Miyakogusa Predicted Gene

Lj0g3v0081539.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081539.2 Non Characterized Hit- tr|I3SFZ3|I3SFZ3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,46.15,0.00000000000002,seg,NULL,CUFF.4238.2
         (229 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g040640.1 | hypothetical protein | HC | chr8:15137347-1514...   173   1e-43
Medtr8g040640.2 | hypothetical protein | HC | chr8:15137347-1514...   128   6e-30

>Medtr8g040640.1 | hypothetical protein | HC |
           chr8:15137347-15141619 | 20130731
          Length = 296

 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 140/236 (59%), Gaps = 17/236 (7%)

Query: 3   DFTDESFNNQIELESSLNDKDQXXXXXACGGLPEQSFQQTTFSCDQPNYQLQDL-PRFER 61
           +F  ESF + ++ ESS  DKDQ      CGGL EQSFQQ+     Q   QLQ+L   FE+
Sbjct: 60  NFNSESFRDGVKFESSSYDKDQSSSSSVCGGLTEQSFQQSRHQHQQN--QLQELSSSFEQ 117

Query: 62  -MDDIFLETIPEDPPCVEILDKSVNFSPEKRCSNTPGGLQKDIAASKFDSSNSESKDCLD 120
             DDIFL++I ED PC E  +KS  F PE +CSNT G LQ DIAAS++ + NS S D L+
Sbjct: 118 TTDDIFLDSILEDFPCAENSNKSFYFYPENQCSNTAGELQNDIAASEYLTCNSNSDDLLN 177

Query: 121 IEPPPV----------KSLDSH---EEFILKDLQMVIGQFTEGTRFGFRDALYRLSGYTE 167
           IE   +          +++  H   EE  L++L+ +I QF + TR  FRDALYRL+  T+
Sbjct: 178 IETLQILDHSEQFSGDEAMHKHSSIEESTLQNLEAIISQFNDKTRIHFRDALYRLARDTK 237

Query: 168 QQQVLQDKDADPNTQKATLHTDDNETVRFQNNKSLESETNSTDRLIAKLMFNNMEF 223
            Q V +D D D + Q+A      NE +R  + K +ESETNS DR +A LMFN   +
Sbjct: 238 HQYVAEDLDGDVSMQEAMPWAVHNEALRSDDKKQMESETNSVDRAVANLMFNGTAY 293


>Medtr8g040640.2 | hypothetical protein | HC |
           chr8:15137347-15141619 | 20130731
          Length = 209

 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 13/172 (7%)

Query: 65  IFLETIPEDPPCVEILDKSVNFSPEKRCSNTPGGLQKDIAASKFDSSNSESKDCLDIEPP 124
           I  ++I ED PC E  +KS  F PE +CSNT G LQ DIAAS++ + NS S D L+IE  
Sbjct: 35  IVGDSILEDFPCAENSNKSFYFYPENQCSNTAGELQNDIAASEYLTCNSNSDDLLNIETL 94

Query: 125 PV----------KSLDSH---EEFILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQV 171
            +          +++  H   EE  L++L+ +I QF + TR  FRDALYRL+  T+ Q V
Sbjct: 95  QILDHSEQFSGDEAMHKHSSIEESTLQNLEAIISQFNDKTRIHFRDALYRLARDTKHQYV 154

Query: 172 LQDKDADPNTQKATLHTDDNETVRFQNNKSLESETNSTDRLIAKLMFNNMEF 223
            +D D D + Q+A      NE +R  + K +ESETNS DR +A LMFN   +
Sbjct: 155 AEDLDGDVSMQEAMPWAVHNEALRSDDKKQMESETNSVDRAVANLMFNGTAY 206