Miyakogusa Predicted Gene

Lj0g3v0081119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081119.1 Non Characterized Hit- tr|K4DB24|K4DB24_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.83,3e-17,seg,NULL; DUF1635,Protein of unknown function
DUF1635; coiled-coil,NULL,CUFF.4186.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096360.1 | DUF1635 family protein | HC | chr2:41161437-41...   176   2e-44
Medtr4g063070.1 | zinc finger, C3HC4 type (RING finger) protein ...   142   4e-34
Medtr4g057470.1 | DUF1635 family protein | HC | chr4:21011253-21...    75   9e-14
Medtr2g084270.1 | DUF1635 family protein | HC | chr2:35449202-35...    69   5e-12
Medtr1g090663.1 | DUF1635 family protein | HC | chr1:40605734-40...    61   1e-09

>Medtr2g096360.1 | DUF1635 family protein | HC |
           chr2:41161437-41159586 | 20130731
          Length = 261

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/277 (41%), Positives = 149/277 (53%), Gaps = 26/277 (9%)

Query: 1   MEDQLGSICDLHEGYEQLRQKLFDTMLELETMRNVKAELSKLLQIAYQERDQAREQLHSL 60
           ME  LGSI    E  +QLR KL DT+ ELE  RNVK EL  +L+IAY+ERDQAREQL  L
Sbjct: 1   MEYPLGSIFSYQESSDQLRLKLIDTIAELENTRNVKDELLNMLEIAYKERDQAREQLQIL 60

Query: 61  AKKLVPANSNALLENLPEFPPAIKAXXXXXXXXXXXXXX------XXPVTPLLQPVSPSP 114
            KKL  +NSN   E                                 PV   ++ VS SP
Sbjct: 61  VKKLASSNSNMFYEVQQNNNNNNVVMFQSTKAKSSITESNSPSHVSSPVDSFIEAVS-SP 119

Query: 115 EFSXXXXXXXXXHYNFGFQKPAT---IDFESSVIDYLAKGKVLPQKGKLVEAVRDAGSLL 171
           EFS         H  + F +      +D  S V+D LA+GKVLPQKGKL++AV +AG LL
Sbjct: 120 EFSNVGVDS---HNKYFFNQTLVHDEVDVASRVVDSLARGKVLPQKGKLLDAVINAGPLL 176

Query: 172 ETLLVAGPLPKWRNPPPLTSLKIPPLNIKEYDSLTPASKLNSFGNWWDSAQKPTFLPSSH 231
           + L+++GPLP W+NPPPL+S+KIPP +++E        +LN F N        +  PS H
Sbjct: 177 QNLVLSGPLPTWKNPPPLSSIKIPPFSVEE-----DIDELNLFQN--------STHPSFH 223

Query: 232 SSEPLPMLNFAGSSFGSWNKQLQMTSKASVARNQHRL 268
           SS  LP+ N A  +  S N   Q TS +S+ + +H+ 
Sbjct: 224 SSGSLPIRNAADVTPSSCNNAWQFTSSSSLKKQKHQC 260


>Medtr4g063070.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr4:23325580-23322150 | 20130731
          Length = 396

 Score =  142 bits (358), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 116/211 (54%), Gaps = 11/211 (5%)

Query: 3   DQLGSICDLHEGYEQLRQKLFDTMLELETMRNVKAELSKLLQIAYQERDQAREQLHSLAK 62
           ++L S+    E   +LRQKL DT LELE M+N+K EL  LL+ AY ERD+A+ QL  L  
Sbjct: 2   EELDSVFIYQEREHELRQKLIDTTLELEAMKNMKTELFNLLKTAYLERDEAKNQLQKLMN 61

Query: 63  KLVPAN-SNALLENLP-EFPPAIKAXXXXXXXXXXXXXXXXPVTPLLQPVSPSPEFSXXX 120
              P +  +  +     E P    +                PV    + VS SPEFS   
Sbjct: 62  NPSPIHFQDKFISGFQQENPLMFHSSNPSITESSSLSHGSPPVDSFFETVS-SPEFSNTN 120

Query: 121 XXXXXXHYNFGF-------QKPATIDFESSVIDYLAKGKVLPQKGKLVEAVRDAGSLLET 173
                 H N  F       +KP + D  +  ID +AK KVLPQKGKL++AV DAG LL+T
Sbjct: 121 MAYLNHHQNQHFNYLRVPSEKPVS-DHGTVAIDSIAKEKVLPQKGKLLQAVIDAGPLLQT 179

Query: 174 LLVAGPLPKWRNPPPLTSLKIPPLNIKEYDS 204
           +L+AGPLP W NPPPL  +++PPLNIK YD+
Sbjct: 180 ILLAGPLPTWSNPPPLNDIQVPPLNIKVYDN 210


>Medtr4g057470.1 | DUF1635 family protein | HC |
           chr4:21011253-21009541 | 20130731
          Length = 253

 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 47/57 (82%), Gaps = 1/57 (1%)

Query: 144 VIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRN-PPPLTSLKIPPLNI 199
           +ID +AK K LP+KGKL++AV  AG LL+TLL+AGPLP+WR+ PPPL S +IPP+ I
Sbjct: 143 MIDSIAKDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTI 199


>Medtr2g084270.1 | DUF1635 family protein | HC |
           chr2:35449202-35451256 | 20130731
          Length = 240

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 48/61 (78%), Gaps = 1/61 (1%)

Query: 140 FESSVIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRN-PPPLTSLKIPPLN 198
            + S+I+ L   + LP+KGKL++AV  AG LL+TLL+AGPLP+W++ PPPL S +IPP++
Sbjct: 130 IDQSMIEVLTPNRPLPEKGKLLQAVMKAGPLLKTLLLAGPLPQWKHPPPPLESFEIPPVS 189

Query: 199 I 199
           I
Sbjct: 190 I 190


>Medtr1g090663.1 | DUF1635 family protein | HC |
           chr1:40605734-40606846 | 20130731
          Length = 226

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 42/48 (87%), Gaps = 1/48 (2%)

Query: 148 LAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRNPPP-LTSLKI 194
           LA+ K LP+KGKL++AV +AG LL+TLL+AGPLP+W++PPP L S++I
Sbjct: 122 LAEKKPLPEKGKLLKAVVEAGPLLQTLLLAGPLPQWQHPPPQLNSIEI 169