Miyakogusa Predicted Gene

Lj0g3v0082129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082129.1 tr|B9S9Q8|B9S9Q8_RICCO Pectinesterase OS=Ricinus
communis GN=RCOM_0521220 PE=3
SV=1,61.64,1e-18,Pectinesterase,Pectinesterase, catalytic; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no descri,CUFF.4285.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g095490.1 | pectinesterase | HC | chr5:41736379-41738796 |...   113   3e-26
Medtr5g012600.1 | pectinesterase | HC | chr5:3814791-3817382 | 2...    60   5e-10
Medtr6g025590.1 | pectinesterase | LC | chr6:8818541-8815189 | 2...    56   6e-09
Medtr1g086540.1 | pectinesterase | HC | chr1:38723576-38725363 |...    51   2e-07
Medtr6g088810.1 | pectinesterase | HC | chr6:33967034-33962382 |...    50   4e-07
Medtr6g024165.1 | pectinesterase | HC | chr6:8620040-8624254 | 2...    48   3e-06

>Medtr5g095490.1 | pectinesterase | HC | chr5:41736379-41738796 |
           20130731
          Length = 359

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/66 (81%), Positives = 60/66 (90%)

Query: 13  REKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCA 72
           RE+V V KTKPY+SFIG+RN TAS VITWNSKSSD+GPNG  LGTYGSATVAVES++FCA
Sbjct: 99  RERVFVPKTKPYISFIGRRNLTASPVITWNSKSSDRGPNGQELGTYGSATVAVESNFFCA 158

Query: 73  TEITFE 78
           TEITFE
Sbjct: 159 TEITFE 164


>Medtr5g012600.1 | pectinesterase | HC | chr5:3814791-3817382 |
           20130731
          Length = 364

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 13  REKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCA 72
           +EKV+V  TKPY++F G+  +    VI W+ ++ D GPNG  L TY +A+V V ++YF A
Sbjct: 101 KEKVVVPVTKPYITFQGEGREV--TVIEWHDRACDPGPNGQQLRTYRTASVTVFANYFSA 158

Query: 73  TEITFE 78
             ITF+
Sbjct: 159 KNITFK 164


>Medtr6g025590.1 | pectinesterase | LC | chr6:8818541-8815189 |
           20130731
          Length = 240

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 13  REKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCA 72
           REK+++  T P+++F+G     +   ITWN   S  G +G  L TY SA+VAVE+DYF A
Sbjct: 87  REKIVIPITLPFITFLGDAKGNSK--ITWNDSYSTIGSDGKPLETYKSASVAVEADYFIA 144

Query: 73  TEITFE 78
             + F+
Sbjct: 145 INMIFK 150


>Medtr1g086540.1 | pectinesterase | HC | chr1:38723576-38725363 |
           20130731
          Length = 347

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 13  REKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCA 72
           REK++V KT P+++F+G      +  IT N   S  G +G  L T+ SATVAV + YF A
Sbjct: 88  REKIVVPKTLPFITFLGDVRDPPT--ITGNDTQSVTGSDGAQLRTFNSATVAVNASYFMA 145

Query: 73  TEITFE 78
             I FE
Sbjct: 146 ININFE 151


>Medtr6g088810.1 | pectinesterase | HC | chr6:33967034-33962382 |
           20130731
          Length = 379

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 14  EKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCAT 73
           EKV +   K +++  G    T   ++ W   ++  GP G  LGTYGSAT AV S YF A 
Sbjct: 121 EKVNIPPLKSFITIEGDGADT--TIVQWGDTAATPGPRGNPLGTYGSATFAVNSPYFIAK 178

Query: 74  EITFE 78
            ITF+
Sbjct: 179 NITFK 183


>Medtr6g024165.1 | pectinesterase | HC | chr6:8620040-8624254 |
           20130731
          Length = 338

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 13  REKVLVTKTKPYVSFIGKRNQTASVVITWNSKSSDKGPNGIALGTYGSATVAVESDYFCA 72
           REK+LV    P+++F+G  + T   ++  N  + D G +G  L T  SATVAV+SDYF A
Sbjct: 79  REKILVKL--PFITFLG--DPTDQPIVIGNDTAHDIGGDGKPLRTLNSATVAVDSDYFIA 134

Query: 73  TEITFE 78
             + F+
Sbjct: 135 VNMKFQ 140