Miyakogusa Predicted Gene

Lj0g3v0084279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084279.1 Non Characterized Hit- tr|K3Y9L2|K3Y9L2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010904,32.93,1e-18,seg,NULL,CUFF.4418.1
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g030860.4 | hypothetical protein | HC | chr1:10802509-1079...   183   2e-46
Medtr1g030860.1 | hypothetical protein | HC | chr1:10802509-1079...   183   2e-46
Medtr1g030860.2 | hypothetical protein | HC | chr1:10802509-1079...   183   2e-46
Medtr1g030860.3 | hypothetical protein | HC | chr1:10802509-1079...   183   2e-46
Medtr6g012760.1 | transmembrane protein, putative | HC | chr6:39...   159   2e-39
Medtr8g077030.1 | SAM-dependent carboxyl methyltransferase | LC ...   155   3e-38

>Medtr1g030860.4 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 24/251 (9%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCILP---MNTHPRSRIVMKLREKPSFGFKCLP 57
           MN+AQVTA+Q GICVKN        +  C+L    +N+ PR R +  +R+KP FG     
Sbjct: 1   MNSAQVTAFQLGICVKN--------SKSCVLQKSIVNSFPRIRSI-SIRDKPLFG----- 46

Query: 58  ILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGEYFXXX 117
            LKS KPLR   AGG+GM  ++DENSPW+SI  AM+KFKGQ IE+VLR+QIQKGEY    
Sbjct: 47  -LKSLKPLR---AGGKGMSENSDENSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNG 102

Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYILTGEE 177
                                           E   +  Q I A+   + LYIY++ G+E
Sbjct: 103 GSGVKPPGGGGGEGGSGGGSPNGPGGSDD---EESYDTRQTIFASGALLSLYIYLIMGKE 159

Query: 178 LTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAIMNTPTWWYDP 237
           L +   D+++++ G  ++ R+K  +V+ G++Y+S   +K  DE +LE+AI+NTPTWWYDP
Sbjct: 160 LLRTIFDFLRFIVGLGKTSRIKRILVRLGKLYKSTKRRKITDEHFLEKAILNTPTWWYDP 219

Query: 238 EDLREALRNSY 248
           +D R A++N Y
Sbjct: 220 QDFRTAVKNYY 230


>Medtr1g030860.1 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 24/251 (9%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCILP---MNTHPRSRIVMKLREKPSFGFKCLP 57
           MN+AQVTA+Q GICVKN        +  C+L    +N+ PR R +  +R+KP FG     
Sbjct: 1   MNSAQVTAFQLGICVKN--------SKSCVLQKSIVNSFPRIRSI-SIRDKPLFG----- 46

Query: 58  ILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGEYFXXX 117
            LKS KPLR   AGG+GM  ++DENSPW+SI  AM+KFKGQ IE+VLR+QIQKGEY    
Sbjct: 47  -LKSLKPLR---AGGKGMSENSDENSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNG 102

Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYILTGEE 177
                                           E   +  Q I A+   + LYIY++ G+E
Sbjct: 103 GSGVKPPGGGGGEGGSGGGSPNGPGGSDD---EESYDTRQTIFASGALLSLYIYLIMGKE 159

Query: 178 LTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAIMNTPTWWYDP 237
           L +   D+++++ G  ++ R+K  +V+ G++Y+S   +K  DE +LE+AI+NTPTWWYDP
Sbjct: 160 LLRTIFDFLRFIVGLGKTSRIKRILVRLGKLYKSTKRRKITDEHFLEKAILNTPTWWYDP 219

Query: 238 EDLREALRNSY 248
           +D R A++N Y
Sbjct: 220 QDFRTAVKNYY 230


>Medtr1g030860.2 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 24/251 (9%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCILP---MNTHPRSRIVMKLREKPSFGFKCLP 57
           MN+AQVTA+Q GICVKN        +  C+L    +N+ PR R +  +R+KP FG     
Sbjct: 1   MNSAQVTAFQLGICVKN--------SKSCVLQKSIVNSFPRIRSI-SIRDKPLFG----- 46

Query: 58  ILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGEYFXXX 117
            LKS KPLR   AGG+GM  ++DENSPW+SI  AM+KFKGQ IE+VLR+QIQKGEY    
Sbjct: 47  -LKSLKPLR---AGGKGMSENSDENSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNG 102

Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYILTGEE 177
                                           E   +  Q I A+   + LYIY++ G+E
Sbjct: 103 GSGVKPPGGGGGEGGSGGGSPNGPGGSDD---EESYDTRQTIFASGALLSLYIYLIMGKE 159

Query: 178 LTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAIMNTPTWWYDP 237
           L +   D+++++ G  ++ R+K  +V+ G++Y+S   +K  DE +LE+AI+NTPTWWYDP
Sbjct: 160 LLRTIFDFLRFIVGLGKTSRIKRILVRLGKLYKSTKRRKITDEHFLEKAILNTPTWWYDP 219

Query: 238 EDLREALRNSY 248
           +D R A++N Y
Sbjct: 220 QDFRTAVKNYY 230


>Medtr1g030860.3 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 24/251 (9%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCILP---MNTHPRSRIVMKLREKPSFGFKCLP 57
           MN+AQVTA+Q GICVKN        +  C+L    +N+ PR R +  +R+KP FG     
Sbjct: 1   MNSAQVTAFQLGICVKN--------SKSCVLQKSIVNSFPRIRSI-SIRDKPLFG----- 46

Query: 58  ILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGEYFXXX 117
            LKS KPLR   AGG+GM  ++DENSPW+SI  AM+KFKGQ IE+VLR+QIQKGEY    
Sbjct: 47  -LKSLKPLR---AGGKGMSENSDENSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNG 102

Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYILTGEE 177
                                           E   +  Q I A+   + LYIY++ G+E
Sbjct: 103 GSGVKPPGGGGGEGGSGGGSPNGPGGSDD---EESYDTRQTIFASGALLSLYIYLIMGKE 159

Query: 178 LTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAIMNTPTWWYDP 237
           L +   D+++++ G  ++ R+K  +V+ G++Y+S   +K  DE +LE+AI+NTPTWWYDP
Sbjct: 160 LLRTIFDFLRFIVGLGKTSRIKRILVRLGKLYKSTKRRKITDEHFLEKAILNTPTWWYDP 219

Query: 238 EDLREALRNSY 248
           +D R A++N Y
Sbjct: 220 QDFRTAVKNYY 230


>Medtr6g012760.1 | transmembrane protein, putative | HC |
           chr6:3957866-3956581 | 20130731
          Length = 255

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 132/267 (49%), Gaps = 41/267 (15%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCILPMNTHPRSRIVMKLREKPSFGFKCL---- 56
           MN  QV A  P I V+   Q H   +TP  L MN +P SR  +  R K S G  C+    
Sbjct: 1   MNAIQVAASNPAIYVRKNYQPHHFLSTPKGLSMNANPLSRTFLIPRAKLSSGLYCVRQSA 60

Query: 57  -----------------PILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQS 99
                            P+LKS+KP  +C AGG+GMM DN E+S  KS+E+AM+      
Sbjct: 61  TTAPVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMM-DNSEDSQRKSLEEAMKS----- 114

Query: 100 IEDVLRQQIQKGEYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVI 159
               L+++IQKGEY                                     M DE  Q++
Sbjct: 115 ----LQEKIQKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGST------GGMSDETAQIV 164

Query: 160 LATLGFIFLYIYILTGEELTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVD 219
            AT+GF+F+YIY++ G ELTKLARD+IKYL GG+QSVRLK A  K  + Y+ +T + EVD
Sbjct: 165 FATIGFMFVYIYVINGVELTKLARDFIKYLLGGTQSVRLKRASYKCSRFYKKITGQNEVD 224

Query: 220 EFWLERAIMNTPTWWYDPEDLREALRN 246
           E  LE      P  W   +  R+ LRN
Sbjct: 225 EDGLETG----PLRWNIADFYRDVLRN 247


>Medtr8g077030.1 | SAM-dependent carboxyl methyltransferase | LC |
           chr8:32705244-32700574 | 20130731
          Length = 525

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 131/259 (50%), Gaps = 40/259 (15%)

Query: 10  QPGICVKNISQLHQ-LDTTPCILPMNTHPRSRIVMKLREKPSFGF--------------- 53
            P  C ++ +  H+ +  TP  L MN +P S   +  R KPS G                
Sbjct: 277 HPSCCNQSCNLCHKKISATPLGLSMNANPLSSSFIIPRAKPSSGLECVRQSAVTAPTLKV 336

Query: 54  ------KCLPILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQ 107
                 +C+P+LKSRKP  +C AGG+GMM DN E S  KS+E+AM+          L+++
Sbjct: 337 YPRNQTQCVPVLKSRKPCHVCLAGGKGMM-DNSEFSQRKSLEEAMKS---------LQEK 386

Query: 108 IQKGEYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIF 167
           IQKGEY                                     M  E LQ++ AT+GFIF
Sbjct: 387 IQKGEYSGGSGSKPPGGRGSGSGGGRGSSGGSEEGSF----GGMSVETLQIVFATIGFIF 442

Query: 168 LYIYILTGEELTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAI 227
           +YIY++ G E TKLARD+IKYL GG+QSVRLK A  K  + Y+ +T +KEVDE  LE+A 
Sbjct: 443 VYIYVINGVEFTKLARDFIKYLLGGAQSVRLKRASYKLARFYKKVTRQKEVDENGLEKA- 501

Query: 228 MNTPTWWYDPEDLREALRN 246
              PT W   +  R+ LRN
Sbjct: 502 ---PTQWNIADFYRDVLRN 517