Miyakogusa Predicted Gene

Lj0g3v0079939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079939.1 tr|A4S6J9|A4S6J9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_88968,37.33,2e-18,seg,NULL; UNCHARACTERIZED,NULL,CUFF.4110.1
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC | ch...   470   e-133
Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC | ch...   302   3e-82
Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC | ch...   298   3e-81
Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC | ch...   298   5e-81

>Medtr4g094110.1 | LMBR1 integral membrane-like protein | HC |
           chr4:37281984-37276654 | 20130731
          Length = 709

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 233/315 (73%), Positives = 260/315 (82%), Gaps = 12/315 (3%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           MYMCVCTY+SLFKMG  MFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLIN+GGDR
Sbjct: 397 MYMCVCTYYSLFKMGMFMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINIGGDR 456

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
           KT+FEK+MGNIDDAVPFFGKGFNKIYP+IMVIYTSLIAGNFFNRVI YCGNW+IFKFSDD
Sbjct: 457 KTVFEKKMGNIDDAVPFFGKGFNKIYPLIMVIYTSLIAGNFFNRVINYCGNWKIFKFSDD 516

Query: 121 AEDMDGFDPSGVIILQRERSLIQQGHKVGELVFPLARSFSMSVDVESASGTAMVLDESI- 179
           AEDMDGFDPSGVIILQ+ERSL+QQGHKVGELVFPLARSFSMS+DVES +  A  LDES+ 
Sbjct: 517 AEDMDGFDPSGVIILQKERSLLQQGHKVGELVFPLARSFSMSMDVESVNNRAKALDESVA 576

Query: 180 ----NTNLVEAENEGTQSELSRKISSRKYAALRPNLNEEDSSKDLNQEGVSSSLTNDAXX 235
                T +VE +NE  ++++SRKI  RKY+ALR NLNEE SSKD   E  SSSLTND+  
Sbjct: 577 SEDKTTIMVETKNE--EADMSRKIGGRKYSALRTNLNEEGSSKDFTLEINSSSLTNDS-- 632

Query: 236 XXXXXXXXXXALASKWTSMMHGLKSFRSNMDSNRFIPLGNAQTSTHSHPSS---ESLDDI 292
                      + SKW SMMHG K+ +SN+DSN+F+PL N  T T S  S+   ESLDDI
Sbjct: 633 HPDTSSAPSSVITSKWESMMHGFKNLKSNIDSNKFLPLSNNNTYTSSLNSTSSFESLDDI 692

Query: 293 FERLKLPPSEHRDSG 307
           FERLK PPSEH+DSG
Sbjct: 693 FERLKRPPSEHKDSG 707


>Medtr3g086840.1 | LMBR1 integral membrane-like protein | HC |
           chr3:39370616-39360812 | 20130731
          Length = 720

 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 162/317 (51%), Positives = 212/317 (66%), Gaps = 22/317 (6%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           MYMC+CTY+SLFK+G +MFYSLTPRQTSSV+LLMICSMVARYA PISYNFLNLI LG ++
Sbjct: 397 MYMCICTYYSLFKIGMLMFYSLTPRQTSSVNLLMICSMVARYAPPISYNFLNLIRLGPNK 456

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
           +TIFEKRMGNID+AVP FG  FNKIYP+IMV YT L+A NFF++V  + G+W+ + F  +
Sbjct: 457 ETIFEKRMGNIDNAVPLFGDKFNKIYPLIMVTYTVLVASNFFDKVFNFLGSWKRYIFKTE 516

Query: 121 AEDMDGFDPSGVIILQRERSLIQQGHKVG-ELVFPLARSFSMSVDVESASG--------- 170
           AEDMDG DPSG+IILQ+ERS ++QG K+G E V PLAR+F+  +D+ES +          
Sbjct: 517 AEDMDGLDPSGIIILQKERSWLEQGRKIGEEQVVPLARNFN-GLDIESGNNYVERNGVEM 575

Query: 171 --TAMVLDESINTNLVEAENEGTQSE-LSRKISSRKYAALRPNLNEEDSSKDLNQE---- 223
             T+ ++ E +N  + +  +E T+    SR+  S KYAA+R    +  SS  L  E    
Sbjct: 576 KTTSDLITEEVNGGISKTMDEETRRYGSSREAISSKYAAIR---GQGGSSSKLKAEEKNV 632

Query: 224 GVSSSLTNDAXXXXXXXXXXXXALASKWTSMMHGLKSFRSNMDSNRFIPLGNAQTSTHSH 283
              S L   +             LAS W +M  G +SF+SN+ + +F+PL     +T S 
Sbjct: 633 ASYSGLDEGSSNSRNSAGAPSSGLASTWQTMKTGFQSFKSNIGAKKFLPLRQTLENTVSR 692

Query: 284 -PSSESLDDIFERLKLP 299
             SSESLD+IF+RLK P
Sbjct: 693 GSSSESLDEIFQRLKQP 709


>Medtr8g089925.2 | LMBR1 integral membrane-like protein | HC |
           chr8:37556162-37548952 | 20130731
          Length = 592

 Score =  298 bits (764), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 204/315 (64%), Gaps = 18/315 (5%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           MYMC+CTYFSLFK+G +MFYSLTPRQTS V+LLMICSM+ARYA P+SYNFLNLI LG  +
Sbjct: 267 MYMCICTYFSLFKIGRLMFYSLTPRQTSPVNLLMICSMIARYAPPVSYNFLNLIRLGSHK 326

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
            TIFE+RMGNID+AVPFFG  FNKI+P+IMVIYT L+A NFF++V  + G WR + F  +
Sbjct: 327 TTIFEQRMGNIDNAVPFFGDKFNKIFPLIMVIYTLLVASNFFDKVFDFLGGWRRYIFKTE 386

Query: 121 AEDMDGFDPSGVIILQRERSLIQQGHKVGELVFPLARSFSMSVDVES-----------AS 169
           AEDMDGF+PSG+IILQ+ER  ++QG KVGE V PLAR+F+ S+DVES             
Sbjct: 387 AEDMDGFNPSGLIILQKERYWLEQGRKVGEQVVPLARNFN-SIDVESNNNIMEQNDVEMK 445

Query: 170 GTAMVLDESINTNLVEAENEGTQS-ELSRKISSRKYAALRPNLNEEDSSK--DLNQEGVS 226
           GT+ +++  IN  L +   E T+    S +  SRKYA +R    +    K  + N +   
Sbjct: 446 GTSTLINAEINGRLSKTLKEETRRYSSSSEAISRKYAGVRQQSGQASKLKAEERNLDSAK 505

Query: 227 SSLTNDAXXXXXXXXXXXXALASKWTSMMHGLKSFRSNMDSNR-FIPLGNAQTSTHSH-P 284
            SL  D              L S W ++  G  SF++++   + F+P    Q    SH  
Sbjct: 506 VSLL-DKGNTHYGNTSGTYGLGSTWQTLKKGFTSFKADIGGAKGFLPTRQTQQDMISHVS 564

Query: 285 SSESLDDIFERLKLP 299
           SSESLDDIF RLK P
Sbjct: 565 SSESLDDIFLRLKQP 579


>Medtr8g089925.1 | LMBR1 integral membrane-like protein | HC |
           chr8:37558335-37548952 | 20130731
          Length = 722

 Score =  298 bits (762), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 204/315 (64%), Gaps = 18/315 (5%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           MYMC+CTYFSLFK+G +MFYSLTPRQTS V+LLMICSM+ARYA P+SYNFLNLI LG  +
Sbjct: 397 MYMCICTYFSLFKIGRLMFYSLTPRQTSPVNLLMICSMIARYAPPVSYNFLNLIRLGSHK 456

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
            TIFE+RMGNID+AVPFFG  FNKI+P+IMVIYT L+A NFF++V  + G WR + F  +
Sbjct: 457 TTIFEQRMGNIDNAVPFFGDKFNKIFPLIMVIYTLLVASNFFDKVFDFLGGWRRYIFKTE 516

Query: 121 AEDMDGFDPSGVIILQRERSLIQQGHKVGELVFPLARSFSMSVDVES-----------AS 169
           AEDMDGF+PSG+IILQ+ER  ++QG KVGE V PLAR+F+ S+DVES             
Sbjct: 517 AEDMDGFNPSGLIILQKERYWLEQGRKVGEQVVPLARNFN-SIDVESNNNIMEQNDVEMK 575

Query: 170 GTAMVLDESINTNLVEAENEGTQS-ELSRKISSRKYAALRPNLNEEDSSK--DLNQEGVS 226
           GT+ +++  IN  L +   E T+    S +  SRKYA +R    +    K  + N +   
Sbjct: 576 GTSTLINAEINGRLSKTLKEETRRYSSSSEAISRKYAGVRQQSGQASKLKAEERNLDSAK 635

Query: 227 SSLTNDAXXXXXXXXXXXXALASKWTSMMHGLKSFRSNMDSNR-FIPLGNAQTSTHSH-P 284
            SL  D              L S W ++  G  SF++++   + F+P    Q    SH  
Sbjct: 636 VSLL-DKGNTHYGNTSGTYGLGSTWQTLKKGFTSFKADIGGAKGFLPTRQTQQDMISHVS 694

Query: 285 SSESLDDIFERLKLP 299
           SSESLDDIF RLK P
Sbjct: 695 SSESLDDIFLRLKQP 709