Miyakogusa Predicted Gene

Lj0g3v0084829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084829.1 tr|G7KT22|G7KT22_MEDTR 3-methyl-2-oxobutanoate
hydroxymethyltransferase OS=Medicago truncatula
GN=MT,83.48,0,PanB,Ketopantoate hydroxymethyltransferase; seg,NULL;
Pantoate_transf,Ketopantoate hydroxymethyltran,CUFF.4475.1
         (357 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028555.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   553   e-157
Medtr4g037305.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   446   e-125
Medtr4g037305.2 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   363   e-100
Medtr4g037245.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   257   1e-68
Medtr4g037315.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   192   3e-49
Medtr4g037275.1 | 3-methyl-2-oxobutanoate hydroxymethyltransfera...   119   3e-27

>Medtr8g028555.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr8:10911490-10914114 | 20130731
          Length = 350

 Score =  553 bits (1424), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 274/348 (78%), Positives = 298/348 (85%), Gaps = 17/348 (4%)

Query: 14  MACIVAKRRATTQCSSLLRCIRSMSNVPENTVYSGPISQNSNQRVTLAQLRQKH-NQCPV 72
           MA + +  +AT         +R+MSN+PENTVY+GP +QN  +RVTL+QL+QKH N  P+
Sbjct: 1   MAILRSMLKATKTLHRSSSLLRNMSNLPENTVYTGPTTQN--KRVTLSQLQQKHKNSQPI 58

Query: 73  --------------DRAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTP 118
                         D A IDICLVGDSA+MVVHG+DTTLPIT+DEMLVHCRAVARGAKTP
Sbjct: 59  TMVTAYDYPSAVHLDMAAIDICLVGDSASMVVHGHDTTLPITLDEMLVHCRAVARGAKTP 118

Query: 119 LLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGH 178
           LLVGDLPFGTYECS NQAVD AVRILKEG+MDAIKLEGGSPSRIVAAKAIVEAGIAV+GH
Sbjct: 119 LLVGDLPFGTYECSSNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGH 178

Query: 179 VGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLECXXXXXXXXXXXXLQ 238
           VGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCF+VVLEC            LQ
Sbjct: 179 VGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFAVVLECVPAPVTAAATAALQ 238

Query: 239 IPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVITKALVEYKEDV 298
           IPTIGIGAGP+CSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVI KAL+EYKEDV
Sbjct: 239 IPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDV 298

Query: 299 INGSFPDAQHSPYKISETDANGFLNELQRLGFDKAASAASDAVQKMVT 346
           +NGSFPDAQHSPYKISETDANGFLNELQ+LGFDKAASAAS+AVQKMV+
Sbjct: 299 MNGSFPDAQHSPYKISETDANGFLNELQKLGFDKAASAASEAVQKMVS 346


>Medtr4g037305.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13749976-13745180 | 20130731
          Length = 247

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/243 (88%), Positives = 224/243 (92%)

Query: 104 MLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIV 163
           MLVHCRAVARGAKTPLLVGDLPFGTYECS NQAVD  VR LKEG+MDAIKLEGGSPSRIV
Sbjct: 1   MLVHCRAVARGAKTPLLVGDLPFGTYECSSNQAVDTTVRNLKEGQMDAIKLEGGSPSRIV 60

Query: 164 AAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLE 223
           AAKAIVEAGIAV+GHVGLTPQAISVLGGFRPQGRNVASAVKVVET LALQEAGCF+VVLE
Sbjct: 61  AAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVASAVKVVETTLALQEAGCFAVVLE 120

Query: 224 CXXXXXXXXXXXXLQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARV 283
           C            LQIPTIGIGAGP+CSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARV
Sbjct: 121 CVPAPVAATATTALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARV 180

Query: 284 GDVITKALVEYKEDVINGSFPDAQHSPYKISETDANGFLNELQRLGFDKAASAASDAVQK 343
           GDVI KAL+EYKEDV+NGSFPDAQHSPYKISETDANGFLNELQ+LGFDKA SAAS+AVQK
Sbjct: 181 GDVINKALLEYKEDVMNGSFPDAQHSPYKISETDANGFLNELQKLGFDKAVSAASEAVQK 240

Query: 344 MVT 346
           MVT
Sbjct: 241 MVT 243


>Medtr4g037305.2 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13749020-13744142 | 20130731
          Length = 216

 Score =  363 bits (932), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/198 (88%), Positives = 183/198 (92%)

Query: 149 MDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVET 208
           MDAIKLEGGSPSRIVAAKAIVEAGIAV+GHVGLTPQAISVLGGFRPQGRNVASAVKVVET
Sbjct: 1   MDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRNVASAVKVVET 60

Query: 209 ALALQEAGCFSVVLECXXXXXXXXXXXXLQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPH 268
            LALQEAGCF+VVLEC            LQIPTIGIGAGP+CSGQVLVYHDLLGMLQHPH
Sbjct: 61  TLALQEAGCFAVVLECVPAPVAATATTALQIPTIGIGAGPYCSGQVLVYHDLLGMLQHPH 120

Query: 269 HAKVTPKFCKQYARVGDVITKALVEYKEDVINGSFPDAQHSPYKISETDANGFLNELQRL 328
           HAKVTPKFCKQYARVGDVI KAL+EYKEDV+NGSFPDAQHSPYKISETDANGFLNELQ+L
Sbjct: 121 HAKVTPKFCKQYARVGDVINKALLEYKEDVMNGSFPDAQHSPYKISETDANGFLNELQKL 180

Query: 329 GFDKAASAASDAVQKMVT 346
           GFDKA SAAS+AVQKMVT
Sbjct: 181 GFDKAVSAASEAVQKMVT 198


>Medtr4g037245.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13724675-13722825 | 20130731
          Length = 186

 Score =  257 bits (657), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 136/190 (71%), Positives = 146/190 (76%), Gaps = 19/190 (10%)

Query: 73  DRAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLPFGTYECS 132
           D   IDICLVGDSA+MVVH +DTTLPIT+DEMLVHCRAVARGAKTPLLVGDLPFGTYECS
Sbjct: 14  DMKAIDICLVGDSASMVVHDHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYECS 73

Query: 133 PNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGF 192
            NQAVD AVRILKEG+MDAIKLEGGSPSRIVAAKAIVEAGIAV+GHVGLTPQ +      
Sbjct: 74  SNQAVDTAVRILKEGQMDAIKLEGGSPSRIVAAKAIVEAGIAVIGHVGLTPQEL------ 127

Query: 193 RPQGRNVASAVKVVETALALQEAGCFSVVLECXXXXXXXXXXXXLQIPTIGIGAGPFCSG 252
                       V ET L LQEAGCF+VVLEC            LQIPTIGIGAGP CSG
Sbjct: 128 ------------VDETTLDLQEAGCFAVVLECVPAPVTATATTALQIPTIGIGAGPNCSG 175

Query: 253 QVLVY-HDLL 261
           Q + + HD+L
Sbjct: 176 QQISHNHDVL 185


>Medtr4g037315.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13750007-13750470 | 20130731
          Length = 109

 Score =  192 bits (489), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/101 (88%), Positives = 95/101 (94%)

Query: 249 FCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVITKALVEYKEDVINGSFPDAQH 308
           F   +VLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVI KAL+EYKEDV+NGSFPDAQH
Sbjct: 8   FSQFKVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVMNGSFPDAQH 67

Query: 309 SPYKISETDANGFLNELQRLGFDKAASAASDAVQKMVTAKS 349
           SPYKISETDANGFLNELQ+LGFDKAASAAS+AVQKMVT  +
Sbjct: 68  SPYKISETDANGFLNELQKLGFDKAASAASEAVQKMVTKST 108


>Medtr4g037275.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase
           | HC | chr4:13733110-13729241 | 20130731
          Length = 86

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/64 (85%), Positives = 59/64 (92%)

Query: 72  VDRAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLPFGTYEC 131
           +D A IDI LVGDSA+MVVH +DTTLPIT+DEMLVHCRAVARGAKTPLLVGDLPFGTYEC
Sbjct: 13  LDMAAIDISLVGDSASMVVHDHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYEC 72

Query: 132 SPNQ 135
           S NQ
Sbjct: 73  SSNQ 76