Miyakogusa Predicted Gene

Lj0g3v0083479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083479.1 Non Characterized Hit- tr|D7KG54|D7KG54_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,38.32,0.000000000000002,seg,NULL;
PROKAR_LIPOPROTEIN,NULL,CUFF.4371.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g090900.1 | hypothetical protein | HC | chr5:39593976-3959...   142   2e-34
Medtr3g450760.1 | hypothetical protein | HC | chr3:17554283-1755...   122   1e-28

>Medtr5g090900.1 | hypothetical protein | HC |
           chr5:39593976-39597804 | 20130731
          Length = 473

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/161 (53%), Positives = 98/161 (60%), Gaps = 6/161 (3%)

Query: 1   MKRSLRFLLRLLIQSFSAIMGCFFACFRIREVLPT---ISARSNST-DVLISRNRLTSLS 56
           +KR L FLLR   +S  A M CFF         P    IS    ST DVLIS NRL+S+ 
Sbjct: 5   VKRGLGFLLRFFFRSVKAAMQCFFGIRDDNRHPPPPLFISNPPRSTADVLISWNRLSSIV 64

Query: 57  SKERGDS-ARNG-VGSQRDDIGLKDEAKFLKACGALPGTPVEIRKASEKLKVXXXXXXXX 114
           SKE  +  ARN  VG+Q  D GL+DE KFLKACG + GTP EIRK S KLKV        
Sbjct: 65  SKEEKEGLARNADVGTQDYDQGLRDEVKFLKACGTIAGTPAEIRKTSAKLKVSPVCDSDS 124

Query: 115 XXXXFHSWLPTTSVEKLQLDVQPFEPQTPIKLCQEWGNSED 155
               FHSWLP TSVEKLQL+V   +P TPIK+CQE G+S D
Sbjct: 125 DPLRFHSWLPNTSVEKLQLNVPLVDPPTPIKICQELGDSTD 165


>Medtr3g450760.1 | hypothetical protein | HC |
           chr3:17554283-17559172 | 20130731
          Length = 439

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/148 (48%), Positives = 82/148 (55%), Gaps = 17/148 (11%)

Query: 20  MGCFFACFRIRE---VLPTISARS-------NSTDVLISRNRLTSLSSKERGDS---ARN 66
           MGC F CFR+R+    LP  +A S          D   SRNRL++L   E G+     RN
Sbjct: 1   MGCLFTCFRVRDNKRHLPQTAAASAVPSRHHKVNDDATSRNRLSTLFLTEEGEEDNVHRN 60

Query: 67  G----VGSQRDDIGLKDEAKFLKACGALPGTPVEIRKASEKLKVXXXXXXXXXXXXFHSW 122
           G     GSQ DD  LKDEAKFLKACG +  TP EIRKASEKLKV            F SW
Sbjct: 61  GRNFEEGSQNDDRQLKDEAKFLKACGTIASTPAEIRKASEKLKVSPSCSNDSGPPKFRSW 120

Query: 123 LPTTSVEKLQLDVQPFEPQTPIKLCQEW 150
           L  TS E +  +VQPF P TP K C+EW
Sbjct: 121 LLDTSAENVPTNVQPFNPPTPKKQCEEW 148