Miyakogusa Predicted Gene

Lj0g3v0082389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082389.1 Non Characterized Hit- tr|Q00YQ0|Q00YQ0_OSTTA
Uncharacterized protein (Fragment) OS=Ostreococcus tau,32.02,6e-18,no
description,Ribosomal protein L25, beta domain; Ribosomal protein
L25-like,Ribosomal protein L25/,CUFF.4296.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079680.1 | 50S ribosomal protein L25, putative | HC | chr...   335   2e-92
Medtr7g086470.1 | 50S ribosomal protein L25, putative | HC | chr...   135   3e-32
Medtr7g086470.2 | 50S ribosomal protein L25, putative | HC | chr...    80   1e-15

>Medtr8g079680.1 | 50S ribosomal protein L25, putative | HC |
           chr8:34161321-34165460 | 20130731
          Length = 255

 Score =  335 bits (858), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 157/189 (83%), Positives = 174/189 (92%)

Query: 2   QGRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAG 61
           QGRIPAVVF QDLL K    RS ++K LLTVEK+QIKA+LNS++  FFCSTRFPLQIRAG
Sbjct: 52  QGRIPAVVFFQDLLEKSPEARSTSRKQLLTVEKRQIKAVLNSIEAPFFCSTRFPLQIRAG 111

Query: 62  SGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKG 121
           SGS+HL+ESGTVLP+KIH D+ESG ILNLVFVWAE+GMNLKVDVPVV KGEDVCPGL+KG
Sbjct: 112 SGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDGMNLKVDVPVVIKGEDVCPGLKKG 171

Query: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICK 181
           GFLNKIRTSL++L PSEHIPSKIEVD+SNLDIEDRIFMRDIEVHPSLKLL+KNENMPICK
Sbjct: 172 GFLNKIRTSLRYLGPSEHIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLNKNENMPICK 231

Query: 182 VVPTSLGNQ 190
           +VPTSLG Q
Sbjct: 232 IVPTSLGKQ 240


>Medtr7g086470.1 | 50S ribosomal protein L25, putative | HC |
           chr7:33567574-33571031 | 20130731
          Length = 266

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 13/196 (6%)

Query: 3   GRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQI---- 58
           GR+P++VF Q+             K L++V   QI+ ++N +  SFF S  F LQ+    
Sbjct: 74  GRVPSIVFEQE------DGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQF 127

Query: 59  --RAGSGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCP 116
              +      ++E+  VLP  IH+   +   LN+ F+ A     LKVDVP+VF+G+D+ P
Sbjct: 128 DSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISP 187

Query: 117 GLQKGGFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNEN 176
           GL+KG  LN I+ ++K+LCP++ IP  I+VD+S LD+  ++ M D+ VHP+LKLL   + 
Sbjct: 188 GLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLLHPKDE 247

Query: 177 MPICKVVPTSLGNQAP 192
             +CK++   +    P
Sbjct: 248 A-VCKIMGQRVSETQP 262


>Medtr7g086470.2 | 50S ribosomal protein L25, putative | HC |
           chr7:33567598-33568662 | 20130731
          Length = 207

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 3   GRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQI---- 58
           GR+P++VF Q+             K L++V   QI+ ++N +  SFF S  F LQ+    
Sbjct: 74  GRVPSIVFEQE------DGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQF 127

Query: 59  --RAGSGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCP 116
              +      ++E+  VLP  IH+   +   LN+ F+ A     LKVDVP+VF+G+D+ P
Sbjct: 128 DSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISP 187

Query: 117 GLQKG 121
           GL+KG
Sbjct: 188 GLKKG 192