Miyakogusa Predicted Gene

Lj0g3v0083539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083539.1 tr|G7IV60|G7IV60_MEDTR Metal tolerance protein
OS=Medicago truncatula GN=MTR_3g062610 PE=4 SV=1,44,0.00006,
,CUFF.4374.1
         (74 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g062610.1 | Mn-specific cation diffusion facilitator trans...    52   2e-07
Medtr3g062610.2 | Mn-specific cation diffusion facilitator trans...    52   2e-07

>Medtr3g062610.1 | Mn-specific cation diffusion facilitator
          transporter MTP8.1 | HC | chr3:28297483-28294352 |
          20130731
          Length = 403

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 12/75 (16%)

Query: 5  MNENSGPNPTEPLLFENGGGSTTEIVDDGQRDEVSPQSTHRAAFFGLLPHKVRSCIVTDG 64
          M+ NSG +PT PLL     G TT+I+   +R+ V   ++ R+AF   LP KVRSC+ ++ 
Sbjct: 1  MDGNSGSDPTRPLLSAIHDGQTTKII---RRNSV---NSLRSAFLSTLPDKVRSCLDSES 54

Query: 65 PPFDV-----TALSE 74
           PFDV     TALS+
Sbjct: 55 -PFDVDLSNATALSQ 68


>Medtr3g062610.2 | Mn-specific cation diffusion facilitator
          transporter MTP8.1 | HC | chr3:28297483-28295305 |
          20130731
          Length = 330

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 12/75 (16%)

Query: 5  MNENSGPNPTEPLLFENGGGSTTEIVDDGQRDEVSPQSTHRAAFFGLLPHKVRSCIVTDG 64
          M+ NSG +PT PLL     G TT+I+   +R+ V   ++ R+AF   LP KVRSC+ ++ 
Sbjct: 1  MDGNSGSDPTRPLLSAIHDGQTTKII---RRNSV---NSLRSAFLSTLPDKVRSCLDSES 54

Query: 65 PPFDV-----TALSE 74
           PFDV     TALS+
Sbjct: 55 -PFDVDLSNATALSQ 68