Miyakogusa Predicted Gene

Lj0g3v0083439.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083439.2 tr|A8J3F4|A8J3F4_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14911,43.97,5e-18,DUF1395,Protein of unknown function
DUF1395,CUFF.4369.2
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g026180.1 | spindle and kinetochore-associated-like protei...   311   3e-85
Medtr4g026180.2 | spindle and kinetochore-associated-like protei...   260   5e-70
Medtr4g026180.3 | spindle and kinetochore-associated-like protei...   187   6e-48

>Medtr4g026180.1 | spindle and kinetochore-associated-like protein |
           HC | chr4:9020682-9015814 | 20130731
          Length = 271

 Score =  311 bits (796), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/178 (84%), Positives = 156/178 (87%), Gaps = 1/178 (0%)

Query: 4   HVPYQMPDKMAISNLETSRCLFPEFSGQVSGSFEALKLDEEPAALPKEKKGRGAPPMWYV 63
           H+P QMPD+  +SN E SR LF EFS Q S S+EALK   EP ALPKEKKGRG  P WYV
Sbjct: 95  HIPSQMPDRTTLSNSEISRSLFAEFSRQDSESYEALK-HVEPVALPKEKKGRGYAPTWYV 153

Query: 64  TGSELDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLITAPKKKLAENLWEKALEIRDI 123
           TGSE+DSLSSYMRGRLTLEKVNAAITDMASYAEANAQLI APKKKLAENLWEKALEIRDI
Sbjct: 154 TGSEMDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLIVAPKKKLAENLWEKALEIRDI 213

Query: 124 AGMEGIKGKHFFLEVDIKGPSLKLDNTGKAILTVLRHLGRINETRVGHHRVIILQKPH 181
            G EGIKGKHFFLE DIKGPSLKLDNTGKAILTVLRHLGRINETRVGHHRV ILQKPH
Sbjct: 214 GGTEGIKGKHFFLETDIKGPSLKLDNTGKAILTVLRHLGRINETRVGHHRVFILQKPH 271


>Medtr4g026180.2 | spindle and kinetochore-associated-like protein |
           HC | chr4:9020682-9015814 | 20130731
          Length = 264

 Score =  260 bits (665), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 128/154 (83%), Positives = 133/154 (86%), Gaps = 1/154 (0%)

Query: 4   HVPYQMPDKMAISNLETSRCLFPEFSGQVSGSFEALKLDEEPAALPKEKKGRGAPPMWYV 63
           H+P QMPD+  +SN E SR LF EFS Q S S+EALK   EP ALPKEKKGRG  P WYV
Sbjct: 95  HIPSQMPDRTTLSNSEISRSLFAEFSRQDSESYEALK-HVEPVALPKEKKGRGYAPTWYV 153

Query: 64  TGSELDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLITAPKKKLAENLWEKALEIRDI 123
           TGSE+DSLSSYMRGRLTLEKVNAAITDMASYAEANAQLI APKKKLAENLWEKALEIRDI
Sbjct: 154 TGSEMDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLIVAPKKKLAENLWEKALEIRDI 213

Query: 124 AGMEGIKGKHFFLEVDIKGPSLKLDNTGKAILTV 157
            G EGIKGKHFFLE DIKGPSLKLDNTGKAILTV
Sbjct: 214 GGTEGIKGKHFFLETDIKGPSLKLDNTGKAILTV 247


>Medtr4g026180.3 | spindle and kinetochore-associated-like protein |
           HC | chr4:9020682-9015814 | 20130731
          Length = 221

 Score =  187 bits (474), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 92/115 (80%), Positives = 97/115 (84%), Gaps = 1/115 (0%)

Query: 4   HVPYQMPDKMAISNLETSRCLFPEFSGQVSGSFEALKLDEEPAALPKEKKGRGAPPMWYV 63
           H+P QMPD+  +SN E SR LF EFS Q S S+EALK   EP ALPKEKKGRG  P WYV
Sbjct: 95  HIPSQMPDRTTLSNSEISRSLFAEFSRQDSESYEALK-HVEPVALPKEKKGRGYAPTWYV 153

Query: 64  TGSELDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLITAPKKKLAENLWEKAL 118
           TGSE+DSLSSYMRGRLTLEKVNAAITDMASYAEANAQLI APKKKLAENLWEKAL
Sbjct: 154 TGSEMDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLIVAPKKKLAENLWEKAL 208