Miyakogusa Predicted Gene

Lj0g3v0083759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083759.1 Non Characterized Hit- tr|C4J972|C4J972_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.39,0.0000000000001,seg,NULL,CUFF.4396.1
         (540 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g094760.1 | CPR5, putative | HC | chr3:43243725-43247606 |...   687   0.0  
Medtr3g094760.3 | CPR5, putative | HC | chr3:43243725-43247486 |...   538   e-153
Medtr3g094760.5 | CPR5, putative | HC | chr3:43245096-43247606 |...   538   e-153
Medtr3g094760.4 | CPR5, putative | HC | chr3:43243725-43247603 |...   413   e-115
Medtr3g094760.2 | CPR5, putative | HC | chr3:43243725-43247486 |...   410   e-114
Medtr7g109250.1 | RING zinc finger protein, putative | HC | chr7...    72   2e-12

>Medtr3g094760.1 | CPR5, putative | HC | chr3:43243725-43247606 |
           20130731
          Length = 549

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/463 (69%), Positives = 383/463 (82%), Gaps = 2/463 (0%)

Query: 78  GFPLGMSFAAVLAQVLYRRDAAAESMSPSHLSSMCTSAIKESLASVFGDKLDGLTRNFEE 137
           GFPLGMS AAV+AQVLYRRDAAAE MSP HLSSMCTSAI+ESL+SVFGDKLDGLTRNFE+
Sbjct: 74  GFPLGMSVAAVMAQVLYRRDAAAEGMSPDHLSSMCTSAIQESLSSVFGDKLDGLTRNFEQ 133

Query: 138 SFDSTLSTLRLIYETSTRNERNKFDNMKMEIPNTDLSKGDCSSDVVSEDGHSGPISRA-- 195
           SFDSTLSTLRLIYE+   NE NK +NM++EIP++   +GDCS D+  E+   G +S A  
Sbjct: 134 SFDSTLSTLRLIYESPASNEGNKLNNMRLEIPSSKFIRGDCSRDIAIEEDQPGLLSHAHA 193

Query: 196 KIQDQSNSPEEVRDNFHMDSVSRGLTLHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVE 255
           +I DQSN  EEV DNFHM+SV+R + LHG+SNQ+VCF+P SSG+++NNP++ST+EKSI+E
Sbjct: 194 EIVDQSNRREEVGDNFHMESVTRDVALHGQSNQMVCFAPPSSGALVNNPVISTFEKSIME 253

Query: 256 QCRSNELKTIELGLTMKKLQLKKTELALHYDLNNLERSKLAMGASKASFRAEKFKNQLED 315
           QCRSN+LKT+ELGLTMKK++LK+TELAL YDLN+L+RSKLA+  SK SF+AEKFK QLED
Sbjct: 254 QCRSNDLKTVELGLTMKKMKLKETELALRYDLNDLQRSKLAVDISKTSFKAEKFKTQLED 313

Query: 316 MRHGELNKKCIDCLIAGLFIMXXXXXXXXXXXXXKQITEATETCTPLEESSSWWTPKSVV 375
            R+GELNKKCIDCLIAGLFIM             ++I EA E+CTP EESS WWTPKSV 
Sbjct: 314 TRYGELNKKCIDCLIAGLFIMSSSLFYGAYVYNFERINEAAESCTPEEESSYWWTPKSVT 373

Query: 376 WFNSGLHVLWCQVQVISRMLFGVIMIFAVAYLLIQRSAASSTQTMPVTFILLMLGIGCGY 435
           W NS +HV  CQV+V+SRM+FG +MI  VAYLL QRSA  S+QTMPVTFI+LMLGIGCGY
Sbjct: 374 WLNSSVHVFLCQVRVVSRMVFGFLMIIVVAYLLFQRSATLSSQTMPVTFIILMLGIGCGY 433

Query: 436 CGKLCVDTLGGSGYVWLSYWEILCLLHFLSIGFTSILYSILHGPLTKLQSSKENTIFPYW 495
           CG +C+DTLGGSGY+WL YWEILCL+HFLSI +TS LY+ILHGP+T LQ+ K + I  +W
Sbjct: 434 CGTMCIDTLGGSGYIWLLYWEILCLVHFLSICWTSALYAILHGPITTLQTKKGDPIVQHW 493

Query: 496 IRRILFYGTLLVVLPLCCGFLPFASIGQWKEYFMLKVLDFYGS 538
           IRR LFY  LLVVLPLCCG LPFAS+GQWK++FM KV D  GS
Sbjct: 494 IRRFLFYAILLVVLPLCCGLLPFASLGQWKDHFMSKVFDDQGS 536


>Medtr3g094760.3 | CPR5, putative | HC | chr3:43243725-43247486 |
           20130731
          Length = 390

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 250/377 (66%), Positives = 305/377 (80%), Gaps = 2/377 (0%)

Query: 164 MKMEIPNTDLSKGDCSSDVVSEDGHSGPISRA--KIQDQSNSPEEVRDNFHMDSVSRGLT 221
           M++EIP++   +GDCS D+  E+   G +S A  +I DQSN  EEV DNFHM+SV+R + 
Sbjct: 1   MRLEIPSSKFIRGDCSRDIAIEEDQPGLLSHAHAEIVDQSNRREEVGDNFHMESVTRDVA 60

Query: 222 LHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVEQCRSNELKTIELGLTMKKLQLKKTEL 281
           LHG+SNQ+VCF+P SSG+++NNP++ST+EKSI+EQCRSN+LKT+ELGLTMKK++LK+TEL
Sbjct: 61  LHGQSNQMVCFAPPSSGALVNNPVISTFEKSIMEQCRSNDLKTVELGLTMKKMKLKETEL 120

Query: 282 ALHYDLNNLERSKLAMGASKASFRAEKFKNQLEDMRHGELNKKCIDCLIAGLFIMXXXXX 341
           AL YDLN+L+RSKLA+  SK SF+AEKFK QLED R+GELNKKCIDCLIAGLFIM     
Sbjct: 121 ALRYDLNDLQRSKLAVDISKTSFKAEKFKTQLEDTRYGELNKKCIDCLIAGLFIMSSSLF 180

Query: 342 XXXXXXXXKQITEATETCTPLEESSSWWTPKSVVWFNSGLHVLWCQVQVISRMLFGVIMI 401
                   ++I EA E+CTP EESS WWTPKSV W NS +HV  CQV+V+SRM+FG +MI
Sbjct: 181 YGAYVYNFERINEAAESCTPEEESSYWWTPKSVTWLNSSVHVFLCQVRVVSRMVFGFLMI 240

Query: 402 FAVAYLLIQRSAASSTQTMPVTFILLMLGIGCGYCGKLCVDTLGGSGYVWLSYWEILCLL 461
             VAYLL QRSA  S+QTMPVTFI+LMLGIGCGYCG +C+DTLGGSGY+WL YWEILCL+
Sbjct: 241 IVVAYLLFQRSATLSSQTMPVTFIILMLGIGCGYCGTMCIDTLGGSGYIWLLYWEILCLV 300

Query: 462 HFLSIGFTSILYSILHGPLTKLQSSKENTIFPYWIRRILFYGTLLVVLPLCCGFLPFASI 521
           HFLSI +TS LY+ILHGP+T LQ+ K + I  +WIRR LFY  LLVVLPLCCG LPFAS+
Sbjct: 301 HFLSICWTSALYAILHGPITTLQTKKGDPIVQHWIRRFLFYAILLVVLPLCCGLLPFASL 360

Query: 522 GQWKEYFMLKVLDFYGS 538
           GQWK++FM KV D  GS
Sbjct: 361 GQWKDHFMSKVFDDQGS 377


>Medtr3g094760.5 | CPR5, putative | HC | chr3:43245096-43247606 |
           20130731
          Length = 390

 Score =  538 bits (1387), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 250/377 (66%), Positives = 305/377 (80%), Gaps = 2/377 (0%)

Query: 164 MKMEIPNTDLSKGDCSSDVVSEDGHSGPISRA--KIQDQSNSPEEVRDNFHMDSVSRGLT 221
           M++EIP++   +GDCS D+  E+   G +S A  +I DQSN  EEV DNFHM+SV+R + 
Sbjct: 1   MRLEIPSSKFIRGDCSRDIAIEEDQPGLLSHAHAEIVDQSNRREEVGDNFHMESVTRDVA 60

Query: 222 LHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVEQCRSNELKTIELGLTMKKLQLKKTEL 281
           LHG+SNQ+VCF+P SSG+++NNP++ST+EKSI+EQCRSN+LKT+ELGLTMKK++LK+TEL
Sbjct: 61  LHGQSNQMVCFAPPSSGALVNNPVISTFEKSIMEQCRSNDLKTVELGLTMKKMKLKETEL 120

Query: 282 ALHYDLNNLERSKLAMGASKASFRAEKFKNQLEDMRHGELNKKCIDCLIAGLFIMXXXXX 341
           AL YDLN+L+RSKLA+  SK SF+AEKFK QLED R+GELNKKCIDCLIAGLFIM     
Sbjct: 121 ALRYDLNDLQRSKLAVDISKTSFKAEKFKTQLEDTRYGELNKKCIDCLIAGLFIMSSSLF 180

Query: 342 XXXXXXXXKQITEATETCTPLEESSSWWTPKSVVWFNSGLHVLWCQVQVISRMLFGVIMI 401
                   ++I EA E+CTP EESS WWTPKSV W NS +HV  CQV+V+SRM+FG +MI
Sbjct: 181 YGAYVYNFERINEAAESCTPEEESSYWWTPKSVTWLNSSVHVFLCQVRVVSRMVFGFLMI 240

Query: 402 FAVAYLLIQRSAASSTQTMPVTFILLMLGIGCGYCGKLCVDTLGGSGYVWLSYWEILCLL 461
             VAYLL QRSA  S+QTMPVTFI+LMLGIGCGYCG +C+DTLGGSGY+WL YWEILCL+
Sbjct: 241 IVVAYLLFQRSATLSSQTMPVTFIILMLGIGCGYCGTMCIDTLGGSGYIWLLYWEILCLV 300

Query: 462 HFLSIGFTSILYSILHGPLTKLQSSKENTIFPYWIRRILFYGTLLVVLPLCCGFLPFASI 521
           HFLSI +TS LY+ILHGP+T LQ+ K + I  +WIRR LFY  LLVVLPLCCG LPFAS+
Sbjct: 301 HFLSICWTSALYAILHGPITTLQTKKGDPIVQHWIRRFLFYAILLVVLPLCCGLLPFASL 360

Query: 522 GQWKEYFMLKVLDFYGS 538
           GQWK++FM KV D  GS
Sbjct: 361 GQWKDHFMSKVFDDQGS 377


>Medtr3g094760.4 | CPR5, putative | HC | chr3:43243725-43247603 |
           20130731
          Length = 391

 Score =  413 bits (1062), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/316 (64%), Positives = 249/316 (78%), Gaps = 11/316 (3%)

Query: 78  GFPLGMSFAAVLAQVLYRRDAAAESMSPSHLSSMCTSAIKESLASVFGDKLDGLTRNFEE 137
           GFPLGMS AAV+AQVLYRRDAAAE MSP HLSSMCTSAI+ESL+SVFGDKLDGLTRNFE+
Sbjct: 74  GFPLGMSVAAVMAQVLYRRDAAAEGMSPDHLSSMCTSAIQESLSSVFGDKLDGLTRNFEQ 133

Query: 138 SFDSTLSTLRLIYETSTRNERNKFDNMKMEIPNTDLSKGDCSSDVVSEDGHSGPISRA-- 195
           SFDSTLSTLRLIYE+   NE NK +NM++EIP++   +GDCS D+  E+   G +S A  
Sbjct: 134 SFDSTLSTLRLIYESPASNEGNKLNNMRLEIPSSKFIRGDCSRDIAIEEDQPGLLSHAHA 193

Query: 196 KIQDQSNSPEEVRDNFHMDSVSRGLTLHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVE 255
           +I DQSN  EEV DNFHM+SV+R + LHG+SNQ+VCF+P SSG+++NNP++ST+EKSI+E
Sbjct: 194 EIVDQSNRREEVGDNFHMESVTRDVALHGQSNQMVCFAPPSSGALVNNPVISTFEKSIME 253

Query: 256 QCRSNELKTIELGLTMKKLQLKKTELALHYDLNNLERSKLAMGASKASFRAEKFKNQLED 315
           QCRSN+LKT+ELGLTMKK++LK+TELAL YDLN+L+RSKLA+  SK SF+AEKFK QLED
Sbjct: 254 QCRSNDLKTVELGLTMKKMKLKETELALRYDLNDLQRSKLAVDISKTSFKAEKFKTQLED 313

Query: 316 MRHGELNKKCIDCLIAGLFIMXXXXXXXXXXXXXKQITEATETCTPLEESSSWWTPKSVV 375
            R+GELNKKCIDCLIAGLFIM             ++I EA E+CTP E         S++
Sbjct: 314 TRYGELNKKCIDCLIAGLFIMSSSLFYGAYVYNFERINEAAESCTPEE--------ASII 365

Query: 376 WFNSGLHVLWCQVQVI 391
           +F S L   +  +Q I
Sbjct: 366 FFYS-LFQFYSMLQAI 380


>Medtr3g094760.2 | CPR5, putative | HC | chr3:43243725-43247486 |
           20130731
          Length = 402

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/290 (67%), Positives = 239/290 (82%), Gaps = 2/290 (0%)

Query: 78  GFPLGMSFAAVLAQVLYRRDAAAESMSPSHLSSMCTSAIKESLASVFGDKLDGLTRNFEE 137
           GFPLGMS AAV+AQVLYRRDAAAE MSP HLSSMCTSAI+ESL+SVFGDKLDGLTRNFE+
Sbjct: 74  GFPLGMSVAAVMAQVLYRRDAAAEGMSPDHLSSMCTSAIQESLSSVFGDKLDGLTRNFEQ 133

Query: 138 SFDSTLSTLRLIYETSTRNERNKFDNMKMEIPNTDLSKGDCSSDVVSEDGHSGPISRA-- 195
           SFDSTLSTLRLIYE+   NE NK +NM++EIP++   +GDCS D+  E+   G +S A  
Sbjct: 134 SFDSTLSTLRLIYESPASNEGNKLNNMRLEIPSSKFIRGDCSRDIAIEEDQPGLLSHAHA 193

Query: 196 KIQDQSNSPEEVRDNFHMDSVSRGLTLHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVE 255
           +I DQSN  EEV DNFHM+SV+R + LHG+SNQ+VCF+P SSG+++NNP++ST+EKSI+E
Sbjct: 194 EIVDQSNRREEVGDNFHMESVTRDVALHGQSNQMVCFAPPSSGALVNNPVISTFEKSIME 253

Query: 256 QCRSNELKTIELGLTMKKLQLKKTELALHYDLNNLERSKLAMGASKASFRAEKFKNQLED 315
           QCRSN+LKT+ELGLTMKK++LK+TELAL YDLN+L+RSKLA+  SK SF+AEKFK QLED
Sbjct: 254 QCRSNDLKTVELGLTMKKMKLKETELALRYDLNDLQRSKLAVDISKTSFKAEKFKTQLED 313

Query: 316 MRHGELNKKCIDCLIAGLFIMXXXXXXXXXXXXXKQITEATETCTPLEES 365
            R+GELNKKCIDCLIAGLFIM             ++I EA E+CTP E +
Sbjct: 314 TRYGELNKKCIDCLIAGLFIMSSSLFYGAYVYNFERINEAAESCTPEEHA 363


>Medtr7g109250.1 | RING zinc finger protein, putative | HC |
           chr7:44660066-44664150 | 20130731
          Length = 387

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%)

Query: 475 ILHGPLTKLQSSKENTIFPYWIRRILFYGTLLVVLPLCCGFLPFASIGQWKEYFMLKVLD 534
           +LHG +   Q S  + I PYW RR+ FY TLLV LPL  G  PFA++ QW  +F+ K+  
Sbjct: 1   MLHGSVIVSQKSNRHIILPYWFRRLWFYATLLVFLPLIGGLAPFAALSQWNNHFLFKLFT 60

Query: 535 FYGSEV 540
              SE 
Sbjct: 61  MEDSEA 66