Miyakogusa Predicted Gene

Lj0g3v0084739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084739.1 Non Characterized Hit- tr|K3XQA6|K3XQA6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si004088,41.46,0.000000000001,seg,NULL,CUFF.4468.1
         (505 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034170.1 | hypothetical protein | HC | chr1:12396173-1239...   662   0.0  
Medtr1g034170.2 | hypothetical protein | HC | chr1:12393997-1239...   538   e-153
Medtr1g034170.3 | hypothetical protein | HC | chr1:12393997-1239...   496   e-140

>Medtr1g034170.1 | hypothetical protein | HC |
           chr1:12396173-12390213 | 20130731
          Length = 508

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/479 (72%), Positives = 377/479 (78%), Gaps = 23/479 (4%)

Query: 44  FLSDLQKAAAVAAEEISRNAAAVAQTASKSIAELE---KXXXXXXXXXXXXXXXXXXXXX 100
            LSDLQKAAAVAAEEISRNAA+VA+TASKSIAEL+   +                     
Sbjct: 36  ILSDLQKAAAVAAEEISRNAASVAETASKSIAELQIAAEDSESSKEDVVDEEAEKESDDE 95

Query: 101 XXXXXXXXXALDKLEKASDDSLLSQGLKVFDNSVETFASGAWSALGNALKGGTDLVHRL- 159
                    ALDKLEKAS+DSLLSQGLKVFDNSVETFASGAWSALGNA +GG++LVH+L 
Sbjct: 96  SDAAPLRKSALDKLEKASEDSLLSQGLKVFDNSVETFASGAWSALGNAWRGGSELVHKLE 155

Query: 160 ------------DRPGAAGSNAPSLLETGKAFTAKGMQVLEYVGKETLDLLISETGIEVE 207
                       D PG  GSNAPSLLETGKAFTAKGMQVLEYVGKET+DLLISETGIE+E
Sbjct: 156 NSASNLGGSVQHDGPGTPGSNAPSLLETGKAFTAKGMQVLEYVGKETMDLLISETGIEIE 215

Query: 208 KAKKEGEKHNEEDQLSEEVTFDRCFYIYGGPEQLEELEALSSHYALLFNRRKAKLSAEQK 267
           KA+KEG+  ++EDQLSEEVTFDRCFYIYGGPEQLEELEAL+SH+ALLFNRRKAKLSAEQK
Sbjct: 216 KARKEGDDQSDEDQLSEEVTFDRCFYIYGGPEQLEELEALASHHALLFNRRKAKLSAEQK 275

Query: 268 SVFDGKLKEVQQIFNLSTEIDRSSVDSDKGKTIKKGNEGSSDEMKNLHDSSVGKXXXXXX 327
           SVFDGKLKEVQQIF+LS EID +  DS+KGKTIKKGN GS DE+KNLHDSSVGK      
Sbjct: 276 SVFDGKLKEVQQIFDLSIEID-AGADSNKGKTIKKGNAGSGDEIKNLHDSSVGK----AA 330

Query: 328 XXXXGFTNVLTGLAVNDIIQRTTSRLESLHSEGVHRLSEMCCLAVSQLLMFGKSIISHAN 387
               GFTN L GLA NDIIQRTT RL+SLHSEGVHRLSEMCC AVSQLL FGKSIIS AN
Sbjct: 331 EMAAGFTNALAGLAANDIIQRTTGRLDSLHSEGVHRLSEMCCFAVSQLLTFGKSIISLAN 390

Query: 388 KTGXXXXXXXXXXXXXWPEDVSAKAKIIRINAQAVIGYVEAVSNSFITGISDVNEAYQAA 447
           KT              WPEDVSAKAKIIRINAQ +IGY+EAVS SF TGISDV EAYQAA
Sbjct: 391 KT-EDEEVDDDKTNIEWPEDVSAKAKIIRINAQTMIGYLEAVSTSFTTGISDVTEAYQAA 449

Query: 448 IKGVTAESHTGAP-KTSVQDKSKAFSEHLKADQTTAIRKIQDGMQFLAHVVLSTSMSAA 505
           IKGVTAES T  P KTSVQ+K+ AFSEHL+ADQ TAI KIQDG+QFLAHVVLSTSM+ A
Sbjct: 450 IKGVTAESPTVVPKKTSVQEKASAFSEHLQADQITAISKIQDGVQFLAHVVLSTSMNVA 508


>Medtr1g034170.2 | hypothetical protein | HC |
           chr1:12393997-12390213 | 20130731
          Length = 356

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/347 (78%), Positives = 293/347 (84%), Gaps = 7/347 (2%)

Query: 160 DRPGAAGSNAPSLLETGKAFTAKGMQVLEYVGKETLDLLISETGIEVEKAKKEGEKHNEE 219
           D PG  GSNAPSLLETGKAFTAKGMQVLEYVGKET+DLLISETGIE+EKA+KEG+  ++E
Sbjct: 16  DGPGTPGSNAPSLLETGKAFTAKGMQVLEYVGKETMDLLISETGIEIEKARKEGDDQSDE 75

Query: 220 DQLSEEVTFDRCFYIYGGPEQLEELEALSSHYALLFNRRKAKLSAEQKSVFDGKLKEVQQ 279
           DQLSEEVTFDRCFYIYGGPEQLEELEAL+SH+ALLFNRRKAKLSAEQKSVFDGKLKEVQQ
Sbjct: 76  DQLSEEVTFDRCFYIYGGPEQLEELEALASHHALLFNRRKAKLSAEQKSVFDGKLKEVQQ 135

Query: 280 IFNLSTEIDRSSVDSDKGKTIKKGNEGSSDEMKNLHDSSVGKXXXXXXXXXXGFTNVLTG 339
           IF+LS EID +  DS+KGKTIKKGN GS DE+KNLHDSSVGK          GFTN L G
Sbjct: 136 IFDLSIEID-AGADSNKGKTIKKGNAGSGDEIKNLHDSSVGK----AAEMAAGFTNALAG 190

Query: 340 LAVNDIIQRTTSRLESLHSEGVHRLSEMCCLAVSQLLMFGKSIISHANKTGXXXXXXXXX 399
           LA NDIIQRTT RL+SLHSEGVHRLSEMCC AVSQLL FGKSIIS ANKT          
Sbjct: 191 LAANDIIQRTTGRLDSLHSEGVHRLSEMCCFAVSQLLTFGKSIISLANKT-EDEEVDDDK 249

Query: 400 XXXXWPEDVSAKAKIIRINAQAVIGYVEAVSNSFITGISDVNEAYQAAIKGVTAESHTGA 459
               WPEDVSAKAKIIRINAQ +IGY+EAVS SF TGISDV EAYQAAIKGVTAES T  
Sbjct: 250 TNIEWPEDVSAKAKIIRINAQTMIGYLEAVSTSFTTGISDVTEAYQAAIKGVTAESPTVV 309

Query: 460 P-KTSVQDKSKAFSEHLKADQTTAIRKIQDGMQFLAHVVLSTSMSAA 505
           P KTSVQ+K+ AFSEHL+ADQ TAI KIQDG+QFLAHVVLSTSM+ A
Sbjct: 310 PKKTSVQEKASAFSEHLQADQITAISKIQDGVQFLAHVVLSTSMNVA 356


>Medtr1g034170.3 | hypothetical protein | HC |
           chr1:12393997-12390213 | 20130731
          Length = 317

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/323 (78%), Positives = 272/323 (84%), Gaps = 7/323 (2%)

Query: 184 MQVLEYVGKETLDLLISETGIEVEKAKKEGEKHNEEDQLSEEVTFDRCFYIYGGPEQLEE 243
           MQVLEYVGKET+DLLISETGIE+EKA+KEG+  ++EDQLSEEVTFDRCFYIYGGPEQLEE
Sbjct: 1   MQVLEYVGKETMDLLISETGIEIEKARKEGDDQSDEDQLSEEVTFDRCFYIYGGPEQLEE 60

Query: 244 LEALSSHYALLFNRRKAKLSAEQKSVFDGKLKEVQQIFNLSTEIDRSSVDSDKGKTIKKG 303
           LEAL+SH+ALLFNRRKAKLSAEQKSVFDGKLKEVQQIF+LS EID +  DS+KGKTIKKG
Sbjct: 61  LEALASHHALLFNRRKAKLSAEQKSVFDGKLKEVQQIFDLSIEID-AGADSNKGKTIKKG 119

Query: 304 NEGSSDEMKNLHDSSVGKXXXXXXXXXXGFTNVLTGLAVNDIIQRTTSRLESLHSEGVHR 363
           N GS DE+KNLHDSSVGK          GFTN L GLA NDIIQRTT RL+SLHSEGVHR
Sbjct: 120 NAGSGDEIKNLHDSSVGK----AAEMAAGFTNALAGLAANDIIQRTTGRLDSLHSEGVHR 175

Query: 364 LSEMCCLAVSQLLMFGKSIISHANKTGXXXXXXXXXXXXXWPEDVSAKAKIIRINAQAVI 423
           LSEMCC AVSQLL FGKSIIS ANKT              WPEDVSAKAKIIRINAQ +I
Sbjct: 176 LSEMCCFAVSQLLTFGKSIISLANKT-EDEEVDDDKTNIEWPEDVSAKAKIIRINAQTMI 234

Query: 424 GYVEAVSNSFITGISDVNEAYQAAIKGVTAESHTGAP-KTSVQDKSKAFSEHLKADQTTA 482
           GY+EAVS SF TGISDV EAYQAAIKGVTAES T  P KTSVQ+K+ AFSEHL+ADQ TA
Sbjct: 235 GYLEAVSTSFTTGISDVTEAYQAAIKGVTAESPTVVPKKTSVQEKASAFSEHLQADQITA 294

Query: 483 IRKIQDGMQFLAHVVLSTSMSAA 505
           I KIQDG+QFLAHVVLSTSM+ A
Sbjct: 295 ISKIQDGVQFLAHVVLSTSMNVA 317