Miyakogusa Predicted Gene

Lj0g3v0080099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080099.1 Non Characterized Hit- tr|I1JPU8|I1JPU8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44069
PE,54.84,0.000005,seg,NULL,NODE_64900_length_393_cov_31.951654.path2.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g103250.1 | transmembrane protein, putative | HC | chr7:41...    47   5e-06

>Medtr7g103250.1 | transmembrane protein, putative | HC |
          chr7:41752527-41752829 | 20130731
          Length = 100

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 24/33 (72%)

Query: 26 MKLLLFMVPLVFVTGLICVKGPNPSSWVHTRKP 58
          MKLLLFMVPL+ V GL+ V GPNPS+W     P
Sbjct: 11 MKLLLFMVPLIIVAGLVSVLGPNPSNWTSIPNP 43