Miyakogusa Predicted Gene
- Lj0g3v0081269.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0081269.1 tr|B9HPY6|B9HPY6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_803977 PE=4 SV=1,38.89,6e-18,zinc
finger,Zinc finger, C2H2-like; C2H2 and C2HC zinc fingers,NULL;
zf-C2H2_6,NULL; SUBFAMILY NOT N,CUFF.4207.1
(317 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | H... 393 e-109
Medtr4g109340.1 | C2H2-type zinc finger protein | HC | chr4:4540... 100 2e-21
Medtr5g099040.1 | C2H2-type zinc finger protein | LC | chr5:4338... 91 1e-18
Medtr5g062300.1 | C2H2-type zinc finger protein | HC | chr5:2586... 89 5e-18
Medtr1g090703.1 | C2H2-type zinc finger protein | HC | chr1:4068... 87 2e-17
Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC ... 79 4e-15
Medtr1g067640.1 | C2H2 type zinc finger transcription factor fam... 74 2e-13
Medtr1g067650.1 | C2H2 type zinc finger transcription factor fam... 72 8e-13
Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | H... 70 3e-12
Medtr1g018420.1 | C2H2-type zinc finger protein | HC | chr1:5294... 70 3e-12
Medtr1g106730.1 | C2H2-type zinc finger protein | HC | chr1:4824... 69 7e-12
Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | H... 68 1e-11
Medtr1g062780.1 | C2H2-type zinc finger protein | HC | chr1:2750... 67 2e-11
Medtr1g077730.1 | C2H2-type zinc finger protein | HC | chr1:3471... 66 4e-11
Medtr1g077700.1 | C2H2 and C2HC zinc finger protein | LC | chr1:... 65 1e-10
Medtr1g115345.1 | C2H2-type zinc finger protein | HC | chr1:5205... 61 2e-09
Medtr3g023760.1 | C2H2-type zinc finger protein | HC | chr3:7235... 58 1e-08
Medtr3g102980.1 | C2H2-type zinc finger protein | HC | chr3:4743... 54 2e-07
Medtr2g096540.1 | C2H2 type zinc finger transcription factor fam... 52 7e-07
Medtr4g082980.1 | C2H2-type zinc finger protein | HC | chr4:3226... 50 2e-06
Medtr5g043930.1 | C2H2-type zinc finger protein | HC | chr5:1930... 49 4e-06
>Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | HC |
chr4:9613625-9612168 | 20130731
Length = 485
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 239/333 (71%), Gaps = 30/333 (9%)
Query: 1 MMLSNAIVDPLVAEPEESCASASRDEERRNPMNFIAPLSYRVP-------DKAKGVAKSG 53
MMLSNAIVDPL EPEESCASAS+DEERRNPMNFIAPLSYR+P +KAKGVAK G
Sbjct: 167 MMLSNAIVDPLEVEPEESCASASKDEERRNPMNFIAPLSYRIPYENNNNNNKAKGVAK-G 225
Query: 54 LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAK 113
LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLD N DD EDD+ Q+E + +K
Sbjct: 226 LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDQNPDDSIV--EDDVITQDEFFPSK 283
Query: 114 SNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNAP 173
NSTLQ+DHGT+NN PTL+A VHECSICHRSFSSGQALGGHKRCHWITSNAP
Sbjct: 284 PNSTLQYDHGTSNN-PTLMASSSKRKSK-VHECSICHRSFSSGQALGGHKRCHWITSNAP 341
Query: 174 DTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAPTTNDLARRNVSTEFYLQP-W- 231
DTSTLARFQQFQ+ ++Q+PKFD SSEPIDLKLDLNLPAPT +T+ YLQP W
Sbjct: 342 DTSTLARFQQFQDQIEQIPKFDNSSEPIDLKLDLNLPAPT---------NTQIYLQPTWG 392
Query: 232 ---VATKDDNINSPCQSHHQHLNNQVXXXXXXXXXXXXX---XXXXXXXXXXXXXKVKLA 285
ATKD+ I + Q+ N + KVKLA
Sbjct: 393 ANSSATKDNKIKEDNNNSQQNQNKNLVDQNNETQEKNKNNNLKTLVQNVDNEDDSKVKLA 452
Query: 286 KLSELKD-INIGSSSSPWLQVGIGSTTDVRIDA 317
KLSELKD INIG SSSPWLQVGIG+TTDVR D
Sbjct: 453 KLSELKDVINIGGSSSPWLQVGIGTTTDVRNDT 485
>Medtr4g109340.1 | C2H2-type zinc finger protein | HC |
chr4:45405757-45403067 | 20130731
Length = 516
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 47 KGVAKSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQ 106
K K G FEC C K+F+S+QALGGHRASHKK KGCFA++++++ + E DL
Sbjct: 340 KNFNKRGKFECTTCNKIFHSYQALGGHRASHKKNKGCFASKIESS--ENSIEFETDLSHH 397
Query: 107 E---ELYLAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHK 163
E E L K + +++ N HEC IC + F SGQALGGHK
Sbjct: 398 EPTTESKLMKISDNIEY---VQNMGERETVRDSKKKIKGHHECPICFKVFQSGQALGGHK 454
Query: 164 RCHWITSNAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAPT 213
R H + + + L +E + Q+ F LDLNLPA T
Sbjct: 455 RSHIVATGSESRVVL------EEQVPQIRDF----------LDLNLPAAT 488
>Medtr5g099040.1 | C2H2-type zinc finger protein | LC |
chr5:43383173-43384012 | 20130731
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 55 FECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKS 114
F C C KVF SHQALGGHRASHK VKGCF A + FM
Sbjct: 130 FVCSCCNKVFGSHQALGGHRASHKNVKGCF-ANTTTTITASSNSTTGRTFMTPHDDTMTR 188
Query: 115 NSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHW 167
++ + NNN + H+CSIC R FS+GQALGGHKRCHW
Sbjct: 189 GGNVEVEGEAVNNNEMINCIIG-------HKCSICLRVFSTGQALGGHKRCHW 234
>Medtr5g062300.1 | C2H2-type zinc finger protein | HC |
chr5:25869936-25870676 | 20130731
Length = 246
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 55 FECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKS 114
F C C KVF SHQALGGHRASHK VKGCFAA + DD EE+ +
Sbjct: 119 FVCSCCNKVFGSHQALGGHRASHKNVKGCFAA--NTTHDDNHHPMTRGNVEGEEVNSNNN 176
Query: 115 NSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNAPD 174
N+ H+CSIC R FS+GQALGGHKRCHW P
Sbjct: 177 NNDCIIG----------------------HKCSICLRVFSTGQALGGHKRCHW-DKGEPT 213
Query: 175 TSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDL 207
T TL F P D SS P+ L L L
Sbjct: 214 TPTLPFDLNFPFPPLPPPAPDHSSSPLTLHLRL 246
>Medtr1g090703.1 | C2H2-type zinc finger protein | HC |
chr1:40689061-40690814 | 20130731
Length = 355
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 32 MNFIAPLSYRVPDKA---KGVAKSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARL 88
MN+ S + + A G A ++ECK C + F S QALGGHRASHKK K A+
Sbjct: 130 MNYTKYSSRKFMEAATLDSGRAGFYVYECKTCNRTFPSFQALGGHRASHKKPKALAIAQE 189
Query: 89 DNNLDDGFAGAEDDLFMQ-----EELYLAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXV 143
+L D DD Q + + L +N+ HG +NNN V
Sbjct: 190 KKHLYD------DDQEFQFKPNHKSISLQLNNNGKGNLHGGSNNN----------NKSKV 233
Query: 144 HECSICHRSFSSGQALGGHKRCHW--ITSNAPDTSTLARFQQFQEHLDQVPKFDPSSEPI 201
HECSIC F+SGQALGGH R H + ++A +T+ + D K +
Sbjct: 234 HECSICGSEFTSGQALGGHMRRHRAPVGTSAANTTLSLTTMALEPDEDHPRK---KRNVL 290
Query: 202 DLKLDLNLPAP 212
L LDLNLPAP
Sbjct: 291 SLDLDLNLPAP 301
>Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC |
scaffold0160:20867-19377 | 20130731
Length = 361
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 74/167 (44%), Gaps = 59/167 (35%)
Query: 50 AKSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEEL 109
+ G ++C+ C KVF S+QALGGHRASHKK+K ++ ++E
Sbjct: 235 VRKGRYKCETCNKVFKSYQALGGHRASHKKIK-------------------PNITVEE-- 273
Query: 110 YLAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWIT 169
S+ +F+ VHEC +C R F+SGQALGGHKR H I
Sbjct: 274 ------SSPEFE----------------IVEKKVHECPVCFRVFNSGQALGGHKRTHVIH 311
Query: 170 SNAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAPTTND 216
++ T VP F S +DLNLPAP +D
Sbjct: 312 GSSSTT---------------VPIF-SSKRVTKSVIDLNLPAPIDDD 342
>Medtr1g067640.1 | C2H2 type zinc finger transcription factor family
protein | HC | chr1:29199780-29200410 | 20130731
Length = 170
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 84/197 (42%), Gaps = 50/197 (25%)
Query: 24 RDEERRNPMNF---IAPLSYRVPDKAKGVAKSGLFECKACKKVFNSHQALGGHRASHKKV 80
R+ E + +N + LS R+ + K + FECK C + F+S QALGGHRASHKK+
Sbjct: 5 RENEEKESINLATTLMLLSSRITQQNKTYSPVE-FECKTCNRKFSSFQALGGHRASHKKL 63
Query: 81 KGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKSNSTLQFDHGTTNNNPTLLAXXXXXXX 140
K L EE + NN P +
Sbjct: 64 K---------------------LLDSEEAHKV----------NIHNNKPKM--------- 83
Query: 141 XXVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQEHLDQVPKFDPSSEP 200
H+CSIC + F GQALGGH R H I + +S++ Q V K S
Sbjct: 84 ---HQCSICGQEFKLGQALGGHMRRHRINNEGFSSSSIN--YQVIAKSSPVLKRSNSKRV 138
Query: 201 IDLKLDLNLPAPTTNDL 217
+ ++LDLNL P NDL
Sbjct: 139 MIMELDLNL-TPLENDL 154
>Medtr1g067650.1 | C2H2 type zinc finger transcription factor family
protein | HC | chr1:29206724-29207532 | 20130731
Length = 171
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 70/163 (42%), Gaps = 46/163 (28%)
Query: 55 FECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKS 114
FECK C + F+S QALGGHRASHKK+K L EE +
Sbjct: 39 FECKTCNRKFSSFQALGGHRASHKKLK---------------------LLDSEEAHKV-- 75
Query: 115 NSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNAPD 174
NN P + H+CSIC + F GQALGGH R H I +
Sbjct: 76 --------NIHNNKPKM------------HQCSICGQEFKLGQALGGHMRRHRINNEGFS 115
Query: 175 TSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAPTTNDL 217
+S++ Q V K S + ++LDLNL P NDL
Sbjct: 116 SSSIN--YQVIAKSSPVLKRSNSKRVMIMELDLNL-TPLENDL 155
>Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | HC |
chr4:9546941-9545698 | 20130731
Length = 378
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 53 GLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLA 112
G ++C C KVF S+QALGGHRASHKK K + D ++ E++ +
Sbjct: 218 GRYKCDTCNKVFRSYQALGGHRASHKKNKQVAESGGDYSISQ----------HHEKINIE 267
Query: 113 KSNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNA 172
K+ + + +HEC IC R F+SGQALGGH+R H I +
Sbjct: 268 KNINVSE---------------------KKIHECPICFREFASGQALGGHRRTHNIGFGS 306
Query: 173 PDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAP 212
ST A + V S+ D LDLN PAP
Sbjct: 307 ASASTSAAAITTMVRRN-VKVARVSANVGDSLLDLNFPAP 345
>Medtr1g018420.1 | C2H2-type zinc finger protein | HC |
chr1:5294238-5295310 | 20130731
Length = 232
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 33/113 (29%)
Query: 55 FECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKS 114
++C C K F+S+QALGGH+ASH+K + G DD
Sbjct: 81 YKCSVCNKEFSSYQALGGHKASHRK--------------NSVGGGGDD------------ 114
Query: 115 NSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHW 167
H +T++ T + HECSICHRSF +GQALGGHKRCH+
Sbjct: 115 -------HPSTSSAATTSSANTNGGGVRSHECSICHRSFPTGQALGGHKRCHY 160
>Medtr1g106730.1 | C2H2-type zinc finger protein | HC |
chr1:48248085-48249261 | 20130731
Length = 251
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 41/112 (36%)
Query: 56 ECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKSN 115
+C C K F S+QALGGH+ASH+K + + E + ++ S
Sbjct: 84 KCSVCNKAFPSYQALGGHKASHRKS----------------SSENQSTTVNETISVSVST 127
Query: 116 STLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHW 167
S + HECSICH+SF +GQALGGHKRCH+
Sbjct: 128 SKM-------------------------HECSICHKSFPTGQALGGHKRCHY 154
>Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | HC |
chr7:40244051-40243268 | 20130731
Length = 165
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 75/166 (45%), Gaps = 48/166 (28%)
Query: 51 KSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELY 110
++G +ECK C K F+S QALGGHRASHK++K A E+ ++E+
Sbjct: 30 ENGEYECKTCNKKFSSFQALGGHRASHKRMK--------------LAEGEE---LKEQ-- 70
Query: 111 LAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITS 170
AKS S N P + HECSIC FS GQALGGH R H
Sbjct: 71 -AKSLSLW--------NKPKM------------HECSICGMGFSLGQALGGHMRKHRAVI 109
Query: 171 NAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPAPTTND 216
N +S + +++ P + + LDLNL P ND
Sbjct: 110 NEGVSS-------INQIIEKFPVLKRLNSKRIMGLDLNL-TPLEND 147
>Medtr1g062780.1 | C2H2-type zinc finger protein | HC |
chr1:27509884-27508558 | 20130731
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 54 LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAK 113
L+ECK C + F S QALGGHRASH K + + N+ F+ + Y
Sbjct: 119 LYECKTCNRCFPSFQALGGHRASHTK-----PNKANCNVAQQKQAVTTSSFVDDH-YDPT 172
Query: 114 SNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNAP 173
N+ L T + VHECSIC FSSGQALGGH R H N
Sbjct: 173 MNTILSLQAFAA----TPITTIPTTKKSKVHECSICGAEFSSGQALGGHMRRHRNLVNTS 228
Query: 174 DTSTLARFQQFQEHLDQVPKFDPSSEPID-LKLDLNLPAPTTNDLARRNVSTEFYLQP 230
T+T PK + +P + KLDLNLPAP + + ++F QP
Sbjct: 229 TTTTTTTTSMSLS--IGSPKSHEAKKPRNGFKLDLNLPAPEVDQKDQ----SKFSFQP 280
>Medtr1g077730.1 | C2H2-type zinc finger protein | HC |
chr1:34713835-34714419 | 20130731
Length = 194
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 11 LVAEPEESCASASRDEERRNPMNFIAPLSYRVPDKA-KGVAKSGLFECKACKKVFNSHQA 69
+ A E+ + SR E+++P+ F ++Y + + A+ ++ CK CKK F S QA
Sbjct: 1 MEASHEQQLSLGSR--EQQSPIPFSINIAYSSTEGGTRESARYNVYACKTCKKTFTSFQA 58
Query: 70 LGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAKSNSTLQFDHGTTNNNP 129
LGGHR HKK R D + +E +N ++ + N
Sbjct: 59 LGGHRKVHKK------PRYDRQV--------------QEFQFKTNNKSISLKLNSINGMG 98
Query: 130 TLLA------------------XXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSN 171
+ A V+ CSIC F+SGQALGGH H
Sbjct: 99 NIYASSSSSSNNTSTTTTTNNNSNTNNNKTKVYGCSICGSKFTSGQALGGHMTFHHAPVE 158
Query: 172 APDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPA 211
++ +A Q E ++ P+ + L LDLNLPA
Sbjct: 159 TTSSTPMAL--QPDEEDEEPPR---KKMNVSLDLDLNLPA 193
>Medtr1g077700.1 | C2H2 and C2HC zinc finger protein | LC |
chr1:34710163-34710723 | 20130731
Length = 186
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 65/162 (40%), Gaps = 31/162 (19%)
Query: 50 AKSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEEL 109
A+ ++ CK C K F S QALGGHR KGC DGF
Sbjct: 55 ARYNVYACKTCNKTFTSSQALGGHR------KGC-----QKKPRDGFK------------ 91
Query: 110 YLAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWIT 169
+N ++ + N + A V+ CSIC F+SGQALGGH H
Sbjct: 92 ---INNKSISLKLNSINGMGNIYASSSSSNKSKVYGCSICGSKFTSGQALGGHMTFHHAP 148
Query: 170 SNAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDLKLDLNLPA 211
++ +A ++ K + + L LDLNLPA
Sbjct: 149 VEETSSTPMASEPDEEDEEPPAKKMN-----VPLDLDLNLPA 185
>Medtr1g115345.1 | C2H2-type zinc finger protein | HC |
chr1:52052229-52053348 | 20130731
Length = 205
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 55/131 (41%), Gaps = 38/131 (29%)
Query: 54 LFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDGFAGAEDDLFMQEELYLAK 113
+FECK CK+ F+S QALGGHRASHKK RL DG DD
Sbjct: 44 VFECKTCKRQFSSFQALGGHRASHKK------PRLMEMTSDG-----DD----------- 81
Query: 114 SNSTLQFDHGTTNNNPTLLAXXXXXXXXXVHECSICHRSFSSGQALGGHKRCHWITSNAP 173
HG+ + T H CSIC F GQALGGH R H T ++
Sbjct: 82 -------HHGSILTSTT---------KAKTHACSICGLEFGIGQALGGHMRRHRRTESSK 125
Query: 174 DTSTLARFQQF 184
++ F
Sbjct: 126 ANNSNGNMHNF 136
>Medtr3g023760.1 | C2H2-type zinc finger protein | HC |
chr3:7235345-7233398 | 20130731
Length = 468
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 51 KSGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNNLDDG 95
K G FEC C K F S+QALGGHRASHK+ KG A+R D + ++G
Sbjct: 347 KRGKFECATCNKKFQSYQALGGHRASHKRTKGFSASRNDQSSENG 391
>Medtr3g102980.1 | C2H2-type zinc finger protein | HC |
chr3:47436584-47435455 | 20130731
Length = 236
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 23/25 (92%)
Query: 143 VHECSICHRSFSSGQALGGHKRCHW 167
HECSICH+SF +GQALGGHKRCH+
Sbjct: 141 THECSICHKSFPTGQALGGHKRCHY 165
>Medtr2g096540.1 | C2H2 type zinc finger transcription factor family
protein, putative | HC | chr2:41234502-41235280 |
20130731
Length = 133
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 71/195 (36%), Gaps = 68/195 (34%)
Query: 24 RDEERRNPMNFIAPLSYRVPDKAKGVAKSGLFECKACKKVFNSHQALGGHRASHKKVKGC 83
R E ++ +N + LS K K F+CK C K F+S QALGGHRASHK+ K
Sbjct: 3 RGREDKSELNCLMLLSKVGETKEPNTLKECGFKCKTCNKEFSSFQALGGHRASHKRPK-- 60
Query: 84 FAARLDNNLDDGFAGAEDDLFMQEELYLAKSNSTLQFDHGTTNNNPTLLAXXXXXXXXXV 143
+ N P +
Sbjct: 61 ------------------------------------LMYKLPNMKPKM------------ 72
Query: 144 HECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDL 203
H C IC FS GQALGGH R H S+ + F++ ++ E ++
Sbjct: 73 HPCPICGLEFSIGQALGGHMRKH--------NSSFSIFKKSKKD---------HCERLNF 115
Query: 204 KLDLNLPAPTTNDLA 218
LDLNL P N L
Sbjct: 116 CLDLNL-TPLENGLV 129
>Medtr4g082980.1 | C2H2-type zinc finger protein | HC |
chr4:32267388-32265780 | 20130731
Length = 450
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Query: 144 HECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQEHLDQVPKFDPSSEPIDL 203
+EC IC++ F SGQALGGHKR H++ + +T + K ++ +
Sbjct: 393 YECPICYKIFRSGQALGGHKRSHFVGGSEENTFVI--------------KQAAAAVAVPC 438
Query: 204 KLDLNLPAPT 213
+DLNLPAP
Sbjct: 439 LIDLNLPAPV 448
>Medtr5g043930.1 | C2H2-type zinc finger protein | HC |
chr5:19301858-19300119 | 20130731
Length = 514
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 144 HECSICHRSFSSGQALGGHKRCHWITSNAPDT 175
HEC IC++ F SGQALGGHKR H+I N +T
Sbjct: 436 HECPICNKIFKSGQALGGHKRSHFIGGNDDNT 467