Miyakogusa Predicted Gene
- Lj0g3v0082899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0082899.1 Non Characterized Hit- tr|I1LBQ2|I1LBQ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58241 PE,75.44,0,CELL
DIVISION CYCLE 5-LIKE PROTEIN,NULL; MYB-LIKE DNA-BINDING PROTEIN
MYB,NULL; coiled-coil,NULL; se,CUFF.4334.1
(514 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g115550.1 | cell division control protein, putative | HC |... 526 e-149
Medtr7g115550.2 | cell division control protein, putative | HC |... 370 e-102
Medtr5g010470.1 | pre-mRNA splicing factor component protein | H... 287 2e-77
>Medtr7g115550.1 | cell division control protein, putative | HC |
chr7:47751336-47758260 | 20130731
Length = 1004
Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust.
Identities = 288/541 (53%), Positives = 345/541 (63%), Gaps = 31/541 (5%)
Query: 1 MTPTRSEFSLGMAPKGTPLRDELRINDDMNTPNSAKLEQQRQADXXXXXXXXXXXXPQPK 60
MTP R FS GM PKGTPLRDEL IN+DM +SAKLE +RQAD PQPK
Sbjct: 428 MTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPK 487
Query: 61 NEYQIVMQPVPXXXXXXXXXXXXDMSDXXXXXXXXXXXXXXXXXXKRSKVLQRQLPRPPA 120
NEYQIVMQP+ DMSD KRSKVLQR+LPRPP
Sbjct: 488 NEYQIVMQPIQEDVEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPP 547
Query: 121 ASLELIRYSLMRDDGDKSSFVPPTSMEQADEFIRRELLTLLEHDNAKYPLDDKVGKEKKK 180
ASLELIR SL+R DGDKSSFVPPT +EQADE IR+ELL LLEHDNAKYPL++ KE+KK
Sbjct: 548 ASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKERKK 607
Query: 181 RPKNAANGSVVPLIEDFEEDEMQEADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLND 240
K AANG +P+IED++EDEM+ AD+LIK+EA+YL AMGH ++ L+EF+EAH TC+ND
Sbjct: 608 GSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCIND 667
Query: 241 LMYFPTREAYGLSSVAGNMEKVTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYEVR 300
LMYF TR AYGLSSVAGN EK+ +LQ+EFE+VR+KL+DGK K+ RLEKKV TQGYE+R
Sbjct: 668 LMYFDTRNAYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKLIRLEKKVTTFTQGYEMR 727
Query: 301 AKQSLGPQIEATFRQMDVAATEIECFIALQKQEQLAASHRINNLRDEVXXXXXXXXXXXX 360
+K+ L PQIEATF+QMDVAATE ECF AL+KQEQ AASHRINNL EV
Sbjct: 728 SKKGLWPQIEATFKQMDVAATEFECFQALKKQEQSAASHRINNLWSEVQKQKELEKILQK 787
Query: 361 XYVSLIEELEKKQAMMEQYRALAQQQEEIEALSHA----------------HXXXXXXXX 404
Y L ELE+ Q +ME +R AQQ+EEIEA +HA H
Sbjct: 788 RYGDLTTELERTQNVMEHFRVQAQQKEEIEAKNHAQEEVQAQQKEEIEAKNHAIEEVQAQ 847
Query: 405 XXXXXXCKDMPHSLEHGSVVADDPSHVGT---------ANQQVDIVQDQGTSSPKKDMDV 455
K+ H LE AD+ + GT A+QQ+ +QDQ TSS K DMDV
Sbjct: 848 QQEETEAKN--HVLESTEATADEINVQGTENSEAVPLSADQQIATMQDQATSSSKIDMDV 905
Query: 456 DSDEVH----EDVKLPDATIAAENDNGKVEGTGTDGDAYNGENTLDMGAAVEISTSEGSE 511
DS E V LPDA +A + + +E + N E T+DM AAVEI ++EG+E
Sbjct: 906 DSSEAQMTDSTGVTLPDAPVAEDGHSNVLEDKNVESYIENSETTVDMSAAVEIKSNEGNE 965
Query: 512 D 512
+
Sbjct: 966 E 966
>Medtr7g115550.2 | cell division control protein, putative | HC |
chr7:47751339-47755452 | 20130731
Length = 729
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/299 (62%), Positives = 217/299 (72%)
Query: 1 MTPTRSEFSLGMAPKGTPLRDELRINDDMNTPNSAKLEQQRQADXXXXXXXXXXXXPQPK 60
MTP R FS GM PKGTPLRDEL IN+DM +SAKLE +RQAD PQPK
Sbjct: 428 MTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPK 487
Query: 61 NEYQIVMQPVPXXXXXXXXXXXXDMSDXXXXXXXXXXXXXXXXXXKRSKVLQRQLPRPPA 120
NEYQIVMQP+ DMSD KRSKVLQR+LPRPP
Sbjct: 488 NEYQIVMQPIQEDVEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPP 547
Query: 121 ASLELIRYSLMRDDGDKSSFVPPTSMEQADEFIRRELLTLLEHDNAKYPLDDKVGKEKKK 180
ASLELIR SL+R DGDKSSFVPPT +EQADE IR+ELL LLEHDNAKYPL++ KE+KK
Sbjct: 548 ASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKERKK 607
Query: 181 RPKNAANGSVVPLIEDFEEDEMQEADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLND 240
K AANG +P+IED++EDEM+ AD+LIK+EA+YL AMGH ++ L+EF+EAH TC+ND
Sbjct: 608 GSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCIND 667
Query: 241 LMYFPTREAYGLSSVAGNMEKVTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYEV 299
LMYF TR AYGLSSVAGN EK+ +LQ+EFE+VR+KL+DGK K+ RLEKKV TQGYEV
Sbjct: 668 LMYFDTRNAYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKLIRLEKKVTTFTQGYEV 726
>Medtr5g010470.1 | pre-mRNA splicing factor component protein | HC |
chr5:2814812-2809255 | 20130731
Length = 829
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 183/298 (61%), Gaps = 42/298 (14%)
Query: 1 MTPTRSEFSLGMAPKGTPLRDELRINDDMNTPNSAKLEQQRQADXXXXXXXXXXXXPQPK 60
MTP R FS GM PKGTPLRDEL IN+DM +SAKLE +RQAD PQPK
Sbjct: 425 MTPARDGFSFGMTPKGTPLRDELHINEDMEMRDSAKLELRRQADMKKSLRSGLSSLPQPK 484
Query: 61 NEYQIVMQPVPXXXXXXXXXXXXDMSDXXXXXXXXXXXXXXXXXXKRSKVLQRQLPRPPA 120
NEYQIVMQP+ DMSD KRSKVLQR+LP PP
Sbjct: 485 NEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPTPPP 544
Query: 121 ASLELIRYSLMRDDGDKSSFVPPTSMEQADEFIRRELLTLLEHDNAKYPLDDKVGKEKKK 180
ASLELIR SL+R DGDKSSFVPPT +EQADE IR+EL LLEHDNAKYPL++
Sbjct: 545 ASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELQALLEHDNAKYPLEEI------- 597
Query: 181 RPKNAANGSVVPLIEDFEEDEMQEADRLIKEEARYLCIAMGHGSEPLDEFIEAHNTCLND 240
EDEM+ AD+L+K+E +YLC AMGHG++ L++F+EAH TC+ND
Sbjct: 598 ------------------EDEMKSADQLMKDETQYLCEAMGHGNDSLEDFVEAHTTCIND 639
Query: 241 LMYFPTREAYGLSSVAGNMEKVTSLQHEFESVRNKLEDGKVKIARLEKKVIVLTQGYE 298
LMYF T LQ+EFE++R+KL DGK K+ RLEKKV +LTQGYE
Sbjct: 640 LMYFD-----------------TPLQNEFENMRSKLYDGKEKMTRLEKKVTLLTQGYE 680