Miyakogusa Predicted Gene

Lj0g3v0081319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081319.1 Non Characterized Hit- tr|I0Z8I0|I0Z8I0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.91,8e-19,seg,NULL,CUFF.4210.1
         (265 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g101360.1 | proteinaceous RNase P | HC | chr2:43577817-435...   162   3e-40
Medtr2g101360.2 | proteinaceous RNase P | HC | chr2:43577836-435...   162   3e-40
Medtr8g103380.2 | Zc3h12a-like ribonuclease NYN domain protein |...   146   2e-35
Medtr8g103380.4 | Zc3h12a-like ribonuclease NYN domain protein |...   146   2e-35
Medtr8g103380.6 | Zc3h12a-like ribonuclease NYN domain protein |...   146   2e-35
Medtr8g103380.3 | Zc3h12a-like ribonuclease NYN domain protein |...   146   2e-35
Medtr8g103380.5 | Zc3h12a-like ribonuclease NYN domain protein |...   146   2e-35
Medtr8g103380.1 | Zc3h12a-like ribonuclease NYN domain protein |...   145   3e-35

>Medtr2g101360.1 | proteinaceous RNase P | HC |
           chr2:43577817-43582278 | 20130731
          Length = 558

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 5   GITPNEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMA 64
            + PNEA+    ARLAAAK D   AF+L K +    +AP+LR+Y PAL+ FC R DA  A
Sbjct: 155 NVEPNEATFTNAARLAAAKEDPEMAFELLKQMKRVGIAPKLRSYGPALYGFCARGDAMKA 214

Query: 65  YEVEEHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEW 124
           YEV++ M                  S +    +KVYE LH+LR+ V  V EST  VIE+W
Sbjct: 215 YEVDDDMIESGVMAEEDELCALLEVSVEVKNEDKVYEILHRLRAVVRQVSESTLKVIEDW 274

Query: 125 FRGGEARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXX 184
           F    A  +G     D   +RE                  +W V +T+            
Sbjct: 275 FESEYAMKIGKREW-DDEEIREGFVRGGGGWHGQGWLGSGEWKVVKTN-VDEDGMCLSCS 332

Query: 185 ERLACVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQ 244
           E+L  +DID ++ E F  S++ LA  ++ KANF+ FQ WLEK+  ++A+VDGANVGL   
Sbjct: 333 EKLVSIDIDPKETENFAASLSKLAHEKQPKANFNHFQKWLEKNGPFDAVVDGANVGL--A 390

Query: 245 NFADGGFSTCQLDGVVKEL 263
           N A+  FS  QLD VV++L
Sbjct: 391 NIAE--FSFKQLDYVVRQL 407


>Medtr2g101360.2 | proteinaceous RNase P | HC |
           chr2:43577836-43582278 | 20130731
          Length = 558

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 5   GITPNEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMA 64
            + PNEA+    ARLAAAK D   AF+L K +    +AP+LR+Y PAL+ FC R DA  A
Sbjct: 155 NVEPNEATFTNAARLAAAKEDPEMAFELLKQMKRVGIAPKLRSYGPALYGFCARGDAMKA 214

Query: 65  YEVEEHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEW 124
           YEV++ M                  S +    +KVYE LH+LR+ V  V EST  VIE+W
Sbjct: 215 YEVDDDMIESGVMAEEDELCALLEVSVEVKNEDKVYEILHRLRAVVRQVSESTLKVIEDW 274

Query: 125 FRGGEARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXX 184
           F    A  +G     D   +RE                  +W V +T+            
Sbjct: 275 FESEYAMKIGKREW-DDEEIREGFVRGGGGWHGQGWLGSGEWKVVKTN-VDEDGMCLSCS 332

Query: 185 ERLACVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQ 244
           E+L  +DID ++ E F  S++ LA  ++ KANF+ FQ WLEK+  ++A+VDGANVGL   
Sbjct: 333 EKLVSIDIDPKETENFAASLSKLAHEKQPKANFNHFQKWLEKNGPFDAVVDGANVGL--A 390

Query: 245 NFADGGFSTCQLDGVVKEL 263
           N A+  FS  QLD VV++L
Sbjct: 391 NIAE--FSFKQLDYVVRQL 407


>Medtr8g103380.2 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497827-43502141 | 20130731
          Length = 495

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 41  NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 100

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 101 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 160

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 161 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 218

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 219 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 274

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 275 GKFMPSKINAVVNEL 289


>Medtr8g103380.4 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 41  NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 100

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 101 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 160

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 161 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 218

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 219 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 274

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 275 GKFMPSKINAVVNEL 289


>Medtr8g103380.6 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 41  NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 100

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 101 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 160

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 161 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 218

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 219 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 274

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 275 GKFMPSKINAVVNEL 289


>Medtr8g103380.3 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 41  NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 100

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 101 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 160

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 161 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 218

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 219 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 274

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 275 GKFMPSKINAVVNEL 289


>Medtr8g103380.5 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497831-43502141 | 20130731
          Length = 450

 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 41  NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 100

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 101 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 160

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 161 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 218

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 219 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 274

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 275 GKFMPSKINAVVNEL 289


>Medtr8g103380.1 | Zc3h12a-like ribonuclease NYN domain protein | HC
           | chr8:43497972-43501688 | 20130731
          Length = 668

 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 9   NEASIATVARLAAAKGDASYAFDLAKNVGNYSVAPRLRTYDPALFCFCERLDADMAYEVE 68
           NEA++ +VAR+A A  D   AF++ K +    + PRLR+Y PAL  +C   + D A++VE
Sbjct: 214 NEAALTSVARMAMALSDGDKAFEMVKQMKILGINPRLRSYGPALSTYCNNGEIDKAFDVE 273

Query: 69  EHMXXXXXXXXXXXXXXXXXXSAKRGRGEKVYEYLHKLRSAVSCVGESTAVVIEEWFRGG 128
           +HM                  S + G+ ++VY  LHKLRS+V  V  +TA +I +WF+  
Sbjct: 274 KHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSK 333

Query: 129 EARGVGDAAGLDGGRVREXXXXXXXXXXXXXXXXXXDWVVCRTSXXXXXXXXXXXXERLA 188
            A  VG     D G + +                   W V +TS            + LA
Sbjct: 334 IALKVGKRK-WDNGLIMKAMQNNGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQ-LA 391

Query: 189 CVDIDDEDVEKFGKSIAALAVGREVKANFSEFQAWLEKHTHYEAIVDGANVGLYQQNFAD 248
            +D+D  + E F KS+A++A+  E  +NF  FQ WL+ +  +EA++D ANVGLY Q    
Sbjct: 392 TIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYYGPFEAVIDAANVGLYSQ---- 447

Query: 249 GGFSTCQLDGVVKEL 263
           G F   +++ VV EL
Sbjct: 448 GKFMPSKINAVVNEL 462