Miyakogusa Predicted Gene

Lj0g3v0085169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085169.1 tr|G7JV27|G7JV27_MEDTR HVA22-like protein a
OS=Medicago truncatula GN=MTR_4g093260 PE=4 SV=1,62.32,5e-18,seg,NULL;
TB2_DP1_HVA22,TB2/DP1/HVA22-related protein; HVA22-LIKE PROTEIN,NULL;
HVA22-LIKE PROTEINS,,CUFF.4482.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    78   1e-15
Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698...    72   1e-13
Medtr4g093280.1 | TB2/DP1, HVA22 family protein | LC | chr4:3699...    65   1e-11
Medtr4g093270.1 | TB2/DP1, HVA22 family protein | LC | chr4:3700...    50   4e-07

>Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36982943-36978372 | 20130731
          Length = 522

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/69 (52%), Positives = 41/69 (59%)

Query: 37  LISMAFLNLALKCFDHLAWPILALGYPMCASVRAIETDSIKEMRDXXXXXXXXXXXXXFE 96
           + S  FL L  KC  H AWP++AL YPMCASV+AIETDS  E +D             FE
Sbjct: 1   MASSWFLKLTFKCLYHFAWPLVALVYPMCASVQAIETDSYAETKDLISYWILLSLIYLFE 60

Query: 97  YAFMWLLQW 105
           YAFM LL W
Sbjct: 61  YAFMNLLLW 69


>Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36989578-36983804 | 20130731
          Length = 655

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 40/69 (57%)

Query: 37  LISMAFLNLALKCFDHLAWPILALGYPMCASVRAIETDSIKEMRDXXXXXXXXXXXXXFE 96
           + S   L L  K   H AWP+LAL YPMCAS++AIETDS  E+++             FE
Sbjct: 1   MASSFLLKLVFKSLHHFAWPLLALVYPMCASIQAIETDSDAEIKNIISYWILLSLIYLFE 60

Query: 97  YAFMWLLQW 105
           YAFM LL W
Sbjct: 61  YAFMSLLLW 69


>Medtr4g093280.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:36998363-36995528 | 20130731
          Length = 469

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 37/64 (57%)

Query: 42  FLNLALKCFDHLAWPILALGYPMCASVRAIETDSIKEMRDXXXXXXXXXXXXXFEYAFMW 101
            L LA KC  H AWP++AL YPM ASV AIETDS  E  D             FEYAFM 
Sbjct: 6   LLKLAFKCIHHFAWPLVALVYPMFASVLAIETDSYAETTDLISYWILLSLIYLFEYAFMR 65

Query: 102 LLQW 105
           LLQW
Sbjct: 66  LLQW 69


>Medtr4g093270.1 | TB2/DP1, HVA22 family protein | LC |
           chr4:37002156-37000248 | 20130731
          Length = 324

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 32/53 (60%)

Query: 53  LAWPILALGYPMCASVRAIETDSIKEMRDXXXXXXXXXXXXXFEYAFMWLLQW 105
           L+ P+LAL YPMCAS++AIETDS  + +D             FEYAFM  L W
Sbjct: 14  LSRPLLALVYPMCASIQAIETDSSAKTKDLISYWMLLSLIYLFEYAFMDFLLW 66