Miyakogusa Predicted Gene

Lj0g3v0082919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082919.1 Non Characterized Hit- tr|Q2PEP4|Q2PEP4_TRIPR
Putative uncharacterized protein (Fragment)
OS=Trifoli,79.48,0,Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; seg,NULL;
TOPOISOMERASE-RELATED,CUFF.4351.1
         (536 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g079330.1 | nucleotidyltransferase family protein | HC | c...   717   0.0  
Medtr2g079330.3 | nucleotidyltransferase family protein | HC | c...   532   e-151
Medtr2g079330.2 | nucleotidyltransferase family protein | HC | c...   448   e-126
Medtr4g027425.1 | nucleotidyltransferase family protein | HC | c...    79   1e-14
Medtr8g033420.1 | nucleotidyltransferase family protein | HC | c...    64   5e-10

>Medtr2g079330.1 | nucleotidyltransferase family protein | HC |
           chr2:33389842-33396770 | 20130731
          Length = 514

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/477 (75%), Positives = 398/477 (83%), Gaps = 4/477 (0%)

Query: 5   QELPPIPETFLYETLPPLSSSTAAVDKSPPSDHHEPLSVFRSEISLSTVHCASPDSAAPD 64
           QE   IPE   Y TL PL     A D SP SD+HE  SVFR+EISL T    S  S A D
Sbjct: 5   QENLQIPEKIEYTTLTPLPLPLTA-DDSPDSDNHEQYSVFRNEISLDTPQVNSVSSTAID 63

Query: 65  FFSLDVAGEDSPGRDPLPEPVTLSEPKTPALAPKPTLESNWFRGDCKFRSPMLQLHKEIV 124
           FFSLDVA E  P  D LPEPVT  EPKTPA+  +  LE+ WFRGDCKF+SPMLQLHKEIV
Sbjct: 64  FFSLDVADEIEP-EDNLPEPVTPVEPKTPAIEHEVKLENGWFRGDCKFKSPMLQLHKEIV 122

Query: 125 DFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKA 184
           DFCEFLSPTPEEKA RD AI SV +VIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILK+
Sbjct: 123 DFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKS 182

Query: 185 GLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAA 244
           GLP PQ+GLNAISRSLSQR +AKKIQVIGKARVPIIKFVE++S ++FDISFD++NGPKAA
Sbjct: 183 GLPKPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVERKSCLSFDISFDLENGPKAA 242

Query: 245 EYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRNLRQSQVSA 304
           EYIQ+AVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY          RN+RQSQ SA
Sbjct: 243 EYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQASA 302

Query: 305 EHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGFANKGRPFLIGIEDPQAPE 364
           EHNLGLLLVHFFD YGRKLNT+DVGV CNG GTFF+KSS+GF NK RP L+GI+DPQ P+
Sbjct: 303 EHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQKSSRGFYNKARPLLLGIQDPQTPD 362

Query: 365 NDVGKNSYNYFQIRSAFAMAFSTLTDPKIILSLGPKRSILGTIIRPDPNLIERKGGLNGE 424
           ND+GKNS+NYFQ+RSAF MA+STLT+PK+ILSLGP RSILGTIIRPDP L+ERKGG NGE
Sbjct: 363 NDIGKNSFNYFQVRSAFLMAYSTLTNPKVILSLGPNRSILGTIIRPDPVLMERKGGSNGE 422

Query: 425 VTFNSLLPGAGEPIQQKFGEQDMLCNWQLDDEEELLPR--GVDTSAEPSRRSNSTKK 479
           +TFNSLLPGAGEPI+Q++GE DMLCNWQLD EEE LPR  G +T AEPS RS+  K+
Sbjct: 423 MTFNSLLPGAGEPIRQQYGEHDMLCNWQLDFEEEPLPRGDGDNTPAEPSTRSSRKKR 479


>Medtr2g079330.3 | nucleotidyltransferase family protein | HC |
           chr2:33389842-33395356 | 20130731
          Length = 363

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/358 (75%), Positives = 293/358 (81%), Gaps = 2/358 (0%)

Query: 5   QELPPIPETFLYETLPPLSSSTAAVDKSPPSDHHEPLSVFRSEISLSTVHCASPDSAAPD 64
           QE   IPE   Y TL PL     A D SP SD+HE  SVFR+EISL T    S  S A D
Sbjct: 5   QENLQIPEKIEYTTLTPLPLPLTA-DDSPDSDNHEQYSVFRNEISLDTPQVNSVSSTAID 63

Query: 65  FFSLDVAGEDSPGRDPLPEPVTLSEPKTPALAPKPTLESNWFRGDCKFRSPMLQLHKEIV 124
           FFSLDVA E  P  D LPEPVT  EPKTPA+  +  LE+ WFRGDCKF+SPMLQLHKEIV
Sbjct: 64  FFSLDVADEIEP-EDNLPEPVTPVEPKTPAIEHEVKLENGWFRGDCKFKSPMLQLHKEIV 122

Query: 125 DFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKA 184
           DFCEFLSPTPEEKA RD AI SV +VIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILK+
Sbjct: 123 DFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKS 182

Query: 185 GLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAA 244
           GLP PQ+GLNAISRSLSQR +AKKIQVIGKARVPIIKFVE++S ++FDISFD++NGPKAA
Sbjct: 183 GLPKPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVERKSCLSFDISFDLENGPKAA 242

Query: 245 EYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRNLRQSQVSA 304
           EYIQ+AVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY          RN+RQSQ SA
Sbjct: 243 EYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQASA 302

Query: 305 EHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGFANKGRPFLIGIEDPQA 362
           EHNLGLLLVHFFD YGRKLNT+DVGV CNG GTFF+KSS+GF NK RP L+GI+DPQ 
Sbjct: 303 EHNLGLLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQKSSRGFYNKARPLLLGIQDPQV 360


>Medtr2g079330.2 | nucleotidyltransferase family protein | HC |
           chr2:33389842-33396770 | 20130731
          Length = 361

 Score =  448 bits (1152), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/309 (75%), Positives = 251/309 (81%), Gaps = 2/309 (0%)

Query: 5   QELPPIPETFLYETLPPLSSSTAAVDKSPPSDHHEPLSVFRSEISLSTVHCASPDSAAPD 64
           QE   IPE   Y TL PL     A D SP SD+HE  SVFR+EISL T    S  S A D
Sbjct: 5   QENLQIPEKIEYTTLTPLPLPLTA-DDSPDSDNHEQYSVFRNEISLDTPQVNSVSSTAID 63

Query: 65  FFSLDVAGEDSPGRDPLPEPVTLSEPKTPALAPKPTLESNWFRGDCKFRSPMLQLHKEIV 124
           FFSLDVA E  P  D LPEPVT  EPKTPA+  +  LE+ WFRGDCKF+SPMLQLHKEIV
Sbjct: 64  FFSLDVADEIEP-EDNLPEPVTPVEPKTPAIEHEVKLENGWFRGDCKFKSPMLQLHKEIV 122

Query: 125 DFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKA 184
           DFCEFLSPTPEEKA RD AI SV +VIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILK+
Sbjct: 123 DFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKS 182

Query: 185 GLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAA 244
           GLP PQ+GLNAISRSLSQR +AKKIQVIGKARVPIIKFVE++S ++FDISFD++NGPKAA
Sbjct: 183 GLPKPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVERKSCLSFDISFDLENGPKAA 242

Query: 245 EYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRNLRQSQVSA 304
           EYIQ+AVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY          RN+RQSQ SA
Sbjct: 243 EYIQDAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQASA 302

Query: 305 EHNLGLLLV 313
           EHNLGLLL+
Sbjct: 303 EHNLGLLLI 311


>Medtr4g027425.1 | nucleotidyltransferase family protein | HC |
            chr4:9491496-9506334 | 20130731
          Length = 1573

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 7/176 (3%)

Query: 223  VEKRSGVAFDISFDI--DNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGG 280
            ++  + V  DISF      G +    ++E   ++P   PL L+LK FL  R L++ YSGG
Sbjct: 1379 LKDSNSVRVDISFKSPSHTGLQTTGMVKELTEQFPAATPLALVLKQFLADRSLDQSYSGG 1438

Query: 281  IGSYXXXXXXXXXXRNLRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFR 340
            + SY          ++          N G LLV F  F+G   +   + +S  G+G + +
Sbjct: 1439 LSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLVDFLYFFGNVFDPRHMRISVQGSGLYIK 1498

Query: 341  KSSKGFANKGRPFLIGIEDPQAPENDVGKNSYNYFQIRSAFAMAFSTLTDPKIILS 396
            +      +      I I+DP  P N+VG+N +   Q   AF+ A++ L +    LS
Sbjct: 1499 RERGCSIDP-----IHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYTVLENELTFLS 1549


>Medtr8g033420.1 | nucleotidyltransferase family protein | HC |
           chr8:12908258-12903936 | 20130731
          Length = 367

 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 112 FRSPMLQLHKEIVDFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLY 171
           F  P L +++ ++       P  EEK  ++  +  +  ++   WP  ++ ++GS  +   
Sbjct: 43  FSVPFLSIYESLI-------PPEEEKLKQNQLLGLLEKLVCKEWPMARLYLYGSCASSFG 95

Query: 172 LPTSDIDVVILKAGLPNPQMGLNAISRSLS---QRGIAKKIQVIGKARVPIIKFVEKRSG 228
           +  SDIDV +    + +  +  + I   L+   Q    + +Q + +ARVPI+K ++  +G
Sbjct: 96  VSKSDIDVCL---AIQDADVDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTG 152

Query: 229 VAFDISFDIDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
           ++ DI  +        + +++     P LR L  I+K + + R +NE Y G + SY
Sbjct: 153 ISCDICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSY 208