Miyakogusa Predicted Gene

Lj0g3v0082899.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082899.2 tr|Q29FG9|Q29FG9_DROPS GA19946 OS=Drosophila
pseudoobscura pseudoobscura GN=GA19946 PE=4 SV=2,31,9e-19,CELL
DIVISION CYCLE 5-LIKE PROTEIN,NULL; MYB-LIKE DNA-BINDING PROTEIN
MYB,NULL; HTH_MYB,Myb domain; ,CUFF.4334.2
         (347 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115550.1 | cell division control protein, putative | HC |...   294   1e-79
Medtr7g115550.2 | cell division control protein, putative | HC |...   144   1e-34
Medtr5g010470.1 | pre-mRNA splicing factor component protein | H...   108   1e-23

>Medtr7g115550.1 | cell division control protein, putative | HC |
           chr7:47751336-47758260 | 20130731
          Length = 1004

 Score =  294 bits (752), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 169/340 (49%), Positives = 211/340 (62%), Gaps = 31/340 (9%)

Query: 35  IKKADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLNDLMYFPTREAYGLSSVAGNMEK 94
           +K AD+LIK+EA+YL  AMGH ++ L+EF+EAH TC+NDLMYF TR AYGLSSVAGN EK
Sbjct: 629 MKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFDTRNAYGLSSVAGNAEK 688

Query: 95  VTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYEVRAKQSLGPQIEATFRQMDVAAT 154
           + +LQ+EFE+VR+KL+DGK K+ RLEKKV   TQGYE+R+K+ L PQIEATF+QMDVAAT
Sbjct: 689 LAALQNEFENVRSKLDDGKEKLIRLEKKVTTFTQGYEMRSKKGLWPQIEATFKQMDVAAT 748

Query: 155 EIECFIALQKQEQLAASHRINNLRDEVXXXXXXXXXXXXXYVSLIEELEKKQAMMEQYRA 214
           E ECF AL+KQEQ AASHRINNL  EV             Y  L  ELE+ Q +ME +R 
Sbjct: 749 EFECFQALKKQEQSAASHRINNLWSEVQKQKELEKILQKRYGDLTTELERTQNVMEHFRV 808

Query: 215 LAQQQEEIEALSHA----------------HXXXXXXXXXXXXXXCKDMPHSLEHGSVVA 258
            AQQ+EEIEA +HA                H               K+  H LE     A
Sbjct: 809 QAQQKEEIEAKNHAQEEVQAQQKEEIEAKNHAIEEVQAQQQEETEAKN--HVLESTEATA 866

Query: 259 DDPSHVGT---------ANQQVDIVQDQGTSSPKKDMDVDSDEVH----EDVKLPDATIA 305
           D+ +  GT         A+QQ+  +QDQ TSS K DMDVDS E        V LPDA +A
Sbjct: 867 DEINVQGTENSEAVPLSADQQIATMQDQATSSSKIDMDVDSSEAQMTDSTGVTLPDAPVA 926

Query: 306 AENDNGKVEGTGTDGDAYNGENTLDMGAAVEISTSEGSED 345
            +  +  +E    +    N E T+DM AAVEI ++EG+E+
Sbjct: 927 EDGHSNVLEDKNVESYIENSETTVDMSAAVEIKSNEGNEE 966



 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query: 1  MKYGKNQWARISSLLVRKSAKQCKARWHEWLDPSIKKADRLIKEEARYLCIA 52
          MKYGKNQWARISSLLVRKSAKQCKARW+EWLDPSIKK +   +E+ + L +A
Sbjct: 23 MKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLA 74


>Medtr7g115550.2 | cell division control protein, putative | HC |
           chr7:47751339-47755452 | 20130731
          Length = 729

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/98 (68%), Positives = 83/98 (84%)

Query: 35  IKKADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLNDLMYFPTREAYGLSSVAGNMEK 94
           +K AD+LIK+EA+YL  AMGH ++ L+EF+EAH TC+NDLMYF TR AYGLSSVAGN EK
Sbjct: 629 MKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFDTRNAYGLSSVAGNAEK 688

Query: 95  VTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYEV 132
           + +LQ+EFE+VR+KL+DGK K+ RLEKKV   TQGYEV
Sbjct: 689 LAALQNEFENVRSKLDDGKEKLIRLEKKVTTFTQGYEV 726



 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query: 1  MKYGKNQWARISSLLVRKSAKQCKARWHEWLDPSIKKADRLIKEEARYLCIA 52
          MKYGKNQWARISSLLVRKSAKQCKARW+EWLDPSIKK +   +E+ + L +A
Sbjct: 23 MKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLA 74


>Medtr5g010470.1 | pre-mRNA splicing factor component protein | HC |
           chr5:2814812-2809255 | 20130731
          Length = 829

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 69/97 (71%), Gaps = 17/97 (17%)

Query: 35  IKKADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLNDLMYFPTREAYGLSSVAGNMEK 94
           +K AD+L+K+E +YLC AMGHG++ L++F+EAH TC+NDLMYF                 
Sbjct: 601 MKSADQLMKDETQYLCEAMGHGNDSLEDFVEAHTTCINDLMYF----------------- 643

Query: 95  VTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYE 131
            T LQ+EFE++R+KL DGK K+ RLEKKV +LTQGYE
Sbjct: 644 DTPLQNEFENMRSKLYDGKEKMTRLEKKVTLLTQGYE 680



 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 44/52 (84%)

Query: 1  MKYGKNQWARISSLLVRKSAKQCKARWHEWLDPSIKKADRLIKEEARYLCIA 52
          MKYGKNQWARISSLLV KSAKQCKARW+EWLDPSIKK +   +E+ + L +A
Sbjct: 23 MKYGKNQWARISSLLVCKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLA 74