Miyakogusa Predicted Gene

Lj0g3v0085239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085239.1 Non Characterized Hit- tr|I1JQ40|I1JQ40_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,78.85,4e-17,seg,NULL,CUFF.4488.1
         (64 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105050.1 | beta-fructofuranosidase, insoluble protein | H...    89   8e-19
Medtr1g059700.1 | beta-fructofuranosidase; cell wall invertase I...    78   2e-15
Medtr8g017410.1 | cell-wall invertase | HC | chr8:5901126-590568...    46   6e-06
Medtr8g017410.3 | cell-wall invertase | HC | chr8:5901151-590568...    46   1e-05

>Medtr7g105050.1 | beta-fructofuranosidase, insoluble protein | HC
          | chr7:42588772-42592563 | 20130731
          Length = 574

 Score = 89.0 bits (219), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 1  MVLSKSLTXXXXXXXXXXXXLINNGVEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNW 60
          MVLSK +T            LINNGVEAFHK+YPHLQSVSA+SVS +HRTGYHFQPPRNW
Sbjct: 1  MVLSKVVTIFVAVLSISLL-LINNGVEAFHKVYPHLQSVSAISVSEVHRTGYHFQPPRNW 59

Query: 61 IN 62
          IN
Sbjct: 60 IN 61


>Medtr1g059700.1 | beta-fructofuranosidase; cell wall invertase I;
          fructosidase | HC | chr1:25955589-25950771 | 20130731
          Length = 568

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 21 LINNGVEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWING 63
          + NNGV+AFH+ YPHLQSVSA SVS +HRTGYHFQP RNWING
Sbjct: 16 ICNNGVQAFHRKYPHLQSVSARSVSKLHRTGYHFQPNRNWING 58


>Medtr8g017410.1 | cell-wall invertase | HC | chr8:5901126-5905686
          | 20130731
          Length = 578

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 26 VEAFHKIYPHLQSVSAV-SVSGMHRTGYHFQPPRNWIN 62
          +EA H +Y +LQS+S+  S    +RT YHFQPP+NWIN
Sbjct: 24 IEATHHVYRNLQSLSSDDSFKQPYRTAYHFQPPKNWIN 61


>Medtr8g017410.3 | cell-wall invertase | HC | chr8:5901151-5905683
          | 20130731
          Length = 423

 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 26 VEAFHKIYPHLQSVSAV-SVSGMHRTGYHFQPPRNWIN 62
          +EA H +Y +LQS+S+  S    +RT YHFQPP+NWIN
Sbjct: 24 IEATHHVYRNLQSLSSDDSFKQPYRTAYHFQPPKNWIN 61