Miyakogusa Predicted Gene

Lj0g3v0084929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084929.1 Non Characterized Hit- tr|I3SW75|I3SW75_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,64.52,0.00000000002, ,CUFF.4470.1
         (64 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010420.1 | frigida-LIKE protein | LC | chr2:2359959-23644...    46   7e-06

>Medtr2g010420.1 | frigida-LIKE protein | LC | chr2:2359959-2364442
           | 20130731
          Length = 840

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 30/36 (83%)

Query: 1   MATLTNVLECISDNNLESGDLINEIEDRILELSKQK 36
           +A+L  VL+C+SDNN+ES DL+NEI  RI EL+++K
Sbjct: 803 IASLGTVLQCLSDNNMESVDLLNEIHGRIHELNREK 838