGNLKEALQ--KLGSIPSSKLLAVEVLWTPQDENDTLSERELLEDYPLL 382


>Medtr3g063940.3 | transmembrane protein, putative | HC |
           chr3:28768782-28763981 | 20130731
          Length = 274

 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 24/205 (11%)

Query: 69  GKEALSPSRERELEFFILSWIILFGILFLAYW---LYIQENTNTLCKLQVAVFGGNKGSS 125
           G + ++      L FF+   I  FGI F+ +W        N+ T+ KLQV +     G++
Sbjct: 76  GDDKVASGGNGPLVFFM---IFAFGIFFVGFWNKDANGNRNSVTVLKLQVGMLV-EVGNT 131

Query: 126 VQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGYSSVDLMKDREGVKKYFNQ 185
           +Q DL RIA+AA+TSSREGV +LL ET++ LD+     +AGYSSVDL + ++  +K +NQ
Sbjct: 132 IQRDLARIAEAANTSSREGVCNLLKETMQTLDQHHGFCVAGYSSVDLKRSKDDGEKCYNQ 191

Query: 186 LSNEERGKFDEVTLVKRSSVNVFSNEDTLWNAKESINVPQKXXXXXXNGSGNEYIALDIK 245
           LSNEER KFDE TL     VN+  N  T+  ++    +            GNE    D++
Sbjct: 192 LSNEERAKFDEETL-----VNLTDNHKTIIRSQSYDKI------------GNENSTFDVR 234

Query: 246 ESADESQKFEEEELLKVFGNEYIVV 270
           +S++E++KFE E+LL    N+YIV+
Sbjct: 235 KSSEEAEKFETEKLLDGPDNKYIVL 259


>Medtr8g031500.1 | plant/F20D21-34 protein | LC |
           chr8:11828564-11825656 | 20130731
          Length = 345

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 267 YIVVTILVAAKGTHKLPNNNGAEDLKKALQXXXXXXXXXXXXXAGEVLWTPQKEDESLPG 326
           Y  +TIL AA+G HKLP+ NG+  LK+ALQ             A EVLWTPQ E+++L  
Sbjct: 275 YSSITILAAAEGEHKLPSINGSGKLKEALQ--KLVSIPSSKLLAVEVLWTPQDENDTLLE 332

Query: 327 RKLLKDYPHL 336
           R+LL+DYP L
Sbjct: 333 RELLEDYPLL 342



 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 109 TLCKLQVAVFGGNKGSSVQSDLTRIAKAADTSSREGVSHLLIETIEALDRQPSSLIAGYS 168
           T+ KLQV + G  +  S+Q DL RIA+ ADTSS EG++++L ET  AL R     I+GYS
Sbjct: 219 TVLKLQVGLLGTVR--SLQRDLNRIAEVADTSSPEGLNYILTETSLALIRHLDYCISGYS 276

Query: 169 SVDLMKDREGVKK 181
           S+ ++   EG  K
Sbjct: 277 SITILAAAEGEHK 289