Miyakogusa Predicted Gene

Lj0g3v0083449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083449.1 Non Characterized Hit- tr|F6H7M7|F6H7M7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,45.76,6e-18,
,CUFF.4366.1
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092085.1 | hypothetical protein | HC | chr5:40209753-4021...   156   1e-38
Medtr2g022820.1 | hypothetical protein | HC | chr2:7947918-79469...    60   1e-09
Medtr4g131880.1 | hypothetical protein | HC | chr4:55046163-5504...    56   2e-08

>Medtr5g092085.1 | hypothetical protein | HC |
           chr5:40209753-40210209 | 20130731
          Length = 135

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/125 (67%), Positives = 96/125 (76%), Gaps = 5/125 (4%)

Query: 38  MPQSLCSLPMRTKPQTTLPKSEEFAFSSTPATESMH-KPTTLDP---KEMAGFPPVEIGT 93
           MPQS+C  P RTKP+  + ++E+ A SS P  ESMH +  TLD    KEMA FPPV+IGT
Sbjct: 1   MPQSICIFPTRTKPEVAVLRTEDLATSSAPTKESMHNRSITLDASDTKEMAEFPPVDIGT 60

Query: 94  RGTVASLIMQEIEYFSRIELNSQDRPQRNKS-KITDVGSSISTTSRCTIASTAENTKKKR 152
           RGTVASLIMQEIEYFSRIE NSQDR QRNKS +ITDVGSS+ST SR TI ST E+TKKKR
Sbjct: 61  RGTVASLIMQEIEYFSRIESNSQDRSQRNKSHQITDVGSSLSTNSRSTIVSTVESTKKKR 120

Query: 153 GSSKL 157
            +  L
Sbjct: 121 KTVGL 125


>Medtr2g022820.1 | hypothetical protein | HC | chr2:7947918-7946987
           | 20130731
          Length = 109

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 2/104 (1%)

Query: 88  PVEIGTRGTVASLIMQEIEYFSRIELNSQDRPQRNKSKITDVGSSISTTSRCTIASTAEN 147
           PV IGTRGT+ SL+ +EIEYF++ EL+ +   Q+ +  + D+  +    S   + +T + 
Sbjct: 4   PVAIGTRGTIGSLVRKEIEYFTKFELDIRGISQKPQQHLVDMEKA-KKPSFWFLPTTWKK 62

Query: 148 TKKKRGSSKLLPSMCSMVDVS-DQGRPNGTSSFSYRNLRSDTKN 190
            K++  +++ +  +CS+ +V  +  + N    +SY+ LR D  N
Sbjct: 63  RKQRSSTNRFIRKICSVTEVDYESNQFNRIPGYSYKILRDDINN 106


>Medtr4g131880.1 | hypothetical protein | HC |
           chr4:55046163-55047388 | 20130731
          Length = 104

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 14/112 (12%)

Query: 83  MAGFPPVEIGTRGTVASLIMQEIEYFSRIEL----NSQDRPQRNKSKITDVGSSISTTSR 138
           M    PV IGTRGT+ SL+ +EIEYF+++EL    NSQ +PQ N S +  V S   ++  
Sbjct: 3   MGALAPVAIGTRGTIGSLVRKEIEYFTKVELDKFGNSQ-KPQPN-SNVNMVSSKAKSSFL 60

Query: 139 CTIASTAENTKKKRGSSKLLPSMCSMVDVSDQGRPNGTSSFSYRNLRSDTKN 190
             +       KK+RG ++ LP  CS+ + +   R  G     YR L+    N
Sbjct: 61  MLLKR-----KKQRGPNEFLPKTCSVTESNYFNRVPGC---RYRILKDHDIN 104