Miyakogusa Predicted Gene

Lj0g3v0080979.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080979.2 Non Characterized Hit- tr|B9RSM2|B9RSM2_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus
communis,34.08,7e-19,coiled-coil,NULL,CUFF.4175.2
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...   148   3e-36
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...   143   9e-35

>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 115/176 (65%), Gaps = 6/176 (3%)

Query: 1   MEEGEAETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GEA  ILR L+RKQNLR G+N L VEFQ +LLTL+ + S +ES SLT  +G  SWL 
Sbjct: 358 LKKGEAGAILRALLRKQNLRRGQNALVVEFQIKLLTLIVSDSDNESSSLTAGNGKNSWLK 417

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCNLSLCDKLRLLTFICDEVLNSEKVRSHIEKE 120
            L DL  +S   LKDFP + LN+G+SGY +L L  KL LL FICDE L + K+RS+I+ +
Sbjct: 418 VLEDLITESGAALKDFPADWLNKGISGYNDLDLPKKLILLNFICDEALGTMKLRSYIDDQ 477

Query: 121 NLNIEKQRKEAKALFAVAKEK------NLLEETAKTVHSNGDPGSSTEQDAVVLKL 170
           N  + ++ K AK+  A AKEK       L +E AK   SNG   S +E DA+V K+
Sbjct: 478 NAILAEEMKAAKSKVAEAKEKEKSLKQKLQDEMAKAAISNGTNLSISEYDALVSKI 533


>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 115/176 (65%), Gaps = 6/176 (3%)

Query: 1   MEEGEAETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GEA  +LR L+RKQNLR G+NTL VEFQ +LLTL+ + S  ES SLT  +G  SWL 
Sbjct: 458 VKKGEAVAVLRALIRKQNLRRGQNTLVVEFQIKLLTLIVSDSETESSSLTASNGKNSWLK 517

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCNLSLCDKLRLLTFICDEVLNSEKVRSHIEKE 120
            L DL  +S   LK+FP + LN+G+SGY +L L  KL LL FICDE L++ K+R+ I+ +
Sbjct: 518 VLEDLITESDAALKEFPADWLNKGISGYYDLDLSKKLILLNFICDEALSTMKLRNFIDDQ 577

Query: 121 NLNIEKQRKEAKALFAVAKEK------NLLEETAKTVHSNGDPGSSTEQDAVVLKL 170
           N    +++K AK+  + AKEK       L +E A  V S+G   S +E DA++ K+
Sbjct: 578 NARFAEEKKAAKSKVSDAKEKERSLKQKLQDEIANAVVSSGASLSISEHDALLAKI 633