Miyakogusa Predicted Gene

Lj0g3v0081029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081029.1 tr|B9IF24|B9IF24_POPTR Methionine sulfoxide
reductase type (Fragment) OS=Populus trichocarpa
GN=Ptrc,69.12,2e-19,no description,Peptide methionine sulphoxide
reductase MsrA; PEPTIDE METHIONINE SULFOXIDE REDUCTASE,,CUFF.4194.1
         (95 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092680.4 | peptide methionine sulfoxide reductase family ...   176   4e-45
Medtr5g092680.3 | peptide methionine sulfoxide reductase family ...   176   4e-45
Medtr5g092680.7 | peptide methionine sulfoxide reductase family ...   176   4e-45
Medtr5g092680.2 | peptide methionine sulfoxide reductase family ...   171   9e-44
Medtr5g092680.5 | peptide methionine sulfoxide reductase family ...   171   9e-44
Medtr5g092680.6 | peptide methionine sulfoxide reductase family ...   171   9e-44
Medtr5g092680.1 | peptide methionine sulfoxide reductase family ...   171   9e-44
Medtr3g051460.1 | peptide methionine sulfoxide reductase family ...   155   7e-39
Medtr3g051460.2 | peptide methionine sulfoxide reductase family ...   155   7e-39
Medtr3g051460.3 | peptide methionine sulfoxide reductase family ...   145   1e-35
Medtr3g051460.4 | peptide methionine sulfoxide reductase family ...   134   1e-32
Medtr3g075380.1 | peptide methionine sulfoxide reductase family ...   103   5e-23

>Medtr5g092680.4 | peptide methionine sulfoxide reductase family
           protein | HC | chr5:40488534-40485539 | 20130731
          Length = 265

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 88/94 (93%)

Query: 2   PSMNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGV 61
           PSMNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV
Sbjct: 62  PSMNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGV 121

Query: 62  TKTEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
           +KTEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 122 SKTEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 155


>Medtr5g092680.3 | peptide methionine sulfoxide reductase family
           protein | HC | chr5:40488534-40485539 | 20130731
          Length = 265

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 88/94 (93%)

Query: 2   PSMNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGV 61
           PSMNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV
Sbjct: 62  PSMNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGV 121

Query: 62  TKTEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
           +KTEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 122 SKTEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 155


>Medtr5g092680.7 | peptide methionine sulfoxide reductase family
           protein | HC | chr5:40488501-40485562 | 20130731
          Length = 264

 Score =  176 bits (446), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 88/94 (93%)

Query: 2   PSMNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGV 61
           PSMNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV
Sbjct: 61  PSMNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGV 120

Query: 62  TKTEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
           +KTEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 121 SKTEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 154


>Medtr5g092680.2 | peptide methionine sulfoxide reductase family
          protein | HC | chr5:40488501-40485562 | 20130731
          Length = 202

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 86/92 (93%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          MNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV+K
Sbjct: 1  MNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGVSK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 61 TEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 92


>Medtr5g092680.5 | peptide methionine sulfoxide reductase family
          protein | HC | chr5:40488534-40485539 | 20130731
          Length = 202

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 86/92 (93%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          MNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV+K
Sbjct: 1  MNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGVSK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 61 TEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 92


>Medtr5g092680.6 | peptide methionine sulfoxide reductase family
          protein | HC | chr5:40488534-40485539 | 20130731
          Length = 202

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 86/92 (93%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          MNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV+K
Sbjct: 1  MNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGVSK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 61 TEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 92


>Medtr5g092680.1 | peptide methionine sulfoxide reductase family
          protein | HC | chr5:40488522-40485539 | 20130731
          Length = 202

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 86/92 (93%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          MNLLN+LGFGS RS E+MDS+I QGPDDDIPAPGQQFAQFGAGCFWGVEL FQRVPGV+K
Sbjct: 1  MNLLNKLGFGSGRSSESMDSTIPQGPDDDIPAPGQQFAQFGAGCFWGVELVFQRVPGVSK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGY+QG+LHNP+YEDV SGTTNH E+VRVQ
Sbjct: 61 TEVGYTQGLLHNPTYEDVCSGTTNHNEVVRVQ 92


>Medtr3g051460.1 | peptide methionine sulfoxide reductase family
          protein | HC | chr3:20366003-20362761 | 20130731
          Length = 202

 Score =  155 bits (393), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 72/92 (78%), Positives = 77/92 (83%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          M LLNRL FGS R  E MDSSIAQG DDD PA GQQFAQFGAGCFW VELAFQRV GVTK
Sbjct: 1  MYLLNRLWFGSARVTEKMDSSIAQGLDDDTPALGQQFAQFGAGCFWSVELAFQRVAGVTK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGYSQG+LHNP Y+DV S TT H+E+VR+Q
Sbjct: 61 TEVGYSQGLLHNPRYQDVCSATTRHSEVVRLQ 92


>Medtr3g051460.2 | peptide methionine sulfoxide reductase family
          protein | HC | chr3:20365979-20362784 | 20130731
          Length = 202

 Score =  155 bits (393), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 72/92 (78%), Positives = 77/92 (83%)

Query: 4  MNLLNRLGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTK 63
          M LLNRL FGS R  E MDSSIAQG DDD PA GQQFAQFGAGCFW VELAFQRV GVTK
Sbjct: 1  MYLLNRLWFGSARVTEKMDSSIAQGLDDDTPALGQQFAQFGAGCFWSVELAFQRVAGVTK 60

Query: 64 TEVGYSQGILHNPSYEDVSSGTTNHAEIVRVQ 95
          TEVGYSQG+LHNP Y+DV S TT H+E+VR+Q
Sbjct: 61 TEVGYSQGLLHNPRYQDVCSATTRHSEVVRLQ 92


>Medtr3g051460.3 | peptide methionine sulfoxide reductase family
           protein | HC | chr3:20366003-20362761 | 20130731
          Length = 237

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 72/86 (83%)

Query: 10  LGFGSTRSPENMDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYS 69
           L FGS R  E MDSSIAQG DDD PA GQQFAQFGAGCFW VELAFQRV GVTKTEVGYS
Sbjct: 42  LWFGSARVTEKMDSSIAQGLDDDTPALGQQFAQFGAGCFWSVELAFQRVAGVTKTEVGYS 101

Query: 70  QGILHNPSYEDVSSGTTNHAEIVRVQ 95
           QG+LHNP Y+DV S TT H+E+VR+Q
Sbjct: 102 QGLLHNPRYQDVCSATTRHSEVVRLQ 127


>Medtr3g051460.4 | peptide methionine sulfoxide reductase family
          protein | HC | chr3:20364912-20362761 | 20130731
          Length = 185

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 61/75 (81%), Positives = 66/75 (88%)

Query: 21 MDSSIAQGPDDDIPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGILHNPSYED 80
          MDSSIAQG DDD PA GQQFAQFGAGCFW VELAFQRV GVTKTEVGYSQG+LHNP Y+D
Sbjct: 1  MDSSIAQGLDDDTPALGQQFAQFGAGCFWSVELAFQRVAGVTKTEVGYSQGLLHNPRYQD 60

Query: 81 VSSGTTNHAEIVRVQ 95
          V S TT H+E+VR+Q
Sbjct: 61 VCSATTRHSEVVRLQ 75


>Medtr3g075380.1 | peptide methionine sulfoxide reductase family
          protein | HC | chr3:34310316-34310979 | 20130731
          Length = 196

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 1/77 (1%)

Query: 20 NMDSSIAQGPDDDIP-APGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYSQGILHNPSY 78
          N + + A  PD DIP  P  +FA+FGAGCFWGVELAFQRVPGV KTEVGY+QG   +P+Y
Sbjct: 8  NGNHNTAFDPDLDIPDNPDDEFAEFGAGCFWGVELAFQRVPGVVKTEVGYTQGHTPDPNY 67

Query: 79 EDVSSGTTNHAEIVRVQ 95
          + V +GTTNH E+VRVQ
Sbjct: 68 KLVCTGTTNHVEVVRVQ 84