Miyakogusa Predicted Gene
- Lj0g3v0079829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0079829.1 tr|B9MZK2|B9MZK2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595495 PE=4
SV=1,31.76,5e-19,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT,CUFF.4097.1
(180 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 216 1e-56
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 207 3e-54
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 207 5e-54
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 207 5e-54
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 207 5e-54
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 205 2e-53
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 204 3e-53
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 204 3e-53
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 5e-53
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 203 6e-53
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 203 6e-53
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 203 6e-53
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 203 7e-53
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 203 7e-53
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 202 2e-52
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 2e-52
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 201 3e-52
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 201 3e-52
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 201 4e-52
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 200 5e-52
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 200 6e-52
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 199 1e-51
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 198 2e-51
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 198 2e-51
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 198 2e-51
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 196 7e-51
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 196 8e-51
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 194 4e-50
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 193 6e-50
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 191 3e-49
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 6e-49
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 189 2e-48
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 187 6e-48
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 187 7e-48
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 186 7e-48
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 186 8e-48
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 186 1e-47
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 185 2e-47
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 185 3e-47
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 184 3e-47
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 184 4e-47
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 184 4e-47
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 184 5e-47
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 184 5e-47
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 6e-47
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 182 2e-46
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 180 6e-46
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 179 9e-46
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 177 4e-45
Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |... 173 9e-44
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 172 1e-43
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 1e-42
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 160 5e-40
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 157 5e-39
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 147 7e-36
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 145 1e-35
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 145 3e-35
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 145 3e-35
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 143 1e-34
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 141 4e-34
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 7e-34
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 1e-33
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 6e-33
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 137 7e-33
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 132 1e-31
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 126 9e-30
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 124 4e-29
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 1e-28
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 1e-28
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 2e-28
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 1e-27
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 111 3e-25
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 108 3e-24
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 107 4e-24
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 107 9e-24
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 2e-23
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 2e-23
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 105 2e-23
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 105 3e-23
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 100 6e-22
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 98 5e-21
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 7e-21
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 9e-21
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 96 2e-20
Medtr1g034440.1 | PPR superfamily protein | LC | chr1:12539755-1... 95 3e-20
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 95 3e-20
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 3e-20
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 95 4e-20
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 6e-20
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 93 1e-19
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 92 2e-19
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 92 3e-19
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 92 3e-19
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 92 3e-19
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 3e-19
Medtr3g030490.1 | PPR superfamily protein, putative | LC | chr3:... 92 4e-19
Medtr5g008255.1 | ATP-binding; nucleic acid-binding; helicase, p... 91 4e-19
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 1e-18
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 1e-18
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 1e-18
Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-282396... 89 2e-18
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 88 4e-18
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 88 5e-18
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 88 6e-18
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 87 7e-18
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 87 8e-18
Medtr6g092390.1 | PPR repeat protein | LC | chr6:34782856-347858... 87 1e-17
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 86 2e-17
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 86 2e-17
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 86 2e-17
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 2e-17
Medtr3g086470.1 | proton gradient regulation protein, putative |... 86 3e-17
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 86 3e-17
Medtr1g054655.1 | PPR superfamily protein | LC | chr1:23786289-2... 85 3e-17
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 85 3e-17
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 85 3e-17
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 85 3e-17
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 85 3e-17
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 85 3e-17
Medtr1g064380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 4e-17
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 85 4e-17
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 85 4e-17
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 85 4e-17
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 5e-17
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 84 5e-17
Medtr1g034420.1 | PPR superfamily protein | LC | chr1:12536372-1... 84 6e-17
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 84 6e-17
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 84 6e-17
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 7e-17
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 84 7e-17
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 84 8e-17
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 83 2e-16
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 83 2e-16
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 83 2e-16
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 82 2e-16
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 82 2e-16
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 82 2e-16
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 82 3e-16
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 3e-16
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 82 4e-16
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 82 4e-16
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 4e-16
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 5e-16
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 6e-16
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 7e-16
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 80 9e-16
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 80 1e-15
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 80 1e-15
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 79 2e-15
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 79 2e-15
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 79 3e-15
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 78 4e-15
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 78 5e-15
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 5e-15
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr1g105580.1 | PPR domain protein | LC | chr1:47566832-475695... 78 6e-15
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 77 8e-15
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 77 8e-15
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 77 9e-15
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 77 1e-14
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 77 1e-14
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 77 1e-14
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 77 1e-14
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 77 1e-14
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 2e-14
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 75 3e-14
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 75 3e-14
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 3e-14
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 75 4e-14
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 75 4e-14
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 75 4e-14
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 75 5e-14
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 74 5e-14
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 74 5e-14
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 6e-14
Medtr3g030390.1 | PPR superfamily protein | HC | chr3:9629253-96... 74 6e-14
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 74 9e-14
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 74 9e-14
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 73 1e-13
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 73 1e-13
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 73 1e-13
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 73 2e-13
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 73 2e-13
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 2e-13
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 72 3e-13
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 72 3e-13
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 72 3e-13
Medtr3g104020.1 | PPR superfamily protein | LC | chr3:47925706-4... 72 4e-13
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 72 4e-13
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 72 4e-13
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 72 4e-13
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 72 4e-13
Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 4e-13
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 71 4e-13
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 70 8e-13
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 70 8e-13
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 1e-12
Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 1e-12
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 2e-12
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 69 2e-12
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 69 2e-12
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 2e-12
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 69 2e-12
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 69 3e-12
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 69 3e-12
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 69 3e-12
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 4e-12
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 68 4e-12
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 68 4e-12
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 5e-12
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 68 5e-12
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 68 5e-12
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 68 5e-12
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 6e-12
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 68 6e-12
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 67 6e-12
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 67 7e-12
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 67 8e-12
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 66 1e-11
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 66 1e-11
Medtr1g054690.1 | hypothetical protein | LC | chr1:23824181-2382... 66 2e-11
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 66 2e-11
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 65 3e-11
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 65 4e-11
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 65 4e-11
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 65 4e-11
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 64 8e-11
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 64 8e-11
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 64 8e-11
Medtr1g085280.1 | ribosomal protein L15 | HC | chr1:38067122-380... 64 8e-11
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 63 1e-10
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 1e-10
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 63 1e-10
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 1e-10
Medtr8g098445.1 | PPR containing plant-like protein | HC | chr8:... 63 1e-10
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 3e-10
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 62 3e-10
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 3e-10
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 62 4e-10
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 62 4e-10
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 61 6e-10
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 61 6e-10
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 8e-10
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 60 9e-10
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 60 9e-10
Medtr7g085430.1 | hypothetical protein | LC | chr7:33098332-3309... 60 9e-10
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 60 1e-09
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 60 1e-09
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 60 1e-09
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 60 1e-09
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 60 1e-09
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 1e-09
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 60 1e-09
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 1e-09
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 60 1e-09
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 60 1e-09
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 60 1e-09
Medtr7g100550.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 60 2e-09
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 59 2e-09
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 59 2e-09
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 59 2e-09
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 59 2e-09
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 59 3e-09
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 59 3e-09
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 58 4e-09
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 58 4e-09
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 58 4e-09
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 58 5e-09
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 58 5e-09
Medtr1g033450.1 | PPR containing plant-like protein | HC | chr1:... 58 5e-09
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 58 6e-09
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 58 6e-09
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 58 6e-09
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 58 6e-09
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 57 6e-09
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 57 7e-09
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 57 8e-09
Medtr0086s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 8e-09
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 57 1e-08
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 57 1e-08
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 56 1e-08
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 56 2e-08
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 56 2e-08
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 56 2e-08
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 2e-08
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 56 2e-08
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 56 2e-08
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 55 2e-08
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 55 3e-08
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 55 4e-08
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 55 5e-08
Medtr5g019030.1 | PPR containing plant-like protein | HC | chr5:... 55 5e-08
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 54 5e-08
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 54 6e-08
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 54 8e-08
Medtr1g064150.1 | PPR superfamily protein | LC | chr1:28230801-2... 54 9e-08
Medtr3g030450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 9e-08
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 54 1e-07
Medtr6g069480.2 | PPR containing plant-like protein | HC | chr6:... 53 2e-07
Medtr6g069480.4 | PPR containing plant-like protein | HC | chr6:... 53 2e-07
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 53 2e-07
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 53 2e-07
Medtr6g069480.3 | PPR containing plant-like protein | HC | chr6:... 53 2e-07
Medtr6g069480.1 | PPR containing plant-like protein | HC | chr6:... 53 2e-07
Medtr6g069480.5 | PPR containing plant-like protein | HC | chr6:... 53 2e-07
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr4g108900.1 | PPR containing plant-like protein | HC | chr4:... 52 3e-07
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 52 3e-07
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr1g008030.1 | PPR superfamily protein | LC | chr1:676605-677... 51 5e-07
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 6e-07
Medtr3g052970.1 | PPR containing plant-like protein | HC | chr3:... 51 7e-07
Medtr3g053780.1 | PPR containing plant-like protein | HC | chr3:... 51 8e-07
Medtr1g037260.1 | PPR containing plant protein | HC | chr1:13702... 50 8e-07
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 50 9e-07
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 50 9e-07
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 50 9e-07
Medtr8g072150.1 | PPR containing plant-like protein | HC | chr8:... 50 9e-07
Medtr8g059505.1 | PPR repeat protein | HC | chr8:20973752-209036... 50 9e-07
Medtr8g059505.2 | PPR repeat protein | HC | chr8:20973752-209036... 50 9e-07
Medtr8g059505.3 | PPR repeat protein | HC | chr8:20973752-209036... 50 9e-07
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 50 9e-07
Medtr7g069290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 1e-06
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr1g113020.1 | PPR containing plant-like protein | LC | chr1:... 50 2e-06
Medtr7g028623.1 | PPR containing plant-like protein | HC | chr7:... 50 2e-06
Medtr1g042745.1 | PPR repeat protein | HC | chr1:15994857-159945... 49 2e-06
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 49 2e-06
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 49 3e-06
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 49 3e-06
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 49 4e-06
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 48 4e-06
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 48 5e-06
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 48 5e-06
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 48 6e-06
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 8e-06
Medtr1g009650.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 9e-06
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 9e-06
Medtr0060s0100.1 | PPR containing plant-like protein | LC | scaf... 47 9e-06
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 138/176 (78%), Gaps = 8/176 (4%)
Query: 12 NPTFLLAMPF--SSLHSHSRSLPN---DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK- 65
N TFL+ +PF + L+SHSRS+PN DAV F+ +++M TPSIIEFNKIL LVK+
Sbjct: 87 NFTFLI-IPFLRTRLYSHSRSVPNHVHDAVSSFHHMIRMNPTPSIIEFNKILGSLVKSNN 145
Query: 66 -HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
HY+ AISL HQ+EF GI+PDIVTL+ILINCYCHLGQM+ AFS+ ILK G++PNT+T
Sbjct: 146 NHYTTAISLFHQLEFNGIIPDIVTLSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTL 205
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TL+KG+CLN +VK AL FHD ++A G LNQV+YG LINGLCK+G+T AL++LR
Sbjct: 206 NTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLINGLCKMGKTTEALQVLR 261
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 69/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K + A+ + +++ + + D+V + +I+ C ++ A+ + ++
Sbjct: 238 VTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAYELYSQ 297
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + + P +T ++LI G C+ Q+K+A E+L I N ++ IL++ LCK G
Sbjct: 298 MIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDALCKEGN 357
Query: 172 TRAALRLL 179
+ A+ LL
Sbjct: 358 VKGAMNLL 365
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ ++ I+ L K + A L QM + P +VTL+ LI +C +GQ+ AF +
Sbjct: 271 DVVMYSTIIDSLCKEIFVTEAYELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLF 330
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
++L PN TF L+ LC VK A+ ++ + +L
Sbjct: 331 HEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNLLAVMMKEAFRL 375
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 207 bits (528), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 124/164 (75%), Gaps = 2/164 (1%)
Query: 19 MPFSSLHS--HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P+SS + HS + +DAV LFN LL+ TP IEFNKIL LVK+KHY + LS +
Sbjct: 53 IPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKK 112
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEFRGI P++V NILINC+C LG + AFSV AKILK GY PNTITFTTLIKGLCL Q
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD+L+A G Q NQ+SYG LI+GLCKVG+TRAAL LLR
Sbjct: 173 IHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLR 216
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 83/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ +P+++ ++ +++ A+ L ++M I PD+ T NIL
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++S A ++ ++ RG PN +T+++++ LC +V +A+ +L QGI
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N +Y ILI+GLC G+ A +
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFE 391
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV LFN+++ P + FN ++ K+ S A+ L +M RG P+IVT + ++
Sbjct: 280 DAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 339
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C ++ A ++L K+ +G +PN T+T LI GLC + +++ A ++LL +G
Sbjct: 340 DALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYD 399
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ++ G CK G A LL
Sbjct: 400 ITVVTYIVMFYGFCKKGLFDEASALL 425
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L+M + P+ I F ++ L A++ ++ G + ++ LI+
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L ++ + +PN + ++T+I G+C + V A + E++++GI
Sbjct: 201 GLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 260
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI+G VG+ + A+ L
Sbjct: 261 NVVTYSALISGFFTVGKLKDAVDLFN 286
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 80/145 (55%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ ++L+ + + I + ++ L K A+ L +++ + + P++V + +I+
Sbjct: 176 ALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIID 235
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ AF + ++++ +G PN +T++ LI G ++K A+ ++++++ I+
Sbjct: 236 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKP 295
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ ++ IL++ CK G+ AL+L+
Sbjct: 296 DVYTFNILVDVFCKSGKISYALKLV 320
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P+I+ ++ IL L KT A++L +++ +GI P++ T ILI+
Sbjct: 316 ALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID 375
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A ++ +L +GY +T+ + G C A ++ G
Sbjct: 376 GLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIP 435
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y ++ L K G+ A +L R
Sbjct: 436 DAKTYELIKLSLFKKGENDMAEKLHR 461
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 207 bits (526), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 126/164 (76%), Gaps = 8/164 (4%)
Query: 25 HSHSRSLPND------AVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQ 76
+SHS +PN+ AV FN + +M +PSII+FNKIL LVK+ HY AISL HQ
Sbjct: 29 YSHSTFIPNNFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQ 88
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
+EF GI PDIVT NILINCYCHL +M +FS+LAKILK GY+P+TITF TLIKGLC+N +
Sbjct: 89 LEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGK 148
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
VK AL FHD +++ G L+QVSYG LINGLCK+G+TRAAL++LR
Sbjct: 149 VKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLR 192
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P ++ ++ L K K A+SL ++M RGI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT + LI+ C G+ S A+ ++ ++ G+ PN T+ +LI LC N Q+ +A+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIAL 435
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ + +Y ILI+GLCK G+ A
Sbjct: 436 VKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A L++ ++ R +P+++ FN ++ + A L H++ + I PD+ T N
Sbjct: 218 LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFN 277
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+++ C G+M A SV+A ++K P+ +T+ +L+ G CL ++V +A H ++
Sbjct: 278 IMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK--HVLIIIS 335
Query: 151 GIQL--NQVSYGILINGLCKVGQTRAALRLL 179
I++ + SY I+INGLCKV AL L
Sbjct: 336 KIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P+ + ++ ++ L K+ YS A L +M G P+I T N L
Sbjct: 360 DEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSL 419
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C Q+ A +++ KI +G +P+ T+ LI GLC ++ A +LL +G
Sbjct: 420 IDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGY 479
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y I+INGLCKVG A LL
Sbjct: 480 SLDVQTYNIMINGLCKVGLFDEAEVLL 506
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LF+ ++ P + FN ++ L K A S+ M +MPD+VT N L+
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLM 315
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A VL I K P+ +++ +I GLC V AL E+ +GI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A L+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLV 401
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L +M + I P++VT N LI +C +GQ AF +
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+I+ + P+ TF ++ LC ++K A ++ + + + V+Y L++G C V
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 322 NEVNKAKHVL 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E + + ++V + +I+ C ++ A+ + ++
Sbjct: 169 VSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSE 228
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + PN +TF +LI G C+ Q K A + E++ + I + ++ I+++ LCK G+
Sbjct: 229 MITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGK 288
Query: 172 TRAA 175
+ A
Sbjct: 289 MKEA 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI---- 93
L + + H P+I +N ++ L K AI+L +++ +GI PD+ T NILI
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 94 -------------------------------NCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
N C +G A +L+K+ G P+ +
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
T+ T+I+ D+ ++A + E++A+G+
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGL 549
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 207 bits (526), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 126/164 (76%), Gaps = 8/164 (4%)
Query: 25 HSHSRSLPND------AVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQ 76
+SHS +PN+ AV FN + +M +PSII+FNKIL LVK+ HY AISL HQ
Sbjct: 29 YSHSTFIPNNFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQ 88
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
+EF GI PDIVT NILINCYCHL +M +FS+LAKILK GY+P+TITF TLIKGLC+N +
Sbjct: 89 LEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGK 148
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
VK AL FHD +++ G L+QVSYG LINGLCK+G+TRAAL++LR
Sbjct: 149 VKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLR 192
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P ++ ++ L K K A+SL ++M RGI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT + LI+ C G+ S A+ ++ ++ G+ PN T+ +LI LC N Q+ +A+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIAL 435
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ + +Y ILI+GLCK G+ A
Sbjct: 436 VKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A L++ ++ R +P+++ FN ++ + A L H++ + I PD+ T N
Sbjct: 218 LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFN 277
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+++ C G+M A SV+A ++K P+ +T+ +L+ G CL ++V +A H ++
Sbjct: 278 IMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK--HVLIIIS 335
Query: 151 GIQL--NQVSYGILINGLCKVGQTRAALRLL 179
I++ + SY I+INGLCKV AL L
Sbjct: 336 KIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P+ + ++ ++ L K+ YS A L +M G P+I T N L
Sbjct: 360 DEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSL 419
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C Q+ A +++ KI +G +P+ T+ LI GLC ++ A +LL +G
Sbjct: 420 IDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGY 479
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y I+INGLCKVG A LL
Sbjct: 480 SLDVQTYNIMINGLCKVGLFDEAEVLL 506
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LF+ ++ P + FN ++ L K A S+ M +MPD+VT N L+
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLM 315
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A VL I K P+ +++ +I GLC V AL E+ +GI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A L+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLV 401
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L +M + I P++VT N LI +C +GQ AF +
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+I+ + P+ TF ++ LC ++K A ++ + + + V+Y L++G C V
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 322 NEVNKAKHVL 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E + + ++V + +I+ C ++ A+ + ++
Sbjct: 169 VSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSE 228
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + PN +TF +LI G C+ Q K A + E++ + I + ++ I+++ LCK G+
Sbjct: 229 MITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGK 288
Query: 172 TRAA 175
+ A
Sbjct: 289 MKEA 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI---- 93
L + + H P+I +N ++ L K AI+L +++ +GI PD+ T NILI
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 94 -------------------------------NCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
N C +G A +L+K+ G P+ +
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
T+ T+I+ D+ ++A + E++A+G+
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGL 549
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 207 bits (526), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 126/164 (76%), Gaps = 8/164 (4%)
Query: 25 HSHSRSLPND------AVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQ 76
+SHS +PN+ AV FN + +M +PSII+FNKIL LVK+ HY AISL HQ
Sbjct: 29 YSHSTFIPNNFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQ 88
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
+EF GI PDIVT NILINCYCHL +M +FS+LAKILK GY+P+TITF TLIKGLC+N +
Sbjct: 89 LEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGK 148
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
VK AL FHD +++ G L+QVSYG LINGLCK+G+TRAAL++LR
Sbjct: 149 VKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLR 192
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P ++ ++ L K K A+SL ++M RGI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT + LI+ C G+ S A+ ++ ++ G+ PN T+ +LI LC N Q+ +A+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIAL 435
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ + +Y ILI+GLCK G+ A
Sbjct: 436 VKKIKDQGIQPDMCTYNILIDGLCKGGRLHNA 467
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A L++ ++ R +P+++ FN ++ + A L H++ + I PD+ T N
Sbjct: 218 LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFN 277
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+++ C G+M A SV+A ++K P+ +T+ +L+ G CL ++V +A H ++
Sbjct: 278 IMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAK--HVLIIIS 335
Query: 151 GIQL--NQVSYGILINGLCKVGQTRAALRLL 179
I++ + SY I+INGLCKV AL L
Sbjct: 336 KIRVAPDAHSYSIMINGLCKVKMVDEALSLF 366
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P+ + ++ ++ L K+ YS A L +M G P+I T N L
Sbjct: 360 DEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSL 419
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C Q+ A +++ KI +G +P+ T+ LI GLC ++ A +LL +G
Sbjct: 420 IDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDVFQDLLIKGY 479
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y I+INGLCKVG A LL
Sbjct: 480 SLDVQTYNIMINGLCKVGLFDEAEVLL 506
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LF+ ++ P + FN ++ L K A S+ M +MPD+VT N L+
Sbjct: 256 DAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLM 315
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A VL I K P+ +++ +I GLC V AL E+ +GI
Sbjct: 316 DGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIA 375
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A L+
Sbjct: 376 PNTVTYSSLIDGLCKSGRYSYAWDLV 401
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L +M + I P++VT N LI +C +GQ AF +
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+I+ + P+ TF ++ LC ++K A ++ + + + V+Y L++G C V
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 322 NEVNKAKHVL 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E + + ++V + +I+ C ++ A+ + ++
Sbjct: 169 VSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSE 228
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + PN +TF +LI G C+ Q K A + E++ + I + ++ I+++ LCK G+
Sbjct: 229 MITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGK 288
Query: 172 TRAA 175
+ A
Sbjct: 289 MKEA 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI---- 93
L + + H P+I +N ++ L K AI+L +++ +GI PD+ T NILI
Sbjct: 400 LVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLC 459
Query: 94 -------------------------------NCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
N C +G A +L+K+ G P+ +
Sbjct: 460 KGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAV 519
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
T+ T+I+ D+ ++A + E++A+G+
Sbjct: 520 TYETIIRAFFHKDENEKAEKLLREMIARGL 549
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 133/185 (71%), Gaps = 7/185 (3%)
Query: 1 MSVLRYRWFHRNPTFLLAMPFSSLHSHSRSLPNDA---VCLFNRLLQMRHTPSIIEFNKI 57
M+ L + FH + +FL +SHSR +PN+ V FN +L M TPSIIEFNKI
Sbjct: 1 MASLCFFRFHYSSSFLFTRTL--YYSHSRFVPNNVDNVVSSFNHILHMNPTPSIIEFNKI 58
Query: 58 LTPLVKT--KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR 115
L LVK+ KHY AISL +Q+E GI P IVT NI+INCYCHL +M+ AFS+L KILK
Sbjct: 59 LGSLVKSNNKHYPTAISLFYQLELNGITPSIVTFNIVINCYCHLSEMNFAFSLLGKILKV 118
Query: 116 GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
G+ P+ +T TTLIKG+CLN +VK AL FHD +++ G L+QVSYG LINGLCK+G+TRAA
Sbjct: 119 GFHPDIVTLTTLIKGMCLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAA 178
Query: 176 LRLLR 180
L++LR
Sbjct: 179 LQMLR 183
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN ++Q P++ ++ ++ L K K A+ +M+ + I+P+ VT + L
Sbjct: 316 NKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSL 375
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ +L ++ RG N ITF++L+ LC N V +A++ +L + I
Sbjct: 376 IDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDI 435
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y ILI+GLCK G+ + A
Sbjct: 436 QPNMYTYNILIDGLCKQGRLKDA 458
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
L +A L++ ++ +P+++ F+ ++ + A L ++M + I P++ T
Sbjct: 207 EKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYT 266
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
NIL++ C G+M A +VLA ++K+G KP+ +T T+L+ G CL ++V +A + ++
Sbjct: 267 FNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMV 326
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G+ N Y ++INGLCK A+ +
Sbjct: 327 QRGVMPNVHCYSVVINGLCKNKLIDEAMDFFK 358
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LFN ++ P++ FN ++ L K A ++ M +G+ PDIVT L+
Sbjct: 247 DAFRLFNEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLM 306
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A ++ +++RG PN ++ +I GLC N + A+ F E+ ++ I
Sbjct: 307 DGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKII 366
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A LL
Sbjct: 367 PNTVTYSSLIDGLCKSGRISHAWELL 392
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 11 RNPTFLLAMPFSSLHSHSRSLPN--------DAVCLFNRL---------LQMRHTPS-II 52
+N AM F + +PN D +C R+ + R P+ +I
Sbjct: 346 KNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVI 405
Query: 53 EFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKI 112
F+ +L L K +H AI L +++ R I P++ T NILI+ C G++ A + +
Sbjct: 406 TFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDL 465
Query: 113 LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
+GY T+ +I GLCL + AL ++ G N V++ I+++ L K +
Sbjct: 466 FIKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDEN 525
Query: 173 RAALRLLR 180
A +LLR
Sbjct: 526 EKAEKLLR 533
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 69/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E + + D+V N +I+ C ++ A+ + ++
Sbjct: 160 VSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSE 219
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P +TF++LI G C+ Q K A + +E++ + I N ++ IL++ LCK G+
Sbjct: 220 MITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVDALCKEGK 279
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 280 MKEAKNVL 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N I+ L K K + A L +M + I P +VT + LI +C +GQ AF +
Sbjct: 193 DVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLF 252
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + PN TF L+ LC ++K A ++ QG++ + V++ L++G C V
Sbjct: 253 NEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLV 312
Query: 170 GQTRAALRLLR 180
+ A L
Sbjct: 313 NEVNKAKALFN 323
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 116/148 (78%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D V F+R+L + PS+IEF KIL+ LVK KHY ISL +Q+EF GI P+IV+L+IL
Sbjct: 27 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 86
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCYCHLGQM AFS+ AKILK GY PNTIT TTL+KG CLN +VK AL FHD +LA G
Sbjct: 87 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 146
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
NQVSYG LINGLCK+G+TRAAL++LR
Sbjct: 147 HFNQVSYGTLINGLCKIGETRAALQMLR 174
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R +P+++ N ++ + A L +M + I PD+ T N
Sbjct: 200 LVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFN 259
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ C G++ A S +A ++K G P+ +T+++L+ G CL ++V +A +
Sbjct: 260 ILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVLSIISRM 319
Query: 151 GIQLNQVSYGILINGL 166
+ N SY I+ING
Sbjct: 320 RVAPNARSYSIVINGF 335
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L +M + I P +VTLN LI YC +GQ AF +L
Sbjct: 184 NVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLL 243
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ LC ++K A ++ +G+ + V+Y L++G C V
Sbjct: 244 REMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLV 303
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 304 NEVNKAKHVL 313
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L+M + P+ I ++ A+ + G + V+ LIN
Sbjct: 99 AFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLIN 158
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L +I + + N + ++T+I GLC + V A + + E++ + I
Sbjct: 159 GLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISP 218
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
V+ LI G C VGQ + A LLR
Sbjct: 219 TVVTLNSLIYGYCIVGQFKEAFGLLR 244
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 63/124 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + Q+E + + ++V + +I+ C ++ A+ + ++
Sbjct: 151 VSYGTLINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSE 210
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P +T +LI G C+ Q K A E++ + I + ++ IL++ LCK G+
Sbjct: 211 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 270
Query: 172 TRAA 175
+ A
Sbjct: 271 IKEA 274
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 129/176 (73%), Gaps = 7/176 (3%)
Query: 12 NPTFLLAMPFSSLHSHSRSLP-------NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT 64
NP F ++ + +SHSR +D V F+R+L + TPSI+EF+KIL LVK
Sbjct: 15 NPIFPFSLLRTLYYSHSRFNSNSNSNHVDDFVSSFHRMLGLNPTPSIVEFSKILGSLVKL 74
Query: 65 KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
KHY ISLS+Q+EF GI P+IV+L+ILINCYCHLGQM AFS+LAKI K GY PNTITF
Sbjct: 75 KHYPTVISLSYQLEFNGIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITF 134
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TL+KGLCLN +V A+ FHD +LA G L+QV+YG LINGLCK+G+T+ AL++LR
Sbjct: 135 NTLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLR 190
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H PS ++ ++ K K A+SL ++M RGI
Sbjct: 314 DGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIA 373
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT + LI+ C G+ S A+ ++ ++ G PN T+++LI LC N+ + +A+
Sbjct: 374 PNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTL 433
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ + +Y ILI+GLCK G+ + A
Sbjct: 434 VKKIKDQGIQPDMYTYNILIDGLCKGGRLKNA 465
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +DA L++ ++ + +P+++ F+ ++ A L HQM + I PD+ T N
Sbjct: 216 LVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFN 275
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ C G + A S L ++K G P+ +T+ +++ G CL ++V +A +
Sbjct: 276 ILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRI 335
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G+ + SY I+ING CK+ AL L
Sbjct: 336 GVAPSAYSYSIMINGFCKIKMIDEALSLF 364
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P+ + ++ ++ L K+ +S A L +M G P+I T + L
Sbjct: 358 DEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSL 417
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G +P+ T+ LI GLC ++K A +LL +G
Sbjct: 418 IDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGY 477
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN SY ILINGLCK G A LL
Sbjct: 478 SLNIRSYNILINGLCKDGLFDKAEALL 504
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L ++++ P + FN ++ L K A S M G++PD+VT N ++
Sbjct: 254 EAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIM 313
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C + +++ A +L+ I + G P+ +++ +I G C + AL E+ +GI
Sbjct: 314 DGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIA 373
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A L+
Sbjct: 374 PNTVTYSSLIDGLCKSGRFSCAWELV 399
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ +N ++ L K K S A L +M + I P +VT + LI +C +GQ+ AF ++
Sbjct: 200 NVVMYNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLV 259
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ LC VK A F ++ +G+ + V+Y +++G C V
Sbjct: 260 HQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLV 319
Query: 170 GQTRAALRLL 179
+ A LL
Sbjct: 320 NEVNKAKHLL 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I ++ ++ L K H A++L +++ +GI PD+ T NILI+ C G++ A V
Sbjct: 409 PNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDV 468
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY N ++ LI GLC + +A ++ + + V+Y +I+ L
Sbjct: 469 FQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHSLFY 528
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 529 KDENEKAEKLLR 540
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + ++ +M + P+ I FN ++ L + AI + G D VT LIN
Sbjct: 115 AFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTYGTLIN 174
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A VL +I + N + + T+I LC + V A + + E++ + I
Sbjct: 175 GLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITKKISP 234
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
V++ LI G C VGQ + A L+
Sbjct: 235 TVVTFSALIYGFCIVGQLKEAFGLV 259
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N I+ + A L + G+ P + +I+IN +C + + A S+
Sbjct: 304 PDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSL 363
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ RG PNT+T+++LI GLC + + A + DE+ G N +Y LI+ LCK
Sbjct: 364 FYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLIDALCK 423
Query: 169 VGQTRAALRLLR 180
A+ L++
Sbjct: 424 NNHLDKAMTLVK 435
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ + +L + + + ++ L K A+ + ++E + + ++V N +
Sbjct: 148 NEAIHFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTV 207
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C +S A+ + ++++ + P +TF+ LI G C+ Q+K A +++ + I
Sbjct: 208 IDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNI 267
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ IL++ LCK G + A L
Sbjct: 268 NPDVYTFNILVDALCKEGDVKGAKSFL 294
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 122/164 (74%), Gaps = 2/164 (1%)
Query: 19 MPFSSLHS--HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P+SS+ + H+ + DA LF+RLL+ TP IEFNKIL LVK+KHY +SLS Q
Sbjct: 50 IPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQ 109
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEF GI PD T NILINC+C LG + AFSV AKIL+ GY PNTITFTTLIKGLCL Q
Sbjct: 110 MEFEGINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQ 169
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD ++A G QL+QV YG LI+GLCKVG+TRAAL LLR
Sbjct: 170 IHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 213
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ +P+++ ++ +++ AI L ++M I PD+ T NIL
Sbjct: 241 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNIL 300
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G+M +V A ++K+G KPN +T+ +L+ G CL +V +A + +G+
Sbjct: 301 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV 360
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ILI+G CK+ + A+ L +
Sbjct: 361 NPDIQSYNILIDGFCKIKKVDEAMNLFK 388
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + + Q P I +N ++ K K A++L +M + I+PD+VT N L
Sbjct: 346 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 405
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S A ++ ++ RG P+ IT+++++ LC N QV +A+ +L QGI
Sbjct: 406 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 465
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N +Y ILI+GLCK G+ A
Sbjct: 466 RPNMYTYTILIDGLCKGGRLEDA 488
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P ++ +N ++ L K S A+ L +M RG+ PDI+T + +
Sbjct: 381 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 440
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K+ +G +PN T+T LI GLC +++ A ++LL +G
Sbjct: 441 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 500
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ++I+G C G AL LL
Sbjct: 501 NITVNTYTVMIHGFCNKGLFDEALTLL 527
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 79/142 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P+++ + ++ K + A S+ + M RG+ PDI + NILI+ +C
Sbjct: 316 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 375
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A ++ ++ + P+ +T+ +LI GLC ++ AL+ DE+ +G+ + +
Sbjct: 376 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 435
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK Q A+ LL
Sbjct: 436 TYSSILDALCKNHQVDKAIALL 457
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L+M + P+ I F ++ L A+ + G D V LI+
Sbjct: 138 AFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIH 197
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L ++ +PN + ++T+I G+C + V A + E++++GI
Sbjct: 198 GLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 257
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI+G VGQ + A+ L
Sbjct: 258 NVVTYSALISGFFTVGQLKDAIDLFN 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 73/141 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++ M + + ++ L K A+ L +++ + P++V + +I+
Sbjct: 173 ALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIID 232
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ AF + ++++ +G PN +T++ LI G Q+K A+ ++++ + I+
Sbjct: 233 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKP 292
Query: 155 NQVSYGILINGLCKVGQTRAA 175
+ ++ IL++G CK G+ +
Sbjct: 293 DVYTFNILVDGFCKDGKMKEG 313
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P II ++ IL L K AI+L +++ +GI P++ T ILI+ C G++ A ++
Sbjct: 432 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 491
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY T+T +I G C AL ++ + V+Y I+I L
Sbjct: 492 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIIIRSLFD 551
Query: 169 VGQTRAALRL 178
+ A +L
Sbjct: 552 KDENDKAEKL 561
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 116/148 (78%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D V F+R+L + PS+IEF KIL+ LVK KHY ISL +Q+EF GI P+IV+L+IL
Sbjct: 44 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 103
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCYCHLGQM AFS+ AKILK GY PNTIT TTL+KG CLN +VK AL FHD +LA G
Sbjct: 104 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 163
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
NQVSYG LINGLCK+G+TRAAL++LR
Sbjct: 164 HFNQVSYGTLINGLCKIGETRAALQMLR 191
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D CL+ + +MR P+ ++ ++ K K A+SL ++M R I PD VT N LI
Sbjct: 315 DGYCLY-IISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 373
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++S A+ ++ ++ G + IT+ +LI LC N V +A+ ++ QGIQ
Sbjct: 374 DGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQ 433
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
L+ +Y ILI+GLCK G+ + A
Sbjct: 434 LDMYTYNILIDGLCKQGRLKDA 455
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R +P+++ N ++ + A L +M + I PD+ T N
Sbjct: 217 LVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFN 276
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN---------------- 134
IL++ C G++ A S +A ++K G P+ +T+++L+ G CL
Sbjct: 277 ILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYIISRMRVAPNARSYSI 336
Query: 135 --------DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
V +AL E+ + I + V+Y LI+GLCK G+ A L+
Sbjct: 337 VINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELV 389
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LF + R P + +N ++ L K+ S A L +M G DI+T N L
Sbjct: 348 DKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSL 407
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G + + T+ LI GLC ++K A +LL +G
Sbjct: 408 IDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGY 467
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L +Y I+INGLC G A LL
Sbjct: 468 NLTVWTYTIMINGLCLEGLLNEAETLL 494
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+ ++ ++ I+ L K K + A L +M + I P +VTLN LI YC +GQ AF
Sbjct: 199 STDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFG 258
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L +++ + P+ TF L+ LC ++K A ++ +G+ + V+Y L++G C
Sbjct: 259 LLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC 318
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 44 QMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+MR + II +N ++ L K H AI+L +++ +GI D+ T NILI+ C G
Sbjct: 391 EMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQG 450
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A + +L +GY T+T +I GLCL + A ++ G + V+
Sbjct: 451 RLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCE 510
Query: 161 ILINGLCKVGQTRAALRLLR 180
+I L + + A +LLR
Sbjct: 511 TIIRALFENDKNERAEKLLR 530
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN--- 90
+A L ++ P + FN ++ L K A S M G+MPD+VT +
Sbjct: 255 EAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 314
Query: 91 ---------------------ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
I+IN +C + + A S+ ++ R P+T+T+ +LI
Sbjct: 315 DGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLID 374
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GLC + ++ A + DE+ G + ++Y LI+ LCK A+ L++
Sbjct: 375 GLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVK 425
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L+M + P+ I ++ A+ + G + V+ LIN
Sbjct: 116 AFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLIN 175
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L +I + + + ++T+I GLC + V A + + E++ + I
Sbjct: 176 GLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISP 235
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
V+ LI G C VGQ + A LLR
Sbjct: 236 TVVTLNSLIYGYCIVGQFKEAFGLLR 261
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 63/124 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + Q+E + + D+V + +I+ C ++ A+ + ++
Sbjct: 168 VSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSE 227
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P +T +LI G C+ Q K A E++ + I + ++ IL++ LCK G+
Sbjct: 228 MITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 287
Query: 172 TRAA 175
+ A
Sbjct: 288 IKEA 291
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 128/175 (73%), Gaps = 7/175 (4%)
Query: 13 PTFLLAMPFSSLHSHSRSLP-----NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-- 65
P+FL + L+S + +P ++ V FN LL+ + T SIIEFNKIL LVK+
Sbjct: 23 PSFLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNN 82
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
HY AISLS ++EF GI PDI T NILINCYCH+ +M+ AFS++AKILK GY+P+TITF
Sbjct: 83 HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TLIKGLCLN +VK AL FHD +LA G L+Q SYG LINGLCK+G+TR AL++LR
Sbjct: 143 TLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLR 197
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + N + QM P+ + ++ K K A+SL + M+F+GI PD VT N L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ ++ ++ G N T+ LI LC N V +A+ ++ QGI
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q + ++ ILI GLCKVG+ + A
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNA 472
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L+++++ + +P ++ F+ ++ A L +M + I PD T NIL+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G + A ++L ++K G PN +T+++L+ G CL +QV +A + + G
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N SY +ING CK+ AL L
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFN 372
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LFN + P + +N ++ L K+ S A L +M G +I T N L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G +P+ TF LI GLC ++K A +LL++G
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+N +Y I++NGLCK G A LL
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALL 511
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF ++ P FN ++ L K + A ++ M G+MP++VT + L+
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + Q++ A VL I + G PN ++ T+I G C V AL +++ +GI
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++V+Y LI+GLCK G+ A L+
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELV 406
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I +N ++ L K H AI+L +++ +GI PD+ T NILI C +G++ A V
Sbjct: 417 NIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVF 476
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N T+ ++ GLC A ++ GI + V+Y LI L
Sbjct: 477 QDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHK 536
Query: 170 GQTRAALRLLR 180
+ A +LLR
Sbjct: 537 DENEKAEKLLR 547
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ +N I+ L K K A L QM + I PD+VT + LI +C +GQ+ AF +
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ LC +K A ++ +G+ N V+Y L++G C V
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 170 GQTRAALRLLR 180
Q A +L
Sbjct: 327 NQVNKAKHVLN 337
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 65/126 (51%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A+ + +++ + + ++V N +I+ C + A+ + ++++
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ P+ +TF+ LI G C+ Q++ A E++ + I + ++ IL++ LCK G +
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 174 AALRLL 179
A +L
Sbjct: 296 GAKNML 301
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 128/175 (73%), Gaps = 7/175 (4%)
Query: 13 PTFLLAMPFSSLHSHSRSLP-----NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-- 65
P+FL + L+S + +P ++ V FN LL+ + T SIIEFNKIL LVK+
Sbjct: 23 PSFLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNN 82
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
HY AISLS ++EF GI PDI T NILINCYCH+ +M+ AFS++AKILK GY+P+TITF
Sbjct: 83 HYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TLIKGLCLN +VK AL FHD +LA G L+Q SYG LINGLCK+G+TR AL++LR
Sbjct: 143 TLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLR 197
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + N + QM P+ + ++ K K A+SL + M+F+GI PD VT N L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ ++ ++ G N T+ LI LC N V +A+ ++ QGI
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q + ++ ILI GLCKVG+ + A
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNA 472
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L+++++ + +P ++ F+ ++ A L +M + I PD T NIL+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G + A ++L ++K G PN +T+++L+ G CL +QV +A + + G
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N SY +ING CK+ AL L
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFN 372
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LFN + P + +N ++ L K+ S A L +M G +I T N L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G +P+ TF LI GLC ++K A +LL++G
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+N +Y I++NGLCK G A LL
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALL 511
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF ++ P FN ++ L K + A ++ M G+MP++VT + L+
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + Q++ A VL I + G PN ++ T+I G C V AL +++ +GI
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++V+Y LI+GLCK G+ A L+
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELV 406
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I +N ++ L K H AI+L +++ +GI PD+ T NILI C +G++ A V
Sbjct: 417 NIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVF 476
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N T+ ++ GLC A ++ GI + V+Y LI L
Sbjct: 477 QDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHK 536
Query: 170 GQTRAALRLLR 180
+ A +LLR
Sbjct: 537 DENEKAEKLLR 547
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ +N I+ L K K A L QM + I PD+VT + LI +C +GQ+ AF +
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ LC +K A ++ +G+ N V+Y L++G C V
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 170 GQTRAALRLLR 180
Q A +L
Sbjct: 327 NQVNKAKHVLN 337
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 65/126 (51%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A+ + +++ + + ++V N +I+ C + A+ + ++++
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ P+ +TF+ LI G C+ Q++ A E++ + I + ++ IL++ LCK G +
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 174 AALRLL 179
A +L
Sbjct: 296 GAKNML 301
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
NDAV FNR+L M++ TP I EFNKIL+ L K H++IAIS S QME + I PDI TL+I
Sbjct: 36 NDAVSSFNRILHMKNPTPPIFEFNKILSSLAKLNHFNIAISFSQQMELKPIQPDIFTLSI 95
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LINC+CHL Q++ AFS+L KILK GY+PNT+T TTLIKGLCLN +V++AL FH++++A+G
Sbjct: 96 LINCFCHLNQLNYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKG 155
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
LN+VSYG LINGLCK G+T+AAL LLR
Sbjct: 156 FYLNEVSYGTLINGLCKSGETKAALSLLR 184
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 21 FSSLHSHSRSLP--NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME 78
+SSL S+ N A +FN + + + ++ ++ K K A++L +M
Sbjct: 303 YSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMH 362
Query: 79 FRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
+ ++P+ VT N LI+ C LG+MS A+ + ++ RG N IT+++L+ GLC N QV
Sbjct: 363 SKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVD 422
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+A+ ++ QGIQL+ +Y IL++GLCK G+ R A
Sbjct: 423 KAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDA 459
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 80/150 (53%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +D L++ ++ + P I +N ++ A+ L ++M + + P++ T +
Sbjct: 210 LVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFS 269
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI+ C G++ A +VLA ++K+G +PN T+++L+ G +V +A + + +
Sbjct: 270 ILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARR 329
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ L+ SY ++ING CK A+ L +
Sbjct: 330 GVALDVQSYSVMINGFCKNKMVDEAVNLFK 359
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N I+ L K K S L +M + I PD +T N LI + LGQM A +
Sbjct: 193 PDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGL 252
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + PN TF+ LI LC + +VK+A ++ QG++ N +Y L++G
Sbjct: 253 LNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFS 312
Query: 169 VGQTRAA 175
V + A
Sbjct: 313 VKEVNKA 319
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I ++ ++ K + A + + + RG+ D+ + +++IN +C + A ++
Sbjct: 298 PNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNL 357
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + PNT+T+ +LI GLC ++ A F DE+ +G N ++Y L++GLCK
Sbjct: 358 FKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCK 417
Query: 169 VGQTRAALRLL 179
Q A+ LL
Sbjct: 418 NHQVDKAITLL 428
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K+ A+SL ++E + PD+V N +I+ C +S + + ++
Sbjct: 161 VSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSE 220
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ IT+ TLI G + Q+K A+ + + + + N ++ ILI+ LCK G+
Sbjct: 221 MIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGE 280
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 281 VKKARNVL 288
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P+ + ++ L A+ + + +G + V+ L
Sbjct: 107 NYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTL 166
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A S+L KI KP+ + + T+I LC + V + E++ + I
Sbjct: 167 INGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKI 226
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LI G +GQ + A+ LL
Sbjct: 227 YPDAITYNTLIYGFSILGQMKEAVGLL 253
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 21 FSSLHSHSRSLPN--------DAVCLFNRL---------LQMRHTPS-IIEFNKILTPLV 62
F +HS + +PN D +C R+ + R P+ II ++ +L L
Sbjct: 358 FKEMHSKNM-VPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLC 416
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K AI+L +++ +GI DI T IL++ C G++ A V +L Y +
Sbjct: 417 KNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDAR 476
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+T +I GLC AL ++ G + V+Y I+I L + + A++L+R
Sbjct: 477 IYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLIR 534
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 13 PTFLLAMPFSSLHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSI 69
P+ L P S HS S L +DAV FNR+L+MR TP IIEFN+ILT LVK ++S
Sbjct: 16 PSLLPYFPLSHFHSQSTPLNVDDAVSSFNRMLRMRPTPPIIEFNQILTSLVKIDKNNFST 75
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
ISL QMEF+ I P IVTL+ILINCY HL QM AFS+ KILK G P+ I F TLIK
Sbjct: 76 VISLFRQMEFQRIHPSIVTLSILINCYSHLRQMKFAFSLFGKILKMGCHPDVIIFNTLIK 135
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GLCLN+ VK AL FHD+L+AQG QL++VSYG LINGLCKVGQT+AAL+LLR
Sbjct: 136 GLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLLR 186
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN ++Q TP I + ++ L K K A+SL +M + D++T + L
Sbjct: 320 NKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSL 379
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++ A+ + ++L RG P+ IT+ +L+ LC + Q +A+ ++ QGI
Sbjct: 380 INGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGI 439
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y ILI+GLCK G+ A ++ R
Sbjct: 440 QADIFTYNILIDGLCKDGRLDDAQKIFR 467
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ +L P +I +N +L L K+ AI+L +M+ +GI DI T NILI+ C
Sbjct: 395 LFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLC 454
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A + +L + Y + +T+ +I GLC + AL ++ A+G + +
Sbjct: 455 KDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAI 514
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y I+I L G A +LLR
Sbjct: 515 TYEIIIRALFGKGVNDKAEKLLR 537
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF + T +I ++ ++ L K+ A L +M RG PD++T N L
Sbjct: 355 DEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSL 414
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q A ++L+K+ +G + + T+ LI GLC + ++ A + +LL +
Sbjct: 415 LDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSY 474
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
++ V+Y ++INGLCK AL LL
Sbjct: 475 NVDVVTYNVMINGLCKESLLDEALTLL 501
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N ++ P + FN ++ L K A L M G+ P+IVT ++L++ YC
Sbjct: 255 LLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYC 314
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ +++ A + +++RG P+ ++T +I GLC + A+ +E+ + + L+ +
Sbjct: 315 LVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVI 374
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LINGLCK G+ +A +L
Sbjct: 375 TYSSLINGLCKSGRLISAWKLF 396
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
Q+ P ++ ++ I+ L K KH + A L +M + I PD+ T LI+ +C +GQ+
Sbjct: 191 QLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLK 250
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
F +L +++ + P+ TF TL+ L +VK A ++ +G++ N V+Y +L+
Sbjct: 251 EVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLM 310
Query: 164 NGLCKVGQTRAA 175
+G C V + A
Sbjct: 311 DGYCLVNEVNKA 322
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A CL +++ P+I+ ++ ++ + A + + M RG+ PDI + I+I
Sbjct: 286 EAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMI 345
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C + + A S+ ++ + IT+++LI GLC + ++ A + DE+L +G
Sbjct: 346 NGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQP 405
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y L++ LCK QT A+ LL
Sbjct: 406 PDVITYNSLLDALCKSHQTDKAIALL 431
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME----FRGIMPDIVTL 89
+A+ ++L+ S + + ++ L K A+ L ++E FR PD+V
Sbjct: 145 EALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQLLRRIERQLLFR---PDVVMY 201
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+I+I+ C ++ AF + ++++++ P+ T+T+LI G C+ Q+K +E++
Sbjct: 202 SIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVL 261
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAA 175
+ I + ++ L++ L K G+ + A
Sbjct: 262 KNINPDVYTFNTLVDALFKEGKVKEA 287
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/168 (61%), Positives = 128/168 (76%), Gaps = 8/168 (4%)
Query: 21 FSSLH-SHSRSLPN-----DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH--YSIAIS 72
F +LH SHS+ N DA+ F R+L+M +PSIIEFNKIL LVK+ + Y IAIS
Sbjct: 10 FRTLHYSHSKFNSNHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAIS 69
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
L H+++ I P IVT N +INCYCHLG+M AFSVLAKILK GY P+TIT TTLIKGLC
Sbjct: 70 LYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLC 129
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
LN +V AL FHD ++A+G +LN+VSYGILINGLCK+G+TRAAL++LR
Sbjct: 130 LNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLR 177
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + + R TP + + I+ L K K A+SL ++M +GI PD VT + L
Sbjct: 292 NKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSL 351
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++S A+ +L ++ RG + IT+T+ + LC N QV +A+ ++ QGI
Sbjct: 352 IDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI 411
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y ILI+GLCK G+ A
Sbjct: 412 QPNINTYNILIDGLCKEGRFENA 434
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++A+ LFN + TP + ++ ++ L K++ S A L QM RG D++T
Sbjct: 325 MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYT 384
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
++ C Q+ A +++ KI +G +PN T+ LI GLC + + A +LL +
Sbjct: 385 SFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIK 444
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G ++ +Y I+INGLC G A+ LL
Sbjct: 445 GYKVTVWTYNIMINGLCLEGLFDEAMTLLE 474
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
L +A L+++++ + +P ++ F+ ++ + A L H+M I PD+ T
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260
Query: 89 LNILINCYCHLGQMSVAFSVLAKIL-----------------KRGYKPNTITFTTLIKGL 131
NIL++ C G +VLA ++ KR P+ ++T +IK L
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
C V AL +E+ +GI ++V+Y LI+GLCK + A LL
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELL 368
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 43 LQMRHTPS-IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+ R P+ +I + L L K A++L +++ +GI P+I T NILI+ C G+
Sbjct: 371 MHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR 430
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
A + +L +GYK T+ +I GLCL A+ +++ G + V+Y
Sbjct: 431 FENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYET 490
Query: 162 LINGLCKVGQTRAALRLLR 180
+I L K + A +LLR
Sbjct: 491 IIRALFKNDENHKAEKLLR 509
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L QM + + PD+VT + LI +C +GQ AF +
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV------------ 157
+++ P+ TF L+ LC K ++ + Q+N+
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV 306
Query: 158 -----SYGILINGLCKVGQTRAALRLL 179
SY I+I LCK+ AL L
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLF 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 65/128 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + +++ + + ++V + +I+ C ++ A+ + ++
Sbjct: 154 VSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ 213
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +TF+ LI G C+ Q K A E++ I + ++ IL++ LCK G
Sbjct: 214 MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGS 273
Query: 172 TRAALRLL 179
T+ +L
Sbjct: 274 TKETKNVL 281
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV L ++ P+I +N ++ L K + A + + +G + T NI+
Sbjct: 397 DKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIM 456
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G A ++L K+ G P+ +T+ T+I+ L ND+ +A + E++A+G+
Sbjct: 457 INGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Query: 153 QLNQVS 158
+V
Sbjct: 517 LEEKVE 522
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 123/160 (76%), Gaps = 6/160 (3%)
Query: 27 HSRSLP------NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
H + LP +D V FNR+L + T I EFNKIL+ L K H++IAIS S QME +
Sbjct: 24 HIQPLPSFIHNVDDVVSSFNRILNINPTQPIFEFNKILSSLAKLNHFNIAISFSQQMELK 83
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI PDI TL+ILINC+C LGQ++ AFS+L KILK GY+PNT+T TTLIKGLCLN +V++A
Sbjct: 84 GIQPDIFTLSILINCFCQLGQINFAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKA 143
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L FH++++A+G LN+VSYG LINGLCK G+TRAAL+LLR
Sbjct: 144 LYFHNDVIAKGFYLNEVSYGTLINGLCKSGETRAALQLLR 183
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ + P+++ FN ++ + A+ L ++M + P++ T NIL+
Sbjct: 213 DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILV 272
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ A SVL ++K+ +P+ +T+ +L+ G L +V +A D L +G+
Sbjct: 273 DGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVT 332
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N SY ++INGLCKV A+ L +
Sbjct: 333 PNVRSYSVMINGLCKVKMVDEAVILFK 359
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR--GIMPDIVTLN 90
++AV LF + TP+ I +N ++ L K+ S L +M+ + G+ PD+ T +
Sbjct: 352 DEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYS 411
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI+ C G+++ A+ ++ ++ RG N +T+T+LI GLC N + +A+ ++
Sbjct: 412 ILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDL 471
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
G++ N +Y ILI+ LCK G+ A
Sbjct: 472 GVEPNVYTYNILIDRLCKSGRIADA 496
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LFN ++ P++ FN ++ L K A S+ M + + PD+VT N L+
Sbjct: 248 EAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLM 307
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + +++ A V + +RG PN +++ +I GLC V A+ E+ ++ +
Sbjct: 308 DGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLT 367
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y LI+GLCK G+ L+
Sbjct: 368 PNTITYNSLIDGLCKSGRISDVWYLI 393
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ P ++ +N ++ K + A + + RG+ P++ + +++IN C +
Sbjct: 291 MIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKM 350
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ--GIQLNQVSY 159
+ A + ++ + PNTIT+ +LI GLC + ++ DE+ + G++ + +Y
Sbjct: 351 VDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTY 410
Query: 160 GILINGLCKVGQTRAALRLL 179
ILI+ LCK G+ A L+
Sbjct: 411 SILIDRLCKSGRIADAWYLI 430
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIM---PDIVTLNILINCYCHLGQMSVAFSV 108
+ + ++ L K+ A+ L ++E G++ PD++ +I+ +C + A+ +
Sbjct: 160 VSYGTLINGLCKSGETRAALQLLRKIE--GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 217
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++ + PN +TF +LI G C+ Q + A+ +E++ + N ++ IL++GLCK
Sbjct: 218 YSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCK 277
Query: 169 VGQTRAALRLL 179
G+ + A +L
Sbjct: 278 EGEVKRAKSVL 288
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 134/189 (70%), Gaps = 12/189 (6%)
Query: 3 VLRYRWFHRNPTFLLAMPFSSLHSH--------SRSLP-NDAVCLFNRLLQMRHTPSIIE 53
+L+ R+ + + FL+ PF + H S N+ V F+R+L+MR TPSI+E
Sbjct: 1 MLKNRFIYYSNNFLIP-PFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVE 59
Query: 54 FNKILTPLVKTK--HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
FNKIL +VK HY+ AISLSHQ+E +GI P IVT NIL+NCYCHLG+M+ AFS+ AK
Sbjct: 60 FNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAK 119
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
ILK GY P TITF TLI G+CLN ++K AL FHD ++A G L+QVSY LINGLCK+G+
Sbjct: 120 ILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGE 179
Query: 172 TRAALRLLR 180
TRAAL++L+
Sbjct: 180 TRAALQMLK 188
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 82/148 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L++ ++ R +P ++ FN ++ A L H+M + I PD+ T +IL
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G ++ A ++LA ++K+G P+ +T+++L+ G CL ++V +A + G+
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY I+INGL K+ AL L +
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFK 363
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P +N ++ L K K A+SL +M +GI
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD VT N LI+ C LG++S A+ ++ ++ G + +T+ +LI LC N + +A+
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ + +Y ILI+GLCK G+ + A
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P + +N ++ L K S A L +M GI DI+T N L
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSL 415
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G +P+ T+ LI GLC ++K A +LL +G
Sbjct: 416 IDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGY 475
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+N +Y I+INGLCK G A LL
Sbjct: 476 SVNAWTYNIMINGLCKEGLFNEAEVLL 502
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N I+ L K K S A L +M + I PD+VT N LI +C +GQ+ AF +
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF+ L+ LC + + RA ++ QG+ + V+Y L++G C V
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317
Query: 170 GQTRAA 175
+ A
Sbjct: 318 NEVNKA 323
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
I+ +N ++ L K H AI+L +++ +GI P + T NILI+ C G++ A V
Sbjct: 408 DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVF 467
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N T+ +I GLC A ++ GI + V+Y +I L +
Sbjct: 468 QDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527
Query: 170 GQTRAALRLLR 180
+ A +LLR
Sbjct: 528 DENEKAEKLLR 538
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 67/128 (52%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E + + D+V NI+IN C +S A+ + ++
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +TF +LI G C+ Q+K A E++ + I + ++ IL++ LCK G
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284
Query: 172 TRAALRLL 179
A +L
Sbjct: 285 ITRAKNML 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L++ + P+ I FN ++ + A+ + G D V+ LIN
Sbjct: 113 AFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN 172
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L KI + + + + +I LC + V A Q + E++ + I
Sbjct: 173 GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISP 232
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI G C VGQ + A L
Sbjct: 233 DVVTFNSLILGFCVVGQLKEAFGLF 257
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ ++ P + F+ ++ L K + + A ++ M +G++PD+VT + L+
Sbjct: 252 EAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Query: 94 NCYC--------------------------------HLGQMSV---AFSVLAKILKRGYK 118
+ YC LG++ + A S+ ++ +G
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+T+T+ +LI GLC ++ A Q DE+ GI + ++Y LI+ LCK A+ L
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431
Query: 179 LR 180
++
Sbjct: 432 VK 433
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L ++ PS+ +N ++ L K A + + +G + T NI+
Sbjct: 426 DKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM 485
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G + A +L+K+ G P+ +T+ T+I+ L D+ ++A + E++ +G+
Sbjct: 486 INGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Query: 153 QL 154
L
Sbjct: 546 LL 547
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 130/180 (72%), Gaps = 14/180 (7%)
Query: 13 PTFLLAMPFSSL-HSH-----SRSLPNDA-----VCLFNRLLQMRHTPSIIEFNKILTPL 61
P FL+ PF L HSH RS P D V FNR+L+M TPSI+EFNKILT L
Sbjct: 10 PYFLI--PFLPLSHSHFTTLTHRSPPKDVDIDNVVSSFNRMLRMNPTPSIVEFNKILTSL 67
Query: 62 VKTK-HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
VKTK HY+ IS +M+F GI+P IVTL I+INCYCHL +++ AFS+ KILK GY+P+
Sbjct: 68 VKTKTHYNTVISFFRKMQFNGIVPSIVTLGIVINCYCHLREINFAFSLFGKILKMGYQPD 127
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TIT TL+KG CLN +VK AL FHD +LA G QLNQV+Y LINGLCK+G+TRAAL++LR
Sbjct: 128 TITLNTLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTYATLINGLCKMGETRAALQVLR 187
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ LFN + R +P+ + +N ++ L K+ S A L +M G PDI T + L
Sbjct: 355 NEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSL 414
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +++ KI +G +PN T+ LI GLC ++K A +LL +G
Sbjct: 415 IDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGY 474
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN +Y ILINGLCK G A LL
Sbjct: 475 SLNIRTYNILINGLCKEGLFDKAEALL 501
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ +P ++ FN ++ A L HQM + I P+ T NIL+
Sbjct: 216 DAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILV 275
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G + A + LA ++K KP+ +T+ +L+ G CL ++V +A + G+
Sbjct: 276 DALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVA 335
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ SY I+ING CK+ AL L
Sbjct: 336 PDAQSYNIMINGFCKIKMVNEALSLF 361
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P +N ++ K K + A+SL ++M + I
Sbjct: 311 DGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRIS 370
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT N LI+ C G++S A+ ++ ++ G P+ T+++LI LC N+ + +A+
Sbjct: 371 PNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIAL 430
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGIQ N +Y ILI+GLCK G+ + A
Sbjct: 431 VKKIKDQGIQPNMYTYNILIDGLCKGGRLKNA 462
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF++++ P+ FN ++ L K + A + M I PD+VT N L+
Sbjct: 251 EAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLM 310
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A VL+ I + G P+ ++ +I G C V AL +E+ Q I
Sbjct: 311 DGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRIS 370
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A +L+
Sbjct: 371 PNTVTYNSLIDGLCKSGRISHAWKLV 396
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I ++ ++ L K H AI+L +++ +GI P++ T NILI+ C G++ A V
Sbjct: 406 PDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDV 465
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY N T+ LI GLC +A ++ I N V+Y +I L
Sbjct: 466 FQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFY 525
Query: 169 VGQTRAALRLLR 180
A +LLR
Sbjct: 526 KDYNEKAEKLLR 537
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ + A + + G+ PD + NI+IN +C + ++ A S+
Sbjct: 301 PDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSL 360
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + PNT+T+ +LI GLC + ++ A + DE+ G + +Y LI+ LCK
Sbjct: 361 FNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCK 420
Query: 169 VGQTRAALRLLR 180
A+ L++
Sbjct: 421 NNHLDKAIALVK 432
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ ++ I+ L K K A L +M + I PD+VT N LI +C +G++ AF +
Sbjct: 197 DVVMYSIIIDSLCKDKLVIDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLF 256
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + PN TF L+ LC VK A ++ I+ + V+Y L++G C V
Sbjct: 257 HQMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLV 316
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 317 NEVNKAKHVL 326
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 74/142 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +R+L + + + + ++ L K A+ + +++ + + D+V +I+I
Sbjct: 146 EALHFHDRVLALGFQLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIII 205
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C + A+ + ++++ + P+ +TF +LI G C+ ++K A +++ + I
Sbjct: 206 DSLCKDKLVIDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNIN 265
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
N ++ IL++ LCK G + A
Sbjct: 266 PNDYTFNILVDALCKEGNVKGA 287
>Medtr0652s0020.1 | PPR superfamily protein | LC |
scaffold0652:7157-3598 | 20130731
Length = 364
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 9/177 (5%)
Query: 13 PTFLLAMPFSSLHSHSRSLP-------NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT- 64
PTFL + L+S SR +P +++V F +L + +PSI+EFNKIL +VKT
Sbjct: 93 PTFLFPFLRTRLYSQSRFVPSNVDVDVDNSVSSFYDMLSINPSPSIVEFNKILGSIVKTD 152
Query: 65 -KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTIT 123
KHY+ ISLSH++EF GI P++ T NILINCYCHLG+M AFS+L+KILK G++PNT+T
Sbjct: 153 NKHYTTVISLSHRLEFHGITPNLFTFNILINCYCHLGEMDFAFSMLSKILKMGFQPNTVT 212
Query: 124 FTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TL+KG+CLN +VK AL FHD ++A G LNQ++YG LINGLCK+G+T AL++LR
Sbjct: 213 LNTLVKGMCLNGKVKEALHFHDHVIALGFHLNQITYGTLINGLCKMGKTTEALQVLR 269
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 200 bits (509), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 124/167 (74%), Gaps = 5/167 (2%)
Query: 19 MPFSSLHSHSRSL--PN--DAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISL 73
+P LH L PN DAV FNR+L M + TP I EF KIL LVK H+S AIS
Sbjct: 17 LPVRRLHIQPLPLFIPNVDDAVSSFNRILHMNNPTPPIFEFGKILGSLVKMNHFSTAISF 76
Query: 74 SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
SHQME +GI P+IVTL+ILIN +CHL Q++ AFS+L KILK GY+PNT+T TTLI GLCL
Sbjct: 77 SHQMELKGIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCL 136
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
N Q+++AL FHD ++A+G LN VSYGILINGLCK G+T+AAL+LL
Sbjct: 137 NGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLE 183
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN L TP++ +N ++ L K K + A +L +M + PD V+ N L
Sbjct: 316 NKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSL 375
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S + +L ++ G N IT+ +L+ LC N QV +A+ ++ QGI
Sbjct: 376 IDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGI 435
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y IL++GLCK G+ A
Sbjct: 436 QPNMYTYTILVDGLCKNGRLEDA 458
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A LF + TP + +N ++ L K+ S L +M G +++T N L
Sbjct: 351 NEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSL 410
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L KI +G +PN T+T L+ GLC N +++ A + + +LL +G
Sbjct: 411 LDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGY 470
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN Y +++N CK G AL LL
Sbjct: 471 PLNVSMYNVMVNEFCKEGLFDEALSLL 497
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 80/150 (53%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +D L++ ++ + P++I +N ++ A+ L +QM + I PD++T
Sbjct: 209 LVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFT 268
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ C G++ A VLA ++K+ +P+ +T+++L+ G L +V +A + L +
Sbjct: 269 TLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLR 328
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+INGLCK A L +
Sbjct: 329 GVTPNVFSYNIMINGLCKNKMVNEAANLFK 358
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ + P ++ +N I+ L K K S L +M I P+++T N LI
Sbjct: 178 ALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIY 237
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ LGQM A +L ++ + P+ +TFTTL+ GLC +VK+A ++ Q ++
Sbjct: 238 GFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEP 297
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L++G V + A L
Sbjct: 298 DIVTYSSLMDGYFLVKEVNKAKHLFN 323
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ R P I+ ++ ++ K + A L + + RG+ P++ + NI+IN C
Sbjct: 290 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKM 349
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
++ A ++ ++ P+T+++ +LI GLC + ++ E+ G N ++Y
Sbjct: 350 VNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNS 409
Query: 162 LINGLCKVGQTRAALRLLR 180
L++ LCK Q A+ LL+
Sbjct: 410 LLDALCKNHQVDKAIALLK 428
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P+ + ++ L A+ + +G + V+ IL
Sbjct: 106 NYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGIL 165
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A +L KI KP+ + + T+I LC + V + E++ I
Sbjct: 166 INGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKI 225
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y LI G +GQ + A+ LL
Sbjct: 226 HPNVITYNTLIYGFSILGQMKEAVGLLN 253
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K+ A+ L +++ + PD+V N +I+ C +S + + ++
Sbjct: 160 VSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSE 219
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ PN IT+ TLI G + Q+K A+ +++ + I + +++ L++GLCK G+
Sbjct: 220 MIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGE 279
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 280 VKKARHVL 287
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++I +N +L L K AI+L +++ +GI P++ T IL++ C G++ A +
Sbjct: 403 NVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIY 462
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N + ++ C AL ++ G N ++Y LI L +
Sbjct: 463 HDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFEN 522
Query: 170 GQTRAALRLLR 180
+ A++LLR
Sbjct: 523 NKNDKAVKLLR 533
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L ++ P++ + ++ L K A + H + +G ++ N++
Sbjct: 421 DKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVM 480
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N +C G A S+L+K+ G PN IT+ TLI L N++ +A++ E++ +G+
Sbjct: 481 VNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVRGL 540
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 200 bits (508), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 133/185 (71%), Gaps = 10/185 (5%)
Query: 2 SVLRYRWFHRNPTFLLAMPF--SSLH-SHSRSLPN---DAVCLFNRLLQMRHTPSIIEFN 55
S R+R P+FL+ +PF +LH SHSR +PN +A+ FN +L M TPSII+FN
Sbjct: 6 SCFRFRISSSKPSFLI-IPFLTRTLHCSHSRFVPNTVDNAISSFNHMLHMNPTPSIIQFN 64
Query: 56 KILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR 115
KILT LVK Y ISLS ++E R PDI TLNILINCYCH+ QM AFS+ AKILK
Sbjct: 65 KILTSLVKLNQYPTVISLSKKLEIR---PDIFTLNILINCYCHVQQMPFAFSIFAKILKM 121
Query: 116 GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
G++ + IT TTL+KGLCLN +VK +L FHD +LA G QL+ V+YG LINGLCK+G+T+AA
Sbjct: 122 GFESDAITLTTLMKGLCLNGKVKESLHFHDHVLALGFQLDHVTYGTLINGLCKIGETKAA 181
Query: 176 LRLLR 180
L +LR
Sbjct: 182 LLMLR 186
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 28/174 (16%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ R +P+II FN ++ A L +QM + I PDI T NIL+
Sbjct: 215 DAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILV 274
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQV---------------- 137
+ C G++ A +V+A ++K G +P+ +T+ +L+ G CL +V
Sbjct: 275 DVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAA 334
Query: 138 ------------KRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
AL +E+ ++GI ++V+Y LI+GLCK + A +
Sbjct: 335 PDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFV 388
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIE---FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
D CL + + +H +II + L K K A+SL ++M +GI PD VT N
Sbjct: 310 DGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYN 369
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
LI+ C ++ A+ + ++ G N T+ +LI LC N V +A+ ++ Q
Sbjct: 370 SLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQ 429
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
GIQ + +Y ILI+GLCK G+ + A
Sbjct: 430 GIQSDMYTYSILIDGLCKQGRLKDA 454
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LFN + TP + +N ++ L K + A +M GI +I T N L
Sbjct: 347 DEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSL 406
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A ++ KI +G + + T++ LI GLC ++K A +LL +G
Sbjct: 407 IDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGY 466
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN +Y I+INGLC G A LL
Sbjct: 467 NLNVCTYSIMINGLCSKGLFDEATTLL 493
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ N I+ L K K + A L +M + I P+I+T N LI +C +GQ+ AF +
Sbjct: 196 DVVMHNTIIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLF 255
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++L + P+ TF L+ LC ++K A ++ +G++ + V+Y L++G C V
Sbjct: 256 YQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLV 315
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 316 KEVYEAKHVL 325
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF ++L P I FN ++ L K A ++ M G+ PD+VT N L+
Sbjct: 250 EAFGLFYQMLLKNINPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLM 309
Query: 94 NCYCHLGQ----------------------------MSVAFSVLAKILKRGYKPNTITFT 125
+ YC + + + A S+ ++ +G P+ +T+
Sbjct: 310 DGYCLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYN 369
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+LI GLC ++ A +F DE+ A GI N +Y LI+ LCK A+ L++
Sbjct: 370 SLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVK 424
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++E R + D+V N +I+ C ++ A+ + ++
Sbjct: 163 VTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIIDSLCKHKFVTDAYELYSE 222
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + PN ITF +LI G C+ Q+K A ++L + I + ++ IL++ LCK G+
Sbjct: 223 MITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVDVLCKEGK 282
Query: 172 TRAA 175
+ A
Sbjct: 283 IKEA 286
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I +N ++ L K H AI L +++ +GI D+ T +ILI+ C G++ A +
Sbjct: 399 NIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIF 458
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N T++ +I GLC A ++ G + V+Y + L K
Sbjct: 459 QDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPINRALFKN 518
Query: 170 GQTRAALRLLR 180
+ A +LLR
Sbjct: 519 DENDKAEQLLR 529
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Query: 14 TFLLAMPFSSLHSHSRSLPN--DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAI 71
TFLL +S H +PN DAV FNR+L + TP I EF KIL+ LVK H+ AI
Sbjct: 24 TFLLRF-YSFSHPLPSFIPNVDDAVSSFNRILNINPTPPIFEFGKILSSLVKLNHFHTAI 82
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
S S QME +GI P+IVTL ILIN +CHL Q++ AFS+L KILK GY+PNT+T TTLI GL
Sbjct: 83 SFSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGL 142
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
CLN +VK+A F+D+++A+ QLNQ SYGILINGLCK G+T+AAL LLR
Sbjct: 143 CLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLR 191
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 84/143 (58%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + ++I + ++ L K + AI+L +M+ G+ P++ T NILI+ C
Sbjct: 399 LIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLC 458
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+++ A+ ++ ++ RG N +T+T+LI GLC N + +A++F ++ GIQ +
Sbjct: 459 KSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVH 518
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +LI+GLCK G+ + AL + R
Sbjct: 519 TYTVLIDGLCKGGRLKNALEVFR 541
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +F +++ +P+I +N ++ L +K A++L +M R ++P+ VT N L
Sbjct: 324 NKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSL 383
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++S ++ ++ RG N IT+T+L+ LC N + +A+ ++ G+
Sbjct: 384 IYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGV 443
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N +Y ILI+ LCK G+ A L+
Sbjct: 444 EPNVYTYNILIDRLCKSGRIADAWYLI 470
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 81/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L DA L++ +++ + P+++ ++ ++ A+ L ++M + I PD+ T N
Sbjct: 217 LVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFN 276
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI+ C G+M A ++L ++K G K N +T+++L+ G ++V +A + ++
Sbjct: 277 ILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRW 336
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+I+GLC A+ L +
Sbjct: 337 GVSPNIHSYNIMIDGLCNSKMVDEAVNLFK 366
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 72/123 (58%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L K+ A+SL +E + PD+V +I+ C ++ A+ + ++++++
Sbjct: 173 LINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKK 232
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
PN +T++TLI G C+ Q+K A++ +E++ + I + ++ ILI+GLCK G+ R A
Sbjct: 233 IFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKAR 292
Query: 177 RLL 179
LL
Sbjct: 293 NLL 295
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LF ++ + P++ +N ++ L K+ + A L +M RG ++VT L
Sbjct: 429 DKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSL 488
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A KI G + + T+T LI GLC ++K AL+ LL +G
Sbjct: 489 IDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGY 548
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ ++Y ++I+GLCK G L LL
Sbjct: 549 HLDVLTYTVMISGLCKEGLFDEVLTLL 575
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 69/127 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ + I+ L K K + A L +M + I P++VT + LI +C +GQ+ A +
Sbjct: 200 PDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRL 259
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ + P+ TF LI GLC N ++++A ++ G++LN V+Y L++G +
Sbjct: 260 FNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQ 319
Query: 169 VGQTRAA 175
V + A
Sbjct: 320 VNEVNKA 326
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF ++ P+ + +N ++ L K+ S + L +M RG +++T L
Sbjct: 359 DEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSL 418
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++ K+ G +PN T+ LI LC + ++ A DE+ +G
Sbjct: 419 MDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQ 478
Query: 153 QLNQVSYGILINGLCK 168
N V+Y LI+GLCK
Sbjct: 479 PANVVTYTSLIDGLCK 494
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P+ + ++ L A + + + + IL
Sbjct: 114 NFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGIL 173
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A S+L I KP+ + +TT+I LC + V A + + E++ + I
Sbjct: 174 INGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKI 233
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI G C VGQ + A+RL
Sbjct: 234 FPNVVTYSTLIYGFCIVGQLKDAVRLFN 261
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV LFN ++ P + FN ++ L K A +L M G+ ++VT + L+
Sbjct: 255 DAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLM 314
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + +++ A V +++ G PN ++ +I GLC + V A+ ++ + +
Sbjct: 315 DGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMV 374
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI GLCK G+ L L+
Sbjct: 375 PNTVTYNSLIYGLCKSGRISYVLDLI 400
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ ++ + + A + M G+ P+I + NI+I+ C+ + A ++
Sbjct: 306 NVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLF 365
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K+ R PNT+T+ +LI GLC + ++ L DE+ +G N ++Y L++ LCK
Sbjct: 366 KKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKN 425
Query: 170 GQTRAALRLL 179
A+ L
Sbjct: 426 HNLDKAIALF 435
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + + +++ + ++ L K + AI ++ GI D+ T +LI
Sbjct: 465 DAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLI 524
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ A V +L +GY + +T+T +I GLC L ++ G
Sbjct: 525 DGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCA 584
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y I+I L G+ A +LL
Sbjct: 585 PDAITYEIIICALFGKGKIDMAEKLL 610
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 132/187 (70%), Gaps = 14/187 (7%)
Query: 2 SVLRYRWFHRNPTFLLAMPFSSL--HSHSRSLP------NDAVCLFNRLLQMRHTPSIIE 53
S+LRY +LL P S L H + LP +DAV FNR+L + TP + E
Sbjct: 17 SMLRYATL-----YLLPTPNSYLLRRLHIQPLPSFINNVDDAVSSFNRILHISSTP-VFE 70
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
F KIL+ LVK ++ A+S SHQME +GI PDIVTL+ILIN +CHL Q++ AFS+L KIL
Sbjct: 71 FGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKIL 130
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K GY+PNT+T TTLI GLCLN Q+++AL FHD ++A+G LN VSYGILINGLCK G+T+
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 174 AALRLLR 180
AAL+LL
Sbjct: 191 AALQLLE 197
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN L TP++ +N ++ L K K A++L +M + ++P+ VT N L
Sbjct: 302 NKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSL 361
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S + + ++ RG + IT+ +L GLC N QV RA+ ++ QGI
Sbjct: 362 IDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGI 421
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + SY IL GLCK G+ A + R
Sbjct: 422 QPSMYSYTILFVGLCKNGRLEDAQEVYR 449
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF + P+ + +N ++ L K S +M RG DI+T N L
Sbjct: 337 DEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSL 396
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C Q+ A ++L KI +G +P+ ++T L GLC N +++ A + + +L +G
Sbjct: 397 FDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGY 456
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y ++INGLCK G AL LL
Sbjct: 457 HLDAKMYTVMINGLCKEGFFDEALSLL 483
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ R P I+ ++ ++ K + A L + + RG+ P++ + NI+IN C
Sbjct: 276 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKM 335
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A ++ ++ + PNT+T+ +LI GLC +V F DE+ +G + ++Y
Sbjct: 336 VDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNS 395
Query: 162 LINGLCKVGQTRAALRLLR 180
L +GLCK Q A+ LL+
Sbjct: 396 LFDGLCKNHQVDRAIALLK 414
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS- 107
P ++ +N I+ L K K S L +M I P+++T N LI + LGQM A
Sbjct: 206 PDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGE 265
Query: 108 ------VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
VLA ++K+ +P+ +T+++L+ G L +V +A + L +G+ N SY I
Sbjct: 266 VKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNI 325
Query: 162 LINGLCKVGQTRAALRLLR 180
+INGLCK A+ L +
Sbjct: 326 MINGLCKNKMVDEAVNLFK 344
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P+ + ++ L A+ + +G + V+ IL
Sbjct: 120 NYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGIL 179
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A +L KI KP+ + + T+I LC + V + E++ I
Sbjct: 180 INGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKI 239
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
N ++Y LI G +GQ + A+
Sbjct: 240 HPNVITYNTLIYGFSILGQMKEAV 263
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 21 FSSLHSHSRSLPN--------DAVCLFNRL---------LQMRHTPS-IIEFNKILTPLV 62
F +HS +PN D +C R+ + R P+ II +N + L
Sbjct: 343 FKEMHSKDM-IPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLC 401
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K AI+L +++ +GI P + + IL C G++ A V + +GY +
Sbjct: 402 KNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAK 461
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+T +I GLC AL ++ G + V+Y I+I L + + A++ +R
Sbjct: 462 MYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIR 519
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ PS+ + + L K A + + +G D ++IN
Sbjct: 409 AIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMIN 468
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
C G A S+L+K+ G P+ +T+ +I+ L +D+ +A++F E++A+G+
Sbjct: 469 GLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 132/187 (70%), Gaps = 14/187 (7%)
Query: 2 SVLRYRWFHRNPTFLLAMPFSSL--HSHSRSLP------NDAVCLFNRLLQMRHTPSIIE 53
S+LRY +LL P S L H + LP +DAV FNR+L + TP + E
Sbjct: 17 SMLRYATL-----YLLPTPNSYLLRRLHIQPLPSFINNVDDAVSSFNRILHISSTP-VFE 70
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
F KIL+ LVK ++ A+S SHQME +GI PDIVTL+ILIN +CHL Q++ AFS+L KIL
Sbjct: 71 FGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILINSFCHLNQLNYAFSILGKIL 130
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K GY+PNT+T TTLI GLCLN Q+++AL FHD ++A+G LN VSYGILINGLCK G+T+
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 174 AALRLLR 180
AAL+LL
Sbjct: 191 AALQLLE 197
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN L TP++ +N ++ L K K A++L +M + ++P+ VT N L
Sbjct: 302 NKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSL 361
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S + + ++ RG + IT+ +L GLC N QV RA+ ++ QGI
Sbjct: 362 IDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGI 421
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + SY IL GLCK G+ A + R
Sbjct: 422 QPSMYSYTILFVGLCKNGRLEDAQEVYR 449
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF + P+ + +N ++ L K S +M RG DI+T N L
Sbjct: 337 DEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSL 396
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C Q+ A ++L KI +G +P+ ++T L GLC N +++ A + + +L +G
Sbjct: 397 FDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGY 456
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y ++INGLCK G AL LL
Sbjct: 457 HLDAKMYTVMINGLCKEGFFDEALSLL 483
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ R P I+ ++ ++ K + A L + + RG+ P++ + NI+IN C
Sbjct: 276 MIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKM 335
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A ++ ++ + PNT+T+ +LI GLC +V F DE+ +G + ++Y
Sbjct: 336 VDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNS 395
Query: 162 LINGLCKVGQTRAALRLLR 180
L +GLCK Q A+ LL+
Sbjct: 396 LFDGLCKNHQVDRAIALLK 414
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS- 107
P ++ +N I+ L K K S L +M I P+++T N LI + LGQM A
Sbjct: 206 PDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGE 265
Query: 108 ------VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
VLA ++K+ +P+ +T+++L+ G L +V +A + L +G+ N SY I
Sbjct: 266 VKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNI 325
Query: 162 LINGLCKVGQTRAALRLLR 180
+INGLCK A+ L +
Sbjct: 326 MINGLCKNKMVDEAVNLFK 344
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P+ + ++ L A+ + +G + V+ IL
Sbjct: 120 NYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGIL 179
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A +L KI KP+ + + T+I LC + V + E++ I
Sbjct: 180 INGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKI 239
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
N ++Y LI G +GQ + A+
Sbjct: 240 HPNVITYNTLIYGFSILGQMKEAV 263
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 21 FSSLHSHSRSLPN--------DAVCLFNRL---------LQMRHTPS-IIEFNKILTPLV 62
F +HS +PN D +C R+ + R P+ II +N + L
Sbjct: 343 FKEMHSKDM-IPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLC 401
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K AI+L +++ +GI P + + IL C G++ A V + +GY +
Sbjct: 402 KNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAK 461
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+T +I GLC AL ++ G + V+Y I+I L + + A++ +R
Sbjct: 462 MYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIR 519
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ PS+ + + L K A + + +G D ++IN
Sbjct: 409 AIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMIN 468
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
C G A S+L+K+ G P+ +T+ +I+ L +D+ +A++F E++A+G+
Sbjct: 469 GLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
Query: 19 MPFSSLHS--HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P+SS+ + HS + +DAV LFN LL T + EFNKIL LVK+KHY +SLS Q
Sbjct: 50 IPYSSISTTFHSNDV-DDAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQ 108
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEF GI P+ VT NILINC+C LG + AFSVLAKILK GY+P+ IT T IKG CL Q
Sbjct: 109 MEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQ 168
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD+L+A G L+QVSYG LINGLCKVG+TRAAL+LLR
Sbjct: 169 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLR 212
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN+++ P + FN ++ K A ++ M + I P++ T N L+
Sbjct: 276 DAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV 335
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C +M +V A ++K+G KPN +T+ +L+ G CL QV +A + + + +G+
Sbjct: 336 DGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 395
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N SY I+ING CK+ + A++L
Sbjct: 396 ANVHSYNIMINGFCKIKKVDKAMKLF 421
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ R +P ++ ++ ++ AI L ++M I PD+ T NIL
Sbjct: 240 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 299
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++ A +VL ++ + KPN TF TL+ G C + ++K ++ QGI
Sbjct: 300 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 359
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y L++G C V Q A ++
Sbjct: 360 KPNVVTYCSLMDGYCLVKQVNKAKKIF 386
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q T ++ +N ++ K K A+ L +M + I+PD+VT N L
Sbjct: 380 NKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 439
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S AF ++ ++ RG PN IT+ +++ L +L QGI
Sbjct: 440 IDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT------------KLKDQGI 487
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N + ILI GLC+ G+ AA ++
Sbjct: 488 QPNMHTDTILIKGLCQSGKLEAARKVFE 515
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 63/117 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + K KH + A L +M + I PD+VT + LI + +G++ A + K
Sbjct: 224 VMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 283
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ KP+ TF L+ G C ++K+A D ++ Q I+ N ++ L++G CK
Sbjct: 284 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCK 340
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + ++L+M + P II N + A++ ++ G D V+ LIN
Sbjct: 137 AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLIN 196
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L ++ + + N + + T+I G+ + V A + E++A+ I
Sbjct: 197 GLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISP 256
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI G VG+ + A+ L
Sbjct: 257 DVVTYSALIRGFFIVGKLKDAIDLF 281
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 196 bits (499), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQMEFRGIMPDIVTLN 90
ND V F+R+L MR TPSI+EFNKIL LVKT HY+ AISLSHQ+E GI D VT N
Sbjct: 51 NDHVSSFHRMLLMRPTPSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFN 110
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILINCYCHLG+M+ AFS+ AKILK G+ P TITF TLI G+CLN ++K AL FHD +LA
Sbjct: 111 ILINCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAH 170
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
LNQV+Y LINGLCK+G+T AL+LLR
Sbjct: 171 EFHLNQVTYAKLINGLCKMGKTTEALQLLR 200
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H P +N ++ K K + A SL ++M RGI
Sbjct: 324 DGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGIS 383
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+ VT + LI+ C LG++S A+ + ++ G P+ T+ +LI LC N V +A+
Sbjct: 384 PNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVL 443
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ QGIQLN +Y ILI+GLCK G+ + A LL
Sbjct: 444 VKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLN 480
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
L +A L+++++ + +P ++ FN ++ A L H+M + I P++ T
Sbjct: 224 EKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYT 283
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
NIL++ C G + A ++LA ++K G PN +T+++++ G CL ++V +A +
Sbjct: 284 FNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTIT 343
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ A L
Sbjct: 344 RMGVPPDAQSYNIMINGFCKIKMINEAFSLFN 375
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++I N I+ L K K + A L QM + I PD+VT N LI +C +GQ+ AF +
Sbjct: 210 NVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLF 269
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + PN TF L+ LC +K A ++ +G+ N V+Y +++G C V
Sbjct: 270 HEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLV 329
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 330 NEVNKAKHVL 339
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + K++ L K + A+ L +++ + + +++ N +I+ C ++ A+ + ++
Sbjct: 177 VTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQ 236
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +TF +LI G C+ Q+ A E++ + I N ++ IL++ LCK G
Sbjct: 237 MIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGN 296
Query: 172 TRAALRLL 179
+ A LL
Sbjct: 297 LKGAKNLL 304
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 34 DAVCLFNRLL-------QMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D +C R+ +MR P I +N ++ L K H AI L +++ +GI
Sbjct: 394 DGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQ 453
Query: 84 PDIVTLNILINCYCHLGQM-------SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
++ T NILI+ C G++ + A ++L+K+ G P+ +T T+I+ L ND+
Sbjct: 454 LNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDK 513
Query: 137 VKRALQFHDELLAQGI 152
+RA + E++A+G+
Sbjct: 514 NERAEKLLREMIARGL 529
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A LFN + +P+ + ++ ++ L K S A +M G PDI T N L
Sbjct: 368 NEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSL 427
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA---LQFHDELLA 149
I+ C + A ++ KI +G + N T+ LI GLC ++K A L + LL+
Sbjct: 428 IDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLS 487
Query: 150 Q----GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G + V+ +I L + + A +LLR
Sbjct: 488 KMEDNGCVPDAVTCETIIRALFENDKNERAEKLLR 522
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 196 bits (499), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 117/154 (75%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
HS + +DAV LFNRLL+ TP EFNKIL LVK+KHY + LS +MEFRGI P++
Sbjct: 61 HSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNL 120
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
V NILINC+C LG + AFSV AKILK GY P+TITFTTLIKGLCL Q+++A FHD+
Sbjct: 121 VNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDK 180
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++A G +Q+SYG LI+GLCKVG+TRAAL LL+
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ 214
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 83/150 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A LF+ ++ +P ++ ++ +++ + AI L ++M I PD+ T N
Sbjct: 240 LVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL+N +C G+M +V ++K+G KPN +T+ +L+ G CL +V +A + +
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ + A+ L +
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 83/147 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P ++ ++ ++ L K+ S A+ L QM RG+ P I T N +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + Q+ A ++L K+ +G +PN T++ LIKGLC + +++ A + + LL +G
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN +Y I+I G C G AL LL
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALL 528
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I ++ ++ K K + A++L +M + I+PD+VT + L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A ++ ++ RG P T+ +++ LC QV +A+ +L +GI
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N +Y ILI GLC+ G+ A ++
Sbjct: 467 QPNMYTYSILIKGLCQSGKLEDARKVFE 494
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ + K K + A L +M +GI PD+VT + LI+ +C LG+++ A +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K++ KP+ TF L+ C + ++K D ++ QGI+ N V+Y L++G C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 169 VGQTRAA 175
V + A
Sbjct: 343 VKEVNKA 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 79/142 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ +++ P+ + +N ++ K + A S+ + M G+ PDI + +I+IN +C
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + A ++ ++ ++ P+ +T+++LI GL + ++ ALQ D++ +G+
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK+ Q A+ LL
Sbjct: 437 TYNSILDALCKIHQVDKAIALL 458
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I +N IL L K AI+L +++ +GI P++ T +ILI C G++ A V
Sbjct: 433 PTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKV 492
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +G+ N T+T +I+G C+ AL ++ G + +Y I+I L K
Sbjct: 493 FEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFK 552
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 553 KDENDMAEKLLR 564
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 68/124 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I + ++ L K A+ L +++ + P++V N +I+ C + ++ AF + ++
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ +G P+ +T++ LI G C+ ++ A+ ++++ + I+ + ++ IL+N CK G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 172 TRAA 175
+
Sbjct: 311 MKEG 314
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/154 (61%), Positives = 116/154 (75%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
HS + +DAV LFNRLL+ TP EFNKIL LVK+KHY + LS +MEFRGI P++
Sbjct: 61 HSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNL 120
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
V NILINC+C LG + AFSV AKILK GY P+TITFTTL KGLCL Q+++A FHD+
Sbjct: 121 VNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDK 180
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++A G +Q+SYG LI+GLCKVG+TRAAL LL+
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQ 214
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A LF+ ++ +P ++ ++ +++ AI L ++M I PD+ T N
Sbjct: 240 LVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL+N +C G+M +V ++K+G KPN +T+ +L+ G CL +V +A + +
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ + A+ L +
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P ++ ++ ++ L K+ S A+ L QM RG+ P+I T N +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K +G++P+ T++ LIKGLC + +++ A + ++LL +G
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y I+I G C G AL LL
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALL 528
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ + K K + A L +M +GI PD+VT + LI+ +C LG++ A +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K++ KP+ TF L+ C + ++K D ++ QGI+ N V+Y L++G C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 169 VGQTRAA 175
V + A
Sbjct: 343 VKEVNKA 349
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I ++ ++ K K + A++L +M + I+PD+VT + L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A ++ ++ RG PN T+ +++ LC QV +A+ + +G
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y ILI GLC+ G+ A ++
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFE 494
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 79/142 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ +++ P+ + +N ++ K + A S+ + M G+ PDI + +I+IN +C
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + A ++ ++ ++ P+ +T+++LI GL + ++ ALQ D++ +G+ N
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK Q A+ LL
Sbjct: 437 TYNSILDALCKTHQVDKAIALL 458
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN+++ P + FN ++ K ++ M +GI P+ VT N L+
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A S+ + + G P+ +++ +I G C + A+ E+ + I
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GL K G+ AL+L+
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLV 423
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I +N IL L KT AI+L + + +G PDI T +ILI C G++ A V
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY + +T +I+G C+ AL ++ G + +Y I+I L K
Sbjct: 493 FEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFK 552
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 553 KDENDMAEKLLR 564
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 69/124 (55%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I + ++ L K A+ L +++ + P++V N +I+ C + ++ AF + ++
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ +G P+ +T++ LI G C+ ++K A+ ++++ + I+ + ++ IL+N CK G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 172 TRAA 175
+
Sbjct: 311 MKEG 314
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L+M + P I F + L A ++ G D ++ LI+
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L ++ +PN + + T+I +C V A E++++GI
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+G C +G+ + A+ L
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLF 283
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 193 bits (491), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 126/179 (70%), Gaps = 8/179 (4%)
Query: 9 FHRNPTFLLAMPFSSLHSHSRSLP------NDAVCLFNRLLQMRH-TPSIIEFNKILTPL 61
F P L S L+ +++ LP +DAV FN +L MR+ I EFNKIL+ L
Sbjct: 16 FPSTPNLFLLCRHSRLY-YTQPLPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSL 74
Query: 62 VKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNT 121
VK H+ AIS S QME + I PD+ T NILINC+CHLG ++ AFSVLAKI K G+ P+T
Sbjct: 75 VKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDT 134
Query: 122 ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+T TTLIKGLCLN +V+ AL FHD+++A+G L+QVSYG LINGLCK G+TRAAL++LR
Sbjct: 135 VTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLR 193
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 82/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF + P+ + +N ++ L+K S A L ++M RG D++T + L
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A +++ KI +G +PN T+T L+ GLC N ++K A + +LL +G
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y +++NGLCK G AL L+
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLV 507
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 83/143 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + + TP + ++ ++ L KTK A++L +M + + P+ VT N L
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A+ ++ ++ RG + IT+++L+ LC N QV +A+ ++ QGI
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y IL++GLCK G+ + A
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDA 468
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + ++ R P ++ + ++ + A+ L +QM + I PD+ T NIL++ C
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLC 285
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A +VLA ++K+G N +T+ +L+ G L Q +A + + +G+ +
Sbjct: 286 KEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQ 345
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SY I+INGLCK A+ L +
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFK 368
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LFN++L P + FN ++ L K A ++ M +G+ +IVT N L+
Sbjct: 257 EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM 316
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + Q + A V + +RG P+ +++ +I GLC V A+ E+ ++ +
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GL K G+ A L+
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLV 402
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ L K K A L +M + I PD+VT LI +G++ A +
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L + KP+ TF L+ GLC ++K+A ++ QG+ N V+Y L++G
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321
Query: 169 VGQTRAA 175
V Q A
Sbjct: 322 VKQENKA 328
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L N + +I ++ +L L K AI+L +++ +GI P+I T IL
Sbjct: 396 SDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTIL 455
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A +V +L +GY + + ++ GLC AL ++ G
Sbjct: 456 VDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGC 515
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L+ L + + A++LLR
Sbjct: 516 IPDAVTYETLVRALFENDKNDKAVKLLR 543
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 71/128 (55%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L KT A+ + +++ + P++V N +I+ C + A + ++
Sbjct: 170 VSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSE 229
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +T+TTLI G + ++K A+ +++L + I+ + ++ IL++GLCK G+
Sbjct: 230 MIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGE 289
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 290 MKKARNVL 297
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 59/119 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L ++ P+I + ++ L K A ++ + +G D+ N++
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVM 490
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+N C G A S+++K+ G P+ +T+ TL++ L ND+ +A++ E++ QG
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++ ++ P + ++ L A+ + +G D V+ L
Sbjct: 116 NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTL 175
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ A VL KI +PN + + T+I LC + V A E++ + I
Sbjct: 176 INGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI G VG+ + A+ L
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLF 262
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 191 bits (485), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
Query: 9 FHRNPTFLLAMPFSSLHS-HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHY 67
F N F FS+ + H+ + DAV LFN LL+ TP +EF +IL LVK+KHY
Sbjct: 27 FPENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHY 86
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
+SL +ME+RGI P+ V NILINC+C LG + AFSVLAKILK GY+P+TIT T
Sbjct: 87 HTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTF 146
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
IKG CL Q+ +AL FHD+L+A G L+QVSYG LINGLCKVG+TRAAL LLR
Sbjct: 147 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 84/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ R + +I+ ++ +++ AI L ++M I PD+ T NIL
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++ A + LA ++K+G KP+ +T+ +L+ G CL ++V A + + +G+
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
SY I+ING CK+ A++L +
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFK 374
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNR-------LLQMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N L M H T ++ +N ++ K K A+ L +M + I
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+++T N LI+ C G++S A ++ + RG +P+ IT+++++ LC N V +A+
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+L QGI+ N +Y ILI+GLCK G+ A
Sbjct: 443 LIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LF + + P++I +N ++ L K+ S A+ L M RG PDI+T + +
Sbjct: 367 DQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L K+ +G +PN T+T LI GLC +++ A ++LL +G
Sbjct: 427 LDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGY 486
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L +Y ++I G C G AL LL
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLL 513
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN++ P + FN ++ K A + M +GI PDIVT N L+
Sbjct: 263 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + ++++A S+L + RG ++ +I G C V +A++ E+ + I
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y LI+GLCK G+ AL L+
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELI 408
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ ++ I+ + K K+ + A L +M R I +IVT + LI+ +C +G++ A +
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLF 268
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K+ P+ TF L+ C +VK A ++ QGI+ + V+Y L++G C V
Sbjct: 269 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 329 NEVNMAKSIL 338
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 21 FSSLHSHSRSLPN--------DAVCLFNR------LLQMRHT----PSIIEFNKILTPLV 62
F +H H + PN D +C R L+ + H P II ++ IL L
Sbjct: 373 FKEMH-HKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALC 431
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K AI+L +++ +GI P++ T ILI+ C G++ A ++ +L +GY
Sbjct: 432 KNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVN 491
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+T +I+G C + AL ++ + ++Y I+I L + A +LLR
Sbjct: 492 TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLR 549
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + D+V + +I+ C ++ AF + ++
Sbjct: 176 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSE 235
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ R N +T++ LI G C+ ++K A+ +++ ++ I + ++ IL++ CK G+
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295
Query: 172 TRAA 175
+ A
Sbjct: 296 VKEA 299
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 1/170 (0%)
Query: 12 NPTFLLAMP-FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIA 70
NP F+++ +S LH H + + V FNR+L + TP I EF KIL LVK Y A
Sbjct: 16 NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75
Query: 71 ISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
ISL +MEF GI D+VT NILINC+ LG +FSV A ILK+GY+PN IT TTLIKG
Sbjct: 76 ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135
Query: 131 LCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
LCL Q+ +AL FHD+++A G LN+V YG LINGLCKVGQT AAL+LLR
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLR 185
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 86/150 (57%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A L++ ++ +P ++ ++ +++ + AI L ++M I PD+ T +
Sbjct: 211 LVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFS 270
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A +VLA ++K+G KP+ +T+ +L+ G CL QV +A + +
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+ING CK+ + A+ L +
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFK 360
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q T ++ +N ++ K K A++L +M + I+PD+VT N L
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG + IT+ +++ LC N QV +A+ ++ +GI
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y ILI+GLCK G+ + A +
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFE 465
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P ++ +N ++ L K+ S A+ L +M RG+ D +T N +
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K+ G +P+ T+T LI GLC ++K A ++LL +G
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGY 472
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ++I G C AL LL
Sbjct: 473 NITVYTYTVMIQGFCDNDLFDKALALL 499
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LFN+++ P + F+ ++ K A ++ M +GI PD+VT L
Sbjct: 248 NDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSL 307
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC + Q++ A S+ + + G N ++ +I G C +V A+ E+ + I
Sbjct: 308 MDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GLCK G+ AL+L+
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLV 394
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
H R +P+D I +N IL L K AI+L +M+ GI PD+
Sbjct: 398 HDRGVPHDK----------------ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDM 441
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
T ILI+ C G++ A ++ +L +GY T+T +I+G C ND +AL +
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSK 501
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G N +Y I+I L + + A +LLR
Sbjct: 502 MEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLR 535
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 73/126 (57%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K S A+ L +++ + + P++V N +I+ C + ++ AF + ++++
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+G P+ +T++ LI G C+ ++ A+ ++++++ I + ++ IL++G CK G+ +
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 174 AALRLL 179
A +L
Sbjct: 284 EAKNVL 289
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 12 NPTFLLAM-PF---------SSLHSHSRSLPNDAVCLFNRLLQMRH-TPSIIEFNKILTP 60
NP FL+ + PF S H + + N V FNRLL ++ PSI +F KIL
Sbjct: 23 NPNFLIRLLPFSSSSSTRLYSQFHENDDNKHN-LVSSFNRLLHQKNPKPSIFQFGKILGS 81
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
LVK+ HYS +SL QMEF GI D+V L+ILINC+ LGQ ++FSVLAKILK GY+PN
Sbjct: 82 LVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPN 141
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
IT TTLIKGLCL Q+ +ALQFHD+++A G LN+VSYG LINGLCKVGQT AAL+LLR
Sbjct: 142 VITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLR 201
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 83/150 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A L++ ++ +P ++ +N +++ A L ++M F I P++ T N
Sbjct: 227 LVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C ++ A +VLA ++K+G KP+ T+ +L+ CL +V +A + + +
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+I+G CK+ + A+ L +
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFK 376
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P+I ++ ++ K K A++L +M I+PD+VT N L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S A ++ ++ RG + IT+ +++ LC N QV +A+ ++ +GI
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q + +Y L++GLCK G+ A
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDA 476
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LFN+++ P++ FN ++ K + A ++ M +GI PD+ T N L+
Sbjct: 265 DATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A + I +RG PN +++ +I G C +V A+ E+ I
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GLCK+G+ AL+L+
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLV 410
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P ++ +N ++ L K S A+ L +M RG+ D +T N +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K+ G +P+ T+TTL+ GLC N +++ A ++LL +G
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y +I G C G +L LL
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLL 515
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ + K K + A L +M +GI PD+VT N LI+ +C +G+M A +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K++ PN TF L+ G C ++K A ++ QGI+ + +Y L++ C
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329
Query: 169 VGQTRAA 175
V + A
Sbjct: 330 VKEVNKA 336
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
++L+M + P++I ++ L A+ ++ G + V+ LIN C +G
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
Q S A +L ++ + +PN + + T+I +C V A + E++++GI + V+Y
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 161 ILINGLCKVGQTRAALRLL 179
LI+G C VG+ + A L
Sbjct: 252 ALISGFCIVGKMKDATDLF 270
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 71/128 (55%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K S A+ L +++ + + P++V N +I+ C + ++ AF + ++
Sbjct: 178 VSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 237
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ +G P+ +T+ LI G C+ ++K A ++++ + I N ++ IL++G CK +
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 298 LKEAKNVL 305
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
H R +P+D I +N IL L K AI+L +M+ GI PDI
Sbjct: 414 HDRGVPHDK----------------ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
T L++ C G++ A V +L +GY + +T +I+G C + +L +
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G N V+Y I+I L + A +LLR
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLR 551
>Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:13907484-13905015 | 20130731
Length = 245
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 115/150 (76%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQMEFRGIMPDIVTLN 90
++AV FN +L + P IIEFNKIL LVK+K HY AISL +Q+E + PDIVT N
Sbjct: 26 DNAVSSFNHMLCVNPPPPIIEFNKILGSLVKSKNNHYPTAISLFNQLELNRVTPDIVTFN 85
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+INCYCHLG+++ AFS+L KILK G++PN +T TTLIKG+CLN VK AL FH+ +LA
Sbjct: 86 IVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGMCLNSNVKEALHFHNHVLAH 145
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G L+QVSYG LI GLCK+G+TRAAL++LR
Sbjct: 146 GFHLDQVSYGTLIYGLCKIGETRAALQMLR 175
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LFN+L R TP I+ FN ++ + A SL ++ G P+IVTL LI
Sbjct: 65 AISLFNQLELNRVTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIK 124
Query: 95 CYC--------------------HLGQMS---------------VAFSVLAKILKRGYKP 119
C HL Q+S A +L KI +
Sbjct: 125 GMCLNSNVKEALHFHNHVLAHGFHLDQVSYGTLIYGLCKIGETRAALQMLRKIEGKLVNT 184
Query: 120 NTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + +T +I LC N V A + + E++ + I N V++ LI G C VGQ + ++
Sbjct: 185 DVVMYTAIIDSLCKNKDVNDAYELYSEMITKRISPNVVTFSALIYGFCMVGQFKTSI 241
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 187 bits (474), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 108/143 (75%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+FN LL TP IEF KIL LVK+KHY +SLS +MEF GI D+V +ILIN +C
Sbjct: 1 MFNHLLHKNSTPPDIEFGKILGSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSILINSFC 60
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
LG + AFSVLAKILK GY+P+TITFTTLIKGLCL + +AL FHD+++A G L+QV
Sbjct: 61 QLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQV 120
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SYG LINGLCKVG+TRAAL LLR
Sbjct: 121 SYGTLINGLCKVGETRAALELLR 143
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 88/148 (59%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ + R +P+++ ++ +++ AI L ++M I P++ T +IL
Sbjct: 171 NDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSIL 230
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++ A +VLA ++K+G KP+ +T+++L+ G CL ++V +A + + +G+
Sbjct: 231 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 290
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N SY I+ING CK+ A++L +
Sbjct: 291 TANVQSYSIMINGFCKIKMVDEAMKLFK 318
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 83/147 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P +I ++ ++ L K+ S A+ L +M RG PDI+T N +
Sbjct: 311 DEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSI 370
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L K+ +G +P+ T+T L+KGLC + +++ A + ++LL +G
Sbjct: 371 LDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGY 430
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y ++I G C G AL LL
Sbjct: 431 NLDVYAYTVMIQGFCDKGLFDEALALL 457
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + T ++ ++ ++ K K A+ L +M + I PD++T + L
Sbjct: 276 NKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSAL 335
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG +P+ IT+ +++ LC V +A+ +L QGI
Sbjct: 336 IDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGI 395
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +Y IL+ GLC+ G+ A ++
Sbjct: 396 RPDMNTYTILVKGLCRSGKLEDARKVFE 423
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ I+ + K KH + A L +M + I P++VT + LI+ +C +G++ A + K++
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 216
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
PN TF+ L+ G C +VK A ++ QGI+ + V+Y L++G C V +
Sbjct: 217 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 276
Query: 174 AA 175
A
Sbjct: 277 KA 278
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II +N IL L K H AI+L +++ +GI PD+ T IL+
Sbjct: 348 ALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVK 407
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A V +L +GY + +T +I+G C AL ++ G
Sbjct: 408 GLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 467
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y I+I L + + A +LLR
Sbjct: 468 DAKTYEIIILSLFEKDENDMAEKLLR 493
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 35/181 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN+++ P++ F+ ++ K A ++ M +GI PD+VT + L+
Sbjct: 207 DAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLM 266
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYK----------------------------------- 118
+ YC + +++ A S+ + RG
Sbjct: 267 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIF 326
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+ IT++ LI GLC + ++ AL+ DE+ +G Q + ++Y +++ LCK A+ L
Sbjct: 327 PDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIAL 386
Query: 179 L 179
L
Sbjct: 387 L 387
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 73/140 (52%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
++++ M + + ++ L K A+ L +++ + + D V + +I+ C
Sbjct: 108 DKVIAMGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKD 167
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ AF + +++ + PN +T++ LI G C+ ++K A+ ++++ + I N ++
Sbjct: 168 KHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTF 227
Query: 160 GILINGLCKVGQTRAALRLL 179
IL++G CK G+ + A +L
Sbjct: 228 SILVDGFCKEGRVKEAKNVL 247
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + ++L+ + P I F ++ L A+ ++ G D V+ LIN
Sbjct: 68 AFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLIN 127
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L ++ + + + + ++++I +C + V A + E+ A+ I
Sbjct: 128 GLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISP 187
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+G C VG+ + A+ L
Sbjct: 188 NVVTYSALISGFCIVGKLKDAIDLF 212
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 186 bits (473), Expect = 7e-48, Method: Composition-based stats.
Identities = 86/139 (61%), Positives = 108/139 (77%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+LQ+ TP I++FN IL LVK HY AISL Q+EF GI P IVTL IL+NCYCH G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
++ FS+L KILK GY+PN+ITFTTLIKG+CLN Q AL FHD ++A G +L+QVSY I
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 162 LINGLCKVGQTRAALRLLR 180
L+NGLCK+G+TRAA+++LR
Sbjct: 121 LMNGLCKMGETRAAMQMLR 139
Score = 92.4 bits (228), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 83/143 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ +FN ++Q P++ +N I+ L K K A++L +M ++ I PD+VT NIL
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S + ++ ++ G + IT+ +L+ LC N + +A+ E+ QGI
Sbjct: 294 IDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGI 353
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y LI+GLCK G+ A
Sbjct: 354 QPNVCTYTTLIDGLCKDGRLEDA 376
Score = 87.8 bits (216), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 77/130 (59%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ ++ I+ L K K + A L +M +GI P++ T +IL++ C + A ++LA
Sbjct: 147 VVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
++K+G KPN +T+ ++ G CL +QV +AL + ++ +G++ N Y I+INGLCK
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKK 266
Query: 171 QTRAALRLLR 180
+ A+ L +
Sbjct: 267 RVDEAMNLFK 276
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 82/146 (56%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ P++ F+ ++ L K + A++L M +G+ P++VT ++
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + Q++ A ++ +++ G +PN + +I GLC +V A+ E+ + I
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKIN 284
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ILI+GLCK+G+ +L L+
Sbjct: 285 PDVVTYNILIDGLCKLGKISTSLELV 310
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + + T II +N +L L K H AI+L +++ +GI P++ T LI+ C
Sbjct: 309 LVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLC 368
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A+ + +IL GY T+ +I GLC AL + + V
Sbjct: 369 KDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAV 428
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY +I L + G+T +LL
Sbjct: 429 SYETIIYALSEKGETVKTNKLL 450
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 75/146 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L +++ P+++ + I+ + A+++ + M G+ P++ NI+IN
Sbjct: 201 AMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIIN 260
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ A ++ ++ + P+ +T+ LI GLC ++ +L+ DE+ + G +
Sbjct: 261 GLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV 320
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y L++ LCK A+ L++
Sbjct: 321 DIITYNSLLHALCKNHHLDQAITLVK 346
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 32/174 (18%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ ++L+M + P+ I F ++ + A+ + G D V+ IL+N C
Sbjct: 67 ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126
Query: 98 HLGQMSVAFSVLAK--------------------------------ILKRGYKPNTITFT 125
+G+ A +L K ++ +G PN TF+
Sbjct: 127 KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L+ LC + + K+A+ ++ +G++ N V+YG +++G C V Q AL +
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 186 bits (473), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 7/175 (4%)
Query: 12 NPTFLLAMP-----FSSLHSHSRSLPNDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTK 65
NP F+ P +S LH H N+ + FN LL ++ TP II+FNKIL+ LVK K
Sbjct: 26 NPNFIGLFPSSISLYSQLHHHQDE-ENNLISSFNSLLHHKNPTPPIIQFNKILSSLVKAK 84
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
H+S A+SL QME GI+ D T NILINC+ LG S++FSV KILK+G+ PN ITF
Sbjct: 85 HHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFN 144
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TLIKGLCL + +AL FHD+++AQG L+QVSYG LINGLCKVG+ AAL+LL+
Sbjct: 145 TLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLK 199
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 82/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF + + P+++ +N ++ L K S + L +M RG P+I+T N +
Sbjct: 367 DEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSI 426
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L + +G +P+ T+T LIKGLC + +++ A + ++LL +G
Sbjct: 427 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY 486
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y ++I G C G AAL LL
Sbjct: 487 NLDVYTYTVMIQGFCVKGLFDAALALL 513
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +F+ + ++ + ++ L K K A++L +M R I+P++VT N L
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ LG++S ++ ++ RG PN IT+ +++ LC N V +A+ L QGI
Sbjct: 392 IDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI 451
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +Y +LI GLC+ G+ A ++
Sbjct: 452 RPDMYTYTVLIKGLCQSGKLEDAQKVFE 479
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L+++++ R +P N ++ A+ L H+M I P + T +
Sbjct: 225 LVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFS 284
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A +L +K+ + +T+ +L+ G CL ++ +A D + ++
Sbjct: 285 ILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASR 344
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY +INGLCK+ A+ L
Sbjct: 345 GVIANVQSYTTMINGLCKIKMVDEAVNLFE 374
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+II +N IL L K H AI+L ++ +GI PD+ T +LI C G++ A V
Sbjct: 418 PNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKV 477
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY + T+T +I+G C+ AL ++ G N +Y I+I L +
Sbjct: 478 FEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFE 537
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 538 KDENDMAEKLLR 549
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + +N I+ + K K + A L QM + I PD T N LI +C +GQ+ A +
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGL 267
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L K++ P TF+ L+ C +VK A + + I L+ V+Y L++G C
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327
Query: 169 VGQTRAA 175
V + A
Sbjct: 328 VKEINKA 334
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV L ++++ P + F+ ++ K A + + I+ D+VT N L+
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A + + RG N ++TT+I GLC V A+ +E+ + I
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GL K+G+ L+L+
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLV 408
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 67/128 (52%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K + A+ L +++ + + P+ V N++I+ C ++ AF + ++
Sbjct: 176 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 235
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ T +LI G C+ Q+K A+ +++ + I ++ IL++ CK G+
Sbjct: 236 MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGK 295
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 296 VKEAKMML 303
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N ++ K + A + M RG++ ++ + +IN C + + A ++
Sbjct: 314 DVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLF 373
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++ R PN +T+ +LI GL ++ L+ DE+ +G N ++Y +++ LCK
Sbjct: 374 EEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKN 433
Query: 170 GQTRAALRLL 179
A+ LL
Sbjct: 434 HHVDKAIALL 443
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 124/175 (70%), Gaps = 7/175 (4%)
Query: 12 NPTFLLAMPFSSLHSHSRSLP-----NDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTK 65
NP FL+ F+S S S S ++ V FN LL ++ TPSII+F KIL LVK
Sbjct: 25 NPIFLIHC-FTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKAN 83
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
HYSI +SL QMEF GI ++VTL+ILINC+ LG S++FSV + ILK+GY+P+ IT T
Sbjct: 84 HYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLT 143
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TLIKGLCL + +AL FHD++LA G QLNQVSY LINGLCKVGQT+AAL +LR
Sbjct: 144 TLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLR 198
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q+ P + ++ +++ K K A+ L +M + I PD+VT N L
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSL 390
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG PN IT+ +L+ LC N V +A++ +L I
Sbjct: 391 IDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNI 450
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y ILINGLCK G+ + A ++
Sbjct: 451 QPSVCTYNILINGLCKSGRLKDAQKVFE 478
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA ++ ++ R P+++ +N ++ L AI L H+M I P + T +
Sbjct: 224 LVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFS 283
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A +V ++K+ KPN +T+ +L+ G CL ++V +A + +
Sbjct: 284 ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+I+G CK+ A++L
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFE 373
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P ++ +N ++ L K+ S A+ L +M RG P+I+T N L
Sbjct: 366 DEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSL 425
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A +L K+ +P+ T+ LI GLC + ++K A + +++L G
Sbjct: 426 LDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485
Query: 153 QLNQVSYGILINGLCKVG 170
++ +Y +I G CK G
Sbjct: 486 NIDVYTYNTMIKGFCKKG 503
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N I+ + K K + A +M + I P +VT N LI C +GQ+ A +L
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLL 267
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K++ P TF+ L+ C +VK A ++ + ++ N V+Y L+NG C V
Sbjct: 268 HKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV 327
Query: 170 GQTRAA 175
+ A
Sbjct: 328 NEVNKA 333
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F +++ P+I+ +N ++ + A S+ + M G+ PD+ + +I+I
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C + + A + ++ + P+ +T+ +LI GLC + ++ AL+ E+ +G
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y L++ LCK A+ LL
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELL 442
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 70/136 (51%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+++L + + + + ++ L K A+ + +++ + + D+V N +I+ C
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ AF ++++ + P +T+ TLI GLC+ Q+K A+ +++ + I ++
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282
Query: 160 GILINGLCKVGQTRAA 175
IL++ CK G+ + A
Sbjct: 283 SILVDAFCKEGKVKEA 298
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 116/161 (72%), Gaps = 21/161 (13%)
Query: 26 SHSRSLPN-----DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEF 79
SH RS+PN +AV FNR+LQMRHTPSI+EFNKILT L+KTK HY +SLS QME
Sbjct: 140 SHFRSIPNGFVVDNAVLSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMES 199
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G+ PD+ TL+ILINCY K GY+PNTIT TTLIKGLCLN +V
Sbjct: 200 KGVKPDLFTLSILINCY---------------YFKMGYEPNTITLTTLIKGLCLNGKVNE 244
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
AL FHD +LA G LN V+YGILINGLCK+GQTRAAL++LR
Sbjct: 245 ALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLR 285
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
N +M P+ + +N ++ K+ S A L QM RG P+++T N L++ C
Sbjct: 383 LNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCK 442
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+ A +++ +G +P+ T+ TL+ GLC ++K A +LL +G L +
Sbjct: 443 NHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWT 502
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y I+INGLC G A LL
Sbjct: 503 YNIMINGLCLEGLLDEAETLL 523
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 22/154 (14%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ R P+++ F A SL H+M + I P++ T NIL+
Sbjct: 314 DAYGLYSEMIVKRIPPTVVTFK--------------AFSLFHEMVLKNINPNVYTFNILV 359
Query: 94 NCYCHLGQMSVAFSVLAKILKRGY--------KPNTITFTTLIKGLCLNDQVKRALQFHD 145
+ C G++ A +V+ K++ KPNT+++ TLI G C + ++ A + D
Sbjct: 360 DALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLD 419
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ +G N ++Y L++ LCK A+ L+
Sbjct: 420 QMRDRGQPPNVITYNSLLHALCKNHHVDKAIALV 453
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 42 LLQMR---HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
L QMR P++I +N +L L K H AI+L + + +GI PD+ T N L++ C
Sbjct: 418 LDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCK 477
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G++ A + +L +GY T T+ +I GLCL + A ++ G + V+
Sbjct: 478 QGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVT 537
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y +I+ L + + A +L+R
Sbjct: 538 YQTIIHALFEKDENDKAEKLVR 559
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/139 (65%), Positives = 109/139 (78%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L+MR P II+F KIL LVKTKHY I I L +ME GI + +TLNILIN YCHL Q
Sbjct: 1 MLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQ 60
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
++ AFSV AKILK GY+P+ IT+TTLI+GLCLN QVK +L FHD L++QGI+L+ VSYG
Sbjct: 61 INSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGT 120
Query: 162 LINGLCKVGQTRAALRLLR 180
LINGLCK+GQT ALRLLR
Sbjct: 121 LINGLCKIGQTGPALRLLR 139
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+FN + QM T + ++ +++ L K K A+ L M ++PD+V + LI+ C
Sbjct: 277 VFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLC 336
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+++ A + ++ RG PN IT+T+LI LC + QV +A+ ++ QGIQ N
Sbjct: 337 KSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMY 396
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y IL++GLCK G+ A ++ +
Sbjct: 397 TYNILVDGLCKDGRLTDAQKVFQ 419
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P ++ ++ ++ L K+ + A+ +M RG P+++T L
Sbjct: 307 DEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSL 366
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C Q+ A ++L KI +G + N T+ L+ GLC + ++ A + +LL +G
Sbjct: 367 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 426
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
++ V+Y I+INGLCK AL LL
Sbjct: 427 NVDVVTYSIMINGLCKESLFDEALTLL 453
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ H R + N A +F ++L++ + P II + ++ L +++ ++ +GI
Sbjct: 55 YCHLRQI-NSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 113
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D V+ LIN C +GQ A +L KI +P+ + + T+I GLC + V+ A +
Sbjct: 114 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 173
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ + + N V+Y LI G C VGQ A LL
Sbjct: 174 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 208
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N I+ L K K A L +M + + P++VT LI +C +GQ+ AF +
Sbjct: 148 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 207
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++ + PN TF TL+ GLC +++ A ++ +G+ + +Y L++G
Sbjct: 208 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 267
Query: 169 VGQTRAA 175
V + A
Sbjct: 268 VKEAGKA 274
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L ++E PD+V N +I+ C + AF + +
Sbjct: 116 VSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCE 175
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ ++ PN +T+T+LI G C+ Q+ +A +E++ + + N ++ L++GLCK G+
Sbjct: 176 MFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK 235
Query: 172 TRAALRLL 179
R A L+
Sbjct: 236 MREAKSLV 243
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L DA L+ + + R P+++ + ++ A L ++M + + P++ T N
Sbjct: 165 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 224
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ C G+M A S++A ++K G P+ T+ L+ G L + +A + +
Sbjct: 225 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 284
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY ++I+GL K+ A+ L
Sbjct: 285 GVTCDVHSYSVMISGLSKMKMLDEAMDLFE 314
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ + + P++I + ++ L K+ AI+L +++ +GI ++ T NIL
Sbjct: 342 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 401
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G+++ A V +L +G+ + +T++ +I GLC AL ++ +G
Sbjct: 402 VDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGC 461
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y +IN + A +LLR
Sbjct: 462 VPDAIAYETIINAFFEKDMNDKAEKLLR 489
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A L N ++ P++ FN ++ L K A SL M G+ PD+ T N L
Sbjct: 202 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 261
Query: 93 INCY----------------------CHLGQMSVAFSVLAKI--------LKRGYK---- 118
++ Y C + SV S L+K+ L G +
Sbjct: 262 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 321
Query: 119 -PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
P+ + +++LI GLC + ++ AL++ DE+ +G N ++Y LI+ LCK Q A+
Sbjct: 322 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 381
Query: 178 LLR 180
LL+
Sbjct: 382 LLK 384
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 7/175 (4%)
Query: 10 HRNPTFLLAMP----FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK 65
H NP FL +S +H + V FN +L P I F +L LVK
Sbjct: 23 HLNPRFLCCFQNPRFYSQIHEQDE---HSLVSSFNHMLHQNPIPPIFHFGVMLGSLVKAN 79
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
HY+ A+SL +ME G+ +++T++ILINC+CHLGQ ++FSV AKILK GY+PN I T
Sbjct: 80 HYTTAVSLHRKMELNGVASNLITMSILINCFCHLGQNPLSFSVFAKILKMGYEPNVIILT 139
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+IKGLCL +V+ AL FHD+++AQG QLNQVSYG LINGLCKVG+TRAAL LLR
Sbjct: 140 TIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCKVGETRAALELLR 194
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 84/150 (56%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R P ++ +N +++ AI L H+M I P++ T++
Sbjct: 220 LVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMS 279
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G+ A +V+A ++K G KPN +T+ +LI G CL QV +A + + +
Sbjct: 280 ILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQR 339
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ A+ L +
Sbjct: 340 GVIADVQSYSIMINGFCKIKMVDEAIDLFK 369
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + N + Q + ++ ++ K K AI L +M+ R ++PD +T + L
Sbjct: 327 NKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSL 386
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ +++++ RG +PN IT+ +L+ LC N V +A+ + QGI
Sbjct: 387 IDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGI 446
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q +Y ILI GLC G+ + A
Sbjct: 447 QPTLCTYTILIKGLCMSGRLKDA 469
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P I ++ ++ L K+ S A L +M RG P+I+T N L
Sbjct: 362 DEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSL 421
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C + A ++L K +G +P T+T LIKGLC++ ++K A +LL +G
Sbjct: 422 LNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGY 481
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y +I G C G AL LL
Sbjct: 482 NLDVYTYTAMIRGFCYEGLFDEALALL 508
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 80/149 (53%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A + L++ P+++ +N ++ K + A + + M RG++ D+ + +I
Sbjct: 291 PKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSI 350
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN +C + + A + ++ R P+TIT+++LI GLC + ++ A + E+ +G
Sbjct: 351 MINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRG 410
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N ++Y L+N LC+ A+ LLR
Sbjct: 411 QQPNIITYNSLLNALCQNHHVDKAIALLR 439
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++L+M + P++I I+ L A+ ++ +G + V+ LIN C
Sbjct: 122 VFAKILKMGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLC 181
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+ A +L ++ + +PN + +T +I G+C + V A + E++A+ I + V
Sbjct: 182 KVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVV 241
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI+G C VGQ + A+ LL
Sbjct: 242 TYNNLISGFCVVGQLKDAIGLL 263
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + + P+II +N +L L + H AI+L + + +GI P + T IL
Sbjct: 397 SDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTIL 456
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ A V +L +GY + T+T +I+G C AL ++ G
Sbjct: 457 IKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGC 516
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y I+I L K + A +LLR
Sbjct: 517 MPNAKTYEIIILSLFKKDENDMAEKLLR 544
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + P++V ++I+ C ++ AF++ ++
Sbjct: 171 VSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSE 230
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +T+ LI G C+ Q+K A+ +++ + I N + IL++ CK G+
Sbjct: 231 MIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGK 290
Query: 172 TRAA 175
+ A
Sbjct: 291 PKEA 294
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 114/148 (77%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LFN L+ M+ PS+I+FN I+ +VK KH +AISL QM F+G+ P I TL+I
Sbjct: 39 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 98
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCYCHLG+M AFSVL +LKRGY+PN IT TT++KGLC+N +V++A+ FHD + AQG+
Sbjct: 99 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 158
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L++V YG LINGLCK+G++ A +LL+
Sbjct: 159 LLDEVCYGTLINGLCKIGRSIDAFQLLQ 186
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ M P I+ + ++ +T + L +M + I P++ T N+LI+ +C
Sbjct: 219 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 278
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A + ++KRG +P+ +TF TLI G CL+ V A + D + +GI +
Sbjct: 279 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 338
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY ILI G CK + A+ L
Sbjct: 339 SYTILIIGYCKCKRIDEAVSLF 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P + + ++ K K A+SL ++M + ++ DIV + LI+ C
Sbjct: 324 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 383
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++S A+ + + I G PN IT+ LI C + ++ + +G+ +
Sbjct: 384 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 443
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ILING CK + R A+ LL
Sbjct: 444 TYNILINGYCKSKRIREAMNLL 465
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LFN + I+ ++ ++ L K+ S A L + G P+++T NIL
Sbjct: 354 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 413
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + + + + + +G P +T+ LI G C + +++ A+ + ++ +
Sbjct: 414 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 473
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y L +GLCK G+ A L +
Sbjct: 474 APDSITYNSLFDGLCKSGRISDAWELFK 501
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ FN ++ + A + + M RG PDIVT N LI+ +C G + A +
Sbjct: 265 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 324
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +RG P+ ++T LI G C ++ A+ +E+ + + L+ V Y LI+GLCK
Sbjct: 325 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 384
Query: 169 VGQTRAALRLL 179
G+ A L
Sbjct: 385 SGRISYAWELF 395
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + P++I +N ++ K + + I L M +G+ P ++T NILIN YC
Sbjct: 394 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 453
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A ++L+ + + P++IT+ +L GLC + ++ A + + G ++
Sbjct: 454 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 513
Query: 158 SYGILINGLCK 168
+Y +L++ CK
Sbjct: 514 TYNVLLDAFCK 524
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +++ P I+ FN +++ + A L + RGI+PD+ + ILI
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 344
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC ++ A S+ ++ + + + +++LI GLC + ++ A + + G
Sbjct: 345 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 404
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y ILI+ CK+ + L +
Sbjct: 405 PNVITYNILIDAFCKIQDIDMGIELFK 431
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A L +ME + + P+IV N++I+ +C A + KI+
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P+ +T+T+LI+G C Q Q E++ + I N ++ +LI+ C+ G+
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 174 AA 175
A
Sbjct: 285 EA 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + P+I+ +N I+ K + A L ++ GI PDI+T LI
Sbjct: 180 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 239
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C GQ ++ +++ + PN TF LI C ++ A + ++ +G Q
Sbjct: 240 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 299
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI+G C G A +L
Sbjct: 300 PDIVTFNTLISGHCLHGNVLEARKLF 325
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L+ + P+ I ++ L A+ + +G++ D V LIN C +G+
Sbjct: 118 VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGR 177
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
AF +L ++ + KPN + + +I C ++ +A + +++ GI + ++Y
Sbjct: 178 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 237
Query: 162 LINGLCKVGQTRAALRLL 179
LI G C+ GQ +L+
Sbjct: 238 LIRGFCRTGQWGEVKQLM 255
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 114/148 (77%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LFN L+ M+ PS+I+FN I+ +VK KH +AISL QM F+G+ P I TL+I
Sbjct: 39 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 98
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCYCHLG+M AFSVL +LKRGY+PN IT TT++KGLC+N +V++A+ FHD + AQG+
Sbjct: 99 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 158
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L++V YG LINGLCK+G++ A +LL+
Sbjct: 159 LLDEVCYGTLINGLCKIGRSIDAFQLLQ 186
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ M P I+ + ++ +T + L +M + I P++ T N+LI+ +C
Sbjct: 219 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 278
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A + ++KRG +P+ +TF TLI G CL+ V A + D + +GI +
Sbjct: 279 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 338
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY ILI G CK + A+ L
Sbjct: 339 SYTILIIGYCKCKRIDEAVSLF 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P + + ++ K K A+SL ++M + ++ DIV + LI+ C
Sbjct: 324 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 383
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++S A+ + + I G PN IT+ LI C + ++ + +G+ +
Sbjct: 384 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 443
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ILING CK + R A+ LL
Sbjct: 444 TYNILINGYCKSKRIREAMNLL 465
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LFN + I+ ++ ++ L K+ S A L + G P+++T NIL
Sbjct: 354 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 413
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + + + + + +G P +T+ LI G C + +++ A+ + ++ +
Sbjct: 414 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 473
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y L +GLCK G+ A L +
Sbjct: 474 APDSITYNSLFDGLCKSGRISDAWELFK 501
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ FN ++ + A + + M RG PDIVT N LI+ +C G + A +
Sbjct: 265 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 324
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +RG P+ ++T LI G C ++ A+ +E+ + + L+ V Y LI+GLCK
Sbjct: 325 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 384
Query: 169 VGQTRAALRLL 179
G+ A L
Sbjct: 385 SGRISYAWELF 395
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + P++I +N ++ K + + I L M +G+ P ++T NILIN YC
Sbjct: 394 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 453
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A ++L+ + + P++IT+ +L GLC + ++ A + + G ++
Sbjct: 454 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 513
Query: 158 SYGILINGLCK 168
+Y +L++ CK
Sbjct: 514 TYNVLLDAFCK 524
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +++ P I+ FN +++ + A L + RGI+PD+ + ILI
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 344
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC ++ A S+ ++ + + + +++LI GLC + ++ A + + G
Sbjct: 345 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 404
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y ILI+ CK+ + L +
Sbjct: 405 PNVITYNILIDAFCKIQDIDMGIELFK 431
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A L +ME + + P+IV N++I+ +C A + KI+
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P+ +T+T+LI+G C Q Q E++ + I N ++ +LI+ C+ G+
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 174 AA 175
A
Sbjct: 285 EA 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + P+I+ +N I+ K + A L ++ GI PDI+T LI
Sbjct: 180 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 239
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C GQ ++ +++ + PN TF LI C ++ A + ++ +G Q
Sbjct: 240 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 299
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI+G C G A +L
Sbjct: 300 PDIVTFNTLISGHCLHGNVLEARKLF 325
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L+ + P+ I ++ L A+ + +G++ D V LIN C +G+
Sbjct: 118 VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGR 177
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
AF +L ++ + KPN + + +I C ++ +A + +++ GI + ++Y
Sbjct: 178 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 237
Query: 162 LINGLCKVGQTRAALRLL 179
LI G C+ GQ +L+
Sbjct: 238 LIRGFCRTGQWGEVKQLM 255
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 125/191 (65%), Gaps = 12/191 (6%)
Query: 1 MSVLRYRW-----FHRNPTFLLAMP-----FSSLHSHSRSLPNDAVCLFNRLLQMRH-TP 49
MS +R+ F NP F+ P FS LH H + N+ + FN LL ++ TP
Sbjct: 1 MSFSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLH-HKQDEENNLISSFNHLLLHKNPTP 59
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+FNKIL+ LVK KH+S A+SL QME GI D T NILINC+ LG S++FS+
Sbjct: 60 PTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIF 119
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
AKILK+GY P ITF TLIKGLCL + +AL FHD+++AQG L+QVSYG LINGLCKV
Sbjct: 120 AKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKV 179
Query: 170 GQTRAALRLLR 180
G+ AAL+LL+
Sbjct: 180 GRITAALQLLK 190
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 82/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L+++++ R P + +N +++ + AI L ++M+ I P++ T N
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFN 275
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G+++ A VLA ++K KP+ +T+ +L+ G C ++V +A D + +
Sbjct: 276 ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N Y ++NG CK+ A+ L
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFE 365
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P+++ ++ ++ L K A+ L +M RG P+IVT + +
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L + +G +P+ T+T LIKGLC + +++ A ++LL +G
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y ++I G C G AL LL
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALL 504
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH------TPSIIEFNKILTPLV----KTKHYSIAISLSHQMEFRGIM 83
D C N++ + + + +I +I T +V K K AI+L +M R I+
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++VT + LI+ C LG++ A ++ ++ RG PN +T+++++ LC N V +A+
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
L QGI+ + +Y ILI GLC+ G+ A
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P+I+ ++ IL L K H AI+L ++ +GI PD+ T ILI
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A +V +L +GY + +T +I+G C +AL ++ G
Sbjct: 455 GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIP 514
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N +Y ++I L + + A +LLR
Sbjct: 515 NAKTYELVILSLFEKDENDTAEKLLR 540
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA + +++ P ++ +N ++ + A + M G++ ++ +
Sbjct: 288 NDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTM 347
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N +C + + A ++ ++ R PN +T+++LI GLC ++ AL+ DE+ +G
Sbjct: 348 VNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ 407
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y +++ LCK A+ LL
Sbjct: 408 PPNIVTYSSILDALCKNHHVDKAIALL 434
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++L+ + P+ I FN ++ L H A+ ++ +G D V+ LIN C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+++ A +L ++ + +PN + + +I +C V A + +++A+ I +
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y LI+G V + A+ L
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFN 260
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 63/124 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K + A+ L +++ + + P+ V N++I+ C ++ AF + ++
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ T+ LI G ++ A+ +++ + I N ++ IL++G CK G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286
Query: 172 TRAA 175
A
Sbjct: 287 VNDA 290
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 125/191 (65%), Gaps = 12/191 (6%)
Query: 1 MSVLRYRW-----FHRNPTFLLAMP-----FSSLHSHSRSLPNDAVCLFNRLLQMRH-TP 49
MS +R+ F NP F+ P FS LH H + N+ + FN LL ++ TP
Sbjct: 1 MSFSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLH-HKQDEENNLISSFNHLLLHKNPTP 59
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+FNKIL+ LVK KH+S A+SL QME GI D T NILINC+ LG S++FS+
Sbjct: 60 PTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIF 119
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
AKILK+GY P ITF TLIKGLCL + +AL FHD+++AQG L+QVSYG LINGLCKV
Sbjct: 120 AKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKV 179
Query: 170 GQTRAALRLLR 180
G+ AAL+LL+
Sbjct: 180 GRITAALQLLK 190
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 82/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L+++++ R P + +N +++ + AI L ++M+ I P++ T N
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFN 275
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G+++ A VLA ++K KP+ +T+ +L+ G C ++V +A D + +
Sbjct: 276 ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N Y ++NG CK+ A+ L
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFE 365
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P+++ ++ ++ L K A+ L +M RG P+IVT + +
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L + +G +P+ T+T LIKGLC + +++ A ++LL +G
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y ++I G C G AL LL
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALL 504
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRH------TPSIIEFNKILTPLV----KTKHYSIAISLSHQMEFRGIM 83
D C N++ + + + +I +I T +V K K AI+L +M R I+
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++VT + LI+ C LG++ A ++ ++ RG PN +T+++++ LC N V +A+
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
L QGI+ + +Y ILI GLC+ G+ A
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P+I+ ++ IL L K H AI+L ++ +GI PD+ T ILI
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A +V +L +GY + +T +I+G C +AL ++ G
Sbjct: 455 GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIP 514
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N +Y ++I L + + A +LLR
Sbjct: 515 NAKTYELVILSLFEKDENDTAEKLLR 540
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA + +++ P ++ +N ++ + A + M G++ ++ +
Sbjct: 288 NDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTM 347
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N +C + + A ++ ++ R PN +T+++LI GLC ++ AL+ DE+ +G
Sbjct: 348 VNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ 407
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y +++ LCK A+ LL
Sbjct: 408 PPNIVTYSSILDALCKNHHVDKAIALL 434
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++L+ + P+ I FN ++ L H A+ ++ +G D V+ LIN C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+++ A +L ++ + +PN + + +I +C V A + +++A+ I +
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y LI+G V + A+ L
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFN 260
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 63/124 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K + A+ L +++ + + P+ V N++I+ C ++ AF + ++
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQ 226
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ T+ LI G ++ A+ +++ + I N ++ IL++G CK G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286
Query: 172 TRAA 175
A
Sbjct: 287 VNDA 290
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 183 bits (465), Expect = 6e-47, Method: Composition-based stats.
Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 1/144 (0%)
Query: 38 LFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
LFNRLL + P IEF KIL L+K K Y A+SLS QMEF GI PD +T N+L+NC+
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
LG + +FSV AKILK+GY P+ +TFT LIKGLCL +V +AL FHD+++AQG QL+Q
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 157 VSYGILINGLCKVGQTRAALRLLR 180
VSYG LINGLC+VG+T+AA++LLR
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLR 187
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 81/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN + Q TP + ++ ++ K K A+ L +M + I P++VT N L
Sbjct: 320 NKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSL 379
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G+ S A ++ ++ RG N IT+ +++ +C N+ V +A+ ++ +GI
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q + +Y +LINGLCKVG+ A ++
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVF 466
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 83/149 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L+ ++ R +P ++ ++ +++ A+ L ++M I P++ T +
Sbjct: 213 LVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFS 272
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI+ +C G++ A +VLA ++K+ K + +T+ +L+ G CL QV +A + + +
Sbjct: 273 ILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR 332
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G+ + SY I+ING CK+ A++L
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLF 361
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 46 RHTPS-IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSV 104
R PS II +N IL + K H AI L +++ +GI PDI T +LIN C +G++
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A V +L +GY PN T+T+LI G C L ++ G N ++Y ILI+
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521
Query: 165 GLCKVGQTRAALRLLR 180
L + + A +LLR
Sbjct: 522 SLFEKDENDKAEKLLR 537
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P+++ +N ++ L K+ S A+ L +M RG +I+T N +
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A +L KI ++G +P+ T+T LI GLC ++ A + ++LL +G
Sbjct: 415 LDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGY 474
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N +Y LING C G L +L
Sbjct: 475 SPNIYTYTSLINGFCNKGFFDEGLAML 501
Score = 77.4 bits (189), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 79/145 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV LFNR++ P++ F+ ++ K A ++ M + + D+VT N L++
Sbjct: 252 AVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMD 311
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC + Q++ A S+ + +RG P+ +++ +I G C V A++ +E+ + I
Sbjct: 312 GYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFP 371
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y L++GLCK G+T AL L+
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELV 396
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV L R+ P+++ ++ I+ + K K + A L +M + I PD+VT + LI+
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLIS 241
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C +G++ A + +++ PN TF+ LI G C +V+ A ++ + ++L
Sbjct: 242 GFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y L++G C V Q A L
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLF 326
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 69/129 (53%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ +N ++ K + A SL + M RG+ PD+ + +I+IN +C + + A +
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE 362
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
++ + PN +T+ +L+ GLC + + AL+ DE+ +G N ++Y +++ +CK
Sbjct: 363 EMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNN 422
Query: 171 QTRAALRLL 179
A+ LL
Sbjct: 423 HVDKAIVLL 431
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++L+ + P + F ++ L A+ ++ +G D V+ LIN C
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+ A +L ++ + +PN + ++T+I +C + V A + E++++ I + V
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI+G C VG+ + A+ L
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLF 256
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 70/128 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L + A+ L +++ + + P++V + +I+ C ++ AF + +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ +T+++LI G C+ ++K A+ + +++ I N ++ ILI+G CK G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 172 TRAALRLL 179
R A +L
Sbjct: 284 VREAKNVL 291
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 111/141 (78%), Gaps = 2/141 (1%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTK--HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+L+M TPSI+EFNKIL +VK+ HY+ AISL HQ+E I P IVTLNILINCY HL
Sbjct: 1 MLRMNPTPSIVEFNKILGSIVKSNNNHYTTAISLFHQLELNRITPTIVTLNILINCYGHL 60
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
G+++ AFS+ AKILK GY P TITF+TLI G+CL ++K AL FHD+++ G L+QVSY
Sbjct: 61 GEITFAFSIFAKILKLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSY 120
Query: 160 GILINGLCKVGQTRAALRLLR 180
G LI+GLCK+G+TRAAL++LR
Sbjct: 121 GALISGLCKIGETRAALKMLR 141
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
L +A L+++++ + +P+++ + ++ A L H+M + I P+I T
Sbjct: 165 EKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYT 224
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
ILI+ C G++ A +V+A ++K G +P +T+ TL+ G CL+++V +A + +
Sbjct: 225 FTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIG 284
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + N SY I+INGLCK+ AL +
Sbjct: 285 KRRMTPNVHSYTIIINGLCKIKMVDEALNFFK 316
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + + R TP++ + I+ L K K A++ +M P+ VT + L
Sbjct: 274 NKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCE---PNTVTYSSL 330
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ +L ++ RG N IT+ +L+ LC N QV +A+ ++ QGI
Sbjct: 331 IDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGI 390
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y ILI+GLCK G+ A
Sbjct: 391 QPNINTYNILIDGLCKEGRLENA 413
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNR-------LLQM--RHTPS-IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C R L QM R P+ II +N +L L K AI+L +++ +GI
Sbjct: 332 DALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQ 391
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+I T NILI+ C G++ A + +L +GYK T+ T+I GLCL A+
Sbjct: 392 PNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTL 451
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++ G + V+Y +I L K + A +LLR
Sbjct: 452 LEKMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLR 488
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ +N I+ L K K + A L QM + I P++VTL+ LI +C +GQ+ AF +
Sbjct: 151 NVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLF 210
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++L + PN TFT LI LC ++K A ++ +G++ V+Y L++G C
Sbjct: 211 HEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLD 270
Query: 170 GQTRAA 175
+ A
Sbjct: 271 NEVNKA 276
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
N +M P+ + ++ ++ L K+ S A L QM RG +I+T N L++ C
Sbjct: 312 LNFFKEMHCEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCK 371
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
Q+ A +++ KI +G +PN T+ LI GLC +++ A +LL +G ++ +
Sbjct: 372 NHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWT 431
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y +INGLC G A+ LL
Sbjct: 432 YNTMINGLCLEGLFDEAMTLLE 453
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ +L P+I F ++ L K A ++ M G+ P +VT N L+
Sbjct: 205 EAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 264
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC +++ A +V I KR PN ++T +I GLC V AL F E+ +
Sbjct: 265 DGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEP-- 322
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ LCK G+ A LL
Sbjct: 323 -NTVTYSSLIDALCKSGRISHAWELL 347
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + +++ L K A+ + Q+E + + ++V NI+I+ C ++ A+ + ++
Sbjct: 118 VSYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQ 177
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + PN +T ++LI G C+ Q+K A E+L + I N ++ ILI+ LCK G+
Sbjct: 178 MILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGK 237
Query: 172 TRAA 175
+ A
Sbjct: 238 IKEA 241
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F ++L++ + P+ I F+ ++ + A+ + G D V+ LI+
Sbjct: 66 AFSIFAKILKLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALIS 125
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L +I + N + + +I LC V A + + +++ + I
Sbjct: 126 GLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISP 185
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+ LI G C VGQ + A L
Sbjct: 186 NVVTLSSLIYGFCIVGQLKEAFGLF 210
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 180 bits (457), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 110/148 (74%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV +FN LL TP I+ KIL+ LVK+KHY +SLS +MEF GI D+V +IL
Sbjct: 48 DNAVSMFNHLLHKNTTPPDIKLGKILSSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSIL 107
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C LG AFSVLAKILK GY+P+TITFTTLIKGLCL + +AL FHD+++A G
Sbjct: 108 INSFCQLGHNPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGF 167
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L++V YG LINGLCKVG+T+AAL LLR
Sbjct: 168 HLDKVGYGTLINGLCKVGETKAALELLR 195
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 179 bits (455), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 10/178 (5%)
Query: 12 NPTFLL--------AMPFSSLHSHSRSLPNDAVCLFNRLLQMRH-TPSIIEFNKILTPLV 62
NP FL+ + +S H + N + FNRLL ++ TP II+FNKIL+ LV
Sbjct: 21 NPNFLIRCFTTSSSSRLYSQFHEDYNNKHN-LISSFNRLLHHKNPTPHIIQFNKILSSLV 79
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K Y +SL QME GI D+VT +ILIN +C LG + AFSVLAKILK GY+P+TI
Sbjct: 80 KLNQYPTVVSLHPQMELNGIASDLVTCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTI 139
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TFTTLIKGLCL + +AL FHD+++A G L+QVSYG LINGLCKVG+T AAL LLR
Sbjct: 140 TFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETIAALELLR 197
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 24/156 (15%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF-- 106
P ++ +N I+ + K KH + A L +M + I P++VT + LI+ +C +G++ AF
Sbjct: 206 PDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDF 265
Query: 107 ----------------------SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+VLA ++K+G KP+ +T+++L+ G CL ++V +A
Sbjct: 266 FNKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIF 325
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +G+ N SY I+ING CK+ A++L +
Sbjct: 326 NTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFK 361
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P +I ++ ++ L K+ S A+ L QM RG+ P+IVT N +
Sbjct: 354 DEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSI 413
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K +G +P+ T+T LI GLC ++K A ++LL +G
Sbjct: 414 LDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLLVKGY 473
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ++I G C G +L LL
Sbjct: 474 NITVNTYTVMIQGFCSHGLLDESLALL 500
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + T + ++ ++ K K A+ L +M + I PD++T + L
Sbjct: 319 NKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSAL 378
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG PN +T+ +++ LC QV +A+ + QGI
Sbjct: 379 IDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGI 438
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y ILI+GLCK G+ + A +
Sbjct: 439 QPSVYTYTILIDGLCKGGRLKDARNIFE 466
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P+I+ +N IL L KT AI+L + + +GI P + T ILI+ C G++ A +
Sbjct: 404 APNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARN 463
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ +L +GY T+T +I+G C + + +L ++ G + V+Y I+I L
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIPDAVTYEIIICSLF 523
Query: 168 KVGQTRAALRLLR 180
+ A +LLR
Sbjct: 524 DKDKNDKAEKLLR 536
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 70/131 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ ++ ++ + A S+ + M RG+ + + +I+IN +C + + A +
Sbjct: 300 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKL 359
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + P+ IT++ LI GLC + ++ ALQ D++ +G+ N V+Y +++ LCK
Sbjct: 360 FKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCK 419
Query: 169 VGQTRAALRLL 179
Q A+ LL
Sbjct: 420 THQVDKAIALL 430
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + ++L+ + P I F ++ L A+ ++ G D V+ LIN
Sbjct: 122 AFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLIN 181
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A +L + + +P+ + + T+I G+C + V A + E++A+ I
Sbjct: 182 GLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISP 241
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+G C VG+ + A
Sbjct: 242 NVVTYSALISGFCIVGKLKDAFDFF 266
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
++++ M + + ++ L K A+ L + + + + PD+V N +I+ C
Sbjct: 162 DKVIAMGFHLDQVSYGTLINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKD 221
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ AF + ++++ + PN +T++ LI G C+ ++K A F ++++
Sbjct: 222 KHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKMIF---------- 271
Query: 160 GILINGLCKVGQTRAALRLL 179
IL++G CK G+ + A +L
Sbjct: 272 -ILVDGFCKEGRVKEAKNVL 290
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 120/176 (68%), Gaps = 24/176 (13%)
Query: 11 RNPTFLLAMPFSSLHSHSRSLPN-----DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK 65
R+P A P ++ S+PN +AV FNR+ Q+R TPSI+EFNKILT L+KTK
Sbjct: 25 RSPMPSSAEPLKTV----LSIPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTK 80
Query: 66 -HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
HY +SLS QME +G+ PD+ TL+ILINCYCHLGQM+ AFSV AKILK
Sbjct: 81 NHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKM--------- 131
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GLCLN +V AL FHD +LA G LN V+YGILINGLCK+GQTRAAL++LR
Sbjct: 132 -----GLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLR 182
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+CLF+ + P + +N ++ L K A L +M I DIVT N L
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + A +++ KI + G +PN T+ LI GLC Q+K A +LL +G
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY 469
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+N +Y I+INGLCK G A LL
Sbjct: 470 NVNAWTYNIMINGLCKEGLFDEAEVLL 496
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L DA L++ ++ R P+++ F+ ++ + A L ++M + I PD T N
Sbjct: 208 LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFN 267
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ C G++ A +V+A ++K G +P +T+ TL+ G CL ++V +A +
Sbjct: 268 ILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ N SY I+ING CK+ AL L
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLF 356
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 34 DAVCLFNRLLQMRHTPSIIE----------FNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +H SII +N ++ K K A+ L H+M RGI
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P VT N LI+ C G++ A+ ++ ++ + +T+ +LI C N V +A+
Sbjct: 366 PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIAL 425
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ GIQ N +Y ILI+GLCK GQ + A
Sbjct: 426 VKKIKEHGIQPNMCTYNILIDGLCKGGQLKNA 457
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
I+ +N ++ K +H AI+L +++ GI P++ T NILI+ C GQ+ A V
Sbjct: 402 DIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVF 461
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N T+ +I GLC A ++ GI + V+Y +I L
Sbjct: 462 QDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHK 521
Query: 170 GQTRAALRLLR 180
+ A +LLR
Sbjct: 522 DENEKAQKLLR 532
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ I+ L K K + A L +M + I P +VT + LI +C +G+ AF +
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ LC ++K A ++ +G++ V+Y L++G C V
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLV 311
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 312 NEVGKAKHVL 321
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 76/143 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ + +L + + + + ++ L K A+ + Q+E + + ++V + +
Sbjct: 140 NEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTI 199
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ A+ + ++++ + P +TF++LI G C+ + K A + +E++ + I
Sbjct: 200 IDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNI 259
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ ++ IL++ LCK G+ + A
Sbjct: 260 NPDAYTFNILVDALCKEGKIKEA 282
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LFN ++ P FN ++ L K A ++ M G+ P +VT N L+
Sbjct: 246 DAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305
Query: 94 NCYCHLGQMSVAFSVLAKILK-----------------------------------RGYK 118
+ YC + ++ A VL+ I + RG
Sbjct: 306 DGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+ +T+ +LI GLC ++ A + DE+ I + V+Y LI+ CK A+ L
Sbjct: 366 PHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIAL 425
Query: 179 LR 180
++
Sbjct: 426 VK 427
>Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0086:32654-31850 | 20130731
Length = 167
Score = 173 bits (438), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+L+MRHT +I+EF +IL+ +VKTK HY+ +SLS QMEF GI+PD++ LNI INCYCHL
Sbjct: 1 MLRMRHTTTIVEFTRILSSIVKTKNHYTTVLSLSRQMEFNGIIPDLLMLNISINCYCHLH 60
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
QM+ AFSV KI K GY P T+T TTLI GLCLN +V+ AL FHD ++A+G +LN+VSYG
Sbjct: 61 QMNFAFSVNTKIFKIGYLPTTVTLTTLINGLCLNGKVQEALNFHDHVIARGFRLNEVSYG 120
Query: 161 ILINGLCKVGQTRAALRLLR 180
LINGLCK+G+TRAAL++L+
Sbjct: 121 TLINGLCKMGETRAALQMLK 140
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 121/190 (63%), Gaps = 14/190 (7%)
Query: 2 SVLRYR---WFHRNPTFLLAMPFSSLHSHSRSLP-------NDAVCLFNRLLQMRHTPSI 51
S +RY +FH+N LL S +S S P +A LFNR+L M P I
Sbjct: 11 SFMRYVVPIFFHKN---LLPCFCCSFYSTSTLFPQIDNIDRENASSLFNRMLHMHPAPPI 67
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+FNKIL LVK+ HY + L +ME G+ P++VT NIL+NCY HLGQMS AFSVLA
Sbjct: 68 SQFNKILASLVKSNHYPTVVLLCRKMELNDGVKPNLVTFNILLNCYSHLGQMSFAFSVLA 127
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
KI+K GY P+ +TF TLI G CL + L+F+D+++ G QLNQ+SYG LIN LCK G
Sbjct: 128 KIIKIGYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGG 187
Query: 171 QTRAALRLLR 180
+TR AL+LLR
Sbjct: 188 ETREALQLLR 197
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N A L+ +L R +P++I +N +L L AISL M I P + T N
Sbjct: 223 LVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFN 282
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A VLA ++K G K N +T++TLI+G C+ ++K A+ ++++
Sbjct: 283 ILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILG 342
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
+ N ++ IL++ CK + A
Sbjct: 343 KVNPNVYTFTILVDAFCKEEKIDKA 367
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ + K K ++A L ++M + I P+++T N L++ C +GQ+ A S+
Sbjct: 206 PHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISL 265
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ P TF L+ G C +VK A ++ G++LN V+Y LI G C
Sbjct: 266 FKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCI 325
Query: 169 VGQTRAALRLL 179
VG+ + A+ L
Sbjct: 326 VGKLKEAVDLF 336
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A +F + Q T ++ + +++ K K A L +M+ + I PD+VT + L
Sbjct: 400 NEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSL 459
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C ++ A ++ ++ RG PN T+++++ L QV+ A++ E +GI
Sbjct: 460 VDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGI 519
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N +Y I I+GLCK G+ A +
Sbjct: 520 QPNVYTYTIFIDGLCKNGRLEDAWEVFE 547
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 75/138 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++++ + + I + ++ L K A+ L Q++ + + P +V N+LI+ C
Sbjct: 160 FYDKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMC 219
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++VAF + ++L + PN IT+ TL+ GLC+ Q+K A+ ++++ I
Sbjct: 220 KDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVY 279
Query: 158 SYGILINGLCKVGQTRAA 175
++ IL++G CK G+ + A
Sbjct: 280 TFNILVDGFCKEGKVKDA 297
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF + + P ++ ++ ++ L K++ A+ L +M RG P+I T + +
Sbjct: 435 DEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSI 494
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ Q+ A + + +G +PN T+T I GLC N +++ A + ++LL
Sbjct: 495 LDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSY 554
Query: 153 --QLNQVSYGILINGLCKVGQTRAALRLL 179
N+ ++ ++I+G C+ G AL LL
Sbjct: 555 NHNRNKYTWTVMIHGFCRKGLFDEALTLL 583
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 78/146 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LFN+++ + P++ F ++ K + A + + M + + P+++T + L+
Sbjct: 331 EAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLL 390
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC + +++ A + + +RG + +++T +I C V A + +E+ ++ I
Sbjct: 391 YGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIF 450
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y L++GLCK + AL+L+
Sbjct: 451 PDVVTYSSLVDGLCKSERIPNALKLV 476
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 75/143 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N +++ TP++I ++ +L + A + M RG+ D+++ I+I+ +C
Sbjct: 370 VLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFC 429
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + A + ++ + P+ +T+++L+ GLC ++++ AL+ DE+ +G N
Sbjct: 430 KIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIF 489
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +++ L K Q A+ L +
Sbjct: 490 TYSSILDALLKKHQVEEAIELFK 512
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S +PN A+ L + + P+I ++ IL L+K AI L + + +GI P++
Sbjct: 466 SERIPN-ALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVY 524
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYK--PNTITFTTLIKGLCLNDQVKRALQFHD 145
T I I+ C G++ A+ V +L Y N T+T +I G C AL
Sbjct: 525 TYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRKGLFDEALTLLS 584
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ + V+Y +I+ L G+ A +L
Sbjct: 585 NMKDNSCIPDTVTYKTIISSLLDKGEKDKARKL 617
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 103/132 (78%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+I+FN I+ +VK KH +AISL QM F+G+ P I TL+I INCYCHLG+M AFSV
Sbjct: 39 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 98
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +LKRGY+PN IT TT++KGLC+N +V++A+ FHD + AQG+ L++V YG LINGLCK
Sbjct: 99 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 158
Query: 169 VGQTRAALRLLR 180
+G++ A +LL+
Sbjct: 159 IGRSIDAFQLLQ 170
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ M P I+ + ++ +T + L +M + I P++ T N+LI+ +C
Sbjct: 203 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 262
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A + ++KRG +P+ +TF TLI G CL+ V A + D + +GI +
Sbjct: 263 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 322
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY ILI G CK + A+ L
Sbjct: 323 SYTILIIGYCKCKRIDEAVSLF 344
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P + + ++ K K A+SL ++M + ++ DIV + LI+ C
Sbjct: 308 LFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLC 367
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++S A+ + + I G PN IT+ LI C + ++ + +G+ +
Sbjct: 368 KSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVL 427
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ILING CK + R A+ LL
Sbjct: 428 TYNILINGYCKSKRIREAMNLL 449
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LFN + I+ ++ ++ L K+ S A L + G P+++T NIL
Sbjct: 338 DEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNIL 397
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + + + + + +G P +T+ LI G C + +++ A+ + ++ +
Sbjct: 398 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 457
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y L +GLCK G+ A L +
Sbjct: 458 APDSITYNSLFDGLCKSGRISDAWELFK 485
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ FN ++ + A + + M RG PDIVT N LI+ +C G + A +
Sbjct: 249 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 308
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +RG P+ ++T LI G C ++ A+ +E+ + + L+ V Y LI+GLCK
Sbjct: 309 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 368
Query: 169 VGQTRAALRLL 179
G+ A L
Sbjct: 369 SGRISYAWELF 379
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + P++I +N ++ K + + I L M +G+ P ++T NILIN YC
Sbjct: 378 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 437
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A ++L+ + + P++IT+ +L GLC + ++ A + + G ++
Sbjct: 438 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 497
Query: 158 SYGILINGLCK 168
+Y +L++ CK
Sbjct: 498 TYNVLLDAFCK 508
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +++ P I+ FN +++ + A L + RGI+PD+ + ILI
Sbjct: 269 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 328
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC ++ A S+ ++ + + + +++LI GLC + ++ A + + G
Sbjct: 329 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPP 388
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y ILI+ CK+ + L +
Sbjct: 389 PNVITYNILIDAFCKIQDIDMGIELFK 415
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A L +ME + + P+IV N++I+ +C A + KI+
Sbjct: 149 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 208
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P+ +T+T+LI+G C Q Q E++ + I N ++ +LI+ C+ G+
Sbjct: 209 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 174 AA 175
A
Sbjct: 269 EA 270
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + P+I+ +N I+ K + A L ++ GI PDI+T LI
Sbjct: 164 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 223
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C GQ ++ +++ + PN TF LI C ++ A + ++ +G Q
Sbjct: 224 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 283
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI+G C G A +L
Sbjct: 284 PDIVTFNTLISGHCLHGNVLEARKLF 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L+ + P+ I ++ L A+ + +G++ D V LIN C +G+
Sbjct: 102 VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGR 161
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
AF +L ++ + KPN + + +I C ++ +A + +++ GI + ++Y
Sbjct: 162 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 221
Query: 162 LINGLCKVGQTRAALRLL 179
LI G C+ GQ +L+
Sbjct: 222 LIRGFCRTGQWGEVKQLM 239
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 6/175 (3%)
Query: 12 NPTFLLAMPFSS----LHSHSRSLP--NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK 65
NP F+ + FSS +++ + P + + FNRL TP I +F +IL L +
Sbjct: 18 NPNFIHSFRFSSSPSTIYTQFNNNPHHENLISRFNRLTNQIPTPPISQFGRILASLALSN 77
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
YSIA+S ++ F+GI PD+ T N+LINC+ LG AFS+ A ILKRGY P+ +TF
Sbjct: 78 RYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFN 137
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
TLI GLCL +V +AL F ++L+ QL++VSY LINGLCKVG+TRAALRLL+
Sbjct: 138 TLINGLCLKGEVHKALNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLK 192
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +DA L+ ++ R +P + +N ++ AI L + M+ + D T N
Sbjct: 218 LVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFN 277
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ +C G + +V+A ++K G KP+ IT+ +L+ G CL +V +A + ++ +
Sbjct: 278 TLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQR 337
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+ING CKV A+ L +
Sbjct: 338 GVTANVRSYSIMINGFCKVKMMDEAMNLFQ 367
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A +FN ++Q T ++ ++ ++ K K A++L +M + I+PD + + L
Sbjct: 325 DKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSL 384
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C G++ A ++ ++ RG PN IT+ +++ LC V++ + ++ +GI
Sbjct: 385 IDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGI 444
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q + +Y IL NGL K G+ A +
Sbjct: 445 QPDAYTYTILTNGLFKDGRLEEAREIF 471
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN + FN +++ K + ++ M G+ PDI+T N L+
Sbjct: 256 DAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLM 315
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + ++ A ++ +++RG N +++ +I G C + A+ E+ + I
Sbjct: 316 DGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEII 375
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LI+G CK G+ AL L+
Sbjct: 376 PDTIAYSSLIDGFCKSGRIPQALELV 401
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P II +N ++ K A ++ + M RG+ ++ + +I+IN +C + M A ++
Sbjct: 306 PDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNL 365
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + P+TI +++LI G C + ++ +AL+ DE+ +G N ++Y ++ LCK
Sbjct: 366 FQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCK 425
Query: 169 VGQTRAALRLLR 180
+ + LLR
Sbjct: 426 IHHVEKTIALLR 437
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 67/141 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F +L+ ++ + + ++ L K A+ L ++ + + D+V +IN
Sbjct: 152 ALNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIIN 211
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C + AF + +++ + P+ T+ +I G C+ ++K A+ +++ + ++
Sbjct: 212 GLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEA 271
Query: 155 NQVSYGILINGLCKVGQTRAA 175
++ ++ L++ CK G R
Sbjct: 272 DEYTFNTLVSAFCKEGNVREG 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ + I+ L K K A L +M + + PD+ T N +I +C +G++ A +
Sbjct: 202 DVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLF 261
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ + + TF TL+ C V+ ++ +G++ + ++Y L++G C V
Sbjct: 262 NDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLV 321
Query: 170 GQTRAA 175
+ A
Sbjct: 322 KEVDKA 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P I ++ ++ K+ A+ L +M RG P+I+T N +
Sbjct: 360 DEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSI 419
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ C + + ++L KI +G +P+ T+T L GL + +++ A + +L
Sbjct: 420 LYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 474
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 10/163 (6%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
H+ + +DAV LFNRLLQ TP IEFNKIL LVK+KHY + LS +MEFRGI P++
Sbjct: 38 HNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNL 97
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQV--------- 137
V NILIN +C LG + AFSVL KILK GYKPNTIT TLIKGLCLN ++
Sbjct: 98 VNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 138 -KRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
K A+ ++++ + I + ++ IL++G CK G+ + A +L
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVL 200
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 83/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q+ +P I ++ ++ K K A+ L +M + I+P++VT + L
Sbjct: 229 NKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSL 288
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG PN +T+++++ LC N QV A+ ++ QGI
Sbjct: 289 IDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGI 348
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N +Y ILI GLC+ G+ A ++
Sbjct: 349 QPNMYTYTILIKGLCQSGKLEDARKVFE 376
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + + P+++ ++ ++ L K+ S A+ L +M RG P+IVT + +
Sbjct: 264 DEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 323
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L ++ +G +PN T+T LIKGLC + +++ A + ++LL +G
Sbjct: 324 LDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN +Y ++I G C G AL LL
Sbjct: 384 NLNVYTYTVMIQGFCDKGLFDEALTLL 410
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPL-----VKTKHYSI-----AISLSHQMEFRGIMP 84
A + ++L+M + P+ I N ++ L + KH + A+ L ++M I P
Sbjct: 116 AFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINP 175
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+ T IL++ +C G++ A +VLA ++ +G KP +T+ +L+ G L QV +A
Sbjct: 176 DVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIF 235
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + G+ + SY ILING CK+ A+ LL+
Sbjct: 236 NTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ K + A S+ + M G+ PDI + +ILIN +C + M A +
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + PN +T+++LI GLC + ++ AL+ DE+ +G N V+Y +++ LCK
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329
Query: 169 VGQTRAALRLL 179
Q A+ LL
Sbjct: 330 NHQVDNAIALL 340
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV LFN+++ P + F ++ K A ++ M +GI P +VT N L+
Sbjct: 160 DAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLM 219
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + Q++ A S+ + + G P+ +++ LI G C + A++ E+ + I
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ AL+L+
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLV 305
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P+I+ ++ IL L K AI+L QM+ +GI P++ T ILI
Sbjct: 301 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIK 360
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A V +L +G+ N T+T +I+G C AL ++ G
Sbjct: 361 GLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIP 420
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N +Y I+I L K + A +LL
Sbjct: 421 NAKTYEIIILSLFKKDENEMAEKLL 445
>Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30131763-30132528 | 20130731
Length = 175
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 87/104 (83%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +GI D+V L+ILINC+CHL Q++ AFSVLAKI K GY+P+TIT TTL+KGLCL+ Q
Sbjct: 1 MELQGIQTDVVNLSILINCFCHLHQLNYAFSVLAKIFKFGYQPDTITMTTLMKGLCLSGQ 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
V++AL FHD+++ +G +L+ VSYG LINGLCK G+TRAAL++L
Sbjct: 61 VRKALHFHDDVIEKGFKLDHVSYGTLINGLCKSGETRAALQVLE 104
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 93/146 (63%), Gaps = 23/146 (15%)
Query: 36 VCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
V FNRLL ++ TP I EF KIL LVK Y AISL QME +GI ++VTLNILIN
Sbjct: 44 VSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILIN 103
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ LGQ ++FSV A ILK+GY PN IT TTLIKGLCL
Sbjct: 104 CFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCL--------------------- 142
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+VSYG LINGLCKVGQ RAAL+LLR
Sbjct: 143 -KVSYGTLINGLCKVGQARAALQLLR 167
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 83/150 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A L++ ++ +P ++ ++ +++ AI L ++M I PD+ T N
Sbjct: 193 LVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 252
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G+M +V A ++K+G KPN +T+ +L+ G CL QV +A + +
Sbjct: 253 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG 312
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ + A+ L +
Sbjct: 313 GVNPDTQSYNIMINGFCKIKKVDEAMNLFK 342
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P +N ++ K K A++L +M + I+P++VT L
Sbjct: 300 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL--------QFH 144
I+ C G++S A ++ ++ RG P+ IT+++++ LC N QV +A+ Q
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 419
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++L +G L+ +Y ++I G C G AL LL
Sbjct: 420 EDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 454
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 79/142 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P+++ + ++ K + A S+ + M G+ PD + NI+IN +C
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 329
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A ++ K+ + PN +T+T+LI GLC + ++ AL+ DE+ +G+ + +
Sbjct: 330 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDII 389
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK Q A+ LL
Sbjct: 390 TYSSILDALCKNHQVDKAIALL 411
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 69/124 (55%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + P++V N +I+ C + ++ AF + ++
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G P+ +T++ LI G + ++K A+ ++++ + I+ + ++ IL++G CK G+
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 172 TRAA 175
+
Sbjct: 264 MKEG 267
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ P+++ + ++ L K+ S A+ L +M RG+ PDI+T + +
Sbjct: 335 DEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSI 394
Query: 93 INCYCHLGQMSVAFSVLAKI--------LKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++ C Q+ A ++L K+ +GY + +T +I+G C+ AL
Sbjct: 395 LDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 454
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ G + +Y I+I L K + A +LLR
Sbjct: 455 SKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLR 490
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 97/148 (65%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV FNR++++ P F+K+L +V+ HY AISL Q++ +GI P I T IL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCY H + AFS+LA ILK GY+PN +TF T+I G C+N + +AL F LLAQG
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+Q +YG LINGL K GQ +AAL LL+
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQ 184
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF L P+I +N ++ L + S L +M PD+VT NIL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ A VL ++K+G KPN +T+ ++ G CL + V A + ++ G+
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y +LING CK A+ L +
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFK 499
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ L +++ + + +N ++ + L +M + PD T NIL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ A VLA + KRG KP+ +T+ L++G C + V A + + ++ +G+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y +LI+G CK A+ L +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMR----------HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C R+L+ + P I+ +N ++ ++ A L ++M RG+
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD++ N+LI+ YC + A + ++ + P ++ +LI GLC + ++ +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE+ + V+Y ILI+ LCK G+ AL +L
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++++ P FN ++ L K A + M RG PDIVT N L+ YC
Sbjct: 252 LLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + +++KRG +P+ + + LI G C V A+ EL + +
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY LI+GLC G+ +LL
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLL 393
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R+ N A +FNR+++ P I+ +N ++ KT+ AI L +M + ++PDI +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL--------------------- 127
N LI+ C+LG++ +L ++ G P+ IT+ L
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 128 -------------IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
+ LC +++K A LL G N +Y ILIN LCK G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 175 ALRLL 179
A+ LL
Sbjct: 633 AMLLL 637
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQ--------MRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C R+L+ M+ P+I+ +N ++ + ++A + ++M G+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PDI+ N+LIN YC + A + ++ + P+ ++ +LI GLC ++ +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
DE+ G + ++Y IL++ CK A+ L R
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 75/140 (53%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
SR ++A LFNR+++ P ++ +N ++ KTK A+ L ++ + ++P I
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N LI+ C+ G++S +L ++ P+ +T+ LI LC ++ AL +
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMM 431
Query: 148 LAQGIQLNQVSYGILINGLC 167
+ +G++ N V+Y +++G C
Sbjct: 432 MKKGVKPNIVTYNAMMDGYC 451
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A+ L +ME + P++V + LI+ C G +S A + ++I
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+RG + +T+ +LI G C + + Q +++ + + + ++ ILI+ LCK G+
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 174 AALRLL 179
A +L
Sbjct: 283 EAQGVL 288
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD------------ 85
L + + +P +I +N +L KT+ + AISL Q+ GI PD
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLC 590
Query: 86 -----------------------IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
+ T ILIN C G A +L+K+ P+ I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
TF +I L ++ +A + +E++A+G+ + SY
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSY 687
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 97/148 (65%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV FNR++++ P F+K+L +V+ HY AISL Q++ +GI P I T IL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCY H + AFS+LA ILK GY+PN +TF T+I G C+N + +AL F LLAQG
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+Q +YG LINGL K GQ +AAL LL+
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQ 184
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF L P+I +N ++ L + S L +M PD+VT NIL
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ A VL ++K+G KPN +T+ ++ G CL + V A + ++ G+
Sbjct: 412 IDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y +LING CK A+ L +
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFK 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ L +++ + + +N ++ + L +M + PD T NIL
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ A VLA + KRG KP+ +T+ L++G C + V A + + ++ +G+
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y +LI+G CK A+ L +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMR----------HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C R+L+ + P I+ +N ++ ++ A L ++M RG+
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD++ N+LI+ YC + A + ++ + P ++ +LI GLC + ++ +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE+ + V+Y ILI+ LCK G+ AL +L
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++++ P FN ++ L K A + M RG PDIVT N L+ YC
Sbjct: 252 LLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + +++KRG +P+ + + LI G C V A+ EL + +
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY LI+GLC G+ +LL
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLL 393
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R+ N A +FNR+++ P I+ +N ++ KT+ AI L +M + ++PDI +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL--------------------- 127
N LI+ C+LG++ +L ++ G P+ IT+ L
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 128 -------------IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
+ LC +++K A LL G N +Y ILIN LCK G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 175 ALRLL 179
A+ LL
Sbjct: 633 AMLLL 637
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQ--------MRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C R+L+ M+ P+I+ +N ++ + ++A + ++M G+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PDI+ N+LIN YC + A + ++ + P+ ++ +LI GLC ++ +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
DE+ G + ++Y IL++ CK A+ L R
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 75/140 (53%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
SR ++A LFNR+++ P ++ +N ++ KTK A+ L ++ + ++P I
Sbjct: 312 SRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA 371
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N LI+ C+ G++S +L ++ P+ +T+ LI LC ++ AL +
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMM 431
Query: 148 LAQGIQLNQVSYGILINGLC 167
+ +G++ N V+Y +++G C
Sbjct: 432 MKKGVKPNIVTYNAMMDGYC 451
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A+ L +ME + P++V + LI+ C G +S A + ++I
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+RG + +T+ +LI G C + + Q +++ + + + ++ ILI+ LCK G+
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 174 AALRLL 179
A +L
Sbjct: 283 EAQGVL 288
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 36/150 (24%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD------------ 85
L + + +P +I +N +L KT+ + AISL Q+ GI PD
Sbjct: 532 LLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLC 590
Query: 86 -----------------------IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
+ T ILIN C G A +L+K+ P+ I
Sbjct: 591 KGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAI 650
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
TF +I L ++ +A + +E++A+G+
Sbjct: 651 TFEIIIGVLLQRNETDKAEKLREEMIARGL 680
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 82/104 (78%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEF+GI P V+ NILINC+C LG +S AFS+LAKILK GY+P+TIT TT IK LCL Q
Sbjct: 1 MEFKGIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQ 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD+++A G L+QVSYG LINGL KVG+T+ AL LLR
Sbjct: 61 IHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLR 104
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I +N ++ K+K A++L +M R ++PD+VT N L
Sbjct: 209 NKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSL 268
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I+ C LG+ S A ++ ++ RG PN IT+++++ LC N QV +A+
Sbjct: 269 IDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQVDKAI 317
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF----- 106
+ +N ++ + K KH + A L +M + I P +VT + LI +C +G++ A
Sbjct: 116 VMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKE 175
Query: 107 --SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
+V A ++K+ KPN T+ +L+ G CL +V +A + + G+ + SY ILIN
Sbjct: 176 AKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILIN 235
Query: 165 GLCKVGQTRAALRLLR 180
G CK T A+ L
Sbjct: 236 GFCKSKMTDEAMNLFE 251
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F +++ P++ +N ++ K + A S+ + M G+ PDI + NILI
Sbjct: 175 EAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILI 234
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C A ++ ++ R P+ +T+ +LI GLC + AL+ DE+ +G
Sbjct: 235 NGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQP 294
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y ++N LCK Q A+ LL
Sbjct: 295 PNIITYSSILNALCKNHQVDKAITLL 320
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + ++L+ + P I + L A+ ++ G D V+ LIN
Sbjct: 29 AFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLIN 88
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+G+ A +L ++ + + N + + T+I G+C + V A + E++A+ I
Sbjct: 89 GLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYP 148
Query: 155 NQVSYGILINGLCKVGQTRAAL 176
V+Y LI G C VG+ + A+
Sbjct: 149 GVVTYSALIIGFCIVGKLKDAI 170
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 105/164 (64%), Gaps = 24/164 (14%)
Query: 19 MPFSSLHS--HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P+SS + HS + +DAV LFNRLL+ TP EFNKIL L T YSIA S
Sbjct: 51 IPYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILEELNLT--YSIATFSS-- 106
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
IV++N + +S+AFSV AKILK GY PNTIT TLIKGLCL Q
Sbjct: 107 ---------IVSVNWV---------LSLAFSVFAKILKMGYHPNTITLNTLIKGLCLKGQ 148
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +A FHD+L+A G L+QVSYG LI+GLCKVG+TRAAL LL+
Sbjct: 149 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 192
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ +P+++ ++ +++ AI L +++ I PD T NIL
Sbjct: 220 NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNIL 279
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C +M +V A ++K+G P+ +T+ +L+ G CL +V A + + G+
Sbjct: 280 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGV 339
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ILING CK+ + A+ L
Sbjct: 340 NPDIRSYNILINGFCKIKKVDKAMNLFN 367
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I +N ++ K K A++L ++M + I+P++VT N L
Sbjct: 325 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 384
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A ++ ++ RG PN +T+ ++I L QV +A+ + QGI
Sbjct: 385 IDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 444
Query: 153 QLNQVSYGILINGLCKV 169
Q + +Y ILI+GLCKV
Sbjct: 445 QPSMYTYTILIDGLCKV 461
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN+++ P FN ++ K + ++ M +GI+PD+VT N L+
Sbjct: 256 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 315
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A S+ + + G P+ ++ LI G C +V +A+ +E+ + I
Sbjct: 316 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 375
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GL K G+ AL+L+
Sbjct: 376 PNVVTYNSLIDGLSKSGRISYALQLV 401
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P ++ +N ++ K + A S+ + M G+ PDI + NILIN +C
Sbjct: 295 VFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFC 354
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A ++ ++ + PN +T+ +LI GL + ++ ALQ D++ +G+ N +
Sbjct: 355 KIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNIL 414
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +I+ L K Q A+ L+
Sbjct: 415 TYNSIIDALFKTHQVDKAIALI 436
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + K KH + A L +M +GI P++VT + LI+ + +G++ A + K
Sbjct: 204 VMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNK 263
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
I+ KP+ TF L+ G C + ++K ++ QGI + V+Y L++G C V +
Sbjct: 264 IILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKE 323
Query: 172 TRAA 175
A
Sbjct: 324 VNTA 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LFN + P+++ +N ++ L K+ S A+ L QM RG+ P+I+T N +
Sbjct: 360 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 419
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI--------------------KGLC 132
I+ Q+ A +++ K +G +P+ T+T LI G C
Sbjct: 420 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFC 479
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
AL ++ N V+Y I I L + A +L R
Sbjct: 480 KKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFR 527
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 63/117 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + + V N +I C ++ AF + ++
Sbjct: 169 VSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSE 228
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ +G PN +T++ LI G + ++K A+ ++++ + I+ + ++ IL++G CK
Sbjct: 229 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP------------------DIV--T 88
P+I+ +N I+ L KT AI+L + + +GI P DI T
Sbjct: 411 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNT 470
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N++I+ +C G A S+L+K+ PN +T+ I+ L N++ +A + E++
Sbjct: 471 YNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMI 530
Query: 149 AQGIQLNQVSY 159
+G+ SY
Sbjct: 531 TRGLLNRSASY 541
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 29/133 (21%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+I EF KI LVK H+ ISLSHQME RGI D+V LNIL+NC+CHLGQ
Sbjct: 5 TPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQ------ 58
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+CLND+VK L FHD+++A+G QLNQVSYG LI+GLC
Sbjct: 59 -----------------------VCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLC 95
Query: 168 KVGQTRAALRLLR 180
K G+TRAA+++LR
Sbjct: 96 KAGETRAAMQVLR 108
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 11 RNPTFLLAMPFSSLHSH------SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT 64
RN LL P ++S L DA L++++L R +P +I +N ++ +
Sbjct: 108 RNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIV 167
Query: 65 KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
A+ L +QM + I PDI T NIL++ C G+M A +VLA ++K+ P+ IT+
Sbjct: 168 GRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITY 227
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+L+ G L Q +A + + +G+ + SY ++INGLCK A+ LL+
Sbjct: 228 NSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLK 283
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 81/143 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + + TP + ++ ++ L KTK A++L +M + + P+ VT + L
Sbjct: 241 NKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSL 300
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++ A+ ++ ++ RG + IT+ +L+ LC N QV +A+ ++ QGI
Sbjct: 301 IDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI 360
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q + +Y IL++GLCK G+ + A
Sbjct: 361 QPDIYTYTILVDGLCKNGRLKDA 383
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LFN++L P I FN ++ L K A ++ M + + PD++T N L+
Sbjct: 172 EAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLM 231
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + Q + A V + +RG P+ +++ +I GLC V A+ E+ ++ +
Sbjct: 232 DGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMA 291
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GL K G+ A L+
Sbjct: 292 PNTVTYSSLIDGLHKSGRIFDAWDLV 317
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L + P+ + ++ ++ L K+ A L ++M RG D++T N L
Sbjct: 276 DEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSL 335
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L KI +G +P+ T+T L+ GLC N ++K A + + LL +G
Sbjct: 336 LDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGY 395
Query: 153 QL---------------------NQVSYGILINGLCKVGQTRAALRLLR 180
L N V++ ILI L + A+ LLR
Sbjct: 396 HLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLR 444
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
LH R DA L N + +I +N +L L K AI+L +++ +G
Sbjct: 302 DGLHKSGRIF--DAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQG 359
Query: 82 IMPDIVTLNILINCYCHLGQM---------------------SVAFSVLAKILKRGYKPN 120
I PDI T IL++ C G++ A S+L+K+ G PN
Sbjct: 360 IQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPN 419
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+TF LI+ L ND +A++ E++A+G+
Sbjct: 420 PVTFEILIRALFENDMNDKAVELLREMIARGL 451
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++ + P++V + +I C + AF + ++
Sbjct: 85 VSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQ 144
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+L + P+ IT+ TL+ G + ++K A+ +++L + I+ + ++ IL++GLCK G+
Sbjct: 145 MLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGE 204
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 205 MKKARNVL 212
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 79/104 (75%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEF GI PD+V NIL NC+C LG + +FSVLAKILK GY+P+TIT TLIKGLCL
Sbjct: 1 MEFLGIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGD 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD+L+A G L+Q SYG LIN LCK G+T+AAL LLR
Sbjct: 61 IHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLR 104
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI--------------- 93
P ++++ I+ + K KH + A L +M + I PDI+T N LI
Sbjct: 113 PDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFVTY 172
Query: 94 ----NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+ YC L +++ A S+ + + G P ++ LI G C +V A+ +E+
Sbjct: 173 NSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHC 232
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + + V+Y LI+GLCK G+ AL+L+
Sbjct: 233 RKLIPDVVTYNSLIDGLCKSGKISYALKLV 262
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P+I +N ++ K K AI+L +M R ++PD+VT N L
Sbjct: 186 NKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVTYNSL 245
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTIT 123
I+ C G++S A ++ ++ RG P+ IT
Sbjct: 246 IDGLCKSGKISYALKLVDEMHDRGQPPDIIT 276
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 57/103 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + +N ++ K + A S+ + M G+ P I + NILIN +C + ++ A ++
Sbjct: 167 PNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINL 226
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++ R P+ +T+ +LI GLC + ++ AL+ DE+ +G
Sbjct: 227 FEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 269
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
++L+M + P I N ++ L A+ ++ G M D + LIN C G
Sbjct: 35 KILKMGYEPDTITLNTLIKGLCLKGDIHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAG 94
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A +L ++ + +P+ + + +I +C + V A + +++++ I + ++Y
Sbjct: 95 ETKAALELLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYN 154
Query: 161 ILINGLCKVG 170
LI+ C VG
Sbjct: 155 ALISDFCIVG 164
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 81/104 (77%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME G + ++VTL+ILIN + LGQ ++FSVLAKI K+GY P+ IT T+LIKGLCL Q
Sbjct: 1 MELNGFVSNLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQ 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +AL FHD+L A G + N VSYG LINGLCKVGQTRAAL+LLR
Sbjct: 61 IHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLR 104
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I +N ++ K K A++L +M R I+P++VT N L
Sbjct: 178 NKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSL 237
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG P+ IT+++L+ LC N V +A+ +L QG+
Sbjct: 238 IDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGL 297
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N +Y ILINGLCK G+ A +
Sbjct: 298 QPNMYTYTILINGLCKGGRPEDAQNIFE 325
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ + A+ LF + + P+++ +N ++ L K+ S A+ L +M RG PDI+T +
Sbjct: 211 MTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYS 270
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ C + A ++L K+ +G +PN T+T LI GLC + + A ++LL +
Sbjct: 271 SLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVK 330
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G +N +Y ++I+ C G AL +L
Sbjct: 331 GYNINVNTYTVMIHVFCNNGMFGEALAML 359
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFR------GIMPDIVTLNILINCYCHL-----G 100
+ + ++ L K A+ L +++ + GI P++VT + LI+ +C L G
Sbjct: 81 VSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEG 140
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A +V A ++K+G+KPN +T+++L+ G CL +V +A + + G+ + SY
Sbjct: 141 KVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYN 200
Query: 161 ILINGLCKVGQTRAALRLLR 180
ILING CK+ T AA+ L
Sbjct: 201 ILINGFCKIKMTDAAMNLFE 220
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II ++ +L L K H AI+L +++ +G+ P++ T ILIN
Sbjct: 250 ALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILIN 309
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+ A ++ +L +GY N T+T +I C N AL ++ G
Sbjct: 310 GLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIP 369
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y I+I L + A +LL
Sbjct: 370 NAVTYEIIIRSLFDKDENDKAEKLL 394
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 83/98 (84%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME RGI DI+ L+ILIN + HL Q++ AFSVLAKILK GY+P+T+T TTL+KGLC+N++
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
VK+AL FHD+++A+G +L+ VSYG LINGLCK G+T+A
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA 98
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++AV LF + TP I ++ ++ L K S L +M G +++T +
Sbjct: 256 MVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYS 315
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L+N C G A + KI +G++PN +T+ L+ GLC N ++K A + +LL +
Sbjct: 316 SLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIK 375
Query: 151 GIQLNQVSYGILINGLCK 168
G +L+ Y ++INGLC+
Sbjct: 376 GYRLDVRLYTVMINGLCR 393
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
N A +FN + Q T + +N ++ L K K A+ L +M+F+ + PD +T +
Sbjct: 222 ANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYST 281
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ LG++S + ++ ++ G N IT+++L+ LC + A++ ++ +G
Sbjct: 282 LIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKG 341
Query: 152 IQLNQVSYGILINGLCKVGQTRAA 175
+ N V+Y IL++GLCK G+ + A
Sbjct: 342 FEPNMVTYNILVDGLCKNGRLKDA 365
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L+ ++ R P ++ +N ++ AI L ++M + I+P++ + NILI
Sbjct: 119 DAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILI 178
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G + SVLA ++K+ KP+ +T ++LI G L + +A + + G+
Sbjct: 179 DGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVT 238
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++ SY I+INGL K A+ L +
Sbjct: 239 IDLRSYNIMINGLSKAKMVDEAVILFK 265
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + ++L++ + P + +L L A+ + +G D V+ L
Sbjct: 27 NYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTL 86
Query: 93 INCYCHLGQMSV---------------------AFSVLAKILKRGYKPNTITFTTLIKGL 131
IN C G+ A+ + +++ + P+ +T+ TLI G
Sbjct: 87 INGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGF 146
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
C+ Q++ A++ +E+ + I N S+ ILI+GLCK G + +L
Sbjct: 147 CIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVL 194
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN + P++ FN ++ L K S+ M + + PD+VT + LI
Sbjct: 154 DAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLI 213
Query: 94 NCYCHLGQMSVA---FSVLAK----ILKRGYK---------------------------- 118
+ Y + + + A F+ +A+ I R Y
Sbjct: 214 DGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMT 273
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+TIT++TLI GL ++ DE+ A G N ++Y L+N LCK G A+R+
Sbjct: 274 PDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRI 333
Query: 179 L 179
Sbjct: 334 F 334
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 29/124 (23%)
Query: 44 QMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+MR T ++I ++ +L L K+ H+ AI + +++ +G P++VT NIL++ C G
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNG 360
Query: 101 QMSVAFSVLAKILKRGYK--------------------------PNTITFTTLIKGLCLN 134
++ A + +L +GY+ PN +T+ +I+ L N
Sbjct: 361 RLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGCTPNAVTYEIIIRALFKN 420
Query: 135 DQVK 138
D+ K
Sbjct: 421 DKNK 424
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAIS 72
P+FL+ + +HS + + V FN +L ++ TP I +F KIL LVK H+ IS
Sbjct: 8 PSFLVCYILNLIHSLN---VDHYVSEFNHMLNIKLTPPIFKFGKILGSLVKINHFHTVIS 64
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
LS +E RGI DIV LNIL+NC+C LGQ++ AFSVLAKILK GY+P+T+T TTLIKGLC
Sbjct: 65 LSRLIELRGIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLC 124
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ Q++ L ++ N V Y +I+ LCK
Sbjct: 125 RSGQIEGLL----------VKPNVVMYSTIIDSLCK 150
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q TP + +N ++ L K K + A +L M R + PD ++ N L
Sbjct: 184 NKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSL 243
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G +S + ++ ++ R N IT+ +L+ LC N QV +A+ ++ QGI
Sbjct: 244 IDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGI 303
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y IL++GLCK G+ A
Sbjct: 304 QPNMYTYTILVDGLCKNGRLADA 326
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A LF + TP I +N ++ L K+ S L +M R +++T N L
Sbjct: 219 NEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSL 278
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A ++L K+ +G +PN T+T L+ GLC N ++ A + + +LL +G
Sbjct: 279 LDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGY 338
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN Y +++N CK G AL LL
Sbjct: 339 PLNVSMYNVMVNEFCKEGLFDEALSLL 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + ++ K + A + + + RG+ P++ + N++IN C ++ A ++
Sbjct: 165 PNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMVNEAANL 224
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ R P+TI++ +LI GLC + + DE+ + +N ++Y L++ LCK
Sbjct: 225 FKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDALCK 284
Query: 169 VGQTRAALRLLR 180
Q A+ LL+
Sbjct: 285 NHQVDKAIALLK 296
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++I +N +L L K AI+L +M+ +GI P++ T IL++ C G+++ A +
Sbjct: 271 NVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIY 330
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L +GY N + ++ C AL ++ G + ++Y LI L +
Sbjct: 331 HDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFEN 390
Query: 170 GQTRAALRLLR 180
+ A++LLR
Sbjct: 391 NKNDKAVKLLR 401
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ ++ I+ L K K S A+ + +G+ P++VT L++ Y + +++ A +
Sbjct: 136 PNVVMYSTIIDSLCKDK-LSGAVMIK-----QGVEPNVVTYTSLMDGYFLVKEVNKATYI 189
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
I +RG P ++ +I GLC N V A ++ ++ + + +SY LI+GLCK
Sbjct: 190 FNTIAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCK 249
Query: 169 VGQTRAALRLL 179
G L+
Sbjct: 250 SGSISDVWDLI 260
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L ++ P++ + ++ L K + A + H + +G ++ N++
Sbjct: 289 DKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNVM 348
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N +C G A S+L+K+ G P+ IT+ TLI L N++ +A++ E++ +G+
Sbjct: 349 VNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVRGL 408
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
H N T L + S ++A+ F+ + +M PS+I+F +L +VK KHY+
Sbjct: 50 HSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTT 109
Query: 70 AISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
AISL +M GI PD LN++IN CHL ++ FSVL +LK G +P+ +TFT LI
Sbjct: 110 AISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILI 169
Query: 129 KGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GLC+ V RA++ D + G + + +YG+LINGLCK+G+T A+ LR
Sbjct: 170 NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLR 221
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ +L++ PS++ F ++ L A+ L +E G D+ T +LIN C
Sbjct: 149 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 208
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+ S A L K+ +R + PN + ++T++ GLC + V AL E+ +GI+ N V
Sbjct: 209 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 268
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI GLC G+ + A LL
Sbjct: 269 TYTCLIQGLCNFGRWKEAGSLL 290
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + +++M P + N ++ L K A S+ M G +PD+ T N LI
Sbjct: 285 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 344
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC QM A V ++ RG P+ + +T+LI G C + +A+ DE++ G
Sbjct: 345 DRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFT 404
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI G C+VG+ AA L
Sbjct: 405 PDVVTWTTLIGGFCQVGRPLAAKELF 430
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + ++ L + A SL +M G+MPD+ +LNIL++ C G++ A SV
Sbjct: 265 PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV 324
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ G P+ T+ +LI CL +Q+ A + + ++++G + V+Y LI+G CK
Sbjct: 325 IGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCK 384
Query: 169 VGQTRAALRLL 179
+ A+ LL
Sbjct: 385 IKNINKAMHLL 395
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F ++ P I+ + ++ K K+ + A+ L +M G PD+VT L
Sbjct: 354 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTL 413
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C +G+ A + + K G PN T ++ GLC + + AL + +
Sbjct: 414 IGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNL 473
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
LN V Y I+++G+C G+ AL L
Sbjct: 474 DLNIVIYSIILDGMCSAGKLNTALELF 500
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV L + + + + + + ++ L K S A+ +ME R P++V + +++
Sbjct: 181 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 240
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G +S A + ++ +G KPN +T+T LI+GLC + K A DE++ G+
Sbjct: 241 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 300
Query: 155 NQVSYGILINGLCKVGQTRAA 175
+ S IL++ LCK G+ A
Sbjct: 301 DLQSLNILVDVLCKEGKIMQA 321
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L + ++++ TP ++ + ++ + A L M G +P++ T I+
Sbjct: 389 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 448
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C +S A S+ + K N + ++ ++ G+C ++ AL+ L A+G+
Sbjct: 449 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 508
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q+N +Y I+ING K G A LL
Sbjct: 509 QINVYAYTIMINGFAKQGLLDKAEDLL 535
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 9/180 (5%)
Query: 1 MSVLRYRWFHRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTP 60
+S L R+ H P S + +S N+ + F L +P IIEFN L
Sbjct: 14 ISTLFLRFSHARP---------SAPTQFQSPQNEDLDSFKNLPVKSSSPRIIEFNNRLHS 64
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
LV K++ ++ ME + P+ T+NIL+NC+ + ++AFS+ AK+LK GY+PN
Sbjct: 65 LVMQKNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAFSMFAKLLKLGYEPN 124
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
ITF +L+K +C N +V+ AL HD+L G+ L VSYG LI+GLCK+ + AA+ +L+
Sbjct: 125 IITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLCKINRHDAAMLVLK 184
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +F +LL++ + P+II FN +L + +A+ L +++ G+ IV+ L
Sbjct: 107 NLAFSMFAKLLKLGYEPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTL 166
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + + A VL K +K P+ I + T+I LC + +V+ AL+ + E++ GI
Sbjct: 167 ISGLCKINRHDAAMLVLKK-MKVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGI 225
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI+GLC +AA +
Sbjct: 226 FPDVFTYTTLIHGLCISDNFKAAFEFFK 253
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI---AISLSHQMEFRGIMPDIVTLNILIN 94
+F L Q TP I +N + L+ ++ +I + L M+ + + PD++T N +I+
Sbjct: 321 IFYSLPQRGITPDIYSYNILFKGLL-SQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIH 379
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ +M A+ + +++ +G +P+ T+ L+K LC ++ A+ + + QGIQL
Sbjct: 380 GMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQL 439
Query: 155 NQVSYGILINGLCKVGQTRAA 175
+ ++ ILI+ K G+ AA
Sbjct: 440 DAYTFTILIDAFWKSGRFEAA 460
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N +L L + K AI+L++++ +GI D T ILI+ + G+ A +
Sbjct: 404 PDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQAT 463
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+GY F ++KGLC N A++ ++ +G N+ Y +++ L +
Sbjct: 464 FWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKGCTPNKAIYEVIVYALFE 523
Query: 169 VGQTRAALRLL 179
+ A +L+
Sbjct: 524 NDEIEKATKLV 534
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
F L S ++P + + LF + + +P +I +N I+ + A +M +
Sbjct: 341 FKGLLSQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDK 400
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI PD T N L+ C ++ A ++ +I +G + + TFT LI + + + A
Sbjct: 401 GIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAA 460
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G L + +++ GLC+ A+++L
Sbjct: 461 QATFWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKIL 499
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + +++ P I + I+ L K A+ L +M GI PD+ T LI
Sbjct: 177 DAAMLVLKKMKVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLI 236
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C AF +++ P T++ L+ LC +V+ + + ++ G++
Sbjct: 237 HGLCISDNFKAAFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLE 296
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ + L+ G C + Q + A R+
Sbjct: 297 PDLAIFNTLMEGHCSLHQMQKAKRIF 322
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L+ +++ P + + ++ L + ++ A +M I P + T + L+
Sbjct: 213 ALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVSNEINPTVYTYSALMA 272
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ + ++L ++K G +P+ F TL++G C Q+++A + L +GI
Sbjct: 273 YLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITP 332
Query: 155 NQVSYGILINGLCKVG 170
+ SY IL GL G
Sbjct: 333 DIYSYNILFKGLLSQG 348
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 123 bits (308), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)
Query: 9 FHRNPTFLLAMPFSSLH----SHSRSLPNDAVCLFNRLLQMRHT-PSIIEFNKILTPLVK 63
FH+N +L + H + + SLP R + H+ S+ FNK LT L+K
Sbjct: 2 FHQNMKRMLLRHTTLFHRSTAAKTSSLP--------RFINSFHSHSSLAHFNKHLTCLMK 53
Query: 64 TKHYSIAISLSHQMEFRGIMPDIVTLNILIN-CYCHLGQMSVAFSVLAKILKRGYKPNTI 122
T +S AI+L +Q E+ + + +I C+ HLG +S +FS+ KILKRGY +T+
Sbjct: 54 TNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIFGKILKRGYGLDTV 113
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T++KGLC+N V +AL+FHDE++ G LN+VSYGILINGLC+ G+ A+ LLR
Sbjct: 114 ALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLR 171
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 83/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LFN+L++ TP + + ++ ++ A++L M + ++P IVT + L
Sbjct: 417 DQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCL 476
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A+ +L ++ +G P+TIT++ L+ L + A+ ++++ +G+
Sbjct: 477 IDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGL 536
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + Y I+I+G CK + A+ L R
Sbjct: 537 EPDVMCYTIMIDGYCKSERIDEAINLFR 564
Score = 75.5 bits (184), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 78/146 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV +F+ + + P+I+ +N ++ L K S A + M G+ PDIVT IL+
Sbjct: 348 DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 407
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C ++ A + ++++ G P+ ++T LI G C + ++ A+ ++ + +
Sbjct: 408 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 467
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GLC+ G+ A RLL
Sbjct: 468 PHIVTYSCLIDGLCRSGRISNAWRLL 493
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 76/143 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + + +N + K A+ + +M G++P+IVT N LI+C C
Sbjct: 317 LFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLC 376
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++S A+ ++ + + G P+ +T L+ GLC + ++ +A+ ++L+ G+ +
Sbjct: 377 KAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVW 436
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SY ILI+G C + A+ LLR
Sbjct: 437 SYTILIHGCCTSRRMGEAMNLLR 459
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+N ++ P+ + ++ L + L +M RG+ + +LI+ C
Sbjct: 212 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLC 271
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A + +++ RGY+PN +T T L+ G CL V A + D + G + +
Sbjct: 272 KNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVW 331
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y + I+G CKVG+ R A+R+
Sbjct: 332 TYNVFIHGYCKVGRVRDAVRVF 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ F ++ L K A + +M RG P+IVT L+ YC G + +A +
Sbjct: 259 SVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELF 318
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
I + G+K + T+ I G C +V+ A++ DE+ +G+ N V+Y LI+ LCK
Sbjct: 319 DAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA 378
Query: 170 GQTRAALRLLR 180
G+ A +++
Sbjct: 379 GEVSGAWEIVK 389
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 67/122 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I+ ++ ++ L ++ S A L ++M +G +PD +T +IL++ + A +
Sbjct: 468 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFL 527
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++KRG +P+ + +T +I G C ++++ A+ E+ + + + V+Y IL N + K
Sbjct: 528 FNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 587
Query: 169 VG 170
G
Sbjct: 588 SG 589
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 66/121 (54%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP I+ +L L K+K AI L +Q+ G+ PD+ + ILI+ C +M A +
Sbjct: 397 TPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMN 456
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L + + P+ +T++ LI GLC + ++ A + +E+ +G + ++Y IL++ L
Sbjct: 457 LLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALW 516
Query: 168 K 168
K
Sbjct: 517 K 517
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++L+ + + N +L L A+ ++ G + V+ ILIN C
Sbjct: 99 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 158
Query: 98 HLGQMSVAFSVLAKILKR------GY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
G+++ A ++L I K G+ K N + ++ +I LC N V +F++E++
Sbjct: 159 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 218
Query: 150 QGIQLNQVSYGILINGLCKVGQ 171
G+ N+ +YG LI GLC VG+
Sbjct: 219 NGVCPNEFTYGSLIRGLCGVGK 240
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 61/130 (46%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ ++ ++ L + ++M G+ P+ T LI C +G+ F ++
Sbjct: 189 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 248
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++++RG + FT LI GLC N + A + DE++ +G + N V+ L+ G C
Sbjct: 249 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 308
Query: 170 GQTRAALRLL 179
G A L
Sbjct: 309 GNVDMARELF 318
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 41 RLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
RLL H P I ++ +L L K +H A+ L +QM RG+ PD++ I+I+ Y
Sbjct: 491 RLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGY 550
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
C ++ A ++ ++ + P+ +T+T L +
Sbjct: 551 CKSERIDEAINLFREMHMKNLVPDIVTYTILFNAV 585
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 12/161 (7%)
Query: 13 PTFLLAMPFSSLHSHSRSL-----PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-- 65
P+F + + L+S S+ + ++AV FN +L + P IIEFNKIL LVK+K
Sbjct: 24 PSFHFPLLSTRLYSQSQFVISTVDVDNAVSSFNHMLCVNPPPPIIEFNKILGSLVKSKNN 83
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
HY AISL +Q+E + PDIVT NI+INCYCHLG+++ AFS+L KILK G++PN +T T
Sbjct: 84 HYPTAISLFNQLELNRVTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLT 143
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
TLIKG + + ALQ ++ + + + V Y +I+ L
Sbjct: 144 TLIKG-----ETRAALQMLRKIEGKLVNTDVVMYTAIIDML 179
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A L H+M I+P++ T NIL++ C G + A +++A ++K+G P+ +T+T+L+
Sbjct: 193 AFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMD 252
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G CL +QV +A + L + I+ + SY I+INGLCK+ AL L +
Sbjct: 253 GYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFK 303
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N++ + +H P + + I+ L K K A++L +M
Sbjct: 252 DGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMHCE--- 308
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKI-LKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P++VT + LI+ C G++S A+ +L K+ RG N IT+ +L+ LC N V +A+
Sbjct: 309 PNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIA 368
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ QGI+ N +Y ILI+GLCK G+ R A
Sbjct: 369 LVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNA 401
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ ++ P++ N ++ L K + A ++ M +G++PD+VT L++
Sbjct: 193 AFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMD 252
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC + Q++ A V + KR KP+ ++T +I GLC V AL E+ +
Sbjct: 253 GYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMHCEP--- 309
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+GLCK G+ A LL
Sbjct: 310 NMVTYSSLIDGLCKSGRVSHAWELL 334
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 38 LFNRLLQMRHTP-SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
L +++ R P +II +N +L L K H AI+L +++ +GI P++ T NILI+
Sbjct: 333 LLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGL 392
Query: 97 CHLGQM-------SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
C G++ A ++L+K+ G P+ +T+ T+I+ L ND+ +A + E++A
Sbjct: 393 CKEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMIA 452
Query: 150 QGI 152
+G+
Sbjct: 453 RGL 455
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
++A+ LF +M P+++ ++ ++ L K+ S A L +M + RG +I+T N
Sbjct: 296 DEALNLFK---EMHCEPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNS 352
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA-- 149
L++ C + A +++ KI +G +PN T+ LI GLC +++ A DE +
Sbjct: 353 LLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEAVTLL 412
Query: 150 -----QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + V+Y +I L K + A +LLR
Sbjct: 413 SKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLR 448
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 122 bits (307), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/148 (40%), Positives = 89/148 (60%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N AV F+++L ++ P+I +FN + T + KTK+Y+ ISL I D TLNI+
Sbjct: 54 NTAVTFFHQMLTLKPLPNIKDFNLLFTFITKTKNYTTTISLIKHAHSFNINADTYTLNIV 113
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC CHLG AFSVL+++ K G KP +T T++ GLC+ V RA+ E+ G
Sbjct: 114 INCLCHLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGY 173
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N ++G L+NGLCK+G +A+ +R
Sbjct: 174 EPNGYTFGALVNGLCKIGDMVSAVGCIR 201
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 39 FNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
F+ L QM T P+++ N I+ L + + A+ L+ +ME G P+ T L+N
Sbjct: 127 FSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVNG 186
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C +G M A + +++R Y+PN + + ++ G C V AL E+ +G++ +
Sbjct: 187 LCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGS 246
Query: 156 QVSYGILINGLCKVGQTRAALRLL 179
V+Y LI G+C +G+ + A LL
Sbjct: 247 LVTYNCLIQGVCSIGEWKKAYFLL 270
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 76/146 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV +++ + P+++ +N I+ K S A+SL +M +G+ +VT N LI
Sbjct: 196 AVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQ 255
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ A+ +L +++++G P+ TFT L+ G C + A ++ G++
Sbjct: 256 GVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEP 315
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI G C + + A+++ R
Sbjct: 316 NVVTYNSLIGGYCLMNEIDEAIKVFR 341
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 83/147 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + S++ +N ++ + + A L ++M +G+MPD+ T IL
Sbjct: 229 SEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTIL 288
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G + A SV++ +++ G +PN +T+ +LI G CL +++ A++ ++ +
Sbjct: 289 VDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKC 348
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+G CKV A+ LL
Sbjct: 349 LPSVVTYNSLIHGWCKVKDVDKAMCLL 375
Score = 67.8 bits (164), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 72/136 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AVCL + + P+ F ++ L K A+ M R P++V N +++
Sbjct: 161 AVCLTREMENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMD 220
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G +S A S+ A++ ++G K + +T+ LI+G+C + K+A +E++ +G+
Sbjct: 221 GFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMP 280
Query: 155 NQVSYGILINGLCKVG 170
+ ++ IL++G CK G
Sbjct: 281 DVQTFTILVDGFCKEG 296
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ +F ++ + PS++ +N ++ K K A+ L ++M G+ PD+VT L
Sbjct: 334 DEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTL 393
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C +G+ A + + + G P +T ++ GL +K +F LL + +
Sbjct: 394 VSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGL-----IKCHFRFEAMLLFRAL 448
Query: 153 Q-----LNQVSYGILINGLCKVGQTRAALRLL 179
+ L+ V Y ++I+GLCK G+ A ++L
Sbjct: 449 EESDLDLDIVIYNVMIDGLCKDGKLNDARKVL 480
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A LF + Q P+++ +L L+K A+ L +E + DIV N+
Sbjct: 403 PLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNV 462
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C G+++ A VLA++L +G + ++ TF +I GLC + A ++ G
Sbjct: 463 MIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENG 522
Query: 152 IQLNQVSYGILINGLCK 168
Q N+ SY I + GL +
Sbjct: 523 CQPNKCSYNIFVQGLLR 539
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Query: 14 TFLLAMPFSSL-----HSHSRSLP--NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH 66
TFLL PF++ H LP ND V F+ +L P I FNK+L+ L+K K
Sbjct: 25 TFLLLYPFTTFFARTHHKKLHKLPTFNDTVSSFHHILHHHPPPPIQHFNKLLSTLIKLKR 84
Query: 67 YSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
Y+ +SL ++ + I P ++T +ILIN + LGQM AFS+L ILK G++ + T
Sbjct: 85 YNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILT 144
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TL+KGLCL +V A+ E + +G + ++V YG +INGLCK+G+TR A+++
Sbjct: 145 TLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMF 198
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIV 87
+ L ++A L +++ + +N ++ + A+ L +M RG + PD+
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T NILI+ C LG++S A++V+A ++KRG+KP+ +++ L+ G CL+ V A Q D++
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + N +SY LING CKV A+ LL
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLL 374
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+SL H+ RG D V +IN C +G+ A + K+ K PN I + T+I
Sbjct: 159 AVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVID 218
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
GLC V A E++ GI+L+ SY +I+G C VG+ +AA++LL
Sbjct: 219 GLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLL 268
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + FN ++ L K S A ++ M RG PDIV+ N L+N YC G + A V
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+++R PN I++ TLI G C V A+ E+ + + + V+Y L++GL K
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398
Query: 169 VGQT 172
G++
Sbjct: 399 SGRS 402
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + P + +N +L L K+ L M G D++T N+L
Sbjct: 368 DEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVL 427
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ Y + A ++ I++ G PN T+ L+ GLC + ++K A + L A+G
Sbjct: 428 LDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGC 487
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q N +Y I+I+GLCK G A LL
Sbjct: 488 QPNIRTYNIMIHGLCKEGFLDEAEALL 514
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A +F+++++ P++I + ++ K + A+ L +M + ++PD VT N L
Sbjct: 333 GEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCL 392
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ G+ + ++ + G + IT+ L+ +++ +AL ++ GI
Sbjct: 393 LDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGI 452
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y IL++GLCK G+ + A + +
Sbjct: 453 SPNIRTYNILLDGLCKSGRLKYAKEIFQ 480
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LF ++++ +P+I +N +L L K+ A + + +G P+I T NI+
Sbjct: 438 DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIM 497
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
I+ C G + A ++L K++ Y PN ITF T+++ +
Sbjct: 498 IHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV L + + + + I+ L K AI + +M+ + P+++ N +I
Sbjct: 158 EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVI 217
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-I 152
+ C G + A + ++++ G + + ++ ++I G C + + A++ DE++ +G +
Sbjct: 218 DGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKV 277
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ ++ ILI+GLCK+G+ A
Sbjct: 278 YPDVYTFNILIDGLCKLGRVSEA 300
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME RGI D+V +ILINC+CHLG ++ AFSVL KILK G++P+TIT TT++KG+CL Q
Sbjct: 1 MELRGIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQ 60
Query: 137 VKRALQFHDELLAQGIQLNQVSY 159
V++AL FHD ++A+G +LN V++
Sbjct: 61 VRKALHFHDHVIAKGFKLNHVTF 83
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + ++AV LF L P I +N ++ L K+ S L +M G D++T
Sbjct: 246 KKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVIT 305
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N L++ C Q+ A ++L KI +G +PN T+T L+ GLC N ++K A + LL
Sbjct: 306 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLL 365
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G L+ Y +++NGLCK G AL L+
Sbjct: 366 IKGYHLDVKMYSVMVNGLCKEGLFDDALSLV 396
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 81/143 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + + PS+ ++ ++ L K K A++L +++ + + PD +T N L
Sbjct: 215 NKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSL 274
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S + ++ ++ G + IT+ +L+ LC N QV +A+ ++ QGI
Sbjct: 275 IDGLCKSGRISDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI 334
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q N +Y IL++GLCK G+ + A
Sbjct: 335 QPNMYTYTILVDGLCKNGRLKDA 357
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + ++ R P ++ + ++ + A+ L +QM + I D+ T N L+
Sbjct: 111 DASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLV 170
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ A +VLA ++K+G P+ T+ +L+ G L +V +A + + G+
Sbjct: 171 DGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVI 230
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ++INGLCK A+ L +
Sbjct: 231 PSVQSYSVMINGLCKKKMVDEAVNLFK 257
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L + + + +I +N +L L K AI+L +++ +GI P++ T IL
Sbjct: 285 SDVWDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTIL 344
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A V +L +GY + ++ ++ GLC AL ++
Sbjct: 345 VDGLCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSC 404
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI L + G+ ++LLR
Sbjct: 405 TPNAVTYETLIRALFENGKNDKTVKLLR 432
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+E ++ L K K A +L +M + I PD+VT LI+ +C +GQ A +L +
Sbjct: 94 LEKQELPCSLCKNKLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQ 153
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+L + + TF TL+ GLC +VK+A ++ QG+ + +Y L++G V +
Sbjct: 154 MLLKNISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKE 213
Query: 172 TRAA 175
A
Sbjct: 214 VNKA 217
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D +C + Q R+ P I + ++ K + A + + + G++
Sbjct: 171 DGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVI 230
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P + + +++IN C + A ++ ++ + P+TIT+ +LI GLC + ++
Sbjct: 231 PSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDL 290
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE+ G + ++Y L++ LCK Q A+ LL
Sbjct: 291 IDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLL 326
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 63/83 (75%)
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+LG+M+ AFS+ AKILK G+ P TITF TLI G+CLN + K AL FHD +LA LNQV
Sbjct: 32 NLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQV 91
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y ILINGLCK+G+T AL+ LR
Sbjct: 92 TYAILINGLCKMGKTTEALQFLR 114
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A + + + QM P +N ++ K K + A SL ++M RGI P+ VT + L
Sbjct: 229 NKAKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSL 288
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S A+ ++ ++ G +P+ T+ +LI LC N V QGI
Sbjct: 289 IDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVD-----------QGI 337
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
QL+ +Y ILI+GLCK G+ + A
Sbjct: 338 QLDMYTYNILIDGLCKQGRLKDA 360
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
L +A L+++++ + +P ++ FN ++ A L H+M + I P++ T
Sbjct: 138 EKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYT 197
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKR-----------------GYKPNTITFTTLIKGL 131
NIL++ C G + A ++LA ++K+ G P+ ++ +I G
Sbjct: 198 FNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGVPPDAQSYNIMINGF 257
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
C V A +E+ +GI N V+Y LI+GLCK+G+ A L+
Sbjct: 258 CKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELV 305
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ N I+ L K K + A L QM + I PD+VT N LI +C +GQ+ AF +
Sbjct: 124 NVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGLF 183
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV------------ 157
+++ + PN TF L+ LC VK A ++ Q ++N+
Sbjct: 184 HEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGV 243
Query: 158 -----SYGILINGLCKVGQTRAALRLL 179
SY I+ING CK+ A L
Sbjct: 244 PPDAQSYNIMINGFCKIKMVNEAFSLF 270
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
SS H+H+ A +F ++L++ H P+ I FN ++ + + A+ M
Sbjct: 26 SSPHNHNLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHV 85
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ VT ILIN C +G+ + A L KI + N + T+I LC V A
Sbjct: 86 FHLNQVTYAILINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAY 145
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +++ + I + V++ LI G C VGQ A L
Sbjct: 146 ELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGLF 183
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ N+A LFN + +P+ + ++ ++ L K S A L +M G PDI T N
Sbjct: 262 MVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYN 321
Query: 91 ------------------------ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTT 126
ILI+ C G++ A + +L +GY T+T
Sbjct: 322 SLIDALCKNHHVDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTI 381
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+I GLCL + A ++ G + V+ +I L + + A +LLR
Sbjct: 382 MINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLR 435
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
MEF+GI PDIVT+NILIN YCHL QM+ AFS+ KILK GY PN IT TTL+K LCLN
Sbjct: 1 MEFQGIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGD 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
V++AL FH+ ++ + ++ I I+ C G + A +L
Sbjct: 61 VQKALHFHENIVNPDV----CTFNIFIDEFCLQGNMKEAKNIL 99
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF ++L+M + P+II +L L A+ + + PD+ T NI I+
Sbjct: 29 AFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKALHFHENI----VNPDVCTFNIFID 84
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G M A ++L ++ +G KPN +T++ L+ G CL + V +A + ++A G+
Sbjct: 85 EFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAK 144
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y I+ING CK AL L
Sbjct: 145 DVHNYNIVINGFCKSKMMDEALDLFE 170
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N + + +HT + +N ++ K+K A+ L +M + I+
Sbjct: 119 DGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNII 178
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P IVT N +I+ C G++S A+ ++ ++ G + IT+ + + C N Q+ +A+
Sbjct: 179 PTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIAL 238
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E+ QGIQ++ + +LI+GL K G+ + A ++ +
Sbjct: 239 VKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFK 275
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P+I+ +N ++ L K+ S A L +M G D +T N
Sbjct: 163 DEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPADEITYNSF 222
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C Q+ A +++ +I +G + + T + LI GL ++K A Q +LL +G
Sbjct: 223 LHTFCKNHQLDKAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIFKDLLIKGY 282
Query: 153 QLNQVSYGILINGLC 167
++ V+Y +I+GLC
Sbjct: 283 NVDVVTYKYMISGLC 297
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 87/147 (59%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ + +M P+ + F ++ K +A+ M+ RGI PD++T N LI
Sbjct: 314 EANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALI 373
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + A +L +++ G+KP+ ITFTTL+ G C + + AL+ D ++ +GI+
Sbjct: 374 NGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIE 433
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
L+ V++ LI+GLC+ G+ R A R+L+
Sbjct: 434 LDDVAFTALISGLCRDGRVRDAERMLK 460
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+ + + PS++ FN +++ ++K+ L ME I PD+ T + LI
Sbjct: 244 NARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALI 303
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C ++ A + ++ + G PN +TFTTLI G C + ++ AL+ + + +GI+
Sbjct: 304 NGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIR 363
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LINGLC+ G + A +LL
Sbjct: 364 PDLITYNALINGLCRDGDLKEARKLL 389
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 46 RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVA 105
R +P + ++ ++ L K A L +M G++P+ VT LI+ C G++ +A
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLA 350
Query: 106 FSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
+ RG +P+ IT+ LI GLC + +K A + +E++ G + +++++ L++G
Sbjct: 351 LRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDG 410
Query: 166 LCKVGQTRAALRL 178
CK G +AL +
Sbjct: 411 CCKDGDMDSALEI 423
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+L + P++ FN ++ K A + ++ RG+ P +V+ N LI+ YC
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ F + + + P+ T++ LI GLC +V+ A DE+ G+ N V++
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335
Query: 161 ILINGLCKVGQTRAALR 177
LI+G CK G+ ALR
Sbjct: 336 TLIDGQCKHGKIDLALR 352
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L N ++ P I F ++ K A+ + +M GI D V LI
Sbjct: 384 EARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALI 443
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ A +L +L G+KP+ T+T +I C VK + E+ G
Sbjct: 444 SGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRV 503
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
V+Y L+NG CK GQ + A LL
Sbjct: 504 PGVVTYNALMNGFCKQGQMKNAKMLL 529
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 67/140 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ + +R+++ + F +++ L + A + M G PD T ++
Sbjct: 418 DSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMV 477
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+C+C G + + +L ++ + G P +T+ L+ G C Q+K A +L +
Sbjct: 478 IDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEV 537
Query: 153 QLNQVSYGILINGLCKVGQT 172
N +++ IL++G CK G +
Sbjct: 538 VPNDITFNILLDGHCKHGSS 557
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA + +L H P + ++ K + L +M+ G +P +VT N L+
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C GQM A +L +L PN ITF L+ G C + F+ E +G+
Sbjct: 514 NGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGE---KGLV 570
Query: 154 LNQVSYGILINGLCKVGQTR 173
+ SY L+N K+ + +
Sbjct: 571 SDYASYTALVNESIKISKDQ 590
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ R +P + +N +++ AI L ++M I PD+ T NIL
Sbjct: 59 NDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNIL 118
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G+M A +VLA ++K+G KPN +T++ L+ G CL +V +A + + G+
Sbjct: 119 VDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGV 178
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ILINGLCK+ T A+ L
Sbjct: 179 NPDIHSYSILINGLCKIKMTDEAMNLFE 206
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I ++ ++ L K K A++L +M R I+PD+VT N L
Sbjct: 164 NKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C LG++S A ++ ++ RG P+ IT+++++ LC N QV +A+ +L QGI
Sbjct: 224 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 283
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N +Y ILI+GLCK G+ A
Sbjct: 284 RPNMYTYTILIDGLCKGGRLDDA 306
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++A+ LF + + P ++ +N ++ L K S A+ L +M RG+ PDI+T +
Sbjct: 197 MTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYS 256
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ C Q+ A ++L K+ +G +PN T+T LI GLC ++ A ++LL +
Sbjct: 257 SILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVK 316
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + +Y ++I+G C G AL LL
Sbjct: 317 GYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ P+++ ++ ++ K + A S+ + M G+ PDI + +ILIN C +
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
A ++ ++ R P+ +T+ +LI GLC ++ AL+ DE+ +G+ + ++Y
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 162 LINGLCKVGQTRAALRLL 179
+++ LCK Q A+ LL
Sbjct: 258 ILDALCKNHQVDKAIALL 275
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 66/128 (51%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + P +V N +I+ C ++ AF + ++
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ T+ LI G C+ ++K A+ +++ + I + ++ IL++ CK G+
Sbjct: 68 MVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGK 127
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 128 MKEAKNVL 135
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D V+ LIN C +G+ A +L ++ + +P+ + + T+I G+C + V A +
Sbjct: 6 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLY 65
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E++++ I + +Y LI+G C VG+ + A+ L
Sbjct: 66 SEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFN 101
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P II ++ IL L K AI+L +++ +GI P++ T ILI+ C G++ A ++
Sbjct: 250 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNI 309
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+L +GY T+T +I G C AL ++ N ++Y I+I L
Sbjct: 310 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSL 367
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G L+QVSYG LINGLCKVG+TRAAL+LLR
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLR 31
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ ++ R +P + +N +++ AI L ++M I PD+ T NIL
Sbjct: 59 NDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNIL 118
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G+M A +VLA ++K+G KPN +T++ L+ G CL +V +A + + G+
Sbjct: 119 VDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGV 178
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ILINGLCK+ T A+ L
Sbjct: 179 NPDIHSYSILINGLCKIKMTDEAMNLFE 206
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I ++ ++ L K K A++L +M R I+PD+VT N L
Sbjct: 164 NKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG P+ IT+++++ LC N QV +A+ L QGI
Sbjct: 224 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGI 283
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N +Y ILI+GLCK G+ A
Sbjct: 284 RPNMYTYTILIDGLCKGGRLEDA 306
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++A+ LF + + P ++ +N ++ L K+ S A+ L +M RG+ PDI+T +
Sbjct: 197 MTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYS 256
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ C Q+ A ++L + +G +PN T+T LI GLC +++ A ++LL +
Sbjct: 257 SILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 316
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + +Y ++I+G C G AL LL
Sbjct: 317 GYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 75/138 (54%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ P+++ ++ ++ K + A S+ + M G+ PDI + +ILIN C +
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
A ++ ++ R P+ +T+ +LI GLC + ++ AL+ DE+ +G+ + ++Y
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 162 LINGLCKVGQTRAALRLL 179
+++ LCK Q A+ LL
Sbjct: 258 ILDALCKNHQVDKAIALL 275
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P II ++ IL L K AI+L ++ +GI P++ T ILI+ C G++ A ++
Sbjct: 250 PDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 309
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GY T+T +I G C AL ++ N ++Y I+I L
Sbjct: 310 FEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFD 369
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 370 KDENDKAEKLLR 381
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 66/128 (51%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + P +V N +I+ C ++ AF + ++
Sbjct: 8 VSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ + P+ T+ LI G C+ ++K A+ +++ + I + ++ IL++ CK G+
Sbjct: 68 MVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGK 127
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 128 MKEAKNVL 135
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G D V+ LIN C +G+ A +L ++ + +P+ + + T+I G+C + V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ E++++ I + +Y LI+G C VG+ + A+ L
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLF 100
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G L+QVSYG LINGLCKVG+TRAAL+LLR
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLR 31
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
M AFS+ KILK G++P+ ITF TLIKGLC+N +VK AL FHD +++ G L+QVSYG
Sbjct: 1 MDFAFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGT 60
Query: 162 LINGLCKVGQTRAALRLLR 180
LINGLCK+G+T AL++LR
Sbjct: 61 LINGLCKMGKTTEALQVLR 79
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L +A L++ ++ R +P ++ F+ ++ A L H+M + I PD+ T
Sbjct: 104 KLVTEAYVLYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTF 163
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
NIL++ +C G A +V+A ++K G P+ +T+ +L+ G CL ++V +A +
Sbjct: 164 NILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISR 223
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+ING CK+ AL L
Sbjct: 224 MGLTPNANSYNIIINGFCKIKMVDEALNLFN 254
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D CL N++ + +H TP+ +N I+ K K A++L ++M RGI
Sbjct: 203 DGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIA 262
Query: 84 PD----------IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
PD ++T N ++ C Q+ A + + KI G +P T+ LI GLC
Sbjct: 263 PDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCK 322
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++ A +LL +G ++ +Y I+INGLC G A+ LL
Sbjct: 323 EVRLENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAMILLE 369
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF ++L++ P II FN ++ L A+ + G D V+ LIN
Sbjct: 4 AFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLIN 63
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G+ + A VL KI + + + ++T+I LC + V A + E++ + I
Sbjct: 64 GLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISP 123
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI G C VGQ + A L
Sbjct: 124 DVVTFSALIYGFCIVGQLKEAFGLF 148
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ ++ I+ L K K + A L +M + I PD+VT + LI +C +GQ+ AF +
Sbjct: 89 DVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGLF 148
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + P+ TF L+ C K A ++ +G+ + V+YG L++G C V
Sbjct: 149 HEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLV 208
Query: 170 GQTRAALRLL 179
+ A +L
Sbjct: 209 NKVNKAKHVL 218
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ ++ P + FN ++ K + A ++ M G++PD+VT L+
Sbjct: 143 EAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLM 202
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI- 152
+ YC + +++ A VL+ I + G PN ++ +I G C V AL +E+ +GI
Sbjct: 203 DGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIA 262
Query: 153 ---------QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y ++ LCK Q A+ ++
Sbjct: 263 PDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVK 299
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
++I +N L L K AI+ +++ GI P I T NILI+ C ++ A +
Sbjct: 273 ANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVI 332
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +GYK T+ +I GLCL +A+ +++ G + V+Y +I L K
Sbjct: 333 FQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFK 392
Query: 169 VGQTRAALRLLR 180
+ A +LLR
Sbjct: 393 NDENDRAEKLLR 404
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 22 SSLHSHSRSLPND-AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
S LH+ ++ D A+ ++ P I +N ++ L K A + + +
Sbjct: 280 SFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIK 339
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G + T NI+IN C G A +L K+ + G P+ +T+ T+I+ L ND+ RA
Sbjct: 340 GYKVTVWTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFKNDENDRA 399
Query: 141 LQFHDELLAQGI 152
+ E++A+G+
Sbjct: 400 EKLLREMIARGL 411
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 57/70 (81%)
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
KILK GY+P+TIT TT IKG CL Q+ +AL FHD+++A G L+QVSYG LINGLCKVG
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 171 QTRAALRLLR 180
+T+AAL LLR
Sbjct: 313 ETKAALELLR 322
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 85/148 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ + R P + +N +++ AI L ++M + I+PD+ T +IL
Sbjct: 350 NDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSIL 409
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G + A +VLA ++K+ KP+ +T+++L+ G CL ++V +A + + +G+
Sbjct: 410 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 469
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N SY I+ING CK+ A++L +
Sbjct: 470 TANVQSYNIMINGFCKIKMVDEAMKLFK 497
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 84/147 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P +I ++ ++ L K+ S A+ L +M +RG PDI+T N +
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A ++L K+ +G +P+ T+T L+KGLC + +++ A + ++LL +G
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y ++I G C G AL LL
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALL 636
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDAV LF RLL+ TP IEF KIL LVK+KHY +SLS +MEF+GI + + NIL
Sbjct: 92 NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151
Query: 93 INCYCHLGQMSVAFSVLAK 111
IN +C LG + AFSVL +
Sbjct: 152 INSFCQLGLIPFAFSVLTR 170
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + T ++ +N ++ K K A+ L +M + I PD++T + L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG +P+ IT+ +++ LC V +A+ +L QGI
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +Y IL+ GLC+ G+ A ++
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFE 602
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II +N IL L K H AI+L +++ +GI PD+ T IL+
Sbjct: 527 ALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVK 586
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A V +L +GY + +T +I+G C AL ++ G
Sbjct: 587 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 646
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y I+I L + + A +LLR
Sbjct: 647 DAKTYEIIILSLFEKDENDMAEKLLR 672
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 71/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ ++ ++ + A S+ + M RG+ ++ + NI+IN +C + + A +
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + P+ IT+++LI GLC + ++ AL+ DE+ +G Q + ++Y +++ LCK
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555
Query: 169 VGQTRAALRLL 179
A+ LL
Sbjct: 556 KHHVDKAITLL 566
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 71/140 (50%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
++++ M + + ++ L K A+ L + + + + PD+V N +I+ C
Sbjct: 287 DKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKD 346
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ AF + ++ + + P+ T+ LI G C+ ++K A+ +++ ++ I + ++
Sbjct: 347 KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTF 406
Query: 160 GILINGLCKVGQTRAALRLL 179
IL++G CK G + A +L
Sbjct: 407 SILVDGFCKDGNIKEAKNVL 426
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 40 NRLLQMRHTPSI-IEFNKILTP---LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
+RL + H+ I IE++K L+K+ SI + ++ G PD +TL I
Sbjct: 214 SRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILK-NGYEPDTITLTTFIKG 272
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C GQ+ A K++ G+ + +++ TLI GLC + K AL+ + +Q +
Sbjct: 273 FCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD 332
Query: 156 QVSYGILINGLCKVGQTRAALRL 178
V Y +I+G+CK A L
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDL 355
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 35 AVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
A C LF+ + + + P I+ + ++ + K+ A + ++M +G+ PD VT LI
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G+M AFSV +++++G PN +T+T L GLC N ++ A + E+ +G+Q
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y ++NGLCK+G ++L+
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLME 511
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + + +++ K + S A L +M + I+PDIVT +I+ C G+M A +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L +G +P+ +T+T LI G C ++K A H++++ +G+ N V+Y L +GLCK
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 169 VGQTRAALRLL 179
G+ A LL
Sbjct: 465 NGEIDVANELL 475
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 78/147 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + N+++Q TP+++ + + L K +A L H+M +G+ P++ T N ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C +G + ++ ++ G+ P+TIT+TTL+ C ++ +A + +L + +Q
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
V++ +L+NG C G RL+
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIE 581
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 78/147 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +L P + + ++ K A S+ +QM +G+ P++VT L
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ VA +L ++ ++G +PN T+ T++ GLC +++ ++ +E+ G
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFY 519
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y L++ CK+G+ A LLR
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLR 546
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N I+ L K A L M G+ PD V +I+ +C LG +S A +
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ ++ P+ +T+T++I G+C + ++ A + +E+L +G++ ++V+Y LI+G CK
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429
Query: 169 VGQTRAALRL 178
G+ + A +
Sbjct: 430 AGEMKEAFSV 439
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N I+ L K + + L +M+ G PD +T L++ YC +G+M+ A +
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +L + +P +TF L+ G C++ ++ + + +L +GI N ++ L+ C
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604
Query: 169 VGQTRAALRLLR 180
RA + +
Sbjct: 605 KNNMRATTEIYK 616
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L R P+++ FN ++ + L M +GIMP+ T N L+ YC
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
M + + RG P++ T+ LIKG C +K A H E++ +G + +Y
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667
Query: 162 LINGLCKVGQTRAALRLLR 180
LI G K + A +L
Sbjct: 668 LIRGFYKRKKFVEARKLFE 686
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I + ++ K + A L M + + P +VT N+L+N +C G + +
Sbjct: 520 PDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +L++G PN TF +L+K C+ + ++ + + + +G+ + +Y ILI G CK
Sbjct: 580 IEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK 639
Query: 169 VGQTRAALRL 178
+ A L
Sbjct: 640 ARNMKEAWFL 649
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPL-VKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A LF++LL+ S+ N L+ L + IA+ + + G+ + V+ NI+
Sbjct: 189 EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIV 248
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++C C LG++ A ++L ++ RG P+ +++ ++ G C ++ + L+ DEL +G+
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ Y +I LCK G+ A +LLR
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLR 336
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV +F ++ + + N +L L + A +L QM RG PD+V+ ++++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC +G++ ++ ++ +G KP+ + +I LC N +V A Q + G+
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V Y +I+G CK+G AA +L
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLF 370
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 71 ISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
+ L +++ +G+ PD N +I C G++ A +L + K G P+ + +TT+I G
Sbjct: 297 LKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISG 356
Query: 131 LCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
C V A + DE+ + I + V+Y +I+G+CK G+ A +
Sbjct: 357 FCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D L +L+ P+ FN ++ + + M RG+MPD T NIL
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNIL 633
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C M A+ + +++++GY T+ LI+G + A + +E+ G+
Sbjct: 634 IKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGL 693
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ Y I ++ + G L L
Sbjct: 694 VAEKDIYDIFVDVNYEEGNWEITLEL 719
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 83/150 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R + +N +++ + AI L ++M I PD+ T N
Sbjct: 14 LVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAENINPDVYTFN 73
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A +VLA ++K KP +T+++L+ G CL ++V +A + D + A+
Sbjct: 74 ILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKAKEIFDSMAAR 133
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY +ING CK+ A+ L
Sbjct: 134 GVMANVQSYTTMINGFCKIKMVDEAINLFE 163
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 35/181 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LFN++ P + FN ++ K A ++ M I P +VT + L
Sbjct: 51 NDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSL 110
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTT-------------------------- 126
++ YC + +++ A + + RG N ++TT
Sbjct: 111 MDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKI 170
Query: 127 ---------LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
LI GLC + ++ AL+ DE+ +G N V Y +++ LCK + A+
Sbjct: 171 IRNVLIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQAIA 230
Query: 178 L 178
L
Sbjct: 231 L 231
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 83/150 (55%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+A L++ ++ +P ++ ++ +++ AI L ++M I PD+ T N
Sbjct: 57 LVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 116
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G+M +V A ++K+G KPN +T+ +L+ G CL QV +A + +
Sbjct: 117 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG 176
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ + SY I+ING CK+ + A+ L +
Sbjct: 177 GVNPDTQSYNIMINGFCKIKKVDEAMNLFK 206
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 8/155 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P +N ++ K K A++L +M + I+P++VT L
Sbjct: 164 NKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL--------QFH 144
I+ C G++S A ++ ++ RG P+ IT+++++ LC N QV +A+ Q
Sbjct: 224 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 283
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++L +G L+ +Y ++I G C G AL LL
Sbjct: 284 EDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 318
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 79/142 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P+++ + ++ K + A S+ + M G+ PD + NI+IN +C
Sbjct: 134 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 193
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A ++ K+ + PN +T+T+LI GLC + ++ AL+ DE+ +G+ + +
Sbjct: 194 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDII 253
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK Q A+ LL
Sbjct: 254 TYSSILDALCKNHQVDKAIALL 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 69/124 (55%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + P++V N +I+ C + ++ AF + ++
Sbjct: 8 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 67
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G P+ +T++ LI G + ++K A+ ++++ + I+ + ++ IL++G CK G+
Sbjct: 68 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 127
Query: 172 TRAA 175
+
Sbjct: 128 MKEG 131
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ P+++ + ++ L K+ S A+ L +M RG+ PDI+T + +
Sbjct: 199 DEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSI 258
Query: 93 INCYCHLGQMSVAFSVLAKI--------LKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++ C Q+ A ++L K+ +GY + +T +I+G C+ AL
Sbjct: 259 LDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 318
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ G + +Y I+I L K + A +LLR
Sbjct: 319 SKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLR 354
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D V+ LIN C +GQ A +L ++ + +PN + + T+I +C V A +
Sbjct: 6 DQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 65
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E++++GI + V+Y LI+G VG+ + A+ L
Sbjct: 66 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 100
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G L+QVSYG LINGLCKVGQ RAAL+LLR
Sbjct: 2 GFHLDQVSYGTLINGLCKVGQARAALQLLR 31
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 88/148 (59%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ + R +P+++ ++ +++ AI L ++M I P++ T +IL
Sbjct: 59 NDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSIL 118
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++ A +VLA ++K+G KP+ +T+++L+ G CL ++V +A + + +G+
Sbjct: 119 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 178
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N SY I+ING CK+ A++L +
Sbjct: 179 TANVQSYSIMINGFCKIKMVDEAMKLFK 206
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 84/149 (56%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++A+ LF + + P +I ++ ++ L K+ S A+ L +M RG PDI+T N
Sbjct: 197 MVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYN 256
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ C + A ++L K+ +G +P+ T+T L+KGLC + +++ A + ++LL +
Sbjct: 257 SILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVK 316
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G L+ +Y ++I G C G AL LL
Sbjct: 317 GYNLDVYAYTVMIQGFCDKGLFDEALALL 345
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + T ++ ++ ++ K K A+ L +M + I PD++T + L
Sbjct: 164 NKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSAL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG +P+ IT+ +++ LC V +A+ +L QGI
Sbjct: 224 IDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGI 283
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +Y IL+ GLC+ G+ A ++
Sbjct: 284 RPDMNTYTILVKGLCRSGKLEDARKVFE 311
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ I+ + K KH + A L +M + I P++VT + LI+ +C +G++ A + K++
Sbjct: 45 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 104
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
PN TF+ L+ G C +VK A ++ QGI+ + V+Y L++G C V +
Sbjct: 105 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 164
Query: 174 AA 175
A
Sbjct: 165 KA 166
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II +N IL L K H AI+L +++ +GI PD+ T IL+
Sbjct: 236 ALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVK 295
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A V +L +GY + +T +I+G C AL ++ G
Sbjct: 296 GLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 355
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y I+I L + + A +LLR
Sbjct: 356 DAKTYEIIILSLFEKDENDMAEKLLR 381
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 35/181 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN+++ P++ F+ ++ K A ++ M +GI PD+VT + L+
Sbjct: 95 DAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLM 154
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYK----------------------------------- 118
+ YC + +++ A S+ + RG
Sbjct: 155 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIF 214
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+ IT++ LI GLC + ++ AL+ DE+ +G Q + ++Y +++ LCK A+ L
Sbjct: 215 PDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIAL 274
Query: 179 L 179
L
Sbjct: 275 L 275
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + D V + +I+ C ++ AF + ++
Sbjct: 8 VSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSE 67
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ + PN +T++ LI G C+ ++K A+ ++++ + I N ++ IL++G CK G+
Sbjct: 68 MAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGR 127
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 128 VKEAKNVL 135
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G D V+ LIN C +G+ A +L ++ + + + + ++++I +C + V A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDA 61
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ E+ A+ I N V+Y LI+G C VG+ + A+ L
Sbjct: 62 FDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLF 100
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G L+QVSYG LINGLCKVG+TRAAL LLR
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLR 31
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN + Q P I +N ++ K K A++L +M R I+P++VT N L
Sbjct: 43 NKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSL 102
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++S A ++ ++ RG P+ IT+++L+ LC N +A+ +L QG+
Sbjct: 103 IDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGL 162
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q N +Y ILINGLCK G+ A +
Sbjct: 163 QPNMYTYTILINGLCKGGRPEDAQNIFE 190
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + + P+++ +N ++ L K+ S A+ L +M RG PDI+T + L++
Sbjct: 80 AMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLD 139
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C A ++L K+ +G +PN T+T LI GLC + + A ++LL +G +
Sbjct: 140 ALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNI 199
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N +Y ++I+ C G AL +L
Sbjct: 200 NVNTYTVMIHVFCNNGMFGEALAML 224
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C G++ A +V A ++K+G+KPN +T+++L+ G CL +V +A + + G+ +
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPD 60
Query: 156 QVSYGILINGLCKVGQTRAALRLLR 180
SY ILING CK+ T AA+ L
Sbjct: 61 IQSYNILINGFCKIKMTDAAMNLFE 85
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II ++ +L L K AI+L +++ +G+ P++ T ILIN
Sbjct: 115 ALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILIN 174
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+ A ++ +L +GY N T+T +I C N AL ++ G
Sbjct: 175 GLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIP 234
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y I+I L + A +LL
Sbjct: 235 NAVTYEIIIRSLFDKDENDKAEKLL 259
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 22 SSLHSHSRSLPND-AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
S L + ++ P D A+ L +L P++ + ++ L K A ++ + +
Sbjct: 136 SLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVK 195
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G ++ T ++I+ +C+ G A ++L+K+ + G PN +T+ +I+ L D+ +A
Sbjct: 196 GYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKA 255
Query: 141 LQFHDELLAQGI 152
+ E++ +G+
Sbjct: 256 EKLLLEMITRGL 267
>Medtr1g034440.1 | PPR superfamily protein | LC |
chr1:12539755-12540993 | 20130731
Length = 412
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME-------FRGIMPDIV 87
A+ +F+ +L SI +FN + + L+K L+ + E + + P+I
Sbjct: 68 AIRIFDLMLDYDGFYSISDFNFLFSSLIKKGCLLTVFQLAQRWEESLSRKCYDRVYPNID 127
Query: 88 TLNILINCYCHL--GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
T ILI+C+ G +S AFS+ +I++ G++P T T + +GLCL Q+ +A+ F++
Sbjct: 128 TWKILISCHSKKKSGNISFAFSLFHRIIEDGHRPTTSTLNDIFRGLCLRGQIYKAIMFYN 187
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +G QLN +Y I+I+GLCK+G+T+ A+ LR
Sbjct: 188 YTILKGFQLNLETYSIIIHGLCKIGETKKAIHFLR 222
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 85/146 (58%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L+++++ + P+I+ +N ++ K K A + + + ++P+++T N +I
Sbjct: 192 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 251
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G M FS+ + +L G PN T+ LI GLC ++ A + +E+ +G++
Sbjct: 252 DAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLK 311
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ILI+GLCK ++R A +LL
Sbjct: 312 GDVVTYNILIDGLCKNDKSRNAEKLL 337
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + +A +F+ + + P++I FN ++ K SL M GI+P++ T
Sbjct: 222 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 281
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI C + A +L ++ +G K + +T+ LI GLC ND+ + A + +E+
Sbjct: 282 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 341
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G++ N V+Y L++G C G+ +AAL +
Sbjct: 342 NLGLKPNHVTYNTLMDGYCMEGKLKAALNV 371
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D ++ +++ R ++ FN + L + + A M+ GI P++VT N L+
Sbjct: 49 DVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLV 108
Query: 94 NCYCH---LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ YC G+M A + + ++L PN +TF TLI G C ++ V A + +E+ Q
Sbjct: 109 DGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ 168
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G++ N V+Y LINGLC G+ A+ L
Sbjct: 169 GLKPNIVTYNSLINGLCNNGKLEEAIDL 196
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L + + A L ++ME +G+ D+VT NILI+ C + A +
Sbjct: 277 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 336
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G KPN +T+ TL+ G C+ ++K AL + + Q N V+Y +LI G CK
Sbjct: 337 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 396
Query: 169 VGQTRAALRLL 179
+ + AA LL
Sbjct: 397 INKLEAANGLL 407
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +L + P+ + FN ++ K ++ + A +M+ +G+ P+IVT N LIN
Sbjct: 123 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 182
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ G++ A + K++ G KPN +T+ LI G C +K A + D++ Q +
Sbjct: 183 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 242
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N +++ +I+ CK G L
Sbjct: 243 NVITFNTMIDAYCKEGMMEEGFSL 266
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F R S+ N +L+ LVK + +M R I ++ T NI IN C
Sbjct: 19 FTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCR 78
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQLN 155
G+++ A + + G PN +T+ TL+ G C ++ +A F E+LA I N
Sbjct: 79 AGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN 138
Query: 156 QVSYGILINGLCKVGQTRAALR 177
+V++ LI+G CK AA +
Sbjct: 139 EVTFNTLIDGFCKDENVAAAKK 160
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + ++ +N ++ L K A L ++M G+ P+ VT N L++ YC
Sbjct: 301 LLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC 360
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A +V ++ K +PN +T+ LIKG C ++++ A +E+L +G+ N+
Sbjct: 361 MEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRT 420
Query: 158 SYGIL 162
+Y I+
Sbjct: 421 TYDIV 425
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L++ + R P + +N +++ A L ++M + I P + T NIL
Sbjct: 59 NDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNIL 118
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G + A +VLA ++K+G PN +T+++L+ G CL ++V A + +G+
Sbjct: 119 VDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGV 178
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N SY I+ING CK+ T A+ L
Sbjct: 179 TANVWSYNIMINGFCKIKMTDEAMNLFE 206
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A +F+ + T ++ +N ++ K K A++L +M R ++PD+VT N L
Sbjct: 164 NNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++S A ++ ++ RG P+ IT+++L+ LC N QV +A+ L QGI
Sbjct: 224 INGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGI 283
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N +Y ILI+GLCK G+ A
Sbjct: 284 RPNMYTYTILIDGLCKGGRLEDA 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ++A+ LF + + P ++ +N ++ L K+ S A+ L +M RG PDI+T +
Sbjct: 197 MTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYS 256
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ C Q+ A ++L + +G +PN T+T LI GLC +++ A ++LL +
Sbjct: 257 SLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 316
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + +Y ++I+G C G AL LL
Sbjct: 317 GYNITVNTYTVMIHGFCNKGLFDEALALL 345
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P+ + ++ ++ + A + M RG+ ++ + NI+IN +C + A +
Sbjct: 144 NPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMN 203
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ ++ R P+ +T+ +LI GLC + ++ AL+ DE+ +G + ++Y L++ LC
Sbjct: 204 LFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALC 263
Query: 168 KVGQTRAALRLL 179
K Q A+ LL
Sbjct: 264 KNHQVDKAIALL 275
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II ++ +L L K AI+L ++ +GI P++ T ILI+
Sbjct: 236 ALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILID 295
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A ++ +L +GY T+T +I G C AL ++
Sbjct: 296 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFP 355
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y I+I L + A LLR
Sbjct: 356 NALTYEIIIRSLFDNDENDKAENLLR 381
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 64/128 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ L +++ + + PD+V N +I+ C ++ AF + ++
Sbjct: 8 VGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE 67
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ + P+ T+ LI G C+ ++K A +++ ++ I ++ IL++ CK G
Sbjct: 68 MASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGN 127
Query: 172 TRAALRLL 179
+ A +L
Sbjct: 128 VKEAKNVL 135
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G D V LIN C +G+ A +L ++ + +P+ + + T+I G+C + V A
Sbjct: 2 GFHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDA 61
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E+ ++ I + +Y LI+G C VG+ + A L
Sbjct: 62 FDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFN 101
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 84/146 (57%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV + +++ P ++ ++ +++ + A + +M + I+PD VT + LI
Sbjct: 422 EAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLI 481
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C ++S AF + ++L RG P+ +T+TTL+ G C+ ++ +AL HDE++ +G
Sbjct: 482 QGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFL 541
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +LINGL K +TR A +LL
Sbjct: 542 PDVVTYSVLINGLNKKARTREAKKLL 567
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 83/150 (55%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ L N+A + + ++ PS++ +N ++ A+ + M RG+ PD+V+
Sbjct: 382 QGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVS 441
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ +I+ +C G++ AF + +++++ P+ +T+++LI+GLC ++ A E+L
Sbjct: 442 YSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEML 501
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+G+ ++V+Y L+NG C G+ AL L
Sbjct: 502 GRGLSPDEVTYTTLMNGYCVEGELSKALDL 531
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P + +N ++ K ++ A+ L H+M +G+ P++VT LIN C + +S A
Sbjct: 296 SPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAME 355
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L+ + RG PN T+TTL+ G C + A + E++ G + V+Y L+NG C
Sbjct: 356 ILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFC 415
Query: 168 KVGQTRAALRLLR 180
+G+ A+ +L+
Sbjct: 416 CLGRVEEAVGVLK 428
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L + R ++I +N ++ L + + + +M +G+ PD VT N L
Sbjct: 246 DEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTL 305
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N +C G A +L ++ +G PN +T+TTLI G+C + RA++ + +G+
Sbjct: 306 VNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGL 365
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N+ +Y L++G C+ G A ++L
Sbjct: 366 SPNERTYTTLVDGFCRQGLMNEAYKVL 392
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 78/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ +P+I +N ++ +V + + ++ME +G +P++VT N +I+ YC
Sbjct: 181 VFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYC 240
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ AF +L + + + N I++ +I GLC ++ ++ +E+ +G+ + V
Sbjct: 241 KENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCV 300
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y L+NG CK G AL LL
Sbjct: 301 TYNTLVNGFCKDGNFHQALVLL 322
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N +++ K A L M + + ++++ N +IN C G+M+ V
Sbjct: 227 PNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGRMNETMEV 286
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ +G P+ +T+ TL+ G C + +AL E+ +G+ N V+Y LING+CK
Sbjct: 287 IEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCK 346
Query: 169 VGQTRAALRLL 179
V A+ +L
Sbjct: 347 VKNLSRAMEIL 357
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 75/131 (57%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+++ + ++ + K K+ S A+ + M RG+ P+ T L++ +C G M+ A+
Sbjct: 331 SPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYK 390
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
VL++++ G+ P+ +T+ L+ G C +V+ A+ +++ +G+ + VSY +I+ C
Sbjct: 391 VLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFC 450
Query: 168 KVGQTRAALRL 178
+ G+ A ++
Sbjct: 451 RNGELGKAFQM 461
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+++ R P + ++ ++ L + S A L +M RG+ PD VT L+N YC G
Sbjct: 464 EMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEG 523
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-----FHDELLAQGIQLN 155
++S A + +++++G+ P+ +T++ LI GL + + A + F+DE + N
Sbjct: 524 ELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVP-----N 578
Query: 156 QVSYGILINGLCKVGQTRAALRLLR 180
V+Y LI C + ++ + L++
Sbjct: 579 DVTYETLIEN-CSGNEFKSVVGLVK 602
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF +L +P + + ++ S A+ L +M +G +PD+VT ++L
Sbjct: 491 SEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVL 550
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI---------------KGLCLNDQV 137
IN + A +L K+ PN +T+ TLI KG C+ +
Sbjct: 551 INGLNKKARTREAKKLLLKLFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGLM 610
Query: 138 KRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
A + + + + + + Y ++I+G C+ G R A +
Sbjct: 611 DEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNM 651
>Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:6327520-6326399 | 20130731
Length = 373
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 94/162 (58%), Gaps = 12/162 (7%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME--------FR 80
+S P AV LF L + P I +N IL+ L++ +SL+ Q+E ++
Sbjct: 42 KSWPT-AVSLFESTLSVGCYP-ISHYNFILSSLLQLGRSETVVSLAQQLEEVKYRNNIYK 99
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
++PDI T +ILI C+C G MS A + I+K G+ P++ T + G C ++ +A
Sbjct: 100 RVLPDIHTWSILITCHCFHGNMSSAICLFNNIIKTGHPPSSETLYDIFDGFCRIGKIHKA 159
Query: 141 LQFHDEL-LAQGIQLNQVSYGILINGLCKV-GQTRAALRLLR 180
+ F++++ L QG QL+ +Y ILI G+C++ G+T+ A++LLR
Sbjct: 160 ILFYNDIVLKQGFQLDNRTYSILIQGVCEIGGETQIAIQLLR 201
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F L H P ++ FN ++ L K ++ A L H++ RG+ P +VT N+ I+
Sbjct: 574 AMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFID 633
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+C G + A + L ++ K P+ +T+TTL+ G C ++ A+ E+ G
Sbjct: 634 CWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPP 693
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
NQ+++ LI GLCK + AL LR
Sbjct: 694 NQITFMALIYGLCKCCRPTEALCYLR 719
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 31 LPND----AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
L ND A+ LFN + + P+I+ +N ++ L K+ + L +M+ GI P
Sbjct: 426 LKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTH 485
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
T N + C C +S A +L ++ G+ P T L+K LC + +V A +F D
Sbjct: 486 FTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDN 545
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ QG + VSY I GL + + A+++ +
Sbjct: 546 MTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFK 579
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L H R + +A + + Q P I+ ++ + LV + A+ + + G
Sbjct: 529 ELCDHGRVI--EACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGH 586
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD+V N+LI C + + + A + +++KRG P+ +T+ I C N V +A+
Sbjct: 587 CPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMA 646
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + V+Y L++G CK + A+ L +
Sbjct: 647 HLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFK 684
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSI---IEFNK-ILTPLVKT----KHYSIAISLSHQ 76
+SH+ L + C L++MR EF+K LTP++ T + + A+S+ +
Sbjct: 151 YSHNTLLEVISKCGLVDLMEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKE 210
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +G + + V +++ C+ LG++ AF ++ ++ + G + + TF LI G +
Sbjct: 211 MEEKGWVDERVC-SMMALCFSKLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESR 269
Query: 137 VKRALQFHDELLAQGIQLNQVS-YGILINGLCKVGQTRAALRLL 179
V +ALQ D++ + VS Y +LI GLCK T A+ L
Sbjct: 270 VDKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLF 313
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF+ L PS++ +N ++ +T + IA + M G+ PD+VT IL+
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C +G + +A + ++L RG KP+ I +TT I G +A +E+ A+G
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y +LINGLCK+G A L++
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQ 511
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ A + + P +I +N ++ L K ++ A L +M GI+PD VT
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ + G + A V + +LK+G P+ +T+T LI + ++ A ++ DE+ +G
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ N ++Y LI GLCK A L
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLF 615
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 70/128 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ + +++ A+ L ++ + ++P +VT N LI+ C G + +A +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++K G P+ +TFT L++G C + A + DE+L++G++ + ++Y I G K
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 169 VGQTRAAL 176
+G A
Sbjct: 465 LGNPSKAF 472
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ L + S A M +MPD+V+ N LI Y LG + A +
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLL 369
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ + P+ +T+ TLI G C + A D+++ G+ + V++ IL+ G C+
Sbjct: 370 FSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQ 429
Query: 169 VGQTRAALRLL 179
+G A L
Sbjct: 430 MGNLPMAKELF 440
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+S+ N+ +++ +++ + P+I+ FN ++ K A+ + M G P+ V
Sbjct: 184 DKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV 243
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N+L+N G+ A ++ ++ G K + T+ LI+G C + + A E+
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREM 303
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L +G V+Y ++ LC++G+ A R L
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGRVSDARRYL 335
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 22 SSLHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
S +H+H S L A +F+ +L+ PS++ + ++ A +M+ +
Sbjct: 527 SIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ P+++T N LI C M VA+++ A++ +G PN T+T LI + A
Sbjct: 587 GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDA 646
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
L+ + ++L + I+ + ++ L+ L K + A LRL
Sbjct: 647 LKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ K + + A L +M RG +P +VT N ++ C LG++S A L ++
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMV 339
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
P+ +++ TLI G AL EL ++ + + V+Y LI+G C+ G
Sbjct: 340 NEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLD 399
Query: 174 AA 175
A
Sbjct: 400 IA 401
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + +N ++ L + A L QM G+ T N LI +C A +
Sbjct: 240 PNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L RG P +T+ T++ LC +V A ++ D ++ + + + VSY LI G +
Sbjct: 300 RREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSR 359
Query: 169 VGQTRAALRLL 179
+G AL L
Sbjct: 360 LGNFAEALLLF 370
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
++M G++PD+ N ++ ++ V + ++K +P +TF T++ C
Sbjct: 161 YKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKE 220
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+V RA++ D + G N VSY +L+NGL G+ A L+
Sbjct: 221 GEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIE 266
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 92.0 bits (227), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 86/146 (58%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L+++++ + P+I+ +N ++ K K A + + + ++P+++T N +I
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMI 385
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G M FS+ + +L+ G PN T+ LI GLC ++ A + +E+ +G++
Sbjct: 386 DAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLK 445
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ILI+GLCK ++R A +LL
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLL 471
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +L+ P++ + ++ L + + A L ++ME +G+ D+VT NILI+ C
Sbjct: 400 LCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 459
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A +L ++ G KPN +T+ TL+ G C+ ++K AL + + Q N V
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVV 519
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +LI G CK+ + AA LL
Sbjct: 520 TYNVLIKGYCKINKLEAANGLL 541
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D ++ +++ R ++ FN + L + + A M+ GI P +VT N L+
Sbjct: 183 DVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLV 242
Query: 94 NCYCH---LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ YC G+M A + + ++L PN +TF TLI G C ++ V A + +E+ Q
Sbjct: 243 DGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ 302
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G++ N V+Y LINGLC G+ A+ L
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F + + P+I+ +N ++ L AI L +M G+ P+IVT N LIN +C
Sbjct: 296 FEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
M A VL + K+ PN ITF T+I C ++ +L +GI N +
Sbjct: 356 KKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVST 415
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y LI GLC+ +AA LL
Sbjct: 416 YKCLIAGLCRKQDLQAAKELL 436
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 48 TPSIIEFNKILTPLVKT----KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+P ++ +N ++ K K Y A + +M I P+ VT N LI+ +C ++
Sbjct: 232 SPKVVTYNTLVDGYCKRGSAGKMYK-AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
A ++ K+G KPN +T+ +LI GLC N +++ A+ D+++ G++ N V+Y LI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350
Query: 164 NGLCKVGQTRAALRLL 179
NG CK + A ++L
Sbjct: 351 NGFCKKKMMKEATKVL 366
Score = 77.0 bits (188), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +L + P+ + FN ++ K ++ + A +M+ +G+ P+IVT N LIN
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ G++ A + K++ G KPN +T+ LI G C +K A + D++ Q +
Sbjct: 317 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVP 376
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N +++ +I+ CK G L
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSL 400
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 63/112 (56%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ +N ++ L K A L ++M G+ P+ VT N L++ YC G++ A +V
Sbjct: 448 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRK 507
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
++ K +PN +T+ LIKG C ++++ A +E+L +G+ N+ +Y I+
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +L+ LVK + +M R I ++ T NI IN C G+++ A + +
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228
Query: 115 RGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
G P +T+ TL+ G C ++ +A F E+LA I N+V++ LI+G CK
Sbjct: 229 WGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288
Query: 172 TRAA 175
AA
Sbjct: 289 VAAA 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + + P+ + +N ++ A+++ +ME P++VT N+LI YC
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYC 529
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITF 124
+ ++ A +L ++L++G PN T+
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTY 556
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R P + +N ++ AI L ++M I PD+ T N
Sbjct: 256 LDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 315
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ +C G++ A + LA ++K+G KP+ +T+ +L+ CL ++V +A + + +
Sbjct: 316 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHR 375
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+IN CK+ A++L +
Sbjct: 376 GVTANVRSYSIMINRFCKIKMVDQAMKLFK 405
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LFN++ P + FN ++ K A + M +GI PD+VT N L+
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC + +++ A S+ + RG N +++ +I C V +A++ E+ + I
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
N ++Y LI+GLCK G+ AL L
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALEL 438
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+LLQ P+++ +N I+ + K K + A L +M + I PD+ T N LIN +C +G
Sbjct: 235 KLLQ----PNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVG 290
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A + K+ P+ TF L+ C +VK A ++ QGI+ + V+Y
Sbjct: 291 KLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYN 350
Query: 161 ILINGLCKVGQTRAA 175
L++ C V + A
Sbjct: 351 SLMDRYCLVNEVNKA 365
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ LF + + P++I ++ ++ L K+ S A+ L+ +M RG PDI+TL
Sbjct: 398 DQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLT-- 455
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +G +PN T+T LI GLC +++ A ++LL +G
Sbjct: 456 -----------------RQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGY 498
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ++I+G C G A+ LL
Sbjct: 499 NITVNTYTVMIHGFCNKGLFDEAMTLL 525
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 91.7 bits (226), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 85/146 (58%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L+++++ + P+I+ +N ++ K K A + + + ++P+++T N +I
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G M FS+ + +L G PN T+ LI GLC ++ A + +E+ +G++
Sbjct: 386 DAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLK 445
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ILI+GLCK ++R A +LL
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLL 471
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + +A +F+ + + P++I FN ++ K SL M GI+P++ T
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI C + A +L ++ +G K + +T+ LI GLC ND+ + A + +E+
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMF 475
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G++ N V+Y L++G C G+ +AAL +
Sbjct: 476 NLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505
Score = 80.9 bits (198), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 72/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L + + A L ++ME +G+ D+VT NILI+ C + A +
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G KPN +T+ TL+ G C+ ++K AL + + Q N V+Y +LI G CK
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530
Query: 169 VGQTRAALRLL 179
+ + AA LL
Sbjct: 531 INKLEAANGLL 541
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D ++ +++ R ++ FN + L + + A M+ GI P++VT N L+
Sbjct: 183 DVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLV 242
Query: 94 NCYCH---LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ YC G+M A + + ++L PN +TF TLI G C ++ V A + +E+ Q
Sbjct: 243 DGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ 302
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G++ N V+Y LINGLC G+ A+ L
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +L + P+ + FN ++ K ++ + A +M+ +G+ P+IVT N LIN
Sbjct: 257 AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLIN 316
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ G++ A + K++ G KPN +T+ LI G C +K A + D++ Q +
Sbjct: 317 GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVP 376
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N +++ +I+ CK G L
Sbjct: 377 NVITFNTMIDAYCKEGMMEEGFSL 400
Score = 63.9 bits (154), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 63/112 (56%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ +N ++ L K A L ++M G+ P+ VT N L++ YC G++ A +V
Sbjct: 448 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRT 507
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
++ K +PN +T+ LIKG C ++++ A +E+L +G+ N+ +Y I+
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 63.9 bits (154), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ N +L+ LVK + +M R I ++ T NI IN C G+++ A +
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223
Query: 110 AKILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ G PN +T+ TL+ G C ++ +A F E+LA I N+V++ LI+G
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283
Query: 167 CKVGQTRAA 175
CK AA
Sbjct: 284 CKDENVAAA 292
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + + P+ + +N ++ A+++ +ME P++VT N+LI YC
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITF 124
+ ++ A +L ++L++G PN T+
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTY 556
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 91.7 bits (226), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 77/138 (55%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+L+ P + +N +++ K A + +M+ RG PD+VT NILI +C G+
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ +A V+ ++LK KP IT+T LI+ + A++ DE+L++G++ ++ +Y +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 162 LINGLCKVGQTRAALRLL 179
++NG+CK G A L
Sbjct: 257 VVNGMCKEGMLDRAFEFL 274
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 73/146 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++LL+ P++I + ++ + A+ L +M RG+ PD T N+++N
Sbjct: 200 ALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G + AF L++I K G T+ L++ L + + + ++L +G +
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y LI LC+ G+ A +L+
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLK 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
F K L K+ Y ++ M RG PD++ LI + ++ ++ A V+ +IL
Sbjct: 80 FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EIL 138
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
++ KP+ + +I G C D+V A + D + +G + + V+Y ILI C G+
Sbjct: 139 EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198
Query: 174 AALRLL 179
ALR++
Sbjct: 199 LALRVM 204
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +++ L + +AI M G +PDI++ N ++ C G A ++
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ + G PN ++ TL L + RAL E+L+ GI ++++Y LI+ LC+
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473
Query: 169 VGQTRAALRLL 179
G A+ LL
Sbjct: 474 DGLVDQAIELL 484
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++ H P I+ +N IL L K + A+++ ++ G P+ + N L
Sbjct: 375 AIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFG 434
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH-DELLAQGIQ 153
G A ++ ++L G P+ IT+ +LI LC + V +A++ D ++ Q
Sbjct: 435 ALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQ 494
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+SY ++ GLCKV + A+ +L
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVL 520
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 62/126 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N +L L+ + L M +G P+ +T + LI C G++ A +VL +
Sbjct: 289 YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMK 348
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
++ P+ ++ LI LC +V A++F D++++ G + +SY ++ LCK G
Sbjct: 349 EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNAD 408
Query: 174 AALRLL 179
AL +
Sbjct: 409 EALNIF 414
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ +R+ + P ++ +N ++ +A+ + Q+ P ++T ILI
Sbjct: 168 VLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATI 227
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L ++L RG +P+ T+ ++ G+C + RA +F + G
Sbjct: 228 TQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y IL+ L G+ +L+
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLM 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I ++ ++T L + A ++ M+ + + PD + + LI+ C G++ +A
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF 378
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G+ P+ +++ +++ LC N AL ++L G N SY L L
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWS 438
Query: 169 VGQTRAALRLL 179
G AL ++
Sbjct: 439 SGDKIRALGMI 449
>Medtr3g030490.1 | PPR superfamily protein, putative | LC |
chr3:9657702-9656824 | 20130731
Length = 222
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 64/108 (59%), Gaps = 17/108 (15%)
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
L Q EF GI P IVTL+IL+N YC+L M+ FS+LAKIL GY+ N IT TT KG+C
Sbjct: 11 LFRQFEFNGITPSIVTLSILMNFYCNLRGMNFFFSILAKILMMGYELNAITLTTFTKGMC 70
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L R +SY IL+NGLCK+ +TRA +++ R
Sbjct: 71 LKRSSSR-----------------MSYAILMNGLCKMWETRAVMQMPR 101
>Medtr5g008255.1 | ATP-binding; nucleic acid-binding; helicase,
putative | LC | chr5:1717378-1718334 | 20130731
Length = 250
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 67 YSIAISLSHQMEFRG----IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
Y+ IS + Q+E R + PDI T ILI C+ +M+ AFS+ K++K G+ P+T
Sbjct: 4 YTAVISHAQQLESRSDQIQVFPDIDTWKILITCHSRKCKMASAFSLFYKLIKSGHHPSTS 63
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T L GL L + + F++++L +G +L++ SY LI+GLCK+G+T A+ LLR
Sbjct: 64 TLNDLFHGLFLQGGMHKVFPFYNDVLLKGFKLDETSYYFLISGLCKIGETEKAIELLR 121
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+ ++A LF + P + +N ++ L K++ +M RG +I+T
Sbjct: 207 KMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITY 266
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N L++ C Q+ A ++L KI +G +PN T+T L+ GLC N +++ A + + +LL
Sbjct: 267 NSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLN 326
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G QL+ Y ++INGLCK G AL LL
Sbjct: 327 KGYQLDARIYTVMINGLCKEGFLDEALSLL 356
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LFN + TP++ + ++ L K K A +L +M + ++PD V N L
Sbjct: 175 NKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSL 234
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ + + ++ RG N IT+ +L+ GLC N QV +A+ ++ QGI
Sbjct: 235 IDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGI 294
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N +Y IL++GLCK G+ R A
Sbjct: 295 RPNIYTYTILVDGLCKNGRLRDA 317
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLV--------KTKHYSI------AISLSH 75
L +D L++ ++ + P ++ +N ++ L+ K +SI A+ L +
Sbjct: 53 KLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLN 112
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
QM + + P+I T L++ C G++ A +VLA ++K+ +PN +T+ +L+ G L
Sbjct: 113 QMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVK 172
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+V +A Q + + +G+ N SY ++INGLCK A L +
Sbjct: 173 EVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFK 217
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC------------- 95
P ++ +N I+ L K K S L +M + I PD+VT N LI
Sbjct: 37 PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEY 96
Query: 96 -YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ LGQM A +L ++ + PN TFTTL+ GLC + +VK+A ++ Q ++
Sbjct: 97 GFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEP 156
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y L++G V + A +L
Sbjct: 157 NIVTYNSLMDGYFLVKEVNKAKQLF 181
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ R P+I+ +N ++ K + A L + + RG+ P++ + ++IN C
Sbjct: 149 MIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKM 208
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A ++ ++ + P+T+ + +LI GLC + ++ F E+ +G N ++Y
Sbjct: 209 VDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNS 268
Query: 162 LINGLCKVGQTRAALRLL 179
L++GLCK Q A+ LL
Sbjct: 269 LLDGLCKNHQVDKAITLL 286
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV L N++ TP+I F ++ L K A ++ M + + P+IVT N L+
Sbjct: 106 EAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLM 165
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + +++ A + I RG PN ++ +I GLC N V A E+ ++ +
Sbjct: 166 DGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMV 225
Query: 154 LNQVSYGILINGLCK 168
+ V+Y LI+GLCK
Sbjct: 226 PDTVAYNSLIDGLCK 240
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 46 RHTPS-IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSV 104
R P+ II +N +L L K AI+L +++ +GI P+I T IL++ C G++
Sbjct: 257 RGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRD 316
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A V +L +GY+ + +T +I GLC + AL ++ + V+Y I I
Sbjct: 317 AQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIR 376
Query: 165 GL 166
L
Sbjct: 377 AL 378
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ + +P + FN ++ A L QM + I P + T
Sbjct: 32 LVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFT 91
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ C G+M A SV+A ++K G PN +T+T++++G CL ++V + +
Sbjct: 92 ILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRM 151
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N SY I+ING CK+ AL L +
Sbjct: 152 GVAPNTQSYNIMINGFCKIKIVNEALILFK 181
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N I+ L K K + A L +M I PD+ T N LI +C +GQ+ AF +
Sbjct: 16 DVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLF 75
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++++ + P+ TFT L+ GLC ++K A ++ G+ N V+Y ++ G C V
Sbjct: 76 SQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLV 135
Query: 170 GQTRAALRLLR 180
+ + R
Sbjct: 136 NEVNKTKHVFR 146
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 58/103 (56%)
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
++ Q+E + + D+V N +I+ C ++ A+ + ++++ P+ TF +LI G C
Sbjct: 4 VNDQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFC 63
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ Q+K A +++ + I + ++ IL++GLCK G+ + A
Sbjct: 64 IIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEA 106
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 58/182 (31%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
SI+E ++ + KTKH IS G+ P+ + NI+IN +C + ++ A +
Sbjct: 127 SIMEGYCLVNEVNKTKHVFRTISR------MGVAPNTQSYNIMINGFCKIKIVNEALILF 180
Query: 110 AKILKRGYKPNTITFTTLIKGLC------------------------------------- 132
++ RG P T+T+++LI GLC
Sbjct: 181 KEMCCRGIVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHL 240
Query: 133 ---------LNDQ------VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+ DQ +K A +LL +G LN +Y I+INGLCK G A
Sbjct: 241 DKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEA 300
Query: 178 LL 179
LL
Sbjct: 301 LL 302
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 22 SSLHSHS--------RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL 73
S++HS++ + ++AV LF + P I+ +N ++ L+K S A L
Sbjct: 202 SNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRISDAWDL 261
Query: 74 SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
++M RG D++T N L++ C Q+ +A ++ KI +G +P T+T L+ GLC
Sbjct: 262 VNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCK 321
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
N ++K A + + LL +G L+ Y ++INGLCK AL LL
Sbjct: 322 NGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKESLFDKALSLL 367
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 11 RNPTFLLAMPFSSLHSH------SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT 64
RN LL P ++S L DA L++ ++ MR P+++ +N ++
Sbjct: 53 RNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIV 112
Query: 65 KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
AI L ++M + I P++VT N L++ C G+M A VLA ++K+G + N +T+
Sbjct: 113 GQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTY 172
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ L+ G L +V +A + ++ +G+ N SY ++INGLCK A+ L +
Sbjct: 173 SFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFK 228
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FN +++ T ++ + ++ L K K A++L +M + + PDIVT N L
Sbjct: 186 NKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSL 245
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A+ ++ ++ RG + IT+ +L+ LC N QV A+ ++ QGI
Sbjct: 246 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGI 305
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q +Y IL++GLCK G+ + A
Sbjct: 306 QPYIYTYTILVDGLCKNGRLKDA 328
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 46/53 (86%)
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+KGLCLN +VK AL FHD+++A+ QLNQVSYG LI+GLCK G+TRAA+++LR
Sbjct: 1 MKGLCLNGKVKEALYFHDDVIAKEFQLNQVSYGTLIDGLCKAGETRAAMQVLR 53
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L N + +I +N +L L K +AI+L +++ +GI P I T IL
Sbjct: 256 SDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTIL 315
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A V +L +GY + +T +I GLC +AL ++ G
Sbjct: 316 VDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGC 375
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V++ ILI L + A+ LLR
Sbjct: 376 TPNPVTFEILIRALFENDMNDKAVELLR 403
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 69/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L K A+ + ++ + P++V + +I C + AF + ++
Sbjct: 30 VSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSE 89
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ PN +T+ TLI G C+ Q+K+A+ +E+L + I N V++ L++GLCK G+
Sbjct: 90 MVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGE 149
Query: 172 TRAALRLL 179
+ A ++L
Sbjct: 150 MKKARKVL 157
>Medtr1g064170.1 | PPR domain protein | LC | chr1:28237724-28239601
| 20130731
Length = 400
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV FN +L P I +N +L LVK Y SL ++++ DI T ILI
Sbjct: 75 AVLCFNIMLSNGMAP-ISNYNFVLESLVKVGSYPTVFSLFNKLDES--TQDIHTWAILIK 131
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE-LLAQGIQ 153
C+ G MS A S+ KI+ G+ P T +L+ G C Q+ +A+ F++ +L +G Q
Sbjct: 132 CHSVDGNMSSAISLFHKIIDTGHHPTAGTLYSLLYGFCDRHQIHKAMHFYNYIILKKGFQ 191
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
L+ Y +LI GLCK+G+T A++LLR
Sbjct: 192 LDHKCYLVLIKGLCKIGETHTAIQLLR 218
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 88.2 bits (217), Expect = 4e-18, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 24 LHSHSRSLPNDAV-CLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
LHS +S D+V ++N LL P++I + +L +S A + +M RGI
Sbjct: 95 LHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGI 154
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+P++V LI +C+ G M A L + + G +PN T+ TLI G C VKR +
Sbjct: 155 VPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFE 214
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ ++L G+ + V++ IL++ LCKVG AA
Sbjct: 215 IYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAA 247
Score = 87.4 bits (215), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 72/130 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ E N +L LVK+K + S+ + + RG++P ++T IL+NC C+ G S A V
Sbjct: 86 PSLRECNALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKV 145
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++RG PN + +TTLI+ C + A +F + G++ N +Y LI+G CK
Sbjct: 146 FDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCK 205
Query: 169 VGQTRAALRL 178
G + +
Sbjct: 206 TGNVKRVFEI 215
Score = 82.0 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 68/118 (57%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L + + A +L +ME G+ + VT N +I+ YC +G M A V +++ +R +PN
Sbjct: 308 LCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPN 367
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
ITF+TLI G C +K A+ + E++ +G+ + V+Y LI+G CKV ++ A L
Sbjct: 368 VITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFEL 425
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 69/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ K AI + QM R I P+++T + LI+ +C G M A + +
Sbjct: 334 VTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIE 393
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ +G P+ +T+T LI G C + K A + H E++ G+ N V+ LI+GL K G+
Sbjct: 394 MVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGK 453
Query: 172 TRAALRLL 179
T A++L
Sbjct: 454 TYGAIKLF 461
Score = 70.9 bits (172), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ + + P++I F+ ++ K + A+ L +M +G++PD+VT LI+
Sbjct: 352 AIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALID 411
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG--- 151
+C + VAF + ++++ G PN +T T+LI GL + A++ E G
Sbjct: 412 GHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPG 471
Query: 152 --------IQLNQVSYGILINGLCKVGQTRAALRLLR 180
N+V Y LI GLCK G+ A + +
Sbjct: 472 GKTDHSGVCSPNEVMYAALIQGLCKDGRIFKATKFFK 508
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 69/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ K A+ L +ME G+ D+ T +IL+ C G+ A ++
Sbjct: 261 PNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNL 320
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ K G N +T+ +I G C +++A++ ++ + I+ N +++ LI+G CK
Sbjct: 321 MEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCK 380
Query: 169 VGQTRAALRL 178
G +AA+ L
Sbjct: 381 KGNMKAAMGL 390
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 70/141 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++ +L+ P ++ F ++ L K A + M+ G+ P++ N LI+ YC
Sbjct: 215 IYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYC 274
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A + ++ + G + T + L+KGLC + + + A +E+ G+ N V
Sbjct: 275 KAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAV 334
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y +I+G CK+G A+ +
Sbjct: 335 TYNAVIDGYCKMGDMEKAIEV 355
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ + ++ KT + + M G+ PD+VT IL++ C +G + A +
Sbjct: 191 PNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNC 250
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ K G PN + LI G C + A++ DE+ G+ + + IL+ GLC
Sbjct: 251 FVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCD 310
Query: 169 VGQTRAALRLL 179
G+ A L+
Sbjct: 311 SGRFEEAKNLM 321
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ ++NR+ + P +I +N ++ L K+ S A L M +G PD VT L
Sbjct: 286 SEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSL 345
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G+ A ++L ++ +G PNT T+ TL+ GLC + +A++ + + + G+
Sbjct: 346 MNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGL 405
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+L+ SY + LC VG+ A +
Sbjct: 406 KLDMASYATFVRALCSVGRVADAYEVF 432
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
+DAV L L +P I +N ++ L K++ S+ + +M + + P++VT I
Sbjct: 180 DDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTI 239
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ C+ + A ++ + + G+KP+ + T++KG C+ + A++ ++ + +G
Sbjct: 240 LIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKG 299
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + ++Y LI GL K G+ A +LLR
Sbjct: 300 VEPDLITYNTLIFGLSKSGRVSEAKKLLR 328
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + ++ + TK+ A L +E G PD N ++ YC L + S A V
Sbjct: 232 PNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEV 291
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ ++G +P+ IT+ TLI GL + +V A + + +G ++V+Y L+NG+C+
Sbjct: 292 YNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCR 351
Query: 169 VGQTRAALRLLR 180
G+T AAL LL
Sbjct: 352 KGETLAALALLE 363
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + L + P +N I+ S AI + ++M+ +G+ PD++T N LI
Sbjct: 252 EATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLI 311
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G++S A +L + ++G+ P+ +T+T+L+ G+C + AL +E+ +G
Sbjct: 312 FGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCS 371
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
N +Y L++GLCK A+ L
Sbjct: 372 PNTCTYNTLLHGLCKSRMFDKAMEL 396
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 33 NDAVCLFNRLLQM--RHTPSIIEFNKILTPLVKT--KHYSIAISLSHQ----MEFRGIMP 84
ND++ + + +P ++ +LT K+ YS +SL HQ M GI P
Sbjct: 103 NDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYS-TLSLIHQTLNLMVSDGISP 161
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D T+++ + C ++ A ++ ++ + P+ ++ L+K LC + + F
Sbjct: 162 DKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFI 221
Query: 145 DELLAQ-GIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE+ + ++ N V+Y ILI+ +C R A RL+
Sbjct: 222 DEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLV 257
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 78/146 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L++ ++ + P ++ F+ ++ + A L H+M + I D+ T NIL+
Sbjct: 152 DAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILV 211
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G + VA ++LA ++K G P+ +T+ +L+ G CL ++V +A + + G+
Sbjct: 212 DALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVA 271
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y I+ING CK+ AL L
Sbjct: 272 PDAHTYSIMINGFCKIKMVDEALSLF 297
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 49/166 (29%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D CL N + + +H +II QM G+ PD T +I+I
Sbjct: 247 DGYCLVNEVNKAKHVFNIIS----------------------QM---GVAPDAHTYSIMI 281
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL------ 147
N +C + + A S+ ++ +RG PNT+T+ +LI GLC + ++ A + D +
Sbjct: 282 NGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQP 341
Query: 148 ------------------LAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ QGIQ + +Y ILI+GLCK G+ + A
Sbjct: 342 ADIFTYNSLIDALCKNHHIDQGIQPDMYTYNILIDGLCKGGRLKNA 387
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ N I+ L K K A L +M + I PD+VT + LI +C +GQ AF +
Sbjct: 133 NVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLF 192
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ + + TF L+ LC VK A ++ +G+ + V+YG L++G C V
Sbjct: 193 HEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLV 252
Query: 170 GQTRAA 175
+ A
Sbjct: 253 NEVNKA 258
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ + ++E + I ++V N +I+ C + A+ + ++++ + P+ +TF++LI
Sbjct: 118 ALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIY 177
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G C+ Q K A + E++ + I + ++ IL++ LCK G + A LL
Sbjct: 178 GFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLL 227
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 85 DIVTLNILINCY-CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
++V+ + +C C +G+ A +L KI + N + T+I LC + V A
Sbjct: 97 NVVSDTCVCDCVDCKMGETRAALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGL 156
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ E++A+ I + V++ LI G C VGQ + A RL
Sbjct: 157 YSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLF 192
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LFN +L+ TP+++ ++ ++ L K + + A + M + PD+V +L +
Sbjct: 256 LFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLS 315
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ S A VL ++KRG +PN +T+ +I GLC +V AL + + +G + + V
Sbjct: 316 KNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVV 375
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y L+ GLC VG+ A+ LL
Sbjct: 376 TYSTLVKGLCGVGKIDEAVDLL 397
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L K K A L +M+ P+ VT + LI+ +C G + F +
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGL 221
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ K G + + ++ LI G C ++R + +E+L + + N V+Y L+N LCK
Sbjct: 222 LEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK 281
Query: 169 VGQTRAALRLL 179
+ + A ++L
Sbjct: 282 KQKWKEAAQML 292
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + + + + P ++ + + L K S AI + M RG P+ VT N +I
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-- 151
N C G++ A +L + K+G KP+ +T++TL+KGLC ++ A+ + L+++
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH 406
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
I+ + ++ ++I LCK + R A R+
Sbjct: 407 IKPDVFAFNLVIQELCKQRRLRHAKRV 433
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ + + +++ P+ + +N I+ L K A+ + M +G PD+VT + L
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL 380
Query: 93 INCYCHLGQMSVAFSVLAKILKRGY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ C +G++ A +L ++ + + KP+ F +I+ LC +++ A + + ++ +
Sbjct: 381 VKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER 440
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G N V+Y ILI+G G+ AL L +
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWK 470
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF + P+ + F+ ++ K L +ME G+ D+ + LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C G + + ++L++ PN +T++ L+ LC + K A Q D + ++
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +L +GL K G+ A+++L
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVL 327
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS N ++ L K KHY IS+ +M + P +L+ LI + + + S AF V
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L I+KRG+ N F L+KG C + +A+ + + + VSY +INGLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 169 VGQTRAALRLLR 180
+ A L +
Sbjct: 177 GKRLVEAKELFK 188
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
++AV L N L+ P + FN ++ L K + A + + M RG +IVT N
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI+ Y G+++ A + + G PN T+T LI GLC + A ++ A
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + Y L+ LC+ A L +
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQ 540
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + H P ++ FN I+ +K A L +M ++PD +T +ILIN +
Sbjct: 538 LFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFL 597
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
LGQ+ A S+ +++ G+ P+ + F +L+KG L + ++ + ++ + + L+
Sbjct: 598 KLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSK 657
Query: 158 SYGILINGLCKVGQ 171
++ LC + +
Sbjct: 658 LTSTILACLCNMSK 671
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 46 RHTPS-IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSV 104
R PS I+ +N ++ + + A+ L GI P+ T +LIN C + +S+
Sbjct: 440 RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSI 499
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A + K G +P + TL+ LC V++A E+ + VS+ I+I+
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIID 559
Query: 165 GLCKVGQTRAA 175
G K G +A
Sbjct: 560 GTLKAGDVESA 570
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LFN+ P++ E+N ++ L + A +L +M PD+V+ NI+I+
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L ++L P+ ITF+ LI Q+ A ++ +++ G + V
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L+ G G+T + +L+
Sbjct: 623 LFDSLLKGYSLKGKTEKVVSMLQ 645
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + N +++ ++ +N +L L + K A L +M RG+ PD TL LI+
Sbjct: 432 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 491
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G M+ A S+ + R KP+ +T+ TL+ G C ++++A + +++++ I
Sbjct: 492 GYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP 551
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ +S+ ILING C +G A RL
Sbjct: 552 SYISFSILINGFCSLGLVSEAFRL 575
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
L + + S ND N ++ P I +N ++ VK +++ A L + ME RG++
Sbjct: 599 LRAGNLSKAND---FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLL 655
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++VT N ++ + G+M A VL K++ +G P+ T+T+LI G D +K A +
Sbjct: 656 PNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRV 715
Query: 144 HDELLAQG 151
HDE+L +G
Sbjct: 716 HDEMLQRG 723
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 73/131 (55%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ + +L + P+ FN +L + + A + ++M RG++PD+++ + ++ +
Sbjct: 330 VLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFS 389
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A + K+ G P+T+ +T LI G C ND V AL+ +E++ +G ++ V
Sbjct: 390 RNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVV 449
Query: 158 SYGILINGLCK 168
+Y L+NGLC+
Sbjct: 450 TYNTLLNGLCR 460
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +LQ P +I F+ I+ + A++ +M+ G++PD V ILI
Sbjct: 361 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 420
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC +S A + ++++RG + +T+ TL+ GLC + A + E++ +G+
Sbjct: 421 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 480
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ + LI+G CK G AL L
Sbjct: 481 PDFYTLTTLIHGYCKDGNMTKALSLFE 507
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F ++ + P + + ++ + S A+ + ++M RG + D+VT N L+N
Sbjct: 397 ALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLN 456
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C + A + ++++RG P+ T TTLI G C + + +AL + + + ++
Sbjct: 457 GLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKP 516
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ V+Y L++G CKVG+ A L
Sbjct: 517 DVVTYNTLMDGFCKVGEMEKAKEL 540
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + P ++ +N ++ K A L + M R I P ++ +ILIN
Sbjct: 502 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 561
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C LG +S AF + ++ ++G KP +T T+IKG + +A F + ++++G+
Sbjct: 562 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 621
Query: 155 NQVSYGILINGLCK 168
+ ++Y LIN K
Sbjct: 622 DCITYNTLINSFVK 635
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA LF +++ P ++ K + + A+SL M R + PD+VT N L
Sbjct: 465 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 524
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C +G+M A + ++ R P+ I+F+ LI G C V A + DE+ +GI
Sbjct: 525 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 584
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ V+ +I G + G A
Sbjct: 585 KPTLVTCNTIIKGYLRAGNLSKA 607
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
++ + LS +ME +G+ D+VT N L+N YC G +S AF ++ + +G KP T+ L
Sbjct: 256 NVGVYLS-EMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNAL 314
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
I GLC +RA + DE+L G+ N ++ ++ C+ A R+
Sbjct: 315 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVF 366
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R L ++A L + + P + +N ++ L K Y A + +M G+ P+ T
Sbjct: 286 RGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAAT 345
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N ++ C + A V ++L+RG P+ I+F++++ N ++ RAL + +++
Sbjct: 346 FNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 405
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G+ + V Y ILING C+ AL++
Sbjct: 406 GVGLVPDTVIYTILINGYCRNDDVSGALKM 435
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
SI N +L +VK +A + G + ++ TLNI++N C G++ L
Sbjct: 202 SINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYL 261
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ ++G + +T+ TL+ C V A D + +G++ +Y LINGLCK
Sbjct: 262 SEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKE 321
Query: 170 GQTRAALRLL 179
G A R+L
Sbjct: 322 GSYERAKRVL 331
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS I F+ ++ S A L +M+ +GI P +VT N +I Y G +S A
Sbjct: 551 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 610
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G P+ IT+ TLI + RA + + +G+ N V+Y ++ G +
Sbjct: 611 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 670
Query: 169 VGQTRAALRLL 179
G+ + A +L
Sbjct: 671 HGRMQEAEMVL 681
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S L ++A L++ + + P+++ N I+ ++ + S A + M G+ PD +
Sbjct: 565 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 624
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N LIN + AF ++ + +RG PN +T+ ++ G + +++ A ++
Sbjct: 625 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 684
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ +GI ++ +Y LING + A R+
Sbjct: 685 IDKGINPDKSTYTSLINGYVSKDNMKEAFRV 715
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N ++ + S A L M +G+ P + T N LIN C G A VL
Sbjct: 272 DLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVL 331
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++L G PN TF ++ C + V A + +E+L +G+ + +S+ ++ +
Sbjct: 332 DEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRN 391
Query: 170 GQTRAAL 176
G+ AL
Sbjct: 392 GELGRAL 398
>Medtr6g092390.1 | PPR repeat protein | LC | chr6:34782856-34785807
| 20130731
Length = 127
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 65/137 (47%), Gaps = 40/137 (29%)
Query: 32 PNDA---VCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
PND V FNRLL ++ TP I +F KIL LVK K Y AISL QME
Sbjct: 5 PNDGHNLVSSFNRLLHQKNPTPFIFQFGKILGSLVKIKCYHTAISLHRQMEL-------- 56
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
GY PN IT TTLIKGLCL ++ +AL FHD+L
Sbjct: 57 ----------------------------GYDPNVITLTTLIKGLCLKGRIDQALHFHDKL 88
Query: 148 LAQGIQLNQVSYGILIN 164
+A G N VSYG +
Sbjct: 89 VALGFCFNHVSYGTFLG 105
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N ++ + AI L ++M +G+ PD++T N L+N C + +
Sbjct: 459 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 518
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++G PN IT+ T+I+ LC + +V A+ E+ ++G+ + VS+G LI G CK
Sbjct: 519 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 578
Query: 169 VGQTRAALRLLR 180
VG A L R
Sbjct: 579 VGDLDGAYGLFR 590
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 81/149 (54%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ A+ +F L PSII +N ++ L + A+ L ++M +G PDI T N+
Sbjct: 372 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 431
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN C +G +S A ++ + +G P+ T+ TL+ G C ++ A++ + + +QG
Sbjct: 432 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 491
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y L+NGLCK ++ + + +
Sbjct: 492 MTPDVITYNTLLNGLCKTAKSEEVMEIFK 520
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+++ P+ +N I+ K A + F+G PD T L+N +C G
Sbjct: 311 KMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG 370
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
A +V L +G +P+ I + TLIKGLC + ALQ +E+ +G + + +Y
Sbjct: 371 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 430
Query: 161 ILINGLCKVG 170
++INGLCK+G
Sbjct: 431 LIINGLCKMG 440
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ L + A H+M G P+ T N +I+ YC G + A +
Sbjct: 284 PDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRI 343
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + +G+KP+ T+ +L+ G C + +A+ + L +G++ + + Y LI GLC+
Sbjct: 344 LKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ 403
Query: 169 VGQTRAALRLL 179
G AL+L+
Sbjct: 404 QGLILPALQLM 414
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N + + P I +N I+ L K S A L +G +PDI T N L++
Sbjct: 410 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 469
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC ++ A ++ ++ +G P+ IT+ TL+ GLC + + ++ + +G
Sbjct: 470 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 529
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N ++Y +I LC + A+ LL
Sbjct: 530 NIITYNTIIESLCNSKKVNEAVDLL 554
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+++L+ P++ FN + L K A+ L + G+ PD+VT N +I C
Sbjct: 238 LFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLC 297
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A L K++ G++PN T+ ++I G C V A + + + +G + ++
Sbjct: 298 RKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEF 357
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y L+NG C+ G A+ + +
Sbjct: 358 TYCSLVNGFCQDGDPDQAMAVFK 380
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 24 LHSHSRSLPND-AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+ + R L D A+ L NR+ TP +I +N +L L KT + + M +G
Sbjct: 468 VDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGC 527
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC---------- 132
P+I+T N +I C+ +++ A +L ++ +G P+ ++F TLI G C
Sbjct: 528 APNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYG 587
Query: 133 ------------------------LNDQ--VKRALQFHDELLAQGIQLNQVSYGILINGL 166
++Q +K AL+ E+ G + +Y +LI+G
Sbjct: 588 LFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGF 647
Query: 167 CKVGQTRAALRLL 179
CK G + L
Sbjct: 648 CKTGNVNQGYKFL 660
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 36/178 (20%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + + P+II +N I+ L +K + A+ L +M+ +G+ PD+V+ LI +C
Sbjct: 518 IFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFC 577
Query: 98 HLGQ------------------------------------MSVAFSVLAKILKRGYKPNT 121
+G M +A + +++ K G P+
Sbjct: 578 KVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDN 637
Query: 122 ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
T+ LI G C V + +F E + +G + ++G ++N LC + + A+ ++
Sbjct: 638 YTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 695
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD+ T N L++ C G + + + K+LKRG PN TF I+GLC + RA++
Sbjct: 214 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 273
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G++ + V+Y +I GLC+ + A L
Sbjct: 274 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECL 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 35/181 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV F R+ PS+ +N I+ LV+ +++ A + +M+ + + D+ T I I
Sbjct: 94 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 153
Query: 94 NCYCHLGQMSVAFSVL-----------------------------------AKILKRGYK 118
+C G+ A +L ++L+
Sbjct: 154 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 213
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P+ TF L+ LC V + + D++L +G+ N ++ I I GLCK G A+RL
Sbjct: 214 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 273
Query: 179 L 179
L
Sbjct: 274 L 274
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 13/152 (8%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKIL------TPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+A LF + + + TP++ F +L LV+ KH + QM+ GI PDIV
Sbjct: 237 EAASLFEDM-RYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLV------QMKDAGIEPDIV 289
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
N L+ Y G+M A+ +L ++ ++G +PN ++T LI+ LC +++++ A++ E+
Sbjct: 290 VFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEM 349
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G Q++ ++Y LI+G CK G+ + LL
Sbjct: 350 QRSGCQMDVITYTTLISGFCKWGKIKRGYELL 381
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 42 LLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
L+QM+ P I+ FN +L + A L +M +G P+ + +LI C
Sbjct: 276 LVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCK 335
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
++ A + ++ + G + + IT+TTLI G C ++KR + D++ +G NQ++
Sbjct: 336 HEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLT 395
Query: 159 Y 159
Y
Sbjct: 396 Y 396
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 39 FNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
++ L +MR P+ + ++ L K + A+ + +M+ G D++T LI+
Sbjct: 308 YDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISG 367
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C G++ + +L ++ + G+ PN +T+ ++ ++++ ++ +E+ G +
Sbjct: 368 FCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPD 427
Query: 156 QVSYGILINGLCKVGQTRAALRL 178
Y I+I CK+G+ + +RL
Sbjct: 428 LNIYNIVIRLACKLGEVKQGVRL 450
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 56/115 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L +++ Q H+P+ + + I+ K + + L ++M+ G +PD+ NI+I C
Sbjct: 380 LLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLAC 439
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
LG++ + ++ G P TF +I G + + A +F E++ +G+
Sbjct: 440 KLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGL 494
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 33 NDAVCLFN---RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+DAV FN RL+ + PS+ N ++ VK+ + A +QM I PD+ T
Sbjct: 159 DDAVYAFNVMRRLIDGK--PSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTF 216
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
NILI+ YC + A + ++ K G PN +TF TLIKGL +V + E++
Sbjct: 217 NILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIE 276
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G QL+ V+ IL++GLCK G+ LL
Sbjct: 277 LGCQLSDVTCEILVDGLCKEGRVSQVCDLL 306
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F+ + +M P+++ FN ++ L + I + ++M G VT IL++
Sbjct: 232 ALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVD 291
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++S +L + KRG P + L++ LC + +AL+ EL ++G
Sbjct: 292 GLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVP 351
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +S ++I+GL +G+ A+RL+
Sbjct: 352 SLISCIVMIDGLRGLGKIEEAMRLVE 377
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 69/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A +N++++ R P + FN +++ + + A+ + +M G P++VT N L
Sbjct: 195 DRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTL 254
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I ++ ++ ++++ G + + +T L+ GLC +V + E +G+
Sbjct: 255 IKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGV 314
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Y +L+ LC G+ AL ++
Sbjct: 315 LPKGYDYFVLVEILCGKGEAFKALEVI 341
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 73/131 (55%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+++ +N ++ K A + +M+ RG P++VT N LIN +C G + A +L
Sbjct: 415 NVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELL 474
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L+ KP+ TF+ +I GLC + + A + +E++ G+ N + Y ILI LC +
Sbjct: 475 EMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSI 534
Query: 170 GQTRAALRLLR 180
G+T +++LLR
Sbjct: 535 GETTRSVKLLR 545
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I + + L K + +S QM G++ ++V+ N+LI+C+C + M A V
Sbjct: 379 PGIGTYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEV 438
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ RG+ PN +TF TLI G C + + +A + + LL ++ + ++ +I+GLC+
Sbjct: 439 FSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCR 498
Query: 169 VGQTRAALR 177
+ +T A
Sbjct: 499 LKRTEEAFE 507
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 9 FHRNPTFLLAMPFSSLHSHSRSLPNDAVCL----FNRLLQMRH-------------TPSI 51
+ P L A + +H + D +C+ + RL R+ +P+
Sbjct: 110 YRNGPVVLSAEFLNDVHKSGFKVSEDLLCVLMSSWGRLGLARYCVDVFGQISFLGISPTT 169
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+N ++ LVK+ +A S QM PD +T N+LI+ C +G + A ++ +
Sbjct: 170 RLYNSLIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDEALRLIRQ 229
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ +G PN T+T LI G C +V A D + + N+ + L++G+ +
Sbjct: 230 MKDKGLFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEATIRTLVHGVFRCVD 289
Query: 172 TRAALRLL 179
A LL
Sbjct: 290 PSKAFVLL 297
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL + A +F+ + TP+++ FN ++ K A L + + PDI T
Sbjct: 430 SLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTF 489
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+ +I+ C L + AF ++++ G PN I + LI+ LC + R+++ +
Sbjct: 490 SCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQE 549
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+GI + SY LI C++ + A +L
Sbjct: 550 EGISPDIYSYNALIQIFCRMNKVEKAKKLF 579
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
RG +PD N+++ C ++ A + KRG KP T+ TL + L ++Q
Sbjct: 340 RGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDE 399
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKV 169
Q D++++ G+ N VSY +LI+ CKV
Sbjct: 400 GDQISDQMVSDGLISNVVSYNMLIDCFCKV 429
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A FN +++ P+ I +N ++ L + ++ L +M+ GI PDI + N LI
Sbjct: 504 EAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALI 563
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+C + ++ A + + K G+ P+ T++ I L + +++ A + + A G
Sbjct: 564 QIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSMEANG 621
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+ S+ + V + L + P FN I+ LVK A + RG+ P I
Sbjct: 323 NNSMAKEMVVFIRKALARGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIG 382
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T L Q + +++ G N +++ LI C + +A + E+
Sbjct: 383 TYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEM 442
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G N V++ LING CK G A LL
Sbjct: 443 QLRGFTPNLVTFNTLINGHCKDGAIIKARELLE 475
>Medtr3g086470.1 | proton gradient regulation protein, putative | LC
| chr3:39190426-39190070 | 20130731
Length = 118
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 62 VKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNT 121
+K+ +++AISL ++ G+ PD++T+NI+IN + + +A +L K + G +P+
Sbjct: 1 MKSHQHNVAISLFKKLNVAGVRPDVITMNIIINSLVQVANLKMAKCILGKSVILGLEPDV 60
Query: 122 ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF TL +G V A++ H +L+ G LNQV+YG LI GLC+ T AA+ LL
Sbjct: 61 WTFATLFRGY----SVVGAMELHHKLVDSGFVLNQVTYGTLIEGLCRREGTNAAINLL 114
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N LI
Sbjct: 495 EALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 555 KALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLT 614
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 615 PDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr1g054655.1 | PPR superfamily protein | LC |
chr1:23786289-23787419 | 20130731
Length = 376
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME-----FRGIM---P 84
++AV F +L M I +N +L+ L K + L +++ F G + P
Sbjct: 69 DEAVKFFKNMLSM-GVCVISLYNHVLSKLAKMHSFDTIFILVKELDDELSKFDGPVRPDP 127
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D T ILI C+ G MS A + KI+ G+ P T L++G CL Q+ +A+ F+
Sbjct: 128 DTHTFIILIQCHSLRGNMSSALYLFNKIIDSGHYPTAETLNALLEGFCLRSQIDKAMPFY 187
Query: 145 DE-LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +L +G L+ SY IL++GLC++G+T+ A+ +LR
Sbjct: 188 NDIILKKGYPLDHRSYNILVDGLCEIGETQLAINMLR 224
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 14 TFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL 73
TF++ + SL + S A+ LFN+++ H P+ N +L A+
Sbjct: 131 TFIILIQCHSLRGNMSS----ALYLFNKIIDSGHYPTAETLNALLEGFCLRSQIDKAMPF 186
Query: 74 SHQMEFRGIMP-DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN------TITFTT 126
+ + + P D + NIL++ C +G+ +A ++L + L +P T + +
Sbjct: 187 YNDIILKKGYPLDHRSYNILVDGLCEIGETQLAINMLRQALLIEREPEDTCVSLTSCYNS 246
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+I L V +A + E++ I LN ++Y LI G C +G + A+ LL+
Sbjct: 247 IIFRLSKERLVNQAYALYVEMIFNNILLNPITYANLIYGYCIIGHFKLAVELLK 300
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
P+ + +N ++ V + + A L ++ M G PD T NI+I+ C G + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
L +++K+G++PN IT+T LI G C + A + + + A+G+ LN V Y LI L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 167 CKVGQTRAALRL 178
CK G+ + AL++
Sbjct: 453 CKDGKIQDALQM 464
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L QM I P I + NILIN +C G+++ A L
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++RG P+ +T+ +LI GLC + + AL + L A+GI + V+Y LI+ C G
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 172 TRAALRLL 179
A +LL
Sbjct: 668 FNDACQLL 675
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ +M +G P+++T ILI+ +C
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFC 418
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A V+ + +G NT+ + LI LC + +++ ALQ + E+ ++G + +
Sbjct: 419 KQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK + AL L R
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYR 501
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++I + ++ K H+ A + + M +G+ + V N LI
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A + ++ +G KP+ TF +LI GLC ND+++ AL + ++L +G+
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+ ++ + A +L+
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLV 535
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T +++ +C + ++ A S+
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + K G PN+I + LI L N++V A++ +E+ G + + ++ +I+GLCK
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282
Query: 169 VGQTRAALRL 178
G+ A +L
Sbjct: 283 AGRIHEAAKL 292
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ L + M P + FN ++ L K A L +M R D + L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311
Query: 93 INCYCHLGQMSVAFSVLAKI--------------------------------LKRGYKPN 120
++ C +G++ A ++L+KI + G++P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
TF +I GLC + AL+F DE++ +G + N ++Y ILI+G CK G A +++
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ ++ + P I FN ++ L K A+ L M G++ + VT N LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + L + A ++ ++ RG + IT+ LIK LC ++ L +++ + I
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ S ILIN C+ G+ AL+ LR
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLR 606
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++Q TP I+ +N ++ L K + A++L + ++ +GI PD VT N L
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ YC+ G + A +L K + G+ PN IT++ LI
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L+ +L + + +N ++ ++ + A L +M FRG D +T N L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++ ++ P+ + LI C +V ALQF +++ +G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LINGLCK+G+ + AL L
Sbjct: 614 TPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N ++ +T + A+ M RG+ PDIVT N LIN C +G+ A ++
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G P+ +T+ TLI C A Q + ++ G N++++ ILIN K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Query: 169 VGQ 171
Q
Sbjct: 700 KHQ 702
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L +P++ F ++ A SL M G +P+ + +
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ +++ A +L ++ G +P+ TF +I GLC ++ A + HD +L +
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + G L++GLC++G+ A +L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAML 328
>Medtr1g064380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28325537-28326727 | 20130731
Length = 396
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQME------FRGIMPDIVTLNILINCYCHLGQMS 103
SI E+N +L+ L++ ++ +S + Q+E + ++PDI T ILI + G M
Sbjct: 89 SISEYNAVLSSLLRMGYHPTVLSFAQQLEESHNNHLQRVLPDIHTWTILIKAHAFDGNMF 148
Query: 104 VAFSVLAKILKRGYKPNTI-TFTTLIKGLCLNDQVKRALQFHDELL-----AQGIQLNQV 157
A S KI+ G++P T L+ G C+ Q+ +A+ F++ ++ G + N
Sbjct: 149 SAMSFFHKIINNGHRPTAEETLNILLHGFCVRHQIHKAMLFYNYIVLKNENGAGFKWNYH 208
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SY ILI GLC++G+T++A++LLR
Sbjct: 209 SYLILITGLCRIGETQSAIQLLR 231
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV L+N L +P+++ +N ++ K + + A++L +ME R I P VT IL
Sbjct: 356 DTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTIL 415
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N + + M AF + + + K G + T+ LI GLC+N +K A + L +
Sbjct: 416 LNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNM 475
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V Y LI+G CK G ALRLL
Sbjct: 476 EPNSVIYDTLIHGYCKEGNCYRALRLL 502
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 81/147 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LF R+ ++ P+I +N ++ + A+ L ++++ G+ P +VT N LI
Sbjct: 322 EAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLI 381
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
Y +G ++ A +++ ++ +R P +T+T L+ G + +++A + H + G+
Sbjct: 382 AGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLV 441
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ +YG+LI+GLC G + A +L +
Sbjct: 442 SDVYTYGVLIHGLCMNGSMKEASKLFK 468
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ ++ ++ A ++ +M + I I+T N+LIN C + ++ A +
Sbjct: 267 PNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKL 326
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + G +PN T+ TLIKG C +++ A++ ++EL + G+ V+Y LI G K
Sbjct: 327 FYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSK 386
Query: 169 VGQTRAALRLLR 180
VG AL L++
Sbjct: 387 VGNLAGALNLVK 398
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 39 FNRLLQMRHTP---SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
FN +MR SI+ +N ++ L + K A+ L +++ G+ P+I T N LI
Sbjct: 289 FNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKG 348
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
YC ++ A + ++ G P +T+ TLI G + AL E+ + I
Sbjct: 349 YCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPT 408
Query: 156 QVSYGILINGLCKVGQTRAALRL 178
+V+Y IL+NG ++ A +
Sbjct: 409 KVTYTILLNGFVRINYMEKAFEI 431
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 16 LLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSH 75
LL + + HS+S P++A+ + ++ H P FN +L L+++ + A +
Sbjct: 96 LLYEAIVNAYVHSQS-PDEALYFLHEMIHKGHAPISNTFNNLLNLLIRSNSFCRAWLVFD 154
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+++ + ++ D+ + I+I C G + +F +L + K G PN + +TTLI G C N
Sbjct: 155 ELKNKVVL-DVYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCKNG 213
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
V A + ++ + NQ +Y +LING K G + ++
Sbjct: 214 DVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQM 256
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
M+ GI+P++ T + +I YC+ G + AF+V ++ ++ + +T+ LI GLC
Sbjct: 258 ESMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRM 317
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ A++ + G++ N +Y LI G C + A+RL
Sbjct: 318 KKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRL 361
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+++ + ++ K +A L +M+ ++ + T ++LIN + G F
Sbjct: 196 SPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQ 255
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + G PN T++++I C + + +A DE+ + I + ++Y +LINGLC
Sbjct: 256 MYESMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLC 315
Query: 168 KVGQTRAALRLL 179
++ + A++L
Sbjct: 316 RMKKLGEAVKLF 327
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P++AV +FN L + H P+II + ++ L + K ++ SL ++E G+ PD + N
Sbjct: 59 PHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNA 118
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN + G++ A + K+ + G KP T TF TLIKG + + A++ + ++ G
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDG 178
Query: 152 -IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N+ +Y ILI C + A ++
Sbjct: 179 NVKPNERTYNILIQAWCTKNELEEAWNVM 207
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTP--LVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
++A+ +F ++ + P+ FN ++ +V H ++ + L ++ + P+ T N
Sbjct: 130 HEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL-LEMMIQDGNVKPNERTYN 188
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA--LQFHDELL 148
ILI +C ++ A++V+ K++ G +P+ +T+ TL + N + A L +
Sbjct: 189 ILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQY 248
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N+ + GI+I G CK G ALR L
Sbjct: 249 NNKVKPNERTCGIIIRGYCKEGNMTEALRFL 279
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILT---PLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+A+ ++ ++ P+ + FN ++ + T A++L ME GI PD+VT +
Sbjct: 274 EALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTL---MEEFGIKPDVVTYS 330
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
++N + G M + ++K +P+ ++ L KG Q +A + +
Sbjct: 331 TIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKY 390
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G+Q N V + +I+G C G+ ALRL
Sbjct: 391 GLQANVVIFTTIISGWCAAGKMDCALRL 418
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 65/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++I K+++ L++ A+++ + + G P I+T L+ L + + S+L
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+K+ + G KP++I F +I + +V A++ ++ G + ++ LI G V
Sbjct: 102 SKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV 161
Query: 170 GQTRAALRLL 179
G+ A++LL
Sbjct: 162 GRPHEAMKLL 171
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I PDI +IL Y GQ A ++L + K G + N + FTT+I G C ++ AL
Sbjct: 357 IEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCAL 416
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++++ G LN +Y LI G + Q A LL
Sbjct: 417 RLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELL 454
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 32 PNDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
P++A+ L ++Q + P+ +N ++ A ++ H+M G+ PDIVT N
Sbjct: 164 PHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 91 ILINCYCHLGQMSVAFSVLAKILK--RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
L + G+ A ++ K+ + KPN T +I+G C + AL+F ++
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 283
Query: 149 AQGIQLNQVSYGILINGLCKVGQT 172
G+ N V + LI G + T
Sbjct: 284 ELGVHPNPVVFNSLIKGYLDITDT 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIA--ISLSHQMEFRGIMPDIVTLNILINC 95
+ ++++ P I+ +N + + A + L Q + P+ T I+I
Sbjct: 206 VMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRG 265
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG---LCLNDQVKRALQFHDELLAQGI 152
YC G M+ A L K+ + G PN + F +LIKG + D V+ AL +E GI
Sbjct: 266 YCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF---GI 322
Query: 153 QLNQVSYGILINGLCKVG 170
+ + V+Y ++N G
Sbjct: 323 KPDVVTYSTIMNAWSSSG 340
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P++AV +FN L + H P+II + ++ L + K ++ SL ++E G+ PD + N
Sbjct: 59 PHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNA 118
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN + G++ A + K+ + G KP T TF TLIKG + + A++ + ++ G
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDG 178
Query: 152 -IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N+ +Y ILI C + A ++
Sbjct: 179 NVKPNERTYNILIQAWCTKNELEEAWNVM 207
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 5/151 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTP--LVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
++A+ +F ++ + P+ FN ++ +V H ++ + L ++ + P+ T N
Sbjct: 130 HEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKL-LEMMIQDGNVKPNERTYN 188
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA--LQFHDELL 148
ILI +C ++ A++V+ K++ G +P+ +T+ TL + N + A L +
Sbjct: 189 ILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQY 248
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N+ + GI+I G CK G ALR L
Sbjct: 249 NNKVKPNERTCGIIIRGYCKEGNMTEALRFL 279
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILT---PLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+A+ ++ ++ P+ + FN ++ + T A++L ME GI PD+VT +
Sbjct: 274 EALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTL---MEEFGIKPDVVTYS 330
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
++N + G M + ++K +P+ ++ L KG Q +A + +
Sbjct: 331 TIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKY 390
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G+Q N V + +I+G C G+ ALRL
Sbjct: 391 GLQANVVIFTTIISGWCAAGKMDCALRL 418
Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 65/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++I K+++ L++ A+++ + + G P I+T L+ L + + S+L
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+K+ + G KP++I F +I + +V A++ ++ G + ++ LI G V
Sbjct: 102 SKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV 161
Query: 170 GQTRAALRLL 179
G+ A++LL
Sbjct: 162 GRPHEAMKLL 171
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I PDI +IL Y GQ A ++L + K G + N + FTT+I G C ++ AL
Sbjct: 357 IEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCAL 416
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++++ G LN +Y LI G + Q A LL
Sbjct: 417 RLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELL 454
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 32 PNDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
P++A+ L ++Q + P+ +N ++ A ++ H+M G+ PDIVT N
Sbjct: 164 PHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 91 ILINCYCHLGQMSVAFSVLAKILK--RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
L + G+ A ++ K+ + KPN T +I+G C + AL+F ++
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 283
Query: 149 AQGIQLNQVSYGILINGLCKVGQT 172
G+ N V + LI G + T
Sbjct: 284 ELGVHPNPVVFNSLIKGYLDITDT 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIA--ISLSHQMEFRGIMPDIVTLNILINC 95
+ ++++ P I+ +N + + A + L Q + P+ T I+I
Sbjct: 206 VMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRG 265
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG---LCLNDQVKRALQFHDELLAQGI 152
YC G M+ A L K+ + G PN + F +LIKG + D V+ AL +E GI
Sbjct: 266 YCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF---GI 322
Query: 153 QLNQVSYGILINGLCKVG 170
+ + V+Y ++N G
Sbjct: 323 KPDVVTYSTIMNAWSSSG 340
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP + ++ K K A++L +M + I P++VT N LIN C G++S A
Sbjct: 92 TPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALE 151
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ ++ RG PN IT+ +++ LC N V +A+ F +L Q IQ + +Y ILI GLC
Sbjct: 152 LVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYGLC 211
Query: 168 KVGQTRAALRLLR 180
KVG+ + A ++
Sbjct: 212 KVGRLKDARKVFE 224
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ ++ I+ + K K + + L +M + I P+IVT N LI+ +C +GQ++ AF +
Sbjct: 18 PDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFGL 77
Query: 109 L-----AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
L + ++G P+T ++ +I G C V A+ +E+ + I N V+Y LI
Sbjct: 78 LQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLI 137
Query: 164 NGLCKVGQTRAALRLL 179
NGLC+ G+ AL L+
Sbjct: 138 NGLCRSGRISYALELV 153
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + P+++ +N ++ L ++ S A+ L +M RG P+I+T N +
Sbjct: 112 DEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSI 171
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C + A L K+ + +P+ T+ LI GLC ++K A + + LL +G
Sbjct: 172 LDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGC 231
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ +Y I+I+G C G A LL
Sbjct: 232 SLDAYTYTIMIHGFCSKGLFGEAFTLL 258
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ PD+V +++I+ C ++ + ++++ + PN +T+ TLI G C+ Q+ A
Sbjct: 16 VQPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAF 75
Query: 142 Q----FHDELLA-QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
F ++A +G+ + SY I+ING CK+ A+ L
Sbjct: 76 GLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFE 119
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A F ++ + P++ N L+ ++ K + +S QM I P++ T+N+++
Sbjct: 168 NATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVV 227
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GI 152
+ YC LG+++ A VL K+ G PN +TF +LI G C + AL+ D ++ + G+
Sbjct: 228 SAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGV 287
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V++ LING CK G+ A R+
Sbjct: 288 FPNVVTFNTLINGFCKEGKLHEANRVF 314
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
N A + ++ M P+++ FN +++ +A+ + M + G+ P++VT N
Sbjct: 237 NKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNT 296
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LIN +C G++ A V +++ PN +T+ TLI G + + +E+
Sbjct: 297 LINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNK 356
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + ++Y LI GLCK G+T+ A +++
Sbjct: 357 VKADILTYNGLILGLCKEGKTKKAAYMVK 385
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+ + P+++ +N ++ + + + I L +ME + DI+T N LI
Sbjct: 309 EANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLI 368
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G+ A ++ ++ K PN TF+ LI G C+ + +RA + ++ G
Sbjct: 369 LGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFS 428
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N+ ++ +L + CK A+++LR
Sbjct: 429 PNENTFRMLASAFCKNEDFDGAVQVLR 455
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ FN ++ K A + +M+ + P++VT N LIN + G + +
Sbjct: 289 PNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGL 348
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + K + +T+ LI GLC + K+A EL + N ++ LI G C
Sbjct: 349 FEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCV 408
Query: 169 VGQTRAALRLLR 180
+ A + R
Sbjct: 409 RNNSERAFLVYR 420
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
+ LF + + + I+ +N ++ L K A + +++ ++P+ T + LI
Sbjct: 345 GIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIA 404
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C AF V +++ G+ PN TF L C N+ A+Q ++L + +
Sbjct: 405 GQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTP 464
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ + +GLC+ G+ + AL L
Sbjct: 465 DSSILSEVYSGLCRCGRKQFALML 488
>Medtr1g034420.1 | PPR superfamily protein | LC |
chr1:12536372-12535170 | 20130731
Length = 400
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ P++ T ILI+C+C G MS AF + I+K G++P T L++GLC Q+ +A+
Sbjct: 146 VFPNVDTWKILIDCHCATGNMSSAFCLFHNIIKAGHRPTASTLNYLLQGLCDRGQISKAI 205
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
F + + +G +L+ SY ILI+ LC +G+ + A LLR
Sbjct: 206 MFFNYSILKGFELDDCSYDILIHCLCGIGEIKMATHLLR 244
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 84.3 bits (207), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 16 LLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSH 75
+LA LH + ++A C+ N +++ P+++ F + K + + A L
Sbjct: 432 ILANGLCKLHRY-----DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR 486
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
ME +G +P+I+T N LI+ YC ++ A + ++++ +G P+ T+++LI G C+
Sbjct: 487 DMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVG 546
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+V AL+ +E+ +GI N +Y +I+GL K G+ A +L
Sbjct: 547 RVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589
Score = 77.0 bits (188), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ +N + L K Y A + + M +G+ P++VT + I YC G ++ A +
Sbjct: 427 VFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR 486
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ K+G PN IT+ TLI C ++VK+A + E++ +G+ + +Y LI+G C VG
Sbjct: 487 DMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVG 546
Query: 171 QTRAALRLL 179
+ AL+L
Sbjct: 547 RVDEALKLF 555
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 21 FSSLHSHSRSLPN--DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME 78
+SS+ S SR L N A LF+ + Q P+ + ++ + K A L +M+
Sbjct: 325 YSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQ 384
Query: 79 FRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
+G+ ++V N ++ YC G+M A + A + K+G + T+ L GLC +
Sbjct: 385 SKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYD 444
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
A + ++ +G++ N V++ + I CK G A RL R
Sbjct: 445 EAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR 486
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 60/115 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + P+II +N ++ K + A + +M +G++PD+ T + LI+ C
Sbjct: 484 LFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGEC 543
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+G++ A + ++ +G N T+T++I GL + A + +DE++ G+
Sbjct: 544 IVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGL 598
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M + I D+ + +I+ LG M AF++ ++ +R PN T+ LI G+C
Sbjct: 312 EMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAG 371
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
Q++ A E+ ++G+ LN V + ++G C+ G+ ALRL
Sbjct: 372 QMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL 414
Score = 53.9 bits (128), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N +L V K + ME ++ + T +ILI Y G + A +
Sbjct: 250 PNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKI 309
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ ++ + + ++++I +KRA DE+ + I N +YG LI G+CK
Sbjct: 310 FEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCK 369
Query: 169 VGQTRAALRLL 179
GQ AA LL
Sbjct: 370 AGQMEAAEILL 380
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 84.3 bits (207), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 81/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ + + +++ P + +N +++ + K + AI + QM R P+ VT N L
Sbjct: 289 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 348
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ A + ++ +G P+ TF TLI+GLCL+ A++ +E+ +G
Sbjct: 349 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 408
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ +Y ILI+ LC + + AL LL+
Sbjct: 409 KPDEFTYSILIDSLCYERRLKEALMLLK 436
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 65/126 (51%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N L LV+ + L +M GI+ D+ T N+LI C Q+ A +L ++
Sbjct: 135 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 194
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G KP+ ITFTTL++G + AL+ ++L G L VS +L+NG CK G+
Sbjct: 195 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 254
Query: 174 AALRLL 179
ALR +
Sbjct: 255 EALRFV 260
Score = 78.6 bits (192), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ +P+ + +N +++ L K A L+ + +G++PD+ T N LI
Sbjct: 326 AIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQ 385
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +A + ++ +G KP+ T++ LI LC ++K AL E+ + G
Sbjct: 386 GLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCAR 445
Query: 155 NQVSYGILINGLCK 168
N V Y LI+GLCK
Sbjct: 446 NAVVYNTLIDGLCK 459
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + FN ++ L +K+ IA+ + +M+ +G PD T +ILI+ C+ ++ A +
Sbjct: 375 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 434
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G N + + TLI GLC + +++ A + D++ G+ + V+Y LI+GLCK
Sbjct: 435 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 494
Query: 169 VGQTRAALRLL 179
+ A +L+
Sbjct: 495 NKRVEEASQLM 505
Score = 70.9 bits (172), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P + FN ++ + + + A+ + M +G PD+ T N LI+ C LG+ A
Sbjct: 269 SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIE 328
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L +++ R PNT+T+ TLI LC ++++ A L+++G+ + ++ LI GLC
Sbjct: 329 ILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC 388
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 74/146 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + + P I F ++ ++ + A+ + QM G + V++ +L+N
Sbjct: 186 AILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVN 245
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G++ A + ++ + G+ P+ +TF +L+ G C V AL D ++ +G
Sbjct: 246 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP 305
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI+G+CK+G+ A+ +L+
Sbjct: 306 DVYTYNSLISGMCKLGEFEKAIEILQ 331
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 59/100 (59%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G PD VT N L+N +C +G ++ A ++ ++++G+ P+ T+ +LI G+C + ++A
Sbjct: 267 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 326
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +++ + N V+Y LI+ LCK + AA L R
Sbjct: 327 IEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 366
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F+++ + + S + +N ++ L K K A L QM G+ PD T N L+
Sbjct: 465 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 524
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C +G + A ++ + G +P+ T+ TLI GLC +V A + + +GI
Sbjct: 525 TYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 584
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
L +Y +I L +T+ +RL R
Sbjct: 585 LTPHAYNPVIQALFMRKRTKEGMRLFR 611
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 41 RLLQMRHTPSIIE--------FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+L++M H+ + E FN ++ L K AI + +M G+ PD +T L
Sbjct: 149 KLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTL 208
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + G ++ A + ++L G ++ L+ G C +V+ AL+F E+ +G
Sbjct: 209 MQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGF 268
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+QV++ L+NG C++G AL ++
Sbjct: 269 SPDQVTFNSLVNGFCRIGNVNDALDIV 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ L K++ A + QME G+ VT N LI+ C ++ A ++ +
Sbjct: 448 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 507
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G KP+ T+ +L+ C +++A + + G + + +YG LI GLC+ G+
Sbjct: 508 MIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGR 567
Query: 172 TRAALRLLR 180
A +LLR
Sbjct: 568 VDVASKLLR 576
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+L L ++ + +L Q++ G +P+ T LI + + ++ +L L G
Sbjct: 70 LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL--G 127
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+KP+T + + L ++++K H +++ +GI L+ ++ +LI LCK Q R A+
Sbjct: 128 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 187
Query: 177 RLL 179
+L
Sbjct: 188 LML 190
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 59/137 (43%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L ++++ P +N +LT + A + M G PDI T LI
Sbjct: 500 EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 559
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G++ VA +L + +G + +I+ L + + K ++ E++ +
Sbjct: 560 GGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDP 619
Query: 154 LNQVSYGILINGLCKVG 170
+ +++ I+ GLC G
Sbjct: 620 PDALTHKIVFRGLCNGG 636
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+ ++AV LF L P I+ ++ ++ L K+ S L M RG DI+
Sbjct: 9 KMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIY 68
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
L++ Q+ A ++L KI RG +P+ T+T L+ GLC N ++K A + + +L+
Sbjct: 69 TSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMV 128
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G N + ++INGLCK G AL +L
Sbjct: 129 KGYHFNACMHNVMINGLCKEGLFDEALFVL 158
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L K K A++L ++ + + PDIV + LI+ C G++S + ++ + RG
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + I +T+L+ L N QV +A+ ++ +GI+ + +Y +L++GLCK G+ + A
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQ 120
Query: 177 RLLR 180
+ R
Sbjct: 121 EVYR 124
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L + + II + +L L K AI+L +++ RGI PD+ T +L
Sbjct: 47 SDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTML 106
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A V ++ +GY N +I GLC AL E+ G
Sbjct: 107 VDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGC 166
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y LI L K A++LLR
Sbjct: 167 TPDVVTYKTLIRALFKNDMNDKAVKLLR 194
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 77/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ P FN ++ L K + A+ ++M +G P+++T ILIN +C
Sbjct: 300 LYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFC 359
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ AF + ++ +G KP+ TF +LI GLC ND+++ AL + ++ +G+ N +
Sbjct: 360 KDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTI 419
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI+ + + A +L+
Sbjct: 420 TYNTLIHAFLRGDSIQQAYKLV 441
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L KT + L +M +GI P I + NIL N +C +G+++ A L
Sbjct: 529 ITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRD 588
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ RG P+ +T+ +LI GLC N +++ AL + L +G+ N V+Y LI+ C
Sbjct: 589 MIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFC 644
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ N +++ P++I + ++ K A + +M +G PDI T N LI
Sbjct: 332 ALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIY 391
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +M A + + G NTIT+ TLI D +++A + +E+L +G L
Sbjct: 392 GLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPL 451
Query: 155 NQVSYGILINGLCKVG 170
+ ++Y LI LCK G
Sbjct: 452 DNITYNGLIKALCKTG 467
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA ++ + P I FN ++ L K A+ L H M G++ + +T N LI
Sbjct: 366 DAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLI 425
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK-----GLCLNDQVKRALQFHDELL 148
+ + + A+ ++ ++L RG+ + IT+ LIK GLC ND+++ L + ++
Sbjct: 426 HAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMF 485
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G+ N ++Y LI+ + + A +L+
Sbjct: 486 LEGVIANTITYNTLIHAFLRGDSIQQAYKLV 516
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 59 TPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYK 118
T L K + L H M G++ + +T N LI+ + + A+ ++ ++L RG+
Sbjct: 466 TGLCKNDKMEETLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFP 525
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ IT+ LIK LC +++ L +E+ +GI + S IL N C +G+ ALR
Sbjct: 526 LDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRF 585
Query: 179 LR 180
LR
Sbjct: 586 LR 587
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+ I +N ++ ++ A L ++M FRG D +T N LI C G + ++
Sbjct: 492 NTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLI 551
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++ +G P+ + L C +V AL+F +++ +G+ + V+Y LINGLCK
Sbjct: 552 EEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLINGLCKN 611
Query: 170 GQTRAALRLL 179
G+ + AL L
Sbjct: 612 GRIQEALNLF 621
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI N + + A+ M RG+ PDIVT N LIN C G++ A ++
Sbjct: 561 PSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNL 620
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ G PN +T+ TLI C D A + ++ G N++++ ILIN K
Sbjct: 621 FNRLQTEGMCPNAVTYNTLISSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILINCFVK 680
Query: 169 VGQ 171
Q
Sbjct: 681 KYQ 683
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 32/157 (20%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKI- 112
FN ++ L K A L +M G D + L+ C +GQ+ A +L+KI
Sbjct: 214 FNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKIP 273
Query: 113 -------------------------------LKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ G++P+ F +I GLC + AL
Sbjct: 274 NPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSAL 333
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+F +E++ +G + N ++Y ILING CK G+ + A ++
Sbjct: 334 EFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQM 370
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ ++ TP I+ +N ++ L K A++L ++++ G+ P+ VT N L
Sbjct: 580 NDALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTL 639
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
I+ +C+ + A +L K + G+ PN IT++ LI
Sbjct: 640 ISSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILI 675
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N +L LV +A ++ + M RGI P + T I++ +C
Sbjct: 163 PTFKSYNVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFC----------- 211
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+TF +I GLC ++ A + D +L G + + YG L+ GLC+
Sbjct: 212 -------------MTFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCR 258
Query: 169 VGQTRAALRLL 179
+GQ A LL
Sbjct: 259 MGQVDEARVLL 269
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L+ + + PS+ F ++ L T + A L +M R I P VT N++I
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC M AF +L +L G P+T T+ LI GLC +V A F D+L + ++L
Sbjct: 542 GYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKL 601
Query: 155 NQVSYGILINGLCKVGQTRAAL 176
N++ Y L++G C G+ AL
Sbjct: 602 NEMCYSALLHGYCGQGRLTEAL 623
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++L +P+ + + L L K + A L H+M +G++ + T NILI +C
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTATYNILIRGFC 788
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
LG++ A VL+++ + G P+ IT++T+I C + V A++ D +L +G++ + V
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848
Query: 158 SYGILINGLCKVGQTRAALRL 178
++ +LI G C G A L
Sbjct: 849 AFNLLIYGCCVNGALDKAFEL 869
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R + + A F R+++ +I +N ++ K S A L +M G+ P T
Sbjct: 406 RGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATT 465
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI+ YC Q+ AF + ++ ++ P+ TFT LI GLC +++ A + DE++
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ I+ +V+Y ++I G CK A LL
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ P+ F +++ K A L +M + I P + T LI C
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+M+ A + ++++R KP +T+ +I+G C + +A + +++L G+ +
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569
Query: 158 SYGILINGLCKVGQTRAA 175
+Y LI+GLC G+ AA
Sbjct: 570 TYRPLISGLCSTGRVSAA 587
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A L+ + M + + ++ ++ K +A S +M GI I N L
Sbjct: 375 DKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSL 434
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C G +S A + K++ G +P TFTTLI G C + QV++A + + E+ + I
Sbjct: 435 INGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ LI GLC + A +L
Sbjct: 495 APSVYTFTALIYGLCSTNEMAEASKLF 521
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ +++ + P+ + +N ++ K + A L M G++PD T LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++S A + + K+ K N + ++ L+ G C ++ AL E++ +GI
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++ V + +LI+G K + LL+
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLK 662
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++VT +N C +G++ A + K+L PN++T+ + L +K A
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
H E+L +G+ N +Y ILI G CK+G+ A ++L
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVL 800
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L K + A L M + + VT +ILI+ +C G + VA S
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++ G + + +LI G C + A + +++ +G++ ++ LI+G CK
Sbjct: 416 FGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475
Query: 169 VGQTRAALRLLR 180
Q A +L R
Sbjct: 476 DLQVEKAFKLYR 487
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+S S +M RGI D+V +LI+ M F +L K+ +G +P+++ +T++I
Sbjct: 622 ALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMID 681
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
K++ + D ++ + N V+Y +NGLCKVG+ A L
Sbjct: 682 AYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFE 732
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
++ + ++ + + + I L ++M G +P ++ L++ G + A+ +
Sbjct: 286 EDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDL 345
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ K+ + G+ PN + LI LC + + +A + + + + LN V+Y ILI+ CK
Sbjct: 346 VVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCK 405
Query: 169 VGQTRAA 175
G A
Sbjct: 406 RGMLDVA 412
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
L +M +G+ PD V +I+ Y G + L ++ PN +T+T + GL
Sbjct: 659 GLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGL 718
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
C ++ RA +++L I N V+YG ++ L K G + A L
Sbjct: 719 CKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV + +L P + + IL L++ + + + + + G+ PD T + +I
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVI 225
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C L A + + + + +T+ LI GLC V AL+ L +G++
Sbjct: 226 RSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLK 285
Query: 154 LNQVSYGILINGLCKVGQ 171
+ V+Y L+ G C+V Q
Sbjct: 286 EDVVTYCTLVLGFCRVQQ 303
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ + P + ++ L + K + A ME IVT N+LI+ C
Sbjct: 205 VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLC 264
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A V + ++G K + +T+ TL+ G C Q + +E++ G +
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+ L++GL K G +A L+
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLV 346
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 78/138 (56%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R L M+ P + +N ++ + K + A L ++M RG+ P++++ + +I+C +G
Sbjct: 234 RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ ++ +V ++ RG +PN TFT+LIKG + +V A+ + ++ +G+ N V+Y
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353
Query: 161 ILINGLCKVGQTRAALRL 178
LI+GLC G A+ +
Sbjct: 354 TLIHGLCSDGNMDEAISV 371
Score = 72.0 bits (175), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 76/151 (50%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R DAV L+N +++ +P+++ +N ++ L + AIS+ +QME I P++ T
Sbjct: 327 RGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTT 386
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ +I + G + A K++ G +PN + +T ++ LC +A D ++
Sbjct: 387 YSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMI 446
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ G +++ I GLC+ G+ A+ +L
Sbjct: 447 SDGCPPTVITFNNFIKGLCRAGRVEWAMNVL 477
Score = 64.3 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
S+ + A L + ++ P++I FN + L + A+++ QME +P+I T
Sbjct: 433 SMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTY 492
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N L++ A ++ ++ +R + + +T+ T++ G N ++ LQ ++L
Sbjct: 493 NELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLV 552
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
GI+L+ ++ +N CK+G+ + A+++L
Sbjct: 553 NGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F R+ + PS+ +N +L L+ + + +L + M+ G+ P++ T N+L+ C
Sbjct: 131 MFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALC 190
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A +L ++ +G P+ +++TT+I +C V +A + LA +
Sbjct: 191 QNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARE-----LAMKFEPVVP 245
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y LI+G+CK + + A L+
Sbjct: 246 VYNALIHGVCKECRFKEAFDLM 267
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 71/142 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L N ++ P++I ++ +++ L + +++++ +M RG P++ T LI
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ G++ A + +++ G PN + + TLI GLC + + A+ +++ I+
Sbjct: 322 KGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR 381
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
N +Y +I G K G +A
Sbjct: 382 PNVTTYSTIIYGFAKSGDLVSA 403
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 69/145 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
++ +F R+ P++ F ++ A+ L + M G+ P++V N LI+
Sbjct: 298 SLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIH 357
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G M A SV ++ K +PN T++T+I G + + A + ++++ G +
Sbjct: 358 GLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRP 417
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V Y +++ LC++ A L+
Sbjct: 418 NVVVYTCMVDVLCQMSMFDQAFDLI 442
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N I+ + + L +M GI D +T+N +N YC LG++ A VL
Sbjct: 525 VTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDN 584
Query: 112 I-LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
I ++ ++ + IT T ++ G+C + A+ + E+L +GI N ++ +L+ G
Sbjct: 585 ISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + ++ L + + A+ L +ME G + VT N L+ C G+++ + +
Sbjct: 136 PDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQI 195
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++K+G PN +T++ LI+ V A++ D+++A+G + N VSY +L+ GLCK
Sbjct: 196 LDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 255
Query: 169 VGQTRAALRLLR 180
G+T A++L +
Sbjct: 256 EGRTEDAIKLFK 267
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA +++ + P + + ++L L ++ A+ + M GI+PD + L
Sbjct: 85 NDAFLQLEQIVGKGNKPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTFL 144
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G + A ++ K+ G+ NT+T+ TL+KGLC+ ++ +++Q D L+ +G+
Sbjct: 145 VNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGL 204
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y ILI K A++LL
Sbjct: 205 VPNVVTYSILIEAAYKERGVDEAMKLL 231
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 81/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + ++ P+++ +N +LT L K AI L ++ +G P +V+ NIL
Sbjct: 225 DEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNIL 284
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C+ G+ A+ ++A + + G P+ +T+ LI L ++ ++++A + DE+ G
Sbjct: 285 LRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGF 344
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+++ SY +I LCK G+ ++ L
Sbjct: 345 KVSANSYNPIIARLCKEGRVDLVVQCL 371
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ LF L + P ++ N +L L + A L M+ G P +VT N+LI
Sbjct: 261 DAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLI 320
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G++ AF VL ++ K G+K + ++ +I LC +V +Q D+++ +
Sbjct: 321 TSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFH 380
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
LN +Y I LC+ G + A +L
Sbjct: 381 LNGGTYNA-IALLCERGMVKEAFLILE 406
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G++P++VT +ILI + A +L I+ +G KPN +++ L+ GLC + +
Sbjct: 202 KGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTED 261
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A++ EL +G + VS+ IL+ LC G+ A L+
Sbjct: 262 AIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELM 301
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
R + +A + RL + ++ P + ++T L + + A + ++M G PD
Sbjct: 394 ERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSY 453
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T + LI C G + A + + + GY P+ + LI GLC + ++ +++ +
Sbjct: 454 TYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMM 513
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G N+++Y IL+ L + A LL
Sbjct: 514 VNKGCMPNEMTYNILVEALAFEEEMELAATLL 545
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N ++ + +RL++ P+++ ++ ++ K + A+ L + +G P++V+ N+L
Sbjct: 190 NQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVL 249
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G+ A + ++ ++G+KP ++ L++ LC + A + + G
Sbjct: 250 LTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQ 309
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +LI L G+ A ++L
Sbjct: 310 APSVVTYNVLITSLSIDGRIEQAFKVL 336
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
R + A+ +F+ + ++ P + + +L LV+ +A+ + Q+ GI+PD+
Sbjct: 168 ERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVY 227
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFH 144
+I++N +C +G++ VA VL K++K G +PN +T+ L+ G + V+R L+
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E +G+ N V+ +L+ G CK G+ A +LLR
Sbjct: 288 SE---RGVSRNVVTCTMLMRGYCKKGKMDEAEKLLR 320
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 71/131 (54%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+++ +N ++ LV Y A+ L H M RG+ P+ ++ +++C+ +G A
Sbjct: 434 TPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMM 493
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ +IL RG+ +T+ F T+I GLC ++ A D + G+ ++++Y L +G C
Sbjct: 494 LWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYC 553
Query: 168 KVGQTRAALRL 178
K G + A ++
Sbjct: 554 KNGNVQEAFQI 564
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGI---MPDIVTLNILINCYCHLGQMSVAFSVLAK 111
NK LVK A ++ ++ I + + + NI I+ C G++ A SVL+
Sbjct: 683 NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSV 742
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ RG+ P+ T+ TLI ++ V A + DE+L +G+ N Y LINGLCK+G
Sbjct: 743 LMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGN 802
Query: 172 TRAALRLL 179
A RL
Sbjct: 803 IDRAQRLF 810
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ + +M G+ ++V N LI YC LGQ+ A V ++ KP+ ++ TL+
Sbjct: 351 AVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLD 410
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G C +V +A +E+L GI V+Y +I GL VG AL L
Sbjct: 411 GYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHL 459
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N + L K+ A S+ + RG +PD T LI+ G + AF + +
Sbjct: 718 IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+L++G PN + LI GLC + RA + +L +G+ N V+Y ILI C++G
Sbjct: 778 MLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837
Query: 172 TRAALRL 178
A RL
Sbjct: 838 LDKASRL 844
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N +L + S A L +M GI P +VT N +I +G A +
Sbjct: 400 PDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHL 459
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++RG PN I+ T++ RA+ E+L +G + V++ +I+GLCK
Sbjct: 460 WHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCK 519
Query: 169 VGQTRAA 175
+G+ A
Sbjct: 520 MGKLMEA 526
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++++ P+++ +N ++ V + + M RG+ ++VT +L+
Sbjct: 245 AMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMR 304
Query: 95 CYCHLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC G+M A +L ++ + + + L+ G C +++ A++ DE+L G++
Sbjct: 305 GYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLK 364
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+N V LI G CK+GQ A R+
Sbjct: 365 VNMVICNTLIKGYCKLGQVCEAERVF 390
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+ SI +N ++ L K + + L +M+ RG+ P++VT LI+ +C ++ AF
Sbjct: 574 SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFH 633
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL------------------- 148
+ ++++RG+ PN + + ++ L +D++ A D++L
Sbjct: 634 LYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKND 693
Query: 149 ----AQGIQ------------LNQVSYGILINGLCKVGQTRAALRLL 179
AQ I N + Y I I+GLCK G+ A +L
Sbjct: 694 LTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L+ +L T S + FN +++ L K A ++ +M+ G+ PD +T L +
Sbjct: 491 AMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSD 550
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G + AF + + ++ + + +LI GL ++ E+ +G+
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N V+YG LI+G C + A L
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHL 634
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DAV + + +L++ +++ N ++ K A + M + PD + N L
Sbjct: 349 EDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTL 408
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC G++S AF + ++L G P +T+ T+IKGL AL ++ +G+
Sbjct: 409 LDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGV 468
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N++S +++ K+G + A+ L +
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWK 496
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+L++ YC +G+M A + ++L+ G K N + TLIKG C QV A + ++
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ + SY L++G C+ G+ A L
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFML 424
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A L +M +G++P+I N LIN C LG + A + K+ ++G PN +T+ LI
Sbjct: 771 AFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIG 830
Query: 130 GLCLNDQVKRALQFHDELLAQGI 152
C + +A + +++ +GI
Sbjct: 831 CYCRIGDLDKASRLREKMTEEGI 853
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L + +L+ P+I +N ++ L K + A L +++ +G++P+ VT NIL
Sbjct: 769 DEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNIL 828
Query: 93 INCYCHLGQMSVAFSVLAKILKRG 116
I CYC +G + A + K+ + G
Sbjct: 829 IGCYCRIGDLDKASRLREKMTEEG 852
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHY-SIAISLSHQMEFRGIMPDIVT 88
+LP+ A+ F +LQ P N+IL LV ++Y A L G+ PD +
Sbjct: 125 NLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKS 184
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
NIL+ +C G +S+A+++ K+ KR P+ ++ L++ LC QV A+ +++L
Sbjct: 185 YNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDML 244
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G + +Y L+N LC+ + R A +LL
Sbjct: 245 NKGFVPDSFTYTTLLNSLCRKKKLREAYKLL 275
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LFN++ + P I + ++ L + + A+ L M +G +PD T L+N
Sbjct: 201 AYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLN 260
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ A+ +L ++ +G P+ + + T+I G C + A + D++ A G
Sbjct: 261 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLP 320
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N VSY L+NGLC +G A + +
Sbjct: 321 NLVSYRTLVNGLCHLGMLDEATKYVE 346
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+S N AV LF +L P + +L L + K A L +M+ +G PDIV
Sbjct: 230 KSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVH 289
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N +I +C G+ A V+ + G PN +++ TL+ GLC + A ++ +E+L
Sbjct: 290 YNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEML 349
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++G + L+ G C VG+ A +L
Sbjct: 350 SKGFSPHFAVIHALVKGFCNVGRIEEACGVL 380
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N ++ SIA +L ++M R ++PDI + IL+ C Q++ A +
Sbjct: 180 PDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDL 239
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L +G+ P++ T+TTL+ LC +++ A + + +G + V Y +I G C+
Sbjct: 240 FEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCR 299
Query: 169 VGQTRAALRLL 179
G+ A +++
Sbjct: 300 EGRAHDACKVI 310
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+ R P+++ N +L L K +A+ + +M G++P++V+ ++ + G M
Sbjct: 184 RFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMD 243
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
A V ++L RG+ P+ ++T L+ G C ++ A++ D + G++ N+V+YG++I
Sbjct: 244 GAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMI 303
Query: 164 NGLCKVGQTRAALRLLR 180
CK ++ A+ L+
Sbjct: 304 QAYCKEKKSGEAVNLIE 320
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIA-ISLSHQMEFRGIMPDIVTLN 90
P A+ F R+ PS+ N +L LV+ K Y +A + + E ++P++V+ N
Sbjct: 136 PVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCN 195
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL+ C ++ VA VL ++ G PN +++TT++ G + A++ E+L +
Sbjct: 196 ILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDR 255
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + SY +L++G C++G+ A+R++
Sbjct: 256 GWSPDVTSYTVLVDGFCRLGKLVDAIRVM 284
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV + + + M P+++ + +L V A+ + ++ RG PD+ + +L++
Sbjct: 210 AVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVD 269
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C LG++ A V+ + G +PN +T+ +I+ C + A+ ++++A+ + +
Sbjct: 270 GFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVV 329
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+++ LC+ G A + R
Sbjct: 330 GSELCCKVVDLLCEEGNVEKACEMWR 355
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
V ++ LI+ C G++ A +V + +G + +T+ TLI GLC ++ A + D+
Sbjct: 368 VVVSTLIHWLCKKGKVLEARNVFDE-FGKGSVASLLTYNTLIAGLCEGGELCEAARLWDD 426
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +G+ N +Y +LI G CKVG + +R+L
Sbjct: 427 MVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLE 460
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 78 EF-RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
EF +G + ++T N LI C G++ A + ++++G PN T+ LIKG C
Sbjct: 392 EFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGN 451
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
K ++ +E+L N+ +Y ILI+G+ +G + +
Sbjct: 452 AKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEI 491
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR-GYKPNTITFTTLIKGLCLN 134
++E GI P + ++N L+N + +AF V +R PN ++ L+K LC
Sbjct: 145 RIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKG 204
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++V+ A++ DE+ G+ N VSY ++ G G A+++ R
Sbjct: 205 NEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFR 250
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S++ +N ++ L + A L M +G+ P+ T N+LI +C +G VL
Sbjct: 400 SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVL 459
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
++L+ PN T+T LI G+ L +K+ +
Sbjct: 460 EEMLENRCLPNKSTYTILIDGILLLGGMKQEIN 492
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + ++ L + + A+ L +ME G + VT N L+ C G+++ + +
Sbjct: 11 PDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQI 70
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++K+G PN +T++ LI+ V A++ D+++A+G + N VSY +L+ GLCK
Sbjct: 71 LDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCK 130
Query: 169 VGQTRAALRLLR 180
G+T A++L +
Sbjct: 131 EGRTEDAIKLFK 142
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 81/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + ++ P+++ +N +LT L K AI L ++ +G P +V+ NIL
Sbjct: 100 DEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNIL 159
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C+ G+ A+ ++A + + G P+ +T+ LI L ++ ++++A + DE+ G
Sbjct: 160 LRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSGF 219
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+++ SY +I LCK G+ ++ L
Sbjct: 220 KVSANSYNPIIARLCKEGRVDLVVQCL 246
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI+PD + L+N C G + A ++ K+ G+ NT+T+ TL+KGLC+ ++ ++
Sbjct: 8 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 67
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+Q D L+ +G+ N V+Y ILI K A++LL
Sbjct: 68 MQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLL 106
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ LF L + P ++ N +L L + A L M+ G P +VT N+L
Sbjct: 135 EDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVL 194
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G++ AF VL ++ K G+K + ++ +I LC +V +Q D+++ +
Sbjct: 195 ITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRF 254
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
LN +Y I LC+ G + A +L
Sbjct: 255 HLNGGTYNA-IALLCERGMVKEAFLILE 281
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
R + +A + RL + ++ P + ++T L + + A + ++M G PD
Sbjct: 269 ERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSY 328
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T + LI C G + A + + + GY P+ + LI GLC + ++ +++ +
Sbjct: 329 TYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMM 388
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G N+++Y IL+ L + A LL
Sbjct: 389 VNKGCMPNEMTYNILVEALAFEEEMELAATLL 420
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G++P++VT +ILI + A +L I+ +G KPN +++ L+ GLC + +
Sbjct: 77 KGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTED 136
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A++ EL +G + VS+ IL+ LC G+ A L+
Sbjct: 137 AIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELM 176
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N ++ + +RL++ P+++ ++ ++ K + A+ L + +G P++V+ N+L
Sbjct: 65 NQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVL 124
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G+ A + ++ ++G+KP ++ L++ LC + A + + G
Sbjct: 125 LTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQ 184
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +LI L G+ A ++L
Sbjct: 185 APSVVTYNVLITSLSIDGRIEQAFKVL 211
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
+RS N+ VCL ++ P ++ + I++ K A SL +M G MP+
Sbjct: 265 DRARSFLNE-VCLNGQV-----APDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPN 318
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
T N LI+ + LG M+ + ++ K+L RG P+ +TFT+LI G + QVK AL+ +
Sbjct: 319 AFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWN 378
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ ++ + + ++ +L+NG CK + A +L
Sbjct: 379 EMNSRKVAASLYTFSVLVNGFCKNNRLHEARDIL 412
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ +++ P+ FN ++ VK + ++++ H+M FRG PD+VT LI
Sbjct: 302 EASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLI 361
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N Y +GQ+ A + ++ R + TF+ L+ G C N+++ A L +
Sbjct: 362 NGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVV 421
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
Y +I+G CK G A ++L
Sbjct: 422 PQSFVYNPVIDGYCKSGNVDEANKIL 447
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LF L+++R+ P N ++ L + A L + G PD++T N +I
Sbjct: 196 EAVDLFWELVRLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTII 255
Query: 94 NCYCHLGQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ +C + ++ A S L ++ G P+ +++TT+I G C ++K A DE++ G
Sbjct: 256 HGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGT 315
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
N ++ LI+G K+G ++L +
Sbjct: 316 MPNAFTFNALIDGFVKLGDMASSLAM 341
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P T+NIL+ C G++ A +L + G P+ IT+ T+I G C +V RA F
Sbjct: 211 PVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSF 270
Query: 144 HDELLAQG-IQLNQVSYGILINGLCKVGQTRAALRLL 179
+E+ G + + VSY +I+G CK+ + + A L
Sbjct: 271 LNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLF 307
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ ++N + + S+ F+ ++ K A + +++ ++P N +I+
Sbjct: 373 ALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVID 432
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G + A +LA++ + KP+ +T+T LI G C ++ A+ D++LA
Sbjct: 433 GYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVCCAP 492
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
++++ L + L K G A R+
Sbjct: 493 DEITINNLRSCLLKAGMPAEAARV 516
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 37/172 (21%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
L M H + +N +L L +T H+ A + M F G +PD L L++ Y +G+
Sbjct: 102 LHMNH--NYWTYNMLLRSLCETNHHRSAKLVYDWMRFDGQVPDSWLLGFLVSSYALIGRF 159
Query: 103 SV-----------------------------------AFSVLAKILKRGYKPNTITFTTL 127
V A + ++++ Y P T T L
Sbjct: 160 DVSKELLVDVQCNNVGVNVVVYNDLFNILIIKNKAREAVDLFWELVRLRYCPVTYTINIL 219
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++GLC ++ A + +L + G + ++Y +I+G C++ + A L
Sbjct: 220 MRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSFL 271
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + + P ++ ++ ++ K++ S A++L ++M RG PDI+ N ++
Sbjct: 13 EAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPDIIIYNSIL 72
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C Q+ A ++L K +G +P+ T+T LI GLC ++++ A +LL +G
Sbjct: 73 DALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYN 132
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y +I+GLC +G AL LL
Sbjct: 133 ITVNTYTDMIHGLCNMGLFDEALALL 158
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ K K AI+L +M+ + I+PD+VT + LI+ +C ++S A +++ ++ RG
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
P+ I + +++ LC N QV +A+ + QGIQ + +Y ILI+GLCK + A
Sbjct: 61 QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDAR 120
Query: 177 RLLR 180
+ +
Sbjct: 121 NIFK 124
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N + P II +N IL L K AI+L + + +GI P + T ILI+
Sbjct: 49 ALNLVNEMHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILID 108
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ A ++ +L +GY T+T +I GLC AL E+
Sbjct: 109 GLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIP 168
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y I+I L + A +++R
Sbjct: 169 NVVTYEIIIRSLFDKDENDKAEKIIR 194
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ + N+L + P I+ + +L+ +VK Y L ++ G++PD+ T N+ I
Sbjct: 273 DALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYI 332
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C A ++ + K G KPN +T+ TL+ LC++ + +A + E+ +G++
Sbjct: 333 NGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVE 392
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
LN +Y I+++GL G+ A LL
Sbjct: 393 LNLHTYRIMLDGLVGKGEIGEACVLLE 419
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ +L + P + +N + L K ++ A+ + ME G P++VT N L+ C
Sbjct: 312 LFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALC 371
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A V+ ++ +G + N T+ ++ GL ++ A +E+L +
Sbjct: 372 MSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSS 431
Query: 158 SYGILINGLCKVGQTRAALRLL 179
++ +++ +C+ G AL L+
Sbjct: 432 TFDSIVHQMCQKGLISDALVLM 453
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N IL L A L H+M R + D VT N LIN YC +G ++ A
Sbjct: 336 PGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKF 395
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+L+ G PN+ T+ LI G C +++ A + +L G N +Y +++ CK
Sbjct: 396 KTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCK 455
Query: 169 VGQTRAALRL 178
T A L L
Sbjct: 456 KDNTDAVLAL 465
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ R++Q P+I +N ++ K++ A + ++ME +G++PDI T N LI YC
Sbjct: 187 VYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYC 246
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G A SV K+ + G + +++ +LI G C +++ A++ E+ + N V
Sbjct: 247 KKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHV 304
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y LI+G CK + ALRL
Sbjct: 305 TYTTLIDGYCKANEFEEALRL 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N ++ K + A+S+ +ME GI DIV+ N LI +C G+M A +
Sbjct: 233 PDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRM 292
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG----------------- 151
+I + PN +T+TTLI G C ++ + AL+ + ++A+G
Sbjct: 293 FGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCS 350
Query: 152 ------------------IQLNQVSYGILINGLCKVGQTRAALRL 178
+Q + V+ LIN CK+G +AL+
Sbjct: 351 DGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKF 395
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + + ++ K + A+ L M +G+ P +VT N ++ C G++ A +
Sbjct: 301 PNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKL 360
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +R + +++T TLI C + AL+F ++L G+ N +Y LI+G CK
Sbjct: 361 LHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCK 420
Query: 169 VGQTRAALRLL 179
+ +A LL
Sbjct: 421 TSELESAKELL 431
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+H + +DAV +F ++ P + ++ L+K S+ + +M G++
Sbjct: 138 IHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVV 197
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+I N LI+ + A +L ++ +G P+ T+ TLI C AL
Sbjct: 198 PNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSV 257
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
D++ +GI L+ VSY LI G CK G+ R A+R+
Sbjct: 258 QDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMF 293
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ ++L+ TP+ + ++ KT A L M G P+ T + +
Sbjct: 390 NSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWI 449
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC ++ + L +G+ N + LI+ LC ++++ A + + +GI
Sbjct: 450 VDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGI 509
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V Y L K G T AA +L
Sbjct: 510 SGDSVIYTSLAFSYWKSGNTNAASDMLE 537
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 36 VCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
VC +R++++ P I +N I+ A+ + ++M+ GIMP+ VT NILI
Sbjct: 657 VC--SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGG 714
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C G + A S L ++L + P IT L+K +++ + LQ H++L+A G++L+
Sbjct: 715 LCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELS 774
Query: 156 QVSYGILINGLCKVGQTRAA 175
Y LI C++G TR A
Sbjct: 775 LTVYNTLITVFCRLGMTRKA 794
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I+ + ++ K + A+S+ +M+ + I D+V N LI LG+ + V
Sbjct: 599 PDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-V 657
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++++ G P+ IT+ T+I C+ + + AL +E+ + GI N V+Y ILI GLCK
Sbjct: 658 CSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCK 717
Query: 169 VGQTRAA 175
G A
Sbjct: 718 TGAVEKA 724
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L N+ V N + ++ P+++ + ++ K + SL +M GIMPD+VT +
Sbjct: 303 LKNNDVVTQNEIKNLQ--PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
++ +C G+++ A + ++ + G PN +++ T+I L + +V A +++ +
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
GI + V+ +++GL KVG+T+ A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEA 445
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF + +M P+ + + I+ L K+ A +L QM RGI DIVT ++
Sbjct: 374 EAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM 433
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +G+ A V ILK PN +T++ L+ G C +++ A ++ + +
Sbjct: 434 DGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVP 493
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N +++ +ING K G A+ +LR
Sbjct: 494 PNVITFSSIINGYAKKGMLSKAVDVLR 520
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F +L++ P+ + ++ +L K +A + +ME + P+++T + +I
Sbjct: 444 EAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N Y G +S A VL ++++R PNTI + LI G + A F E+ ++ ++
Sbjct: 504 NGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLE 563
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V + IL+N L +VG+ A L+
Sbjct: 564 ESNVIFDILLNNLKRVGRMDEARSLI 589
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + +L M P+ I ++ +++ + + ++ G+ + N LI
Sbjct: 724 AESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLIT 783
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C LG A VL +++KRG + +T+ LI+G C V++AL+ + ++ GI
Sbjct: 784 VFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 843
Query: 155 NQVSYGILINGLCKVG 170
N +Y L+ GL G
Sbjct: 844 NITTYNTLLGGLSNAG 859
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LFN +L ++ N ++T Q E + + P +VT LI
Sbjct: 286 AESLFNEILGFWKDEDRLKNNDVVT----------------QNEIKNLQPTLVTYTTLIA 329
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC + + S+ K++ G P+ +T ++++ G C + ++ A E+ G+
Sbjct: 330 AYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDP 389
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N VSY +IN L K G+ A L
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNL 413
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++I F+ I+ K S A+ + +M R +MP+ + ILI+ Y G+ VA
Sbjct: 494 PNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDF 553
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ R + + + F L+ L ++ A ++ ++GI + V+Y LI+G K
Sbjct: 554 CKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFK 613
Query: 169 VGQTRAALRLLR 180
G AAL +++
Sbjct: 614 EGNQLAALSIVQ 625
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + + AV + ++Q P+ I + ++ K +A +M+ R + V
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+IL+N +G+M A S++ + +G P+ + + +LI G AL E+
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628
Query: 149 AQGIQLNQVSYGILINGLCKVGQ 171
+ I+ + V+Y LI GL ++G+
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGK 651
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + L +M RG+ D +T NIL+ YC +G + A V+
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G + I TLI G C + +A + + ++++ V+Y L+ CK G
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282
Query: 172 -TRA 174
TRA
Sbjct: 283 LTRA 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 24 LHSHSRSLPNDAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+ ++SRS D + + +L+ S+ +N ++T + A + +M RGI
Sbjct: 747 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 806
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC----LNDQVK 138
D+VT N LI YC + A +++ G PN T+ TL+ GL + + ++
Sbjct: 807 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMME 866
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ E+ +G+ N +Y IL++G +VG + + L
Sbjct: 867 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIIL 906
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++ +L P + N ++ L K +A+ + I D VT N +I +C
Sbjct: 116 MYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFC 173
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + F +L++++KRG ++IT L+KG C V+ A L+ G+ + +
Sbjct: 174 QKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVI 233
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
LI+G C+ G A L+
Sbjct: 234 GLNTLIDGYCEAGLMSQATELIE 256
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + + +++ + ++ +N ++ H A+ QM GI P+I T N L+
Sbjct: 794 AKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLG 853
Query: 95 CYCHLGQMSVAFSVLAKIL----KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ G M K++ +RG PN T+ L+ G K+ + H E++ +
Sbjct: 854 GLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITK 913
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G +Y +LI+ K G+ A LL
Sbjct: 914 GFVPTLKTYNVLISDYAKSGKMIEARELL 942
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ D++ LN LI+ YC G MS A ++ + K + +T+ TL+K C + RA
Sbjct: 227 GVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRA 286
Query: 141 LQFHDELLA-------------------QGIQLNQVSYGILINGLCK 168
+E+L + +Q V+Y LI CK
Sbjct: 287 ESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCK 333
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 46 RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVA 105
R S + F+ +L L + A SL M +GI PDIV LI+ Y G A
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAA 620
Query: 106 FSVLAKILKRGYKPNTITFTTLIKGLC-LNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
S++ ++ ++ + + + + LIKGL L R + ++ G+ + ++Y +IN
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV--CSRMIELGLAPDCITYNTIIN 678
Query: 165 GLCKVGQTRAALRLL 179
C G+T AL +L
Sbjct: 679 TYCIKGKTEDALDIL 693
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M+ RG P++VT NILIN +C G + A L +L+ KP+ TF+ +I GLC +
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A + +E++ G+ N + Y ILI LC +G+T +++LLR
Sbjct: 61 TEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLR 104
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 43 LQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+Q+R TP+++ FN ++ K A + + PDI T + +I+ C L +
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
AF ++++ G PN I + LI+ LC + R+++ + +GI + SY
Sbjct: 61 TEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNA 120
Query: 162 LINGLCKVGQTRAALRLL 179
LI C++ + A +L
Sbjct: 121 LIQIFCRMNKVEKAKKLF 138
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 69/147 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A FN +++ P+ I +N ++ L + ++ L +M+ GI PDI + N LI
Sbjct: 63 EAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALI 122
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C + ++ A + + K G+ P+ T++ I L + +++ A + + A G
Sbjct: 123 QIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANGCS 182
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++I L + + A +++
Sbjct: 183 PDSYVCNLVIKALVRHDRVEEAQKIVE 209
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ K+ S A+ L +M RG P+I+T N +++ C + A ++
Sbjct: 8 PDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITL 67
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L+K+ +G +PN T+T LI GLC +++ A + + +L +G L+ +Y ++I+G C
Sbjct: 68 LSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAVMIHGFCN 127
Query: 169 VGQTRAALRLL 179
G AL +L
Sbjct: 128 NGLFDEALAML 138
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M + I+PD+V N LI+ +C G++S A ++ ++ RG PN IT+ +++ LC
Sbjct: 1 MHCKNIIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHH 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +A+ +L QGIQ N +Y ILI GLCK G+ A ++
Sbjct: 61 LDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFE 104
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P+II +N IL L K H AI+L +++ +GI P+I T ILI
Sbjct: 29 ALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITLLSKLKDQGIQPNIYTYTILIG 88
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GIQ 153
C G++ A V IL +GY + + +I G C N AL ++
Sbjct: 89 GLCKGGRLEDARKVFEVILVKGYNLDVYAYAVMIHGFCNNGLFDEALAMLSKMTTDNNCN 148
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N + I+I L + A RLL
Sbjct: 149 PNAATNEIIICSLFDKNEIDKAKRLL 174
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
N +M P+ + +N ++ L K+ S A L QM RG D++T N ++ C
Sbjct: 136 LNLFTEMHCKPNTVTYNSLIDGLCKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCK 195
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
Q+ A +++ KI +G +PN T++ LI GLC +++ A +LL +G ++ +
Sbjct: 196 NHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWT 255
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y I+INGLC G A+ LL
Sbjct: 256 YTIMINGLCLEGLFDEAMTLLE 277
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L +++ +I +N L L K AI+L +++ +GI P+I T +ILI+ C
Sbjct: 170 LLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLC 229
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A + +L +GYK T+T +I GLCL A+ +++ G N V
Sbjct: 230 KEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAV 289
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +I+ L K + A +LLR
Sbjct: 290 TYATIIHALFKNDENDKAEKLLR 312
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
VT N L++ YC +++ A +V I KR P ++ +I GLC V AL E
Sbjct: 82 VTYNTLMDGYCLANEVNKAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTE 141
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + N V+Y LI+GLCK G+ A LL
Sbjct: 142 MHCKP---NTVTYNSLIDGLCKSGRISHAWELL 171
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
R + P + + I+IN C + + A ++ ++ KPNT+T+ +LI GLC + ++
Sbjct: 110 RRMTPYVFSYIIIINGLCKIKMVDEALNLFTEM---HCKPNTVTYNSLIDGLCKSGRISH 166
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
A + D++ +G + ++Y ++ LCK Q A+ L++
Sbjct: 167 AWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVK 207
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L+ L+ +P+ + ++ L+K A+ + +M G P+ V NIL
Sbjct: 883 NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + G++ A + K++K G +P+ ++T L++ LC+ ++ A+Q+ +EL G+
Sbjct: 943 INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ VSY +INGL K + AL L
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLF 1029
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAIS 72
PT + F + S P A+ F + + PSI N L L +T S A
Sbjct: 443 PTAFSYVLFIDYYGKSGD-PAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED 501
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
+ + + G+ PD VT N+L+ CY GQ+ A +L++++ +G +P+ + +LI L
Sbjct: 502 IFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY 561
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+V A + L + V+Y IL+ GL K G+ AL L
Sbjct: 562 KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 33 NDAVCLFNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
D + N L +M+ P+I + + L + + A + +M+ G PD++T
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+LI+ C G++ A + K+ + P+ +T+ TL+ ++ +F +E+
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + V+Y ILI LCK G A +L
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDML 398
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 34 DAVCLFNRL-------LQMR---HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C +L ++MR H+P + + ++ K ++ME G
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD+VT ILI C G + AF +L + +G PN T+ T+I GL ++ AL+
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + + G++ SY + I+ K G A+
Sbjct: 433 LENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + P+ +N +L K+K + L +M RG P+ +T NI+I+
Sbjct: 815 ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
++ A + +++ + P T+ LI GL + ++A++ +E+L G
Sbjct: 875 ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP 934
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V Y ILING K G+ A L +
Sbjct: 935 NSVIYNILINGFGKSGEIDFACELFK 960
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 34 DAVCLFNRLLQ-MRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA +F++ + + P++ +N ++ L+ + A+ L M+ G P+ T N+L
Sbjct: 778 DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ + +++ + + +++ RG +PN IT +I L ++ + +AL + EL++
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+YG LI+GL K G++ A+++
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFE 925
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F +L P+ + +N ++ K+ A L +M GI PD+ + IL+
Sbjct: 920 AMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVE 979
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C G++ A ++ G P+T+++ +I GL + ++ AL E+ +GI
Sbjct: 980 CLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP 1039
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ +Y LI L G+ A+++
Sbjct: 1040 DLYTYNALILHLGIAGKVDVAVKM 1063
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA +F + P +I + ++ L A L +M PD VT L
Sbjct: 287 DDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITL 346
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ + +G + ++ GY P+ +T+T LI+ LC + V RA D + +GI
Sbjct: 347 MDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGI 406
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y +I GL K + AL LL
Sbjct: 407 FPNLHTYNTMICGLLKARRLDEALELLE 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV F L P + +N I+ L K++ A+SL +M+ RGI PD+ T N L
Sbjct: 988 DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G++ VA + ++ G +P+ T+ LI+G L+ +A +++ G
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107
Query: 153 QLNQVSYGILINGLCKVG 170
N ++ L N + G
Sbjct: 1108 SPNTETFAQLPNKYPRAG 1125
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 24 LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L +H +S N L++ + P+ I N I++ LVK+ + + A+ L +++
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P T LI+ G+ A + ++L G PN++ + LI G + ++ A +
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+++ +GI+ + SY IL+ LC G+ A++
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ ++ R++ PS+ ++ ++ L + ++L +M+ G+ P+I T I
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I ++ A+ + ++ G P+ IT+T LI LC ++ +A + + ++ A
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
++V+Y L++ KVG R
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRF 362
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +FN L + +P + +N ++ K A L +M +G PD++ +N L
Sbjct: 497 SEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSL 556
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN G++ A+ + ++ P +T+ L+ GL ++ +AL+ + G
Sbjct: 557 INTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGC 616
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N +++ L++ L K AL++
Sbjct: 617 PPNTITFNSLLDCLSKNDAVDLALKMF 643
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 24 LHSHSRSLPNDAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
++ +S D C LF ++++ P + + ++ L T A+ +++ G+
Sbjct: 943 INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD V+ N +IN ++ A S+ +++ RG P+ T+ LI L + +V A++
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++EL G++ + +Y LI G G A + +
Sbjct: 1063 MYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFK 1100
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F RL ++ P+++ +N +LT L K A+ L M G P+ +T N L++C
Sbjct: 572 MFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLS 631
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ +A + ++ P+ +T+ T+I GL ++ A F + + + + + V
Sbjct: 632 KNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQ-MKKFLSPDYV 690
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+ LI G+ + G+ A++++
Sbjct: 691 TLCTLIPGVVRHGRVEDAIKVV 712
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A L + ++ P ++ N ++ L K A + +++ + P +VT NIL
Sbjct: 532 DKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNIL 591
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ G++ A + + + G PNTITF +L+ L ND V AL+ +
Sbjct: 592 LTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNC 651
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
+ ++Y +I GL + G+ A
Sbjct: 652 NPDVLTYNTIIYGLIREGRIDYAF 675
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + + P+ I FN +L L K +A+ + +M PD++T N +I
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIY 663
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQ 153
G++ AF + +K+ P+ +T TLI G+ + +V+ A++ E + Q +Q
Sbjct: 664 GLIREGRIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQ 722
Query: 154 LNQVSYGILINGLCKVGQTRAAL 176
N +G L+ + + A+
Sbjct: 723 TNSQFWGELMECILTEAEIEEAI 745
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L+K + A+ L ME G+ P + + I+ Y G + A
Sbjct: 408 PNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDT 467
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ KRG P+ + L ++ A ++L G+ + V+Y +L+ K
Sbjct: 468 FETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSK 527
Query: 169 VGQTRAALRLL 179
GQ A +LL
Sbjct: 528 AGQIDKATQLL 538
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
+ME G PD+VT NILIN YC ++ AF + + RG PN I+++ L+ GLC
Sbjct: 287 EKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKE 346
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++K A Q ++++ +GI + VSY LI+G CK G R L
Sbjct: 347 GKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSL 391
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F + ++ P+++ N +L L K + + +M GI + T NI+ + C
Sbjct: 216 FWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCR 275
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G L K+ + G++P+ +T+ LI G C +++ A + + +G+ N +S
Sbjct: 276 EGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLIS 335
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y L+NGLCK G+ + A +L
Sbjct: 336 YSALMNGLCKEGKIKEAHQLF 356
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA L+ +++ +R P++I ++ ++ L K A L +QM RGI PD+V+ N L
Sbjct: 316 DAFYLY-KIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTL 374
Query: 93 INCYC-HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I+ YC G+M + S+L +++ G +P+ +T + +G ++ AL EL G
Sbjct: 375 ISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFG 434
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
I++ + Y L+ LCK G+ AA L
Sbjct: 435 IKIPENLYDYLLVALCKEGRPFAARSFL 462
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 25 HSHSRSLPNDAVCLF-NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
H R +D V F ++ + P ++ +N ++ K + A L M RG++
Sbjct: 271 HVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVV 330
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND---QVKRA 140
P++++ + L+N C G++ A + ++++RG P+ +++ TLI G C Q+ R+
Sbjct: 331 PNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRS 390
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L H E++ GI+ + V+ I+ G + G+ +AL ++
Sbjct: 391 L-LH-EMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMV 427
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 37/180 (20%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
LFN+++Q P ++ +N +++ K + SL H+M GI PD VT I+ Y
Sbjct: 355 LFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGY 414
Query: 97 CHLGQMSVAFSVLAKILKRG------------------------------------YKPN 120
G++ A +++A++ + G Y P
Sbjct: 415 TREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPE 474
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+ L + LC + V+ AL E+ + ++LN +Y +I+ LC+V +T A LL
Sbjct: 475 MSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLE 534
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L + + + ++ + I++ L + K S A +L +M GI+PD+ LI
Sbjct: 493 EALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALI 552
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC + A S+L K +T ++ ++K C V ++ D+L+ G
Sbjct: 553 NGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYV 612
Query: 154 LNQVSYGILINGLCK 168
N ++ +I GL K
Sbjct: 613 PNSLTCKYVIRGLQK 627
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ ++ Q P I +N +++ + A+ + ++E PD+++ N LINC
Sbjct: 452 LYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLG 511
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A ++ ++G P+ +T++TLI+ D+V+ A DE++A+G N V
Sbjct: 512 KNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLV 571
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y IL++ L + G+T A+ L
Sbjct: 572 TYNILLDCLERSGRTAEAVDL 592
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV +F L P +I +N ++ L K A +M+ +G+ PD+VT + L
Sbjct: 482 DSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTL 541
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C+ ++ +A S+ +++ G PN +T+ L+ L + + A+ + +L QG+
Sbjct: 542 IECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 601
Query: 153 QLNQVSYGIL 162
+ ++Y +L
Sbjct: 602 TPDSITYAVL 611
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A ++ +L+ ++ I FN +L L K + A + M+ R PD T I+
Sbjct: 205 DKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIM 264
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G+ + ++ +L++G+ N I + T+I+ L +A+ +++ G
Sbjct: 265 IRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGC 324
Query: 153 QLNQVSYGILINGLCKVGQ 171
Q N+ +Y +L+N L GQ
Sbjct: 325 QPNEFTYSVLLNVLVAEGQ 343
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
LL+ ++P+ + + +++ K + A S+ ++M G+ P + + N LI+ + G
Sbjct: 255 LLKEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGD 314
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+S A + K++ G P+ +TFT+LI G C QV L+ +E+ A+ N +Y I
Sbjct: 315 ISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSI 374
Query: 162 LINGLCKVGQTRAALRLLR 180
+I+ LCK + + A LLR
Sbjct: 375 IISALCKSNRLQEAHELLR 393
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +++ PS+ FN ++ VK S A+ + +M G PD+VT LI
Sbjct: 282 EASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLI 341
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC +GQ+ + ++ R + N T++ +I LC +++++ A + L I
Sbjct: 342 DGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIV 401
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
Y +I+G CK G A
Sbjct: 402 PQAFIYNPVIDGYCKSGNVDEA 423
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN-- 90
+DAV LF ++++ FN ++ A + M G PD+V+ N
Sbjct: 180 DDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNTL 239
Query: 91 -----------------------------ILINCYCHLGQMSVAFSVLAKILKRGYKPNT 121
I+I+ YC L M A S+ ++++ G +P+
Sbjct: 240 MTGLCRVNDVDRARDLLKEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSV 299
Query: 122 ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+F LI G + A+ H +++ G + V++ LI+G C+VGQ L L
Sbjct: 300 ASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLEL 356
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
LVK A+SL ++ + D T NILI +C G++ AF L + G P+
Sbjct: 173 LVKCGRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPD 232
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+++ TL+ GLC + V RA +LL + N VSY I+I+G CK+ + A
Sbjct: 233 VVSYNTLMTGLCRVNDVDRAR----DLLKEINSPNDVSYMIVISGYCKLSNMKEA 283
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+N + + ++ ++ I++ L K+ A L + I+P N +I+ YC
Sbjct: 356 LWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYC 415
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +++ + K+ KP+ +TFT LI G C+ + A+ +LA G + V
Sbjct: 416 KSGNVDEANAIVVDMEKKC-KPDKLTFTILIIGHCMKGRAYEAIGIFYRMLATGCSPDDV 474
Query: 158 SYGILINGLCKVGQTRAALRL 178
+ L + L K G A R+
Sbjct: 475 TIRTLSSCLLKSGMPTEAARV 495
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL+ C G++ A S+ +I++ ++ TF LI+G C+ ++ A +F +++
Sbjct: 172 ILVKC----GRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNF 227
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + VSY L+ GLC+V A LL+
Sbjct: 228 GCCPDVVSYNTLMTGLCRVNDVDRARDLLK 257
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 29 RSLPNDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
++ DAV F RL+ R +PS+ N +L LVK + + S +M + P++
Sbjct: 122 ENMVGDAVEAF-RLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVA 180
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T NIL+N C G+ A +L K+ + G+ P +T+ TL+ C + K A + D +
Sbjct: 181 TFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAM 240
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++GI + +Y +LI+ LC+ ++ +LR
Sbjct: 241 ASKGIAADVCTYNVLIDDLCRKSRSAKGYLILR 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L ++ + H P+ + +N +L K Y A L M +GI D+ T N+LI+
Sbjct: 198 AGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLID 257
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C + + + +L ++ K PN IT+ TLI GL ++ A + +E+ +
Sbjct: 258 DLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLP 317
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N V+Y LI G C G ALRL
Sbjct: 318 NSVTYNTLIFGHCSNGNIEEALRL 341
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +++ L + +A L Q+ G+ P++ T N L N + A +L +L+
Sbjct: 801 NVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLE 860
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
GY P FTTLI+G+C VK A++ DE+ G+ V+ +I GL + +T
Sbjct: 861 NGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDE 920
Query: 175 ALRLL 179
A R+L
Sbjct: 921 ATRIL 925
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I +N ++ LVK +A + +M ++P+ VT N LI +C G + A +
Sbjct: 282 PNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ G +PN +T+ L+ G+ + Q + + G+++ +SY +I+GLCK
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCK 401
Query: 169 VGQTRAALRLL 179
G A++LL
Sbjct: 402 NGLLEEAVQLL 412
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A C+ + LL+ + P+ +F ++ + + + A+ L +M+ G+ V ++ +
Sbjct: 849 DEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAI 908
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I + A +L +L+ P TFTTL+ C V +AL+ + +
Sbjct: 909 IRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHV 968
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+L+ +Y +LI+GLC G +AA +L
Sbjct: 969 KLDVAAYNVLISGLCADGDIQAAFKL 994
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+ + ++ L+K H A+ + M G+ PD + N+L++ Y G+MS
Sbjct: 654 SPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVND 713
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L+ + R N T+ L+ G + R + ++E++ G +++++ LI G C
Sbjct: 714 ILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC 773
Query: 168 KVGQTRAALRLLR 180
K G A++ LR
Sbjct: 774 KSGSLDVAVKFLR 786
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 47 HTPSIIEF-------NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
H PS I + N +LT ++ + S A++L +M +PD T LI C
Sbjct: 575 HRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRK 634
Query: 100 GQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G+M A + + +++G PN +T+L+ GL K AL +++L +G+Q + ++
Sbjct: 635 GKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIA 694
Query: 159 YGILINGLCKVGQ 171
+ +L++ + G+
Sbjct: 695 FNVLLDRYSRKGK 707
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+N ++ P + ++ ++ K+ +A+ ++ G D TLN+L++ C
Sbjct: 749 LYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLC 808
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL---CLNDQVKRALQFHDELLAQGIQL 154
++ +AF ++ ++ G PN T+ +L G C D+ + L LL G
Sbjct: 809 ERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILH---ALLENGYAP 865
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ LI G+C++G + A+ L
Sbjct: 866 TCKQFTTLIRGMCRMGNVKGAMEL 889
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
HS++ A+ +F +L P I FN +L + S + M R +
Sbjct: 670 EGHSKA----ALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCF 725
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++ T NIL++ Y M+ + +++ G+ P+ +T+ +LI G C + + A++F
Sbjct: 726 NLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFL 785
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +G +++ + +L++ LC+ + + A L++
Sbjct: 786 RKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVK 821
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F+++ + H PS + +L L+ H + A H+ N ++
Sbjct: 535 AFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLT 594
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQ 153
G +S A ++L +++ + P++ T+T+LI GLC ++ AL + +G +
Sbjct: 595 LTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLS 654
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N Y L++GL K G ++AAL +
Sbjct: 655 PNPAMYTSLVDGLLKEGHSKAALYMFE 681
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 79/146 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +++ + P ++ +N ++ + + A L +M+ RG+ + VT NI+
Sbjct: 333 DEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIM 392
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C G++ A +V+ K+++ G+ P+ T+ T+I G C ++ A + DE+ +G+
Sbjct: 393 IKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGL 452
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+L+ + L++ +C Q A L
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTL 478
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + ++++ +P +N ++ K + A + +M +G+ D TLN L
Sbjct: 403 DEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTL 462
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C Q+ A+++ K KRGY + +T+ TLI G ++Q RAL+ +E+ GI
Sbjct: 463 LHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGI 522
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
++Y +I GLC G+T A+ L
Sbjct: 523 VATIITYNTIIRGLCLSGKTDQAVDKL 549
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN-CYCHLGQMSVAFS 107
P + +N ++ L A+ L +ME ++PD+VT N LI+ C+ H G AF
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGS-DAAFK 372
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ ++ RG K N +T +IK C ++ A +++ G + +Y +ING C
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 168 KVGQTRAALRLL 179
K G+ A +++
Sbjct: 433 KAGKMAEAYKMM 444
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ L N++ + P + +N +LT L K + L QM+ G+ P+ T NIL
Sbjct: 228 EEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNIL 287
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC L + A V+ + +G P+ T+ T+++GLC ++ A++ D++ + +
Sbjct: 288 VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKL 347
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y LI+G + + AA +L+
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVE 375
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L+ + + +II +N I+ L + A+ +++ +G++PD T NI+I+
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G + AF K+++ KP+ T L++GLC +++ L + +++G +
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y I+I+ CK + A L+
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLM 654
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + + + + + ++ K + A+ L +M+ GI+ I+T N +
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G+ A L ++L++G P+ T +I G C V++A QFH++++ +
Sbjct: 533 IRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + + IL+ GLC+ G L L
Sbjct: 593 KPDIFTCNILLRGLCREGMLEKGLTLF 619
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR----------GIMPDIV 87
+FN++ ++R P+++ N +L LV++ SH + F G+ P++
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNS-------SHSLVFSREVFQDAVKLGVQPNVN 212
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T NILI+ YC A ++ ++ + G P+ +T+ T++ LC Q+ + ++
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM 272
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N+ +Y IL++G CK+ + A ++
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIE 305
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 42 LLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
LLQM+++ P+ +N ++ K K A + M +G++PD+ T N ++ C
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G++ A + K+ P+ +T+ TLI G + A + +E+ A+G++ N V+
Sbjct: 329 EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT 388
Query: 159 YGILINGLCKVGQTRAA 175
+ I+I C G+ A
Sbjct: 389 HNIMIKWFCTEGKIDEA 405
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV N LL+ P N I+ A ++M + PDI T NIL
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G + ++ + +G +T+T+ +I C +++ A E+ + +
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ ++ +Y ++ GL K G+T A +L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKL 688
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P++ FN ++ + A+ L +QM G PD VT N ++ C
Sbjct: 198 VFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALC 257
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
Q++ +L ++ G PN T+ L+ G C +K A + + + +G+ +
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y ++ GLC G+ A+RL
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRL 338
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
+ LFN + + +N I++ K + A L +ME + + PD T N ++
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNT-----------ITFTTLIKGLCLNDQVKRALQF 143
G+ A + K ++G + T + ++ I LC + K A++
Sbjct: 675 GLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKL 734
Query: 144 HDELLAQGIQLNQVSYGILINGLCK 168
+ +G+ LN+ +Y L++GL K
Sbjct: 735 FQQAEQKGVSLNKYTYIKLMDGLLK 759
>Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:48037-47705 | 20130731
Length = 110
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+SL ++M R P+ +T + LI+ C G+ S A+ ++ ++ G PN T+ +LI
Sbjct: 5 ALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSLIN 64
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
LC N QV +A+ +++ QGIQ + +Y ILI+GLCK G+ + A
Sbjct: 65 SLCKNYQVDKAIALVNKIKDQGIQPDMFAYNILIDGLCKGGRLQNA 110
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + R P+ I ++ ++ L K +S A L +M G P+I T N L
Sbjct: 3 DEALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSL 62
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
IN C Q+ A +++ KI +G +P+ + LI GLC +++ A
Sbjct: 63 INSLCKNYQVDKAIALVNKIKDQGIQPDMFAYNILIDGLCKGGRLQNA 110
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A S+ ++ R + PNTIT+++LI GLC + A + DE+ G N +Y LIN
Sbjct: 5 ALSLFYEMHCRRFAPNTITYSSLIDGLCKAGRFSCAWELVDEMHDNGQPPNIFTYNSLIN 64
Query: 165 GLCKVGQTRAALRLL 179
LCK Q A+ L+
Sbjct: 65 SLCKNYQVDKAIALV 79
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
H ++L A LF+ ++ T +++ +N +L L + + A +L +M +GI P +
Sbjct: 406 HEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
V+ N LI +C G M A+S+L IL+RG KPN +T+T LI G +RA ++
Sbjct: 465 VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQ 171
++A I ++ +INGL K G+
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGR 549
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ + + + +P +I + ++ L K+ +A+ + M+++G+ D+V + L
Sbjct: 586 DSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSAL 645
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + M A ++L G PNT+ + ++I G + ++ AL H E++ +
Sbjct: 646 IDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ Y +I GL K G+ AL L
Sbjct: 706 PCDLQVYTSIIGGLLKEGKLSLALDL 731
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ I+ L+K S+A+ L +M + I+PDIV +LIN + GQ+ A +L ++
Sbjct: 712 YTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMD 771
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
P+ + + LI G ++ A + HDE+L +G+ + +Y IL+NG KV T
Sbjct: 772 GNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
N ++ + I +N I+ K A+ +M GI PD++T LI+ C
Sbjct: 558 NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKS 617
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ +A + + + +G K + + ++ LI G C ++ A +F ELL G+ N V Y
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVY 677
Query: 160 GILINGLCKVGQTRAALRL 178
+I+G + AAL L
Sbjct: 678 NSMISGFIHLNNMEAALNL 696
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A L+ +++ TPS++ +N ++ K A S+ + RG+ P+ VT +L
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL 505
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G AF V +++ P TF T+I GL +V + + QG
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++Y +I+G K G +AL R
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYR 593
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A + +L+ P+ + + ++ K A + QM I P T N +
Sbjct: 481 DKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTV 540
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN G++S L +K+G+ +IT+ ++I G V AL + E+ GI
Sbjct: 541 INGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGI 600
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ ++Y LI+GLCK + AL +
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEM 626
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L+ R+ M P++ N +L + A L + GI ++VT NIL+
Sbjct: 379 AYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLK 437
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
LG+++ A ++ K++ +G P+ +++ LI G C + +A +L +G++
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497
Query: 155 NQVSYGILINGLCKVGQTRAAL 176
N V+Y +LI+G K G + A
Sbjct: 498 NAVTYTLLIDGFFKKGDSERAF 519
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
++A+ L ++ G++PD+V ++LIN +G M A+ + ++ G +PN +L
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++G + ++ A DE + GI N V+Y IL+ L ++G+ A L
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNL 451
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ LF+ +++ P ++ F+ ++ K A L +M+ GI P++ +N L
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + + A+ + + ++ G N +T+ L+K L +V A ++++++GI
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ VSY LI G CK G A +L+
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
++A L +M G +P T +I G A + +++ G N I +L
Sbjct: 272 NLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSL 331
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+KG C+ V ALQ DE++ G+ + V + +LING KVG A L
Sbjct: 332 MKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYEL 382
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 69/151 (45%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R++ DA L++ +++ + ++ +K + + + RG+ D
Sbjct: 198 RNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAA 257
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+IL+ C +++A +L ++ + G+ P+ T+T +I AL+ DE++
Sbjct: 258 YSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMV 317
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ G+ +N + L+ G C +G AL+L
Sbjct: 318 SVGLPMNVIVTRSLMKGYCVLGDVNLALQLF 348
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L +L+M PS + ++KI T L + A +L + G PD VT I+I
Sbjct: 564 EAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMI 623
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC + A + + +RG P+ +T+T +I G C + ++ A + ++ +GI+
Sbjct: 624 NGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIK 683
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ ++Y ++I GL G T A +L
Sbjct: 684 PDVIAYTVIIKGLLNSGHTEIAFQL 708
Score = 70.5 bits (171), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LFN + TP + + ++ KT A L M+ RGI PD VT I+IN YC
Sbjct: 603 LFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYC 662
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + A + + +RG KP+ I +T +IKGL + + A Q ++E++ G+
Sbjct: 663 KMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGM 717
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A S+ +ME +G++PD+ L++ YC+ A +V ++ RG K N + F+ ++
Sbjct: 314 AESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILH 373
Query: 130 GLCLNDQVKRALQFHD---ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
CL D++ RAL+ D E G+ +++ +Y IL + LCK+G+ A+ +L
Sbjct: 374 --CL-DEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGML 423
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV + + L M+ + + ++ A SL +ME RG PD+V N+L
Sbjct: 417 DDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVL 476
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ A +L + +G +PN+ T +I+GLC +V+ A +F + L + +
Sbjct: 477 AAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESV 536
Query: 153 QLNQVSYGILINGLC------KVGQTRAALRLLR 180
+++ Y L+NG C K + + A LLR
Sbjct: 537 EISVEIYTALVNGYCEAALIEKSHELKEAFILLR 570
Score = 54.7 bits (130), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 56 KILTPLVKTKHYSIAISLSHQMEFRGIM----------PDIVTLNILINCYCHLGQMSVA 105
+I T LV + I SH+++ I+ P V + + C G M A
Sbjct: 541 EIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGA 600
Query: 106 FSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
++ + G+ P+ +T+T +I G C + + A + ++ +GI + V+Y I+ING
Sbjct: 601 HTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMING 660
Query: 166 LCKVGQTRAALRLLR 180
CK+ R A L +
Sbjct: 661 YCKMNCLREAHELFK 675
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N + L K A+ + +++ + D+ LIN Y G+ A S+ ++
Sbjct: 403 YNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEME 462
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+RG+KP+ + + L G N A+ + + +QG++ N ++ I+I GLC G+
Sbjct: 463 ERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVE 522
Query: 174 AA 175
A
Sbjct: 523 EA 524
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I+P+I++ N LIN ++ +A + + G N T+T +IK LC + +
Sbjct: 186 ILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVV 245
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCK 168
+ DE+ G+ + Y I GLCK
Sbjct: 246 RVFDEMKEAGVDDDSYCYATFIEGLCK 272
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 42 LLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LLQ R P+I+ FN ++ LVK +A+ L + + G++ + T I+I C
Sbjct: 177 LLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALC 236
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G V ++ + G ++ + T I+GLC N++ + + +++
Sbjct: 237 KKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKY 296
Query: 158 SYGILINGLC 167
+Y +I G C
Sbjct: 297 AYTAVIRGFC 306
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS + +N ++ + + I + +ME RG+ P VT N LIN +C G ++ A
Sbjct: 355 PSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERW 414
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ K++++G P T+ +LI G + R + +E+ +G++ N SYG LIN LCK
Sbjct: 415 VKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSLINCLCK 474
Query: 169 VGQ 171
G+
Sbjct: 475 DGK 477
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A ++++ +P++ +N ++ T + + ++E +G+ P++ + L
Sbjct: 409 NQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSL 468
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC C G++ A VL ++ RG PN + LI+ C + K A +F +E++ GI
Sbjct: 469 INCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGI 528
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
V+Y LING+ K G+ A L
Sbjct: 529 DATIVTYNTLINGIGKNGRVTEAENLF 555
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
F S+ + LPN C NRLLQ LV +H+ AI+L + +
Sbjct: 107 FYSMKNDGFILPN---CFINRLLQ---------------SLVDLRHFQKAITLFNDVAES 148
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PD + L ++ F ++ + K G +P T + ++ GLC ++K A
Sbjct: 149 GVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDGIRPTTYVYNLVLGGLCKAKKIKDA 208
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ DE++ + + N V++ LI+G CKVG A RL
Sbjct: 209 RKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRL 246
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LFN + + P + K + K + L + ME GI P N+++
Sbjct: 138 AITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDGIRPTTYVYNLVLG 197
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ A V ++++R PNT+TF TLI G C + A + + +
Sbjct: 198 GLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKA 257
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y L++GLC +G+ A R+L
Sbjct: 258 NVVTYNCLLSGLCGLGRLEDAKRVL 282
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +L L K A + ++E G++P V+ NIL+N YC G ++ ++ K
Sbjct: 326 NALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEK 385
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
RG KP+ +TF TLI C + +A ++ +++ +G+ +Y LING
Sbjct: 386 RGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLING 436
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS + FN ++ +T + A +M +G+ P + T N LIN Y F +
Sbjct: 390 PSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEI 449
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+I +G KPN ++ +LI LC + ++ A +++ +G+ N Y +LI C
Sbjct: 450 FEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCS 509
Query: 169 VGQTRAALRLL 179
+ + + A R L
Sbjct: 510 LSKPKDAFRFL 520
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F+ ++Q P+ + FN ++ K A L +M ++VT N L+
Sbjct: 207 DARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLL 266
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C LG++ A VL ++ ++G+ P F++L+ +DQ+ + + L G Q
Sbjct: 267 SGLCGLGRLEDAKRVLLEMERKGFLPR--GFSSLV----FDDQLMSGNE-NGLLNGNGTQ 319
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+++ + L+NGLCKVG+ A +L
Sbjct: 320 VDEWTCNALLNGLCKVGKVEKAKEIL 345
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
S S S P DA N ++Q +I+ +N ++ + K + A +L M +G PD
Sbjct: 507 SCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPD 566
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
++T N L++ Y G + + KRG KP+ TF LI C V +
Sbjct: 567 VITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINS-CRKKGVVTMEKMFQ 625
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
E+L + ++ Y +I G + G A+ L
Sbjct: 626 EMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSL 658
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G D T N L+N C +G++ A +LAK+ G P+ +++ L+ C + +
Sbjct: 317 GTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKG 376
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +E+ +G++ + V++ LIN C+ G A R ++
Sbjct: 377 ILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVK 416
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA + ++ +P+ +N ++ A ++M GI IVT N LI
Sbjct: 480 DAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLI 539
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N G+++ A ++ + ++GYKP+ IT+ +L+ ++ ++ L+ +D + +GI+
Sbjct: 540 NGIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIK 599
Query: 154 LNQVSYGILINGLCKVG 170
+ ++ LIN K G
Sbjct: 600 PSIGTFHPLINSCRKKG 616
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +L M+ P +N+++ + + A+SL QM +GI D VT N LI +
Sbjct: 623 MFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNCLILAHL 682
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++S +L + +G P T+ L+KG C A ++ E+ G LN
Sbjct: 683 RDQRVSEIKHILDDMKAKGLVPKADTYKILVKGHCDLKDFNGAYFWYREMFDSGFILNDC 742
Query: 158 SYGILINGL 166
LI+GL
Sbjct: 743 ICSQLISGL 751
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + P++ + ++ L K A + M RG+ P+ N+LI C
Sbjct: 449 IFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASC 508
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L + AF L ++++ G +T+ TLI G+ N +V A + +G + + +
Sbjct: 509 SLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKGYKPDVI 568
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y L++ G L L
Sbjct: 569 TYNSLMSVYAMSGNPEKCLEL 589
>Medtr1g105580.1 | PPR domain protein | LC | chr1:47566832-47569532
| 20130731
Length = 480
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD T ILI C+ G+MS S+ KI+ G P T T L+ G C Q +A+ F
Sbjct: 231 PDSHTWAILIQCHSRQGKMSSDISLFHKIIDTGDNPTTQTLNHLLVGFCRRRQTDKAMLF 290
Query: 144 HDE-LLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++ +L G LN SY ILINGLC++G+T+ A+ +LR
Sbjct: 291 YNDIILKNGFLLNHDSYLILINGLCEIGETQLAINMLR 328
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ +K A+ + +M G P++VT NI+IN +C + A+ + ++L
Sbjct: 470 YNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEML 529
Query: 114 KRGYKPNTITFTTLIKGLCLN--DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++G+KP+ IT++TLI GLC ++ AL+ + LA+G + + + I+I+ LC G+
Sbjct: 530 EKGWKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGK 589
Query: 172 TRAALRL 178
+ AL+L
Sbjct: 590 VQYALQL 596
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 19 MPFSSLHSHSR-SLPNDAVCLFNRLLQM-RHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P + L ++++ S+P+ A+ LF + ++ R P I FN +L ++ + A
Sbjct: 83 IPLTLLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFFAY 142
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
E G+ P + T N+L+ C G+ A ++ + G KP+ T+ TLI
Sbjct: 143 FETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRD 202
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ AL+ DE+ +G++ + Y I+I+G K+G
Sbjct: 203 LNSALEVFDEMSERGVEPDVACYNIIIDGFFKMG 236
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M RG+ D+VT N ++N C G++ +F + ++ G + N +++ +KGL N
Sbjct: 318 EMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSR-NVVSYNVFLKGLFENG 376
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+V + + L + +YGIL++GLCK G ALR+L
Sbjct: 377 KVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVL 420
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
N A+ +F+ + + P + +N I+ K + + ++ + P +V+ NI
Sbjct: 204 NSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNI 263
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C G+ + + ++ +K + T++ LI GLC + A + ++E++ +G
Sbjct: 264 MISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEEMVLRG 323
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
++ + V+ ++NGLCK G+ + L
Sbjct: 324 VKADVVTCNAMLNGLCKAGKVDESFEL 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L K + + A+ + + RG D + +IN C G++ A VL + KRG K N
Sbjct: 407 LCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLN 466
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ LI G N++V A+Q E+ G N V+Y I+ING C+
Sbjct: 467 AHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCR 514
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV +F + +P+++ +N ++ + + + A +M +G PD++T + L
Sbjct: 484 DSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTL 543
Query: 93 INCYCH--LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+ C + + A + + L +G+KP+ +I LC + +V+ ALQ + + +
Sbjct: 544 IDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKR 603
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
N V++ ++ G K+G A ++
Sbjct: 604 NCA-NLVTHNTIMEGFYKIGDCEKASKI 630
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ ++ L + A + + M+ RG + N LI+ + ++ A V ++
Sbjct: 435 YSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMS 494
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC--KVGQ 171
G PN +T+ +I G C ++ A +E+L +G + + ++Y LI+GLC K+ +
Sbjct: 495 TNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNE 554
Query: 172 TRAALRL 178
ALRL
Sbjct: 555 NDTALRL 561
Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I N ++ L + A+ L M R ++VT N ++ + +G A +
Sbjct: 572 PDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKASKI 630
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
A+I + G KP+ I++ + GLC +V A+ F ++ L G+ +++ IL+ +
Sbjct: 631 WAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILVRAVIF 690
Query: 169 VGQT 172
G++
Sbjct: 691 YGES 694
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 77.8 bits (190), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ +K A+ + +M G P++VT NI+IN +C + A+ + ++L
Sbjct: 470 YNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEML 529
Query: 114 KRGYKPNTITFTTLIKGLCLN--DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++G+KP+ IT++TLI GLC ++ AL+ + LA+G + + + I+I+ LC G+
Sbjct: 530 EKGWKPDLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGK 589
Query: 172 TRAALRL 178
+ AL+L
Sbjct: 590 VQYALQL 596
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 19 MPFSSLHSHSR-SLPNDAVCLFNRLLQM-RHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+P + L ++++ S+P+ A+ LF + ++ R P I FN +L ++ + A
Sbjct: 83 IPLTLLKAYAKTSMPDQALKLFQNMFRVFRCRPGIRSFNTLLNAFAESHQWDRAEKFFAY 142
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
E G+ P + T N+L+ C G+ A ++ + G KP+ T+ TLI
Sbjct: 143 FETAGVEPSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKIRD 202
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ AL+ DE+ +G++ + Y I+I+G K+G
Sbjct: 203 LNSALEVFDEMSERGVEPDVACYNIIIDGFFKMG 236
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M RG+ D+VT N ++N C G++ +F + ++ G + N +++ +KGL N
Sbjct: 318 EMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSR-NVVSYNVFLKGLFENG 376
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+V + + L + +YGIL++GLCK G ALR+L
Sbjct: 377 KVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVL 420
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
N A+ +F+ + + P + +N I+ K + + ++ + P +V+ NI
Sbjct: 204 NSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYNI 263
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C G+ + + ++ +K + T++ LI GLC + A + ++E++ +G
Sbjct: 264 MISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKVYEEMVLRG 323
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
++ + V+ ++NGLCK G+ + L
Sbjct: 324 VKADVVTCNAMLNGLCKAGKVDESFEL 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L K + + A+ + + RG D + +IN C G++ A VL + KRG K N
Sbjct: 407 LCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLN 466
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ LI G N++V A+Q E+ G N V+Y I+ING C+
Sbjct: 467 AHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCR 514
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV +F + +P+++ +N ++ + + + A +M +G PD++T + L
Sbjct: 484 DSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTL 543
Query: 93 INCYCH--LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I+ C + + A + + L +G+KP+ +I LC + +V+ ALQ + + +
Sbjct: 544 IDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKR 603
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
N V++ ++ G K+G A ++
Sbjct: 604 NCA-NLVTHNTIMEGFYKIGDCEKASKI 630
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ ++ L + A + + M+ RG + N LI+ + ++ A V ++
Sbjct: 435 YSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMS 494
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC--KVGQ 171
G PN +T+ +I G C ++ A +E+L +G + + ++Y LI+GLC K+ +
Sbjct: 495 TNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNE 554
Query: 172 TRAALRL 178
ALRL
Sbjct: 555 NDTALRL 561
Score = 48.1 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I N ++ L + A+ L M R ++VT N ++ + +G A +
Sbjct: 572 PDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKASKI 630
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
A+I + G KP+ I++ + GLC +V A+ F ++ L G+ +++ IL+ +
Sbjct: 631 WAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILVRAVIF 690
Query: 169 VGQT 172
G++
Sbjct: 691 YGES 694
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF +++ PS I FN ++ + I SL H M G PD+ T N++IN C
Sbjct: 274 LFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCC 333
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G SVA L ++KRG +P+ TF T++ LC V A + D +LA G+ N
Sbjct: 334 VGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTA 393
Query: 158 SYGILINGLCKVGQ-TRAAL 176
Y +++G K RA+L
Sbjct: 394 IYNTMMDGYVKARDIGRASL 413
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P FN I+ + + AI M G+MPDI T NIL+ YC M A +
Sbjct: 670 PDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDI 729
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ K+ G P+ T+ + G C ++ RA+ DEL++ GI N V+Y ++ G+C
Sbjct: 730 VNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGICS 789
Query: 169 VGQTRAAL 176
RA +
Sbjct: 790 DILDRAMI 797
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I FN ++ K A + ++M G+ PDI T NI ++ YC + +M+ A ++
Sbjct: 705 PDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAI 764
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++ G PNT+T+ T++ G+C +D + RA+ +L+ G N ++ IL++ CK
Sbjct: 765 LDELVSAGIVPNTVTYNTVMGGIC-SDILDRAMIVTAKLIKMGFIPNVITTNILLSHFCK 823
Query: 169 VGQTRAAL 176
G AL
Sbjct: 824 QGMPERAL 831
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +L + P+ +N ++ + A+ + +M RG++PD T NI+
Sbjct: 619 DEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNII 678
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C G M A + + G P+ TF L+ G C + RA +++ G+
Sbjct: 679 IDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGL 738
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y I ++G C V + A+ +L
Sbjct: 739 YPDITTYNIRMHGYCSVRKMNRAIAIL 765
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 14 TFLLAMPFSSLHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAIS 72
TF +A S + ++SR L + A +++ +++ TPS N +L L + A +
Sbjct: 494 TFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEARA 553
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
L H+M +G + V +L + Y + M A + ++ +RG P+ + F+ LI GL
Sbjct: 554 LLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLS 613
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
V A + E+L+ G N +Y LI G C +G+ AL++
Sbjct: 614 KAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKV 659
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M+ RGI PD+V + LI+ G + A+ V ++L G+ PN + +LI G C
Sbjct: 592 EMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLG 651
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
++ +AL+ E+ +G+ + ++ I+I+ C+ G ++A+
Sbjct: 652 RMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAI 692
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F+ ++ L K + A + +M G +P+ N LI +C+LG+M+ A V
Sbjct: 600 PDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKV 659
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ RG P+T TF +I C +K A+ ++ G+ + ++ IL+ G CK
Sbjct: 660 EKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCK 719
Query: 169 V 169
Sbjct: 720 A 720
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%), Gaps = 8/183 (4%)
Query: 2 SVLRYRWFHRNPTFLLAMPFSSLHSHSRSLPN-----DAVCLFNRLLQMRHTPSIIEFNK 56
++ + W RN + + FS L++ R N +A+ + NR+ + PS+
Sbjct: 201 EIVEFMW--RNHDYYES-DFSVLNTLMRGFLNVGMSLEALDILNRMRDVGVRPSVTAMTI 257
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+ L + Y SL M +G P +T N +I +C G++ + S+ + K G
Sbjct: 258 LFKLLFRVGDYGTIWSLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFG 317
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+P+ T+ +I G C+ A+ + ++ +G + + ++ +++ LC+ G A
Sbjct: 318 CEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEAR 377
Query: 177 RLL 179
+L
Sbjct: 378 KLF 380
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P + +N I+ + S+A+ M RG P + T N +++ C
Sbjct: 309 LFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILHSLC 368
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A + ++L G PNT + T++ G + RA + E+ +G+ + V
Sbjct: 369 REGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCV 428
Query: 158 SYGILINGLCKVGQTRAALRLL 179
++ I + G K G+ +LL
Sbjct: 429 TFNIFVGGHYKYGRQEDWTKLL 450
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ + ++M G+ P + + IL +G +S+ ++++G P++ITF T+I
Sbjct: 236 ALDILNRMRDVGVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKGPAPSSITFNTMIC 295
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G C +V + G + + +Y ++ING C G T A+ LR
Sbjct: 296 GFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLR 346
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 65/145 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+R+L + P+ +N ++ VK + A L +M +G+ PD VT NI +
Sbjct: 375 EARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFV 434
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ G+ +L + + G+ + + + C ++ +A++ + LA G+
Sbjct: 435 GGHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLT 494
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ ++ LI + G A +
Sbjct: 495 FSVAAFNSLIAAYSREGLEDKAFEI 519
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L L M T S+ FN ++ + A + H M G P T N L
Sbjct: 479 DQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSL 538
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G++ A ++L ++ ++G+ + +T L G + + A E+ +GI
Sbjct: 539 LMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGI 598
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V++ LI+GL K G A +
Sbjct: 599 YPDVVAFSALIDGLSKAGNVDEAYEVF 625
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
N++ P I +N + + + AI++ ++ GI+P+ VT N ++ C
Sbjct: 731 NKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGICS- 789
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
+ A V AK++K G+ PN IT L+ C +RAL + +L +++SY
Sbjct: 790 DILDRAMIVTAKLIKMGFIPNVITTNILLSHFCKQGMPERALLWGQKLRDICFDFDEISY 849
Query: 160 GIL 162
IL
Sbjct: 850 IIL 852
>Medtr2g072170.1 | PPR containing plant-like protein | HC |
chr2:30300092-30302292 | 20130731
Length = 540
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+++H + A+ L N + PSI FN +L LV +K Y + L G+
Sbjct: 126 IYAHKAQRIDKAIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYDVVFDLYASALKLGVE 185
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D LNI+I C G+M AF V + K G K N TF T++ GLC V
Sbjct: 186 IDACCLNIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKGMVDEGFGL 245
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +GI ++ V Y +LI+GL K G+ + +L
Sbjct: 246 LERMKEEGIVVDVVVYNVLIHGLVKNGRVDEGVTVLE 282
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN I K + AI L ++M G P I T N ++N + V F + A L
Sbjct: 121 FNLIKIYAHKAQRIDKAIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYDVVFDLYASAL 180
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K G + + +IKGLC +++ A + DE G++ N+ ++ ++NGLC+ G
Sbjct: 181 KLGVEIDACCLNIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKGMVD 240
Query: 174 AALRLLR 180
LL
Sbjct: 241 EGFGLLE 247
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +FN +LQ P +I F+ I+ + A++ +M+ G++PD V ILI
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC +S A V ++++R + +T+ TL+ GLC + A + E++ +G+
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 313
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ + LI+G CK G AL L
Sbjct: 314 PDFYTLTTLIHGYCKDGNMTKALSLFE 340
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 73/134 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A C+ +++L + P FN +L + + A + ++M G++PD+++ + +I
Sbjct: 160 AKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIG 219
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G++ A + K+ G P+T+ +T LI G C N+ V AL+ +E++ + +
Sbjct: 220 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVM 279
Query: 155 NQVSYGILINGLCK 168
+ V+Y L+NGLC+
Sbjct: 280 DVVTYNTLLNGLCR 293
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L K Y A + +M G PD T N ++ + A V
Sbjct: 139 PGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERV 198
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L+ G P+ I+F+++I N ++ RAL + +++ G+ + V Y ILING C+
Sbjct: 199 FNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 258
Query: 169 VGQTRAALRL 178
AL++
Sbjct: 259 NNDVSGALKV 268
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
++PD+VT N ++ + G+M A VL K++ +G P+ T+T++I G D +K A
Sbjct: 426 LLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAF 485
Query: 142 QFHDELLAQG 151
+ HDE+L +G
Sbjct: 486 RVHDEMLQRG 495
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 30/157 (19%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
N +++ ++ +N +L L + K A L +M RG+ PD TL LI+ YC
Sbjct: 270 NEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 329
Query: 100 GQMSVAFSVLAKI----------------LKRGYKPNTITFTTLIKGLC----------- 132
G M+ A S+ I + R P+ I+F+ LI G C
Sbjct: 330 GNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIK 389
Query: 133 ---LNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
V +A F + ++++G+ + ++Y LIN L
Sbjct: 390 GYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRL 426
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I ++ I+ + A + +M G+MP++ LI YC LGQM S+
Sbjct: 664 PTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESI 723
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +PN IT+T +I G C K A + +E++A GI + V+Y +L G CK
Sbjct: 724 LQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCK 783
Query: 169 VGQTRAALR 177
+ L+
Sbjct: 784 ENELEETLQ 792
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF ++ + P+++ +N ++ L K+ A+ +M + P +VT IL
Sbjct: 262 DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGIL 321
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N + A SVL ++ +G+ PN F LI G + AL+ D++ +G+
Sbjct: 322 VNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL 381
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V++ L+ G C+ Q A ++L
Sbjct: 382 KPNAVTHNTLLQGFCRTNQMEQAEQVLE 409
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ R+++ + PS++ + ++ LVK + + A S+ +M +G P+ N LI
Sbjct: 298 EALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALI 357
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y G M A V + +G KPN +T TL++G C +Q+++A Q + LL+ +
Sbjct: 358 DGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLS 417
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+N+ + +++ LCK + +AL++++
Sbjct: 418 VNEDACSYVLHLLCKSSKFDSALKIVK 444
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LFN+L+ + S + +N ++ K +++ A L M I P I T + +
Sbjct: 613 DNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSI 672
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A + ++ G PN +T LI G C Q+ + E+ + I
Sbjct: 673 IHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCI 732
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q N+++Y I+I+G CK+G T+ A +LL
Sbjct: 733 QPNKITYTIMIDGYCKMGNTKEATKLL 759
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ N +++ LVK+ + + M G++ D+ T IN YC G++ A +
Sbjct: 208 PSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGL 267
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ + G PN +T+ LI GLC + +++ AL F ++ + + V+YGIL+NGL K
Sbjct: 268 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 327
Query: 169 VGQTRAALRLL 179
+ A +L
Sbjct: 328 FEKFDEANSVL 338
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I + +L A+SL +++ + + V NILI + G + AF +
Sbjct: 594 PNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKL 653
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ P T++++I G+C ND V+ A +E+ +G+ N Y LI G CK
Sbjct: 654 RDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCK 713
Query: 169 VGQ 171
+GQ
Sbjct: 714 LGQ 716
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ K+ A L +M +G PD T N L+ G+M VL +
Sbjct: 527 ISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHE 586
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
G PN T+ +++G C D++ A+ ++L+ ++L+ V Y ILI K G
Sbjct: 587 AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGN 646
Query: 172 TRAALRL 178
A +L
Sbjct: 647 FTEAFKL 653
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +L L + + + +M RG++ D ++ N LI C G++ AF + K++K
Sbjct: 495 NALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMK 554
Query: 115 RGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+G+KP+T T+ L+KGL D V R L E G+ N +Y +++ G C +
Sbjct: 555 QGFKPDTYTYNFLMKGLADKGKMDDVGRVLH---EAKDHGVVPNIYTYALMLEGYCNADR 611
Query: 172 TRAALRLL 179
A+ L
Sbjct: 612 IDNAVSLF 619
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L +A +F + P++ + ++ K S+ +M I P+ +T
Sbjct: 680 DLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITY 739
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
I+I+ YC +G A +L +++ G P+T+T+T L KG C ++++ LQ
Sbjct: 740 TIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGD----- 794
Query: 150 QGIQLNQVSYGILINGL 166
+ L +++Y L++ L
Sbjct: 795 TAVPLEEITYTTLVDKL 811
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G+ + T N L+ C G M F V ++++RG + I++ TLI G C + +++
Sbjct: 485 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 544
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A + ++++ QG + + +Y L+ GL G+ R+L
Sbjct: 545 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVL 584
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 39 FNRLLQMRHTPSIIEF-------------NKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
F R QM ++E+ + +L L K+ + A+ + + R I +
Sbjct: 395 FCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVN 454
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKIL-KRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
L +L+ C G+ A + ++ K+G NT T L+ GLC ++
Sbjct: 455 DSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVC 514
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
E++ +G+ L+ +SY LI G CK G+ A +L
Sbjct: 515 KEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKL 548
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G+ P + + N L++ ++ +F V + + G + T+ T I C ++
Sbjct: 204 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 263
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
A+ ++ G+ N V+Y LI+GLCK G+ AL
Sbjct: 264 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL 300
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 1 MSVLRYRWFH-RNPTFLLAMP-FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKIL 58
+SV+ R F N TF L + FS +R+L F RL+ M P++I F ++
Sbjct: 168 LSVMLERGFVVDNATFTLIISRFSGKGYTTRAL-----WYFRRLVDMGLEPNLINFTCMI 222
Query: 59 TPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK-RGY 117
L K A + +M +G P++ T LI+ C G AF + K+++ +
Sbjct: 223 EGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENH 282
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
KPN +T+T +I G C D++ RA + QG+ N +Y LI+G CK G A
Sbjct: 283 KPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYD 342
Query: 178 LL 179
L+
Sbjct: 343 LM 344
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMR-HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
LF +L++ H P+++ + +++ + + A L +M+ +G++P+ T LI+ +
Sbjct: 272 LFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGH 331
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G A+ ++ + G+ PN T+ ++ GLC +V+ A + ++ G++ ++
Sbjct: 332 CKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDK 391
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
+Y IL++ CK R AL L
Sbjct: 392 FTYNILMSEHCKQENIRQALALF 414
Score = 67.4 bits (163), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 51 IIEF-NKILTPLVKTKHYSIAIS-----------LSHQMEFRGIMPDIVTLNILINCYCH 98
+IE N+ L P +T ++ I ++ L +M RG+ PD ++ +++ YC
Sbjct: 98 VIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCK 157
Query: 99 LGQMSVAFSVLAKILKRGY-----------------------------------KPNTIT 123
+G + A L+ +L+RG+ +PN I
Sbjct: 158 IGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLIN 217
Query: 124 FTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
FT +I+GLC +K+A + +E++ +G + N ++ LI+GLCK G T A RL
Sbjct: 218 FTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A L +R+ + P+ + ++ K ++ A L + M G P++ T N +
Sbjct: 303 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 362
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G++ A+ +L + G KP+ T+ L+ C + +++AL +++L GI
Sbjct: 363 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 422
Query: 153 QLNQVSYGILINGLCK 168
Q + SY LI C+
Sbjct: 423 QPDIHSYTTLIAVFCR 438
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + +P++ +N I+ L K A + G+ PD T NIL++ +C
Sbjct: 343 LMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 402
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A ++ K+LK G +P+ ++TTLI C +++K + F +E + GI
Sbjct: 403 KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNK 462
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +I G C+ G A++
Sbjct: 463 TYTSMICGYCREGNLTLAMKFF 484
Score = 60.8 bits (146), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 64/130 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N +++ K ++ A++L ++M GI PDI + LI +C +M +
Sbjct: 389 PDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMF 448
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ G P T+T++I G C + A++F L G + ++YG +I+GLCK
Sbjct: 449 FEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCK 508
Query: 169 VGQTRAALRL 178
+ A L
Sbjct: 509 QSKRDEARSL 518
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 67/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LFN++L++ P I + ++ + + + GI+P T +I
Sbjct: 410 ALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMIC 469
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G +++A ++ G P++IT+ +I GLC + A +D ++ +G+
Sbjct: 470 GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 529
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+V+ L CKV +A+ +L
Sbjct: 530 CEVTRITLAYEYCKVDDCLSAMVIL 554
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
++ M+ PSI + +I+ L+K + A + + ++ RG PD V +I +C +G
Sbjct: 262 MIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGL 321
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
++ A + +++++G PN T+ +I G C A + +D++ +G N VSY
Sbjct: 322 LAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYST 381
Query: 162 LINGLCKVGQTRAALRLL 179
+I+GL G+T AL L
Sbjct: 382 MISGLYLHGKTDEALSLF 399
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A +FN L + P + + ++ + A L +M +G++P+ T
Sbjct: 284 RRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYT 343
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N++I YC + + A + + RGY N ++++T+I GL L+ + AL E+
Sbjct: 344 YNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMS 403
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+GI + +SY LI GLC+ G+ A LL
Sbjct: 404 RKGIARDLISYNSLIKGLCQEGELAKATNLL 434
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L+ ++Q P+ +N ++ K + ++ A L M RG ++V+ + +I
Sbjct: 324 EARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMI 383
Query: 94 N-CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ Y H G+ A S+ ++ ++G + I++ +LIKGLC ++ +A ++LL QG+
Sbjct: 384 SGLYLH-GKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGL 442
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + S+ LI LCKVG T A+RLL+
Sbjct: 443 EPSVSSFTPLIKCLCKVGDTEGAMRLLK 470
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN ++ K K Y + H M P I T +IN + AF V +
Sbjct: 239 FNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLK 298
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
RGY P+ + +TT+IKG C + A + E++ +G+ N+ +Y ++I G CKV
Sbjct: 299 DRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFA 358
Query: 174 AALRL 178
A +L
Sbjct: 359 EARKL 363
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L++ + + +++ ++ +++ L A+SL H+M +GI D+++ N LI
Sbjct: 359 EARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLI 418
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G+++ A ++L K+L +G +P+ +FT LIK LC + A++ ++ + ++
Sbjct: 419 KGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLE 478
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ +I GL K G + L
Sbjct: 479 PIASTHDYMIIGLSKKGDFAQGMEWL 504
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM--EFRGIMPDIVTLNILINC 95
+F L ++ PS FN L +K + L M G+ D+ T+ LI
Sbjct: 151 VFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKA 210
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C ++ + +L ++L++G + F LI G C Q R + ++A +
Sbjct: 211 FCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPS 270
Query: 156 QVSYGILINGLCKVGQTRAALRLL 179
+Y +INGL K + A R+
Sbjct: 271 IYTYQEIINGLLKRRKNDEAFRVF 294
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F + ++ P II FN ++ + A L +M+ ++PD VT N L+ YC
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
++ A +L ++ +RG KP+ I++ TLI G +K AL+ DE+L+ G ++
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLT 569
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y LI G K+G+ A LLR
Sbjct: 570 YNALIQGYSKIGEADHAEELLR 591
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 76/145 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF+ +++ P++ + ++ K S A + G++PDI+ N LI+
Sbjct: 411 ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALID 470
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G + AF +L ++ P+ +TF TL++G C +V+ A + DE+ +GI+
Sbjct: 471 GHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP 530
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ +SY LI+G K G + AL +
Sbjct: 531 DHISYNTLISGYSKRGDMKDALEVF 555
Score = 72.8 bits (177), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ +++M SI+ FN ++ L + + A ME G+ P++VT N +IN YC
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ A + + + KP+ T+ + I LC +++ A +LL G+ N V
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y LI+G C G A
Sbjct: 324 TYNALIDGCCNKGDLDKAF 342
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + P +N ++ L K + A + ++ G++P+ VT N LI+ C
Sbjct: 274 IFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCC 333
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ G + AF+ +++ RG + T+ LI L L +++ A E+ +G++ + V
Sbjct: 334 NKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVV 393
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y I ING C+ G + AL L
Sbjct: 394 TYNIQINGYCRCGNAKKALSLF 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ +N ++ L K A + +M +G+ PD+VT NI IN YC G A S+
Sbjct: 356 SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLF 415
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++++ +P T+T+LI +++ A + + + +G+ + + + LI+G C
Sbjct: 416 DEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVN 475
Query: 170 GQTRAALRLLR 180
G A +LL+
Sbjct: 476 GNIDRAFQLLK 486
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L + + P + FN ++ + + A L +M+ RGI PD ++ N LI+
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y G M A V ++L G+ P +T+ LI+G + A + E+ ++GI
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600
Query: 155 NQVSYGILINGL 166
+ +Y +I +
Sbjct: 601 DDSTYLYVIEAM 612
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 61/124 (49%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+LL+ P+ + +N ++ A + +M RGI+ + T N+LI+
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A ++ ++ ++G +P+ +T+ I G C K+AL DE++ + I+ +Y
Sbjct: 372 RIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 161 ILIN 164
LI+
Sbjct: 432 SLID 435
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 6 YRWFHRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK 65
YR P+F + P LH+ + ++ + + L L ++ T + F+ +L+ + +
Sbjct: 107 YRLPSPKPSFHILQPI--LHTTTPTVIFNELSLARNRLNVKTT---LVFDLLLSAYCQFR 161
Query: 66 HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT 125
A+ + M+ I+P T N L++ L ++ +A+ V +++K K + +TF
Sbjct: 162 KPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFN 221
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+I LC + K+A F + G++ N V+Y +ING C G+ AA ++ +
Sbjct: 222 IMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFK 276
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F RL+ M P++I F ++ L K A + +M +G P++ T LI+
Sbjct: 217 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 276
Query: 95 CYCHLGQMSVAFSVLAKILK-RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G AF + K+++ +KPN +T+T +I G C D++ RA + QG+
Sbjct: 277 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 336
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N +Y LI+G CK G A L+
Sbjct: 337 PNTNTYTTLIDGHCKAGNFERAYDLM 362
Score = 70.9 bits (172), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
LS +E RG + D T ++I+ +C G + A +++ G +PN I FT +I+GLC
Sbjct: 186 LSAMLE-RGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLC 244
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+K+A + +E++ +G + N ++ LI+GLCK G T A RL
Sbjct: 245 KRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF 291
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 58/107 (54%)
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
L +M RG+ PD V+ +++ YC +G + A L+ +L+RG+ + TFT +I C
Sbjct: 150 LFEEMCVRGVQPDSVSYRVMVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFC 209
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
RAL + L+ G++ N +++ +I GLCK G + A +L
Sbjct: 210 EKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEML 256
Score = 68.2 bits (165), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMR-HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
LF +L++ H P+++ + +++ + + A L +M+ +G++P+ T LI+ +
Sbjct: 290 LFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGH 349
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G A+ ++ + G+ PN T+ ++ GLC +V+ A + ++ G++ ++
Sbjct: 350 CKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDR 409
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
+Y IL++ CK R AL L
Sbjct: 410 FTYNILMSEHCKQANIRQALVLF 432
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + +P++ +N I+ L K A + G+ PD T NIL++ +C
Sbjct: 361 LMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHC 420
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + K++K G +P+ ++TTLI C +++K + F +E + GI
Sbjct: 421 KQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNR 480
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y +I G C+ G A++
Sbjct: 481 TYTSMICGYCREGNLTLAMKFF 502
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A L +R+ + P+ + ++ K ++ A L + M G P++ T N +
Sbjct: 321 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAI 380
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G++ A+ +L + G KP+ T+ L+ C +++AL ++++ GI
Sbjct: 381 VNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGI 440
Query: 153 QLNQVSYGILINGLCK 168
Q + SY LI C+
Sbjct: 441 QPDIHSYTTLIAVFCR 456
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N +++ K + A+ L ++M GI PDI + LI +C +M +
Sbjct: 407 PDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMF 466
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ G P T+T++I G C + A++F L G + ++YG +I+GLCK
Sbjct: 467 FEEAVRIGIIPTNRTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCK 526
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 67/145 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LFN++++ P I + ++ + + + GI+P T +I
Sbjct: 428 ALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMIC 487
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G +++A ++ G P++IT+ +I GLC ++ A +D ++ +G+
Sbjct: 488 GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSMIEKGLVP 547
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+V+ L CKV +A+ +L
Sbjct: 548 CEVTRITLAYEYCKVDDCLSAMVIL 572
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
T + +N ++ K K A++L +M + I+PD+VT N LI+ C G++S A
Sbjct: 7 THDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYALK 66
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
++ ++ RG P+ IT+ +++ LC N QV +A+ +L QGI+ N ++ ILI+G
Sbjct: 67 LVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTILIDG 124
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + P ++ +N ++ + K+ S A+ L +M RG +PDI+T N +
Sbjct: 27 DEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYALKLVDEMNDRGQLPDIITYNSI 86
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C Q+ A ++L K+ +G +PN T T LI G AL ++
Sbjct: 87 LNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTILIDG---------ALALLSKMKDNNC 137
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
N V+Y I+I L A RL
Sbjct: 138 YPNAVTYRIIIRSLFDKNDNDKAERL 163
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 60/103 (58%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M RG+ D+ + NI+IN +C + ++ A ++ ++ + P+ +T+ +LI G+C + +
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ AL+ DE+ +G + ++Y ++N LCK Q A+ LL
Sbjct: 61 ISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALL 103
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P +N ++ K K A++L +M + I+P++VT LI+ C G++S A
Sbjct: 7 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 66
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL--------QFHDELLAQGIQLNQVSY 159
++ ++ RG P+ IT+++++ LC N QV +A+ Q ++L +G L+ +Y
Sbjct: 67 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAY 126
Query: 160 GILINGLCKVGQTRAALRLL 179
++I G C G AL LL
Sbjct: 127 TVMIQGFCVKGLFNEALALL 146
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 60/99 (60%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PD + NI+IN +C + ++ A ++ K+ + PN +T+T+LI GLC + ++ A
Sbjct: 5 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 64
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L+ DE+ +G+ + ++Y +++ LCK Q A+ LL
Sbjct: 65 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 103
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ P+++ + ++ L K+ S A+ L +M RG+ PDI+T + +
Sbjct: 27 DEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSI 86
Query: 93 INCYCHLGQMSVAFSVLAK--------ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++ C Q+ A ++L K + +GY + +T +I+G C+ AL
Sbjct: 87 LDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 146
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ G + +Y I+I L K + A +LLR
Sbjct: 147 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLR 182
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ NR+ + P ++ +N + + V+ ++ L +M GI PD+ + NIL++CY
Sbjct: 64 ILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYF 123
Query: 98 HLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
LG+ A V I +RG P+ ++ +I GLC N V AL L +G
Sbjct: 124 RLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEV 183
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++Y +INGLCK + A R+L
Sbjct: 184 LTYNAMINGLCKARRLADARRVL 206
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 24 LHSHSR-SLPNDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
+H + R P +A +F + + PS+ +N ++ L K + + A+ L + RG
Sbjct: 119 MHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRG 178
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+P+++T N +IN C +++ A VL + G++PN IT+TT++K ++++ L
Sbjct: 179 FVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGL 238
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ E+ +G + +Y ++ L K G+ A
Sbjct: 239 EILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEA 272
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ LVKT A ++ +M G++PD+ + N +IN +C G+ A ++ +I K+G
Sbjct: 259 VVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQG 318
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
K + T T +I GLC + + A + D + G N V++ +++ L K G A+
Sbjct: 319 MKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAV 378
Query: 177 RLL 179
++
Sbjct: 379 KVF 381
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ LF L + P ++ +N ++ L K + + A + ++ G P+ +T +
Sbjct: 165 NNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTV 224
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G++ +L+++ ++G+ + + T++ L +++ A + +++++ G+
Sbjct: 225 MKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGL 284
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ SY +IN C+ G+ ALRL+
Sbjct: 285 VPDLASYNTMINLFCRQGRFDEALRLV 311
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 57/100 (57%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PDI+T N LI+ YC + A+++L ++ + G P+ +++ +L G ++++
Sbjct: 37 GLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQKS 96
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L DE+L GI+ + SY IL++ ++G+ A + R
Sbjct: 97 LDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFR 136
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 3/164 (1%)
Query: 19 MPFSSLHSHS--RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+ ++SL S + + L ++ LF+ +LQ P + +N ++ + A +
Sbjct: 78 VSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRD 137
Query: 77 MEFRG-IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+ RG I P + + N++IN C G ++ A + + +RG+ P +T+ +I GLC
Sbjct: 138 IFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKAR 197
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ A + +E G + N ++Y ++ + G+ L +L
Sbjct: 198 RLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEIL 241
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+ ++ P+ I +N ++ K + A L M I P++VTLN L++ C +G++
Sbjct: 308 EKKNKPNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVF 367
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
A ++ +G K N +T+T LI C + + +A+Q+ DE+L+ G + + Y LI
Sbjct: 368 SAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLI 427
Query: 164 NGLCKVGQTRAA 175
+GL G+ A
Sbjct: 428 SGLTIAGRMGDA 439
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N +++ K K + ++ME G+ PDIVT N L++ G + A V+ K++
Sbjct: 458 YNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMI 517
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQVSYGILINGLCKVGQT 172
K G KP+ +T+ +I CL + A++ E+ + + N V Y ILI+ LCK
Sbjct: 518 KEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDV 577
Query: 173 RAALRLL 179
A+ L+
Sbjct: 578 ERAVSLM 584
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N + + P I+ +N +++ L K ++ A + +M G+ P +VT +I+ YC
Sbjct: 477 MLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYC 536
Query: 98 HLGQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
+ A + ++ PNT+ + LI LC N+ V+RA+ D++ +G+Q N
Sbjct: 537 LKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNT 596
Query: 157 VSYGILINGL 166
+Y + G+
Sbjct: 597 TTYNAIFKGV 606
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEF-RGIMPDIVTLNILINCYCHLGQMSVAFS 107
P ++ +N ++ L K ++L +M+ + P+ +T N LI+ +C G + A
Sbjct: 277 PDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDKARE 336
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + + +PN +T TL+ G+C +V A++F +E+ +G++ N V+Y LI+ C
Sbjct: 337 LFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFC 396
Query: 168 KVGQTRAALR 177
V A++
Sbjct: 397 GVNNIDKAMQ 406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 43/185 (23%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + ++++ T N +LT L + + L +ME I P ++T ILIN +C
Sbjct: 189 LLHAVIKLGGTVEAASCNALLTGLGRERDIHKMNELLAEMEEMKIHPSVITFGILINQFC 248
Query: 98 HLGQMSVAFSVLAKILKRGY---------------------------------------- 117
++ A V K+ +G
Sbjct: 249 KSRRIDEALGVFDKLRGKGREKKWIGVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTE 308
Query: 118 ---KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
KPNTIT+ LI G C + +A + + + IQ N V+ L++G+CK+G+ +
Sbjct: 309 KKNKPNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFS 368
Query: 175 ALRLL 179
A+
Sbjct: 369 AVEFF 373
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV FN + + + + +++ + A+ +M G PD + LI+
Sbjct: 369 AVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLIS 428
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G+M A V++++ + G+ + + LI G C +++R + +E+ G++
Sbjct: 429 GLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKP 488
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L++ L K G A ++++
Sbjct: 489 DIVTYNTLVSYLGKAGDFATATKVMK 514
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ F+ +L +P I + +++ L A + Q++ G D N+L
Sbjct: 402 DKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVL 461
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C ++ + +L ++ + G KP+ +T+ TL+ L A + +++ +G+
Sbjct: 462 ISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGL 521
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V+YG +I+ C A+++
Sbjct: 522 KPSVVTYGAVIHAYCLKKNIDEAMKIF 548
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILI 93
A + ++++ PS++ + ++ K+ A+ + +M + P+ V NILI
Sbjct: 509 ATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILI 568
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C + A S++ + +G +PNT T+ + KG+ + +A + D ++
Sbjct: 569 DALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRMLHKAFELMDRMVEDACN 628
Query: 154 LNQVSYGILINGLCKVGQ 171
+ V+ IL L +G+
Sbjct: 629 PDYVTMEILTEWLSAIGE 646
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ V L +L + P + ++++ L + +A L H + G + + N L
Sbjct: 149 EEIVGLVTKLCEYGVFPDTFKLTQLISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNAL 208
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG- 151
+ + +LA++ + P+ ITF LI C + ++ AL D+L +G
Sbjct: 209 LTGLGRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGR 268
Query: 152 ------IQLNQVSYGILINGLCKVGQ 171
++ + V Y LINGLCKVG+
Sbjct: 269 EKKWIGVEPDVVLYNTLINGLCKVGR 294
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 36 VCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
VC +R++++ P+ + +N I+ + A+ + +M+ GIMP+ VT NILI
Sbjct: 651 VC--SRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGG 708
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C G + A VL ++L G P IT L+K + LQ H++L+ G++L
Sbjct: 709 LCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLT 768
Query: 156 QVSYGILINGLCKVGQTRAA 175
Y LI LC++G TR A
Sbjct: 769 LTVYNTLITVLCRLGMTRKA 788
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I+ + ++ K + S A+S+ +M + D+V N LI LG+ +V
Sbjct: 593 PDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYDPQ-NV 651
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++++ G PN +T+ T+I C+ ++ AL E+ + GI N V+Y ILI GLCK
Sbjct: 652 CSRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCK 711
Query: 169 VGQTRAALRLL 179
G + A +L
Sbjct: 712 TGDVQKAADVL 722
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+ L N+ V N + ++ P+++ + +++ K ++SLS QM GI
Sbjct: 289 AFQKDEDQLTNNDVVTQNEIRNLQ--PTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGI 346
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
M D+VT + ++ C G+++ A ++ + G PN +++ T+I L + +V A
Sbjct: 347 MSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFN 406
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++ +G+ + V+ +++GL KV +T+ A +
Sbjct: 407 LQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFE 444
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT----- 88
+A F + +M P+ + + I+ L K+ A +L QM RG+ DIVT
Sbjct: 368 EAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIM 427
Query: 89 ---------------------LNILINC---------YCHLGQMSVAFSVLAKILKRGYK 118
LN+ NC YC LG+M +A VL K+ K
Sbjct: 428 DGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVP 487
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
PN ITF+++I G + +A+ E++ + I N Y ILI+ + G+ A
Sbjct: 488 PNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVA 544
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F +L++ P+ + ++ +L K +A + +M+ + P+++T + +I
Sbjct: 438 EAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSSII 497
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N Y G +S A VL ++++R PNT + LI + A ++ E+ ++
Sbjct: 498 NGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEIKVHRLE 557
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ V + IL+N L +VG+ AA L++
Sbjct: 558 ESNVIFDILLNNLKRVGRMDAARPLVK 584
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + N +L M P+ I ++ + K + + +++ G+ + N LI
Sbjct: 718 AADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLIT 777
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C LG A VL +++KRG + +T+ LI+G C V++A + + ++ GI
Sbjct: 778 VLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISP 837
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N +Y L+ GL G + +++R
Sbjct: 838 NITTYNTLLWGLSNAGLMKGTDKIVR 863
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F+R+ PS+ + +L+ + S + M F G++PD+ ++N+L++ C
Sbjct: 78 FSRMRAFDFVPSLHFWKNLLSEFNASGLVSQVKVMYSDMVFCGVVPDVFSVNVLVHSLCK 137
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+G + +A L+ + +T+ T+I G C V + E++ +G+ ++ ++
Sbjct: 138 VGDLDLALGY----LRNNDVIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSIT 193
Query: 159 YGILINGLCKVGQTRAA 175
IL+ G C++G R A
Sbjct: 194 CNILVKGYCRIGFVRYA 210
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 24 LHSHSRSLPNDAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+ ++SR D + + N+L+ M ++ +N ++T L + A + +M RGI
Sbjct: 741 VKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGI 800
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
D VT N LI YC + AF ++ G PN T+ TL+ GL +K +
Sbjct: 801 SADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLWGLSNAGLMKGTDK 860
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +G N +Y IL++G +VG + + R
Sbjct: 861 IVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYR 898
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + L +M RG+ D +T NIL+ YC +G + A V+
Sbjct: 157 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVMYN 216
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G + I TLI G C + +A+ ++ ++++ V+Y L+ CK+G
Sbjct: 217 LVDGGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGD 276
Query: 172 TRAALRLL 179
+ A L
Sbjct: 277 LKRAESLF 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + + +++ + + +N ++ H A QM GI P+I T N L+
Sbjct: 788 AKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLW 847
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G M ++ + +RG+ PN T+ L+ G + + +F+ E+L +G
Sbjct: 848 GLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREMLTKGFVP 907
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+Y +LIN K G+ A L
Sbjct: 908 TTGTYNVLINCFAKAGRMHKAGELF 932
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 43 LQMRHTP-SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+Q H P ++I F+ I+ K S A+ + +M R IMP+ ILI+ + G+
Sbjct: 481 MQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGK 540
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
VA +I + + + F L+ L ++ A ++ ++GI + V+Y
Sbjct: 541 QDVANGYYKEIKVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTS 600
Query: 162 LINGLCKVGQTRAALRLLR 180
LI+G K G AAL +++
Sbjct: 601 LIDGYFKEGNESAALSIVQ 619
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ D++ LN LI+ YC G MS A ++ K + + + +T+ TL+K C +KRA
Sbjct: 221 GVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRA 280
Query: 141 LQFHDELLA-------------------QGIQLNQVSYGILINGLCKVGQTRAALRL 178
+E+ A + +Q V+Y LI+ CK +L L
Sbjct: 281 ESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSL 337
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
T +I N ++ + S A+ L + + D+VT N L+ +C +G + A S
Sbjct: 223 TKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAES 282
Query: 108 VLAKILK-------------------RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ +I R +P +T+TTLI C V+ +L ++++
Sbjct: 283 LFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMI 342
Query: 149 AQGIQLNQVSYGILINGLCKVGQ-TRAAL 176
GI + V+ ++ LC+ G+ T AA+
Sbjct: 343 MNGIMSDVVTCSSILYALCRHGKLTEAAV 371
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 68/125 (54%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN ++ L + A + +M+ GI+PD+ + +ILI+ +C G++ A V ++
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 313
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G PN +++ LI G C +V +AL+ +E+ GI + SY ILI+G C+ G
Sbjct: 314 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 373
Query: 174 AALRL 178
+A++
Sbjct: 374 SAIKF 378
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 73/149 (48%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
S+P A+ L +L+ P ++ ++ +++ K + A+ L +M GI ++ T
Sbjct: 475 SVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY 534
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
ILIN + +M VA+ + + + P+ I +T+L+ G C ++ RA DE+
Sbjct: 535 TILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR 594
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRL 178
+G N V+Y IN K+ + A +L
Sbjct: 595 EGCSPNVVTYTCFINEYLKLNKNNQAHKL 623
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + R P I + ++ T + A +L +M G P++VT IN Y
Sbjct: 553 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 612
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQ 156
L + + A + K+ +RG P+ I +T LI C ++ RA DE+ +G N
Sbjct: 613 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNV 672
Query: 157 VSYGILINGLCKVGQTRAALRL 178
V Y LIN K+ + A +L
Sbjct: 673 VMYTCLINSYIKLNKRDQAEKL 694
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + ++ ++ + A + +M GI+P+I + +ILI+ +C G++ A V
Sbjct: 284 PDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEV 343
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ G P+ +++ LI G C + A++F +E+ + + +Y LI G K
Sbjct: 344 FEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYK 403
Query: 169 VGQTRAALRLLR 180
Q AL+ R
Sbjct: 404 SKQFANALKEFR 415
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 60/132 (45%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+++ + + L K + +A L + + + N +I C G + A
Sbjct: 213 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 272
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V ++ G P+ +++ LI G C +V +A + E+ GI N SY ILI+G C
Sbjct: 273 VFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFC 332
Query: 168 KVGQTRAALRLL 179
K G+ AL +
Sbjct: 333 KEGRVDKALEVF 344
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 70/141 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV LF ++ ++ T ++ + ++ + +A L M+ + PD + L+
Sbjct: 515 AVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVA 574
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C+ G+M+ A ++ ++ + G PN +T+T I ++ +A + ++++ +G+
Sbjct: 575 GFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYP 634
Query: 155 NQVSYGILINGLCKVGQTRAA 175
+Q+ Y +LI C G+ A
Sbjct: 635 DQILYTMLIAAFCNTGEMNRA 655
Score = 53.1 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 45/198 (22%)
Query: 27 HSRSLPNDAVCLFNRLLQ-------MRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+S S+ D C R+ Q MR++ P+I ++ ++ K A+ + +
Sbjct: 287 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 346
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG------ 130
M+ GI+PD+ + +ILI+ +C G M A ++ + P+ + +LIKG
Sbjct: 347 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 406
Query: 131 -----------------------------LCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
C +AL ++ G+ N SY
Sbjct: 407 FANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 466
Query: 162 LINGLCKVGQTRAALRLL 179
I+ +C+ AL+LL
Sbjct: 467 FIHRICRGSVPEKALQLL 484
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ + + +P+++ + + +K + A L +M+ RG+ PD + +LI
Sbjct: 585 ARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIA 644
Query: 95 CYCHLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+C+ G+M+ A ++ ++ + G PN + +T LI ++ +A + ++E+ A+G+
Sbjct: 645 AFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 703
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM----EFRGIMPDIVTLNILI 93
LF L++ P+I + ++ + S+ I + ++ G P++VT I
Sbjct: 164 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYI 223
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C +G VA+ ++ + ++ N F +I GLC + A + E+ GI
Sbjct: 224 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGIL 283
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY ILI+G C+ G+ A + +
Sbjct: 284 PDVYSYSILIDGFCRKGRVDQASEVFK 310
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI----KGLCLNDQ 136
GI +I++ N L+ C ++ + ++K G +PN T+T ++ +G+ +
Sbjct: 137 GIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVD 196
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++RA + ++ G N V+YG I GLCKVG A RL++
Sbjct: 197 IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQ 240
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 65/147 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ + + +PS + ++ K+K ++ A+ M+ G+ PD + N +
Sbjct: 373 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 432
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC + A ++ K + G N ++ I +C ++ALQ +L + +
Sbjct: 433 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 492
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+ K + A+ L
Sbjct: 493 LPDVVNYSTLISCFAKRLNSEKAVMLF 519
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 73/130 (56%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I +FN +L LV + ++ ++ ++PD T +I+I C+C ++ A VL
Sbjct: 110 TISDFNHLLMALVIAQKPDFCQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRVL 169
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+L+ G++P++ T T LI LC +VK+A++ + L +G++L +Y L+ GL V
Sbjct: 170 FTVLENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYV 229
Query: 170 GQTRAALRLL 179
G+ A+ +L
Sbjct: 230 GRVDEAVEIL 239
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ ++ ++ L K A+ L + G+ PD+VT N LI Y G+ VL
Sbjct: 251 VYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLK 310
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ + G + I + T++ GL ++ A + E++ G +++ G L+ LCK+
Sbjct: 311 MMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKL 369
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 63/110 (57%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+SL +M+ G P+ V N+LI+ C G +S A ++ + +G PN +T+ +L+
Sbjct: 229 AVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVH 288
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
GLCL ++ +A+ + ++A N +++G L++G K G+ +R+L
Sbjct: 289 GLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVL 338
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIE-FNKILTPLVKTKHYSIAISLSHQM----EFRGIMPD 85
LP A+ LF+R+ H ++ FN +L +++ + +A+ + + F I P+
Sbjct: 115 LPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPN 174
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
++ N++I C +G + A V + R + T++TL+ GLC ++ A+ D
Sbjct: 175 GLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLD 234
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ +G N V++ +LI+ LCK G A +L+
Sbjct: 235 EMQVEGTFPNPVAFNVLISALCKKGDLSRASKLV 268
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L + + P+ + FN +++ L K S A L M +G +P+ VT N L
Sbjct: 227 DEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSL 286
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A S+L +++ PN ITF TL+ G + + ++ L +G
Sbjct: 287 VHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGY 346
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N+ SY LI+GL K G+ ++L +
Sbjct: 347 RGNEFSYSSLISGLFKEGKGEHGMQLWK 374
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + FN ++ L + + A+ + M R + D T + L++ C+ G++ A S+
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G PN + F LI LC + RA + D + +G N+V+Y L++GLC
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 169 VGQTRAALRLL 179
G+ A+ LL
Sbjct: 293 KGKLDKAMSLL 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
H R+L D V + L + + + ++ +++ L K + L +M +G P+
Sbjct: 328 HGRAL--DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT 385
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
+ + LI+ C G+ A L ++ +G+ PN+ T+++L+ G + +A+ E
Sbjct: 386 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 445
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ ++V Y ILINGLCK G+ + AL
Sbjct: 446 MTDNDCNHHEVCYSILINGLCKNGKLKEAL 475
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P++A + HTP+ ++ ++ + AI + +M V +I
Sbjct: 401 PDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSI 460
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LIN C G++ A V ++L RG K + + ++++I G C V++ ++ +++L
Sbjct: 461 LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHN 520
Query: 152 --IQLNQVSYGILINGLCKVGQTRAALRLL 179
+Q + V+Y IL+N C A+ +L
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDIL 550
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ +K+ + A SL +M + + PD+VT N+LI ++G + +A +
Sbjct: 427 PNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQL 486
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++RG +P+ IT T I+G C+ ++ A + + +L G+ + V IL N CK
Sbjct: 487 CDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNKYCK 546
Query: 169 VGQ 171
+G+
Sbjct: 547 LGE 549
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%)
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
+ A L +M +G++PD+ T N ++N C G+M A ++ ++LK G PN IT+ TL
Sbjct: 128 AAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTL 187
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
IKG ++A + GIQ N+V+ I++ LC+ G A +L
Sbjct: 188 IKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNML 239
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ ++ K + A+ L ++M + D+V N+LIN C QM +A+
Sbjct: 251 TPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYG 310
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++LK+G P+ T+ LI LC ++ A + I +Q+SY ++I+GLC
Sbjct: 311 YACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLC 370
Query: 168 KVGQTRAALRLL 179
G A LL
Sbjct: 371 LNGDVLRAKDLL 382
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L+N ++Q ++ +N ++ + + + +A + +M +G++PD+ T NIL
Sbjct: 271 NQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNIL 330
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
I+ C G++S A + + K P+ I++ +I GLCLN V RA
Sbjct: 331 IHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRA 378
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L ++L+ P+ I +N ++ + A L M GI P+ VT NI++
Sbjct: 164 NADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIV 223
Query: 94 NCYCHLGQMSVAFSVLAKILKRG---YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
C G + A ++L KIL P+ + TTL+ N + +AL +E++ +
Sbjct: 224 RALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQK 283
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
+++ V+Y +LING+C+ Q A
Sbjct: 284 CTKVDVVAYNVLINGVCRNQQMHLA 308
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++K++ L A SL +M+ GI+P + T ILI+ +C G + A
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L +G PN +T+T LI Q+ A + + +L +G + N V+Y LI+G CK
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577
Query: 169 VGQTRAALRL 178
GQ A ++
Sbjct: 578 AGQIEKACQI 587
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++I + ++ L K A L M G P+ + + +I+ +C +G++ A V
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ +RGY PN T+++ I L ++++ L+ ++L N V Y +++GLCK
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 169 VGQTRAALRLL 179
+G+T A +L+
Sbjct: 734 IGKTDEAYKLM 744
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F ++ + ++P++ ++ + L K + + + +M P++V ++
Sbjct: 669 DAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMV 728
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C +G+ A+ ++ K+ ++G PN +T+T +I G + ++++ L+ ++ ++G
Sbjct: 729 DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCA 788
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y +LIN C G A +LL
Sbjct: 789 PNFITYRVLINHCCSNGLLDEAYKLL 814
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF + + PS+ + ++ K A +M +G P++VT LI+
Sbjct: 479 AFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIH 538
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL------- 147
Y QM VA + +L G KPN +T+T LI G C Q+++A Q + +
Sbjct: 539 AYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESS 598
Query: 148 -LAQGIQL--------NQVSYGILINGLCKVGQTRAALRLL 179
+ + +L N ++YG L++GLCK + + A LL
Sbjct: 599 DMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELL 639
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D +C NR+ + P+ I ++ ++ K A + +M RG
Sbjct: 624 DGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYS 683
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++ T + I+C ++ + VL+K+L+ PN + +T ++ GLC + A +
Sbjct: 684 PNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKL 743
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +G N V+Y +I+G K G+ L L R
Sbjct: 744 MLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR 780
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G++ + V ++ C C G+ AF ++ +++ +G+ P+ T++ +I LC +V++A
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKA 479
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+E+ GI + +Y ILI+ CK G + A +
Sbjct: 480 FSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARK 516
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L + A + +M +G +PD T + +I C ++ AFS+ ++ + G P+
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+T LI C +++A ++ DE+L +G N V+Y LI+ K Q A L
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 55/110 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ +++L+ TP+++ + +++ L K A L +ME +G P++VT +I+ +
Sbjct: 708 VLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFG 767
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
G++ + + +G PN IT+ LI C N + A + DE+
Sbjct: 768 KSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N++++ L + + A+ + H+M +P++VT IL++ GQ+ +
Sbjct: 277 PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRI 336
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L+ ++ G PN F +LI C + A + +++ G Q + Y I I +C
Sbjct: 337 LSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVC 395
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL +A+ + +R+ P+++ + +L+ ++ + M G P+
Sbjct: 293 SLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIF 352
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ---------VKRA 140
N LI+ YC S A+ + K++K G +P + + I +C N++ V++A
Sbjct: 353 NSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKA 412
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ E+L G+ LN+V+ LC G+ A +++
Sbjct: 413 ---YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKII 448
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT--LNILINCYCH 98
R + HTP + F+K+L L + + L ME + +++ LN L+ C
Sbjct: 131 RQIGYSHTPQV--FDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCR 188
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G ++A L ++ GYKP+ T+ LI+ D++ A E+L+ +++ +
Sbjct: 189 NGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYT 248
Query: 159 YGILINGLCKVGQTRAALRLL 179
LCK G+ R A L+
Sbjct: 249 LSCFAYSLCKGGKCREAFDLI 269
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ +K+ + A SL +M + + PD+VT N+LI ++G + +A +
Sbjct: 446 PNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQL 505
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++RG +P+ IT T I+G C+ ++ A + + +L G+ + V IL N CK
Sbjct: 506 CDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNKYCK 565
Query: 169 VGQ 171
+G+
Sbjct: 566 LGE 568
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M +G++PD+ T N ++N C G+M A ++ ++LK G PN IT+ TLIKG
Sbjct: 155 KMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVH 214
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++A + GIQ N+V+ I++ LC+ G A +L
Sbjct: 215 NTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNML 258
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ ++ K + A+ L ++M + D+V N+LIN C QM +A+
Sbjct: 270 TPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYG 329
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++LK+G P+ T+ LI LC ++ A + I +Q+SY ++I+GLC
Sbjct: 330 YACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLC 389
Query: 168 KVGQTRAALRLL 179
G A LL
Sbjct: 390 LNGDVLRAKDLL 401
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L+N ++Q ++ +N ++ + + + +A + +M +G++PD+ T NIL
Sbjct: 290 NQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNIL 349
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
I+ C G++S A + + K P+ I++ +I GLCLN V RA
Sbjct: 350 IHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRA 397
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L ++L+ P+ I +N ++ + A L M GI P+ VT NI++
Sbjct: 183 NADFLVRQMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIV 242
Query: 94 NCYCHLGQMSVAFSVLAKILKRG---YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
C G + A ++L KIL P+ + TTL+ N + +AL +E++ +
Sbjct: 243 RALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQK 302
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
+++ V+Y +LING+C+ Q A
Sbjct: 303 CTKVDVVAYNVLINGVCRNQQMHLA 327
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+LH +++ + ++AV L N + R TP + ++ L + S L +M RG
Sbjct: 87 NLHMYNK-MVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQ 145
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+++T N L++ C Q I +G +PN T+T L+ G+C N ++K A
Sbjct: 146 PANVITYNSLLDALCKNHQ----------IKDQGIQPNLYTYTLLVDGICKNGKLKDAKA 195
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +LL +G L+ + Y +++N LCK G AL +L
Sbjct: 196 VYQDLLIKGYHLDVIMYNVMVNWLCKEGLFDEALSIL 232
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L + + + ++I +N +L L K +HQ++ +GI P++ T +L
Sbjct: 131 SDVWDLIDEMHERGQPANVITYNSLLDALCK----------NHQIKDQGIQPNLYTYTLL 180
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A +V +L +GY + I + ++ LC AL ++
Sbjct: 181 VDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNC 240
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y I+I L K + A++LL
Sbjct: 241 TPDVVTYEIVIRALFKNVKNDKAVKLL 267
>Medtr3g030390.1 | PPR superfamily protein | HC |
chr3:9629253-9628365 | 20130731
Length = 209
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY- 96
L RL + TP I EF IL LV +YS AIS Q+EF GI P IVTL+IL+N Y
Sbjct: 18 LIPRLFILSPTPLIFEFINILGFLVNINNYSTAISSFCQLEFNGITPSIVTLSILMNSYY 77
Query: 97 -----------CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC----LNDQV---- 137
C +G+ A +L KI + + + T+I LC +ND
Sbjct: 78 QVSYAILLNELCKMGETRAAMQMLRKIW---VNTDLVMYRTIIDSLCKDKLVNDDYELYP 134
Query: 138 ----KRALQFHDELLAQGIQLNQVSYG----------ILINGLCKVGQTRAALRLL 179
K+A+ ++ +G+ N V+YG +LINGLC+ + A+ L
Sbjct: 135 AMIRKQAISVLAMMMKKGVHPNVVTYGWCQMFDATISLLINGLCEKKRVDEAMNLF 190
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N++ + + +P+++ +N ++ L K + A L H M G +PD T I+
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C +G++ A V + ++ + N +T LI G C ++ A +L +G
Sbjct: 479 CLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N +++ +L++GL K G+ A+ L+
Sbjct: 539 NSITFNVLLDGLRKEGKVEDAMSLV 563
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + N L + S+ +N++ L + L M G+ P++++ N ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C +G + VA + ++K G+ ++ T+T+LI G C ++ A + + + +G
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N+VSY LI+G C+VG+ AL L
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELF 283
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F + Q + + + ++ + A+ L QM+ G PD+ T +L+
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLV 302
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C +G+ + A ++++ G +PN T+T LI C ++ ++ +L +G+
Sbjct: 303 AAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLV 362
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V + LI+G CK G A+ +L
Sbjct: 363 SSVVPFNALIDGYCKRGMMEDAICVL 388
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++ + + + +L+ S++ FN ++ K AI + M+ + P+ T N L
Sbjct: 347 DEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNEL 406
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C M A ++L K+ + PN +T+ TLI GLC V A + H ++ G
Sbjct: 407 ICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGF 466
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+Q ++ I+ LCK+G+ A
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQA 489
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 19 MPFSSLHSH--SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+PF++L R + DA+C+ + + + P+ +N+++ + K A++L ++
Sbjct: 366 VPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNK 425
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M + P++VT N LI+ C + A+ + ++K G+ P+ TF I LC +
Sbjct: 426 MYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGK 485
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
V++A Q + L + + N+ Y LI+G CK + A L +
Sbjct: 486 VEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ F +++ P++ + ++ K + + M +G++ +V N LI
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G M A VL + PN+ T+ LI G C + RA+ +++ +
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
N V+Y LI+GLCK +A RL
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRL 457
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ + P + + ++ + + A+ +M GI P++ T +L
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C +G+M +L+ +L++G + + F LI G C ++ A+ D + +
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N +Y LI G C+ A+ LL
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALL 423
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L ++ CLF +L P++I FN ++ K + +A + + G D T
Sbjct: 169 GLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTY 228
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
LI YC + ++ A+ V + + G N +++T LI G C ++ AL+ ++
Sbjct: 229 TSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKE 288
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + +Y +L+ C+VG+ AL+
Sbjct: 289 DGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA LF R+L P+ I FN +L L K A+SL M P + T IL
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I A L +++ G +PN +T+T IK C ++ A + ++ +GI
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI 641
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y +L+N +GQ +A +L
Sbjct: 642 LLDSFIYDVLVNAYGCIGQLDSAFGVL 668
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F L + + + ++ K + +S A L +M F G P+ +T N+L++
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLR 551
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A S++ + K KP T+T LI+ + RA F D++++ G Q N V
Sbjct: 552 KEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVV 611
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y I C+ G+ A ++
Sbjct: 612 TYTAFIKAYCRQGRLLEAEEMV 633
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 71/141 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++++ P++ ++K++ L K +H S+A L + M+ GI P N L++ C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
LG A +L +++ + + ++ L+ GL ++A + LL+ G ++V
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847
Query: 158 SYGILINGLCKVGQTRAALRL 178
+ +L++GL + G +L
Sbjct: 848 VWKVLLDGLVRKGYVDECSQL 868
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + + + A + +++ GI+ D ++L+N Y +GQ+ AF V
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGV 667
Query: 109 LAKILKRGYKPNTITFTTLIK------------GLCLND--------QVKRALQFH---- 144
L ++ G +P+ T++ L+K GL LN + + F
Sbjct: 668 LIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727
Query: 145 --DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++++ QG N +Y LI GLCKV A RL
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF 764
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ ++ P + +N ++ + K + L M GI PD++T +I C
Sbjct: 127 VLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLC 186
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL-NQ 156
G++ A+ ++ + G PN++ + ++ GLC D ++RAL+ DE+ G N
Sbjct: 187 SAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNV 246
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
V+Y LI CK G+ AL +L
Sbjct: 247 VTYTSLIQSFCKRGEWTEALNIL 269
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
F ++L + ++ + + + +ME + PD V N++I C G + + ++ +
Sbjct: 108 FREVLKLCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMS 167
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P+ IT+ T+I+GLC +++ A + + G N V +++GLC++
Sbjct: 168 LNGICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSME 227
Query: 174 AALRLL 179
AL LL
Sbjct: 228 RALELL 233
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIVTLNILINCYCHLGQMSVAF 106
+P+ + + +L L + A+ L +ME G P++VT LI +C G+ + A
Sbjct: 207 SPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEAL 266
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
++L ++ G N +T TLI+ LC +V A + D+L+ + Y L+
Sbjct: 267 NILDRMRAFGCFANHVTVFTLIESLCTEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISF 326
Query: 167 CKVGQTRAALRLLR 180
+V + A L +
Sbjct: 327 IRVKKLEGAENLFK 340
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ +L+ ++ +N +L L K H A+ + M + + PD T +I I YC
Sbjct: 235 LFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYC 294
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ AF VL K+ + PN T+ +IK LC +V+ A Q DE+++ G++ +
Sbjct: 295 DANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTW 354
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY + C + AL+L+
Sbjct: 355 SYNAIQAYHCDHCEVNRALKLI 376
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 26 SHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
++SR+ LP+ A+ F R+ + PSII+ + +L L K KH A Q++ ++
Sbjct: 153 AYSRADLPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLT 212
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
T +ILIN + +G A + +L++G + + + L++ LC V A+ F
Sbjct: 213 -TKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFL 271
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++L++ ++ + +Y I I C +A +L
Sbjct: 272 NDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVL 306
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A+ LFNR++ P ++ +N ++ L K K + A + + M GI PD T +
Sbjct: 448 DEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTV 507
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++ C Q+ A S ++ + + ++KGLC + + A F EL+ G
Sbjct: 508 IVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSG 567
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
I N SY ILIN C +G R +++R
Sbjct: 568 ISPNIYSYNILINCACNLGLKREVYQIVR 596
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMR--HTPSIIEFNKILTPLVKTKHY 67
HR LLA S P L L+Q++ PS++ +N+++
Sbjct: 73 HRTCNLLLAKLLRS------KTPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRP 126
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
A L M+ RG P++V+ LIN YC +G + A V ++L+ G +PN++T++ L
Sbjct: 127 FDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVL 186
Query: 128 IKGLCLNDQVKRALQFHDEL-----LAQGIQLNQVSYGILINGLCKVG 170
I+G + + +L + + +N ++ LI+ LCK G
Sbjct: 187 IRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEG 234
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQF 143
D++TLN +IN +C +G+ A VL +L + P+ +TFTTLI GL ++V AL
Sbjct: 394 DVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDL 453
Query: 144 HDELLAQ-GIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ + G++ V+Y +LI L K+ + A +
Sbjct: 454 FNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVF 490
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ F ++ L K ++ ++ M +P+ V +I+ +C +G+ A ++
Sbjct: 219 NVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIV 278
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ KR + P+ +++ +I GL + R Q +E G L + +Y +L+ LC+V
Sbjct: 279 YLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRV 338
Query: 170 GQTRAALRLLR 180
A +L+
Sbjct: 339 LDVDKAREVLK 349
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ IL L + ++ A +++ GI P+I + NILINC C+LG + ++ ++
Sbjct: 540 YAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMN 599
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA-QGIQLNQ 156
K G P+ +T+ L K L +V + F D L+ +G+ ++
Sbjct: 600 KNGVAPDCVTWRILHK---LQSKVTKHTPFEDPTLSTEGVDMDN 640
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 69/124 (55%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
++ ++ P+I+ +N ++ L K + L +M + PD+VTLN L+N C +G++
Sbjct: 229 VEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRV 288
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
A ++ +G + N +T+T LI G C + + +A+Q+ DE+L+ G + + Y L
Sbjct: 289 DSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSL 348
Query: 163 INGL 166
I+ L
Sbjct: 349 ISSL 352
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P+IVT N LI+ C G + + +++ + +P+ +T L+ G+C +V A++F
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEF 294
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+E+ +G++ N V+Y LI+G C V A++
Sbjct: 295 FNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQ 328
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ +L+ K K + ++ME + PD VT N L++ G + A ++ +++
Sbjct: 375 YYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMI 434
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQVSYGILINGLCKVGQT 172
+ G++P+ + +I CL V A++ +E+ + ++ N V Y ILI+ LCK
Sbjct: 435 EEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNV 494
Query: 173 RAALRLL 179
A+ L+
Sbjct: 495 EKAVSLM 501
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N++ ++ P + +N +++ L K + A + +M G P + +I+ YC
Sbjct: 394 MLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAIIHAYC 453
Query: 98 HLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
+ A + ++ +PN + +T LI LC + V++A+ ++ + ++ N
Sbjct: 454 LKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSVRPNT 513
Query: 157 VSYGILINGL 166
Y +++ GL
Sbjct: 514 TIYNVILKGL 523
Score = 52.8 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 19 MPFSSLHSHSRSLPN-------DAVCLFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSI- 69
+ F S HS +SL N +++ LFNR L ++ T S +N +L +K
Sbjct: 37 LKFISSHSQRQSLTNAPPPMSDESLILFNRFLPSLKSTES---YNSVLARSSSSKRGFTD 93
Query: 70 --AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
+ L ++ G+ PD+ L I+ C+ + VA+ +L + K G + L
Sbjct: 94 DDIVGLVTKLGEHGVFPDMFQLMDFISVLCYKRKNCVAWELLRAVKKLGGTVEATSCNVL 153
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
++GL + ++ + E+ I+ N +++ ILI+ LCK +T AL
Sbjct: 154 LRGLGSQNDIRSMYKLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEAL 202
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILI 93
A + +++ PS+ + I+ K+ A+ + +M + P+IV ILI
Sbjct: 426 ATKMMKEMIEEGFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILI 485
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C + A S++ + + +PNT + ++KGL + +A + D ++
Sbjct: 486 DALCKTNNVEKAVSLMGDMKLKSVRPNTTIYNVILKGLWDKRMLHKAFELMDRMVEDACS 545
Query: 154 LNQVSYGILINGLCKVGQ 171
+ V+ IL L VG+
Sbjct: 546 PDHVTMEILTEWLSAVGE 563
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
+Q + + +N I+ K + A L +M +GI PD+VT +LI + G
Sbjct: 316 MQSKGVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGS 375
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
+VA +L ++ P+ I +TT++ C + + +A +++ G+ + VSY +
Sbjct: 376 NVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAI 435
Query: 163 INGLCKVGQTRAALRL 178
ING CK + A RL
Sbjct: 436 INGFCKASRVMGAWRL 451
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P I FN L L + A+ L M +G PD+V+ I+I+ C + +
Sbjct: 112 VPDIWAFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKRFDEVVH 171
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V K++ G KP+ L+ GLC V A + +++ G+++N + Y LI+G
Sbjct: 172 VWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFY 231
Query: 168 KVGQTRAA 175
K+G+ A
Sbjct: 232 KMGKKDKA 239
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 72/141 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ + + P ++ F ++ ++ ++A L +M+ I+PD++ +++ C
Sbjct: 346 LYEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQC 405
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A+ V +++ G P+ +++ +I G C +V A + ++E+ +G+ ++V
Sbjct: 406 KSGNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVKGLDPDEV 465
Query: 158 SYGILINGLCKVGQTRAALRL 178
++ +++ L + + A R+
Sbjct: 466 TFNLIVGVLIQGNKISEAYRV 486
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 40 NRLL----QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
N+LL MR P +I + ++ K+ + A + M G+ PD+V+ N +IN
Sbjct: 379 NKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNAIING 438
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C ++ A+ + ++ +G P+ +TF ++ L +++ A + D+++ +G LN
Sbjct: 439 FCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEAYRVWDQMMEKGFTLN 498
Query: 156 QVSYGILINGL 166
IL+N +
Sbjct: 499 GDLSNILVNAV 509
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+++ +T L K++ + SL M+ GI+PDI NI +N C ++ A + +
Sbjct: 83 YSRFITALCSVKNFLLIESLLRDMDDLGIVPDIWAFNIYLNILCRENRLETALQLFQTMP 142
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+G KP+ +++T +I LC + + +L+ G++ + L+ GLC G
Sbjct: 143 LKGRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVD 202
Query: 174 AALRLL 179
A L+
Sbjct: 203 LAYELV 208
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P ++ +N +L A L ME G M D+ + N L+ +C Q+ A+
Sbjct: 252 APDLVTYNILLNYGCDEVTVDEAERLVETMERSG-MADLYSYNELLKAFCKAYQVDRAYL 310
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ ++ + +++ T+I C + +RA + ++E+ +GIQ + V++ +LI
Sbjct: 311 YMVNKMQSKGVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFL 370
Query: 168 KVGQTRAALRLL 179
+ G + A +LL
Sbjct: 371 RKGGSNVANKLL 382
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM--EFRGIMPDIV 87
S+ ++ F + P ++ +N ++ L + +A +L + M + + + PD+V
Sbjct: 240 SMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVV 299
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T LI YC ++ A +L ++ RG KPN +T+ TLIKGLC + + + +++
Sbjct: 300 TYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQM 359
Query: 148 LAQGIQL-NQVSYGILINGLCKVGQTRAALRLLR 180
G + + ++ LIN C G A ++
Sbjct: 360 KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFE 393
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIVTLNILINCYCHLGQMSVAFS 107
P+I+ +N ++ L + + + + QM+ G +PD T N LIN +C G + AF
Sbjct: 331 PNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFK 390
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ-------VSYG 160
V + K ++ +++ LI+ LC +A DEL + I L+ SY
Sbjct: 391 VFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYK 450
Query: 161 ILINGLCKVGQTRAALRLLR 180
+ LC+ G+T+ A R+LR
Sbjct: 451 CMFQYLCENGKTKKAERVLR 470
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN ++ + + ++ L M+ G+ P +VT N ++ G+ ++A V ++L
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 114 KR-GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
K G KP+T T+ LI+G C N V F E+ + + V+Y L++GLC+ G+
Sbjct: 218 KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKI 277
Query: 173 RAALRLL 179
+ A L+
Sbjct: 278 KVAHNLV 284
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNIL 92
++V LF + + +P ++ FN +L L+K ++A + +M + G+ PD T NIL
Sbjct: 173 ESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNIL 232
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C + F ++ P+ +T+ TL+ GLC ++K A + + +
Sbjct: 233 IRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCK 292
Query: 153 QL--NQVSYGILINGLCKVGQTRAALRLLR 180
L + V+Y LI G C+ + AL +L
Sbjct: 293 DLSPDVVTYTTLIRGYCRKQEVDEALDILE 322
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++N +L+ P+ +N +L + + A+ M+ RGI PD+VT N LI+ +
Sbjct: 226 VYNAMLREGIEPTRHTYNILLWGMFLSLKLDTAVRFYDDMKSRGIEPDVVTYNTLIHGFF 285
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A S+ ++ + PN I++TT++KG +V RA + +E+ GI+ N V
Sbjct: 286 RFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAV 345
Query: 158 SYGILINGLCKVGQTRAALRLL 179
++ L+ GLC + A +L
Sbjct: 346 TFTTLLPGLCDADKMVEAGNVL 367
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV ++ + P ++ +N ++ + K A SL +M+ + +MP++++ +
Sbjct: 256 DTAVRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTM 315
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + +G++ AF V ++ G KPN +TFTTL+ GLC D++ A E++ + I
Sbjct: 316 LKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYI 375
Query: 153 QLNQVS-YGILINGLCKVGQTRAALRLL 179
S + L+ CK G AA+ +L
Sbjct: 376 APKDNSVFMKLMECQCKGGNLDAAVDVL 403
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L K++ S A+ L +M RG PDI+T N +++ C A ++L K+ +G
Sbjct: 113 LIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQG 172
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+PN T+T L+KGLC + +++ A + ++L G L+ +Y ++I G C G L
Sbjct: 173 IRPNMNTYTILVKGLCRSGKLEDARKVFEDL---GYNLDVYAYTVMIQGFCDKGLFDEVL 229
Query: 177 RLL 179
LL
Sbjct: 230 ALL 232
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
++ R +P+++ ++ +++ AI ++M F I P++ T IL++ +C G+
Sbjct: 1 MVSRRTSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGR 60
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---------------------- 139
+ A +VLA ++K+G KP+ +T+ +L+ G C+ +V +
Sbjct: 61 VKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKS 120
Query: 140 -----ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
AL+ DE+ +G Q + ++Y +++ LCK A+ LL
Sbjct: 121 RRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALL 165
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ FN+++ P++ F ++ K A ++ M +GI PD+VT N L+
Sbjct: 28 DAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYNSLM 87
Query: 94 NCYCHLGQ---------------------------MSVAFSVLAKILKRGYKPNTITFTT 126
+ YC + + +S A ++ ++ RG +P+ IT+ +
Sbjct: 88 DGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNS 147
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ LC +A+ +L QGI+ N +Y IL+ GLC+ G+ A ++
Sbjct: 148 ILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRSGKLEDARKVFE 201
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P II +N IL L K H AI+L +++ +GI P++ T IL+
Sbjct: 126 ALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVK 185
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A V + GY + +T +I+G C L ++ G
Sbjct: 186 GLCRSGKLEDARKVFEDL---GYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIP 242
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y I+I L + + A +LLR
Sbjct: 243 DAKTYEIIILSLFEKDENDMAEKLLR 268
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P ++ K++ L + A + ++E G D V N LI
Sbjct: 262 ALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIK 321
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C +G++ V L ++ +GY PN T+ LI G C + + AL +++ GI
Sbjct: 322 GFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINR 381
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V++ +I GLC G+ +L
Sbjct: 382 NFVTFDTMIRGLCSEGRIEDGFSILE 407
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 35 AVCLFNR------LLQMRH----TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+CL NR LLQ+ TP+ + +N +L L + A SL ++M + P
Sbjct: 186 GLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDP 241
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+ VT NILI+ Y + A +L K P+ +T T +++ LC +V A +
Sbjct: 242 NEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVL 301
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + G L+ V+Y LI G C VG+ + L L+
Sbjct: 302 ERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLK 337
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI--AISLSHQMEFRGIMPDIVTLN 90
DA ++++++ PSI+ +N ++ ++H SI A+ L ++M P T N
Sbjct: 470 EDAKNIYDKMIDEGGIPSILVYNSLVHGF--SQHGSIREAVELINEMISNNCFPIASTFN 527
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I +C G++ A + I RG PNT T++ LI LC +++ALQ E++ +
Sbjct: 528 AIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEK 587
Query: 151 GIQLNQ 156
GI +Q
Sbjct: 588 GILPDQ 593
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 14 TFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL 73
T L A+ + +RSL N+ V P+ + FN +++ K ++ A+ L
Sbjct: 217 TLLHALCRNGKVGRARSLMNEMV-----------DPNEVTFNILISSYYKEENLVQALVL 265
Query: 74 SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
+ ++PD+VT+ ++ C+ G+++ A VL ++ G + + + TLIKG C
Sbjct: 266 LEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCG 325
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+VK L F ++ +G N +Y ILI G C+ AL L
Sbjct: 326 VGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLF 371
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TPS+ FN IL LVK M G+ D T IL+ C ++ F
Sbjct: 139 TPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFK 198
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L I G PNT+ + TL+ LC N +V RA +E+ + N+V++ ILI+
Sbjct: 199 LLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYY 254
Query: 168 KVGQTRAALRLLR 180
K AL LL
Sbjct: 255 KEENLVQALVLLE 267
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + R+ + + + +N ++ + + QME +G +P++ T NILI
Sbjct: 296 EAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILI 355
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD--ELLAQG 151
+C + +A + + G N +TF T+I+GLC +++ + E +G
Sbjct: 356 YGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEG 415
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + Y +I GL K + A L
Sbjct: 416 SKGHISPYNSIIYGLFKQNRFDEASEFL 443
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 55 NKILTPLVKTKHYSI--AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKI 112
++ +T + K K +I A ++ +M G +P I+ N L++ + G + A ++ ++
Sbjct: 455 DRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEM 514
Query: 113 LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
+ P TF +I C +++ AL+F +++ A+G N +Y LI+ LC+ G
Sbjct: 515 ISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDI 574
Query: 173 RAALRLL 179
+ AL++
Sbjct: 575 QKALQVF 581
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ ++ ++ L K A + +M+ G+ PD +T LIN + GQ+ A +
Sbjct: 342 PNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIEL 401
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + + +T+TF ++ GLC + AL ++L QG+ LN+ SY I++N L +
Sbjct: 402 LTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQ 461
Query: 169 VGQTRAALRLL 179
+ R A +LL
Sbjct: 462 NCELRKANKLL 472
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYK-PNTITFTTLIKGLCLNDQVKRALQ 142
P++ NIL+ +C G + AF V+ ++ Y PN IT++TL+ GLC N ++K A +
Sbjct: 235 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFE 294
Query: 143 FHDELLAQG-IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+E++++ I + ++Y +LING C+ G+ A ++
Sbjct: 295 LFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIE 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 34 DAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A LF ++ P + +N ++ + A ++ M+ G P++ + L
Sbjct: 291 EAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSAL 350
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A VLA++ G KP+ IT+T+LI N Q+ A++ E+
Sbjct: 351 VDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDC 410
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + V++ +++ GLC+ G+ AL ++
Sbjct: 411 QADTVTFNVILGGLCREGRFDEALDMIE 438
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 34 DAVCLFNRLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIVT 88
D F + +MR++ P++I ++ ++ L + A L +M + I+PD +T
Sbjct: 252 DIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLT 311
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N+LIN +C G+ A +V+ + G PN ++ L+ GLC +++ A E+
Sbjct: 312 YNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMK 371
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ G++ + ++Y LIN + GQ A+ LL
Sbjct: 372 SSGLKPDAITYTSLINFFSRNGQIDEAIELL 402
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 6 YRWFHRNPTFLLAMPFSS----LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTP 60
YR FH L+ F + LH R AV L N + + P+++ F ++
Sbjct: 331 YRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDG 390
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L ++ H + +M GI+PD+V ++I Y + A + K++ RG PN
Sbjct: 391 LSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPN 450
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+ ++I+G C+ + A E+ +G N V Y L+ L K G+ A ++LR
Sbjct: 451 VFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLR 510
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++++L + +N ++ + + L H+M G+ PD T NI+++
Sbjct: 298 VYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLG 357
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A +L + +RG +P + FTTLI GL + + DE++ GI + V
Sbjct: 358 RGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVV 417
Query: 158 SYGILING 165
+Y ++I G
Sbjct: 418 AYTVMITG 425
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 63/119 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D +F+ ++++ P ++ + ++T V + A + +M RG +P++ T N +
Sbjct: 398 DDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSM 457
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I +C G+ A S+L ++ +G PN + ++TL+ L ++ RA + +++ +G
Sbjct: 458 IRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 516
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 66/146 (45%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
S + V F + + P +N IL L+ Y + + QM F G + D
Sbjct: 251 SGEAGFARNLVVKFIKSRSFNYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSD 310
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+ T NI++ LG+++ + + ++ G P+ T+ ++ L ++ +A++ +
Sbjct: 311 VFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLN 370
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQ 171
+ +GI+ V + LI+GL + G
Sbjct: 371 HMRERGIEPTVVHFTTLIDGLSRSGH 396
>Medtr3g104020.1 | PPR superfamily protein | LC |
chr3:47925706-47924189 | 20130731
Length = 439
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-----IMPDIVTLNILIN 94
NR M I +FN + L + + L+ + E + ++PDI T IL
Sbjct: 73 NRFNSMLGYYPISDFNSLFYSLPDIHQHRTILKLAKKFESQPPDSHYVVPDIDTCLILFT 132
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ G S AF + +I++ ++P+T L + LC+ + + L G QL
Sbjct: 133 CHARSGNFSSAFFLFREIIETDHRPSTSILNDLFRSLCIRGHIYNYIT-----LKSGFQL 187
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y +L+NGLC++G+ + A+ L R
Sbjct: 188 NDITYYLLVNGLCRIGEAQRAIHLFR 213
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 27 HSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
H+RS + A LF +++ H PS N + L H I+L + I
Sbjct: 134 HARSGNFSSAFFLFREIIETDHRPSTSILNDLFRSLCIRGHIYNYITLKSGFQLNDI--- 190
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT----TLIKGLCLNDQVKRAL 141
T +L+N C +G+ A + ++ K NTI T ++I LC + V +A
Sbjct: 191 --TYYLLVNGLCRIGEAQRAIHLFRQV-KININCNTIALTDFYNSIILTLCKDRLVNQAY 247
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
F+ E++ + I ++Y LING C +G+ + A+ LLR
Sbjct: 248 DFYSEMIVKNIPRCCLTYHYLINGYCIIGEFKQAIALLR 286
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 6 YRWFHRNPTFLLAMPFSS----LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTP 60
YR FH L+ F + LH R AV L N + + P+++ F ++
Sbjct: 307 YRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTTLIDG 366
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L ++ H + +M GI+PD+V ++I Y + A + K++ RG PN
Sbjct: 367 LSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPN 426
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+ ++I+G C+ + A E+ +G N V Y L+ L K G+ A ++LR
Sbjct: 427 VFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLR 486
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++++L + +N ++ + + L H+M G+ PD T NI+++
Sbjct: 274 VYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLG 333
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A +L + +RG +P + FTTLI GL + + DE++ GI + V
Sbjct: 334 RGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVV 393
Query: 158 SYGILING 165
+Y ++I G
Sbjct: 394 AYTVMITG 401
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 63/119 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D +F+ ++++ P ++ + ++T V + A + +M RG +P++ T N +
Sbjct: 374 DDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSM 433
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I +C G+ A S+L ++ +G PN + ++TL+ L ++ RA + +++ +G
Sbjct: 434 IRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRARKVLRQMMEKG 492
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 66/146 (45%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
S + V F + + P +N IL L+ Y + + QM F G + D
Sbjct: 227 SGEAGFARNLVVKFIKSRSFNYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSD 286
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+ T NI++ LG+++ + + ++ G P+ T+ ++ L ++ +A++ +
Sbjct: 287 VFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLN 346
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQ 171
+ +GI+ V + LI+GL + G
Sbjct: 347 HMRERGIEPTVVHFTTLIDGLSRSGH 372
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+ +L+ + PS++ +N ++ L + A+ L M +G + VT +L+
Sbjct: 200 NACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLM 259
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C LG+ A ++ + RG KP + F+ L+ L ++ A+ E+ + ++
Sbjct: 260 EGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLK 319
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y + +N LCK G+T A ++L
Sbjct: 320 PDVVTYNVFVNYLCKEGKTAEAYKML 345
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA F R +M P+ + FN ++ +K + A + +M R + P +V+ N L
Sbjct: 167 NDA---FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G + A ++ + ++G + N +T+ L++GLC + + A + ++ +G
Sbjct: 224 IGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGC 283
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ +L+N L K G+ A+ L R
Sbjct: 284 KPQLVNFSVLMNDLGKRGKIDEAMVLFR 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L Y A L M +RG P +V ++L+N G++ A + ++ KR
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
KP+ +T+ + LC + A + E+ G + N +Y +L++GLC+ G + L
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 177 RLL 179
+L
Sbjct: 378 SVL 380
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F+ ++ L K A+ L +M R + PD+VT N+ +N C G+ + A+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G +PN T+ L+ GLC N + L + + A ++ L+ GL K
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLK 404
Query: 169 VGQTRAALRLLR 180
G +L
Sbjct: 405 SGNIDGGYFVLE 416
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N L+N G A + + G++PNT+TF ++KG + + A + DE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L + +Q + VSY LI L + G A+RL+
Sbjct: 209 LERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVE 241
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 63/148 (42%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A+ LF + + R P ++ +N + L K + A + +M+ G P+ T
Sbjct: 300 RGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAAT 359
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+L++ C G SVL + + P + TF L+ GL + + +E++
Sbjct: 360 YRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + + S+ +I C ++
Sbjct: 420 KRKVDFDLESWEAVIKYACSEDDKSGSM 447
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+ +L+ + PS++ +N ++ L + A+ L M +G + VT +L+
Sbjct: 200 NACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLM 259
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C LG+ A ++ + RG KP + F+ L+ L ++ A+ E+ + ++
Sbjct: 260 EGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLK 319
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y + +N LCK G+T A ++L
Sbjct: 320 PDVVTYNVFVNYLCKEGKTAEAYKML 345
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA F R +M P+ + FN ++ +K + A + +M R + P +V+ N L
Sbjct: 167 NDA---FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G + A ++ + ++G + N +T+ L++GLC + + A + ++ +G
Sbjct: 224 IGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGC 283
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ +L+N L K G+ A+ L R
Sbjct: 284 KPQLVNFSVLMNDLGKRGKIDEAMVLFR 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L Y A L M +RG P +V ++L+N G++ A + ++ KR
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
KP+ +T+ + LC + A + E+ G + N +Y +L++GLC+ G + L
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 177 RLL 179
+L
Sbjct: 378 SVL 380
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F+ ++ L K A+ L +M R + PD+VT N+ +N C G+ + A+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G +PN T+ L+ GLC N + L + + A ++ L+ GL K
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLK 404
Query: 169 VGQTRAALRLLR 180
G +L
Sbjct: 405 SGNIDGGYFVLE 416
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N L+N G A + + G++PNT+TF ++KG + + A + DE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L + +Q + VSY LI L + G A+RL+
Sbjct: 209 LERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVE 241
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 63/148 (42%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A+ LF + + R P ++ +N + L K + A + +M+ G P+ T
Sbjct: 300 RGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAAT 359
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+L++ C G SVL + + P + TF L+ GL + + +E++
Sbjct: 360 YRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + + S+ +I C ++
Sbjct: 420 KRKVDFDLESWEAVIKYACSEDDKSGSM 447
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+ +L+ + PS++ +N ++ L + A+ L M +G + VT +L+
Sbjct: 200 NACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLM 259
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C LG+ A ++ + RG KP + F+ L+ L ++ A+ E+ + ++
Sbjct: 260 EGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLK 319
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y + +N LCK G+T A ++L
Sbjct: 320 PDVVTYNVFVNYLCKEGKTAEAYKML 345
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA F R +M P+ + FN ++ +K + A + +M R + P +V+ N L
Sbjct: 167 NDA---FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSL 223
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G + A ++ + ++G + N +T+ L++GLC + + A + ++ +G
Sbjct: 224 IGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGC 283
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ +L+N L K G+ A+ L R
Sbjct: 284 KPQLVNFSVLMNDLGKRGKIDEAMVLFR 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L Y A L M +RG P +V ++L+N G++ A + ++ KR
Sbjct: 258 LMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRR 317
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
KP+ +T+ + LC + A + E+ G + N +Y +L++GLC+ G + L
Sbjct: 318 LKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGL 377
Query: 177 RLL 179
+L
Sbjct: 378 SVL 380
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F+ ++ L K A+ L +M R + PD+VT N+ +N C G+ + A+ +
Sbjct: 285 PQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKM 344
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G +PN T+ L+ GLC N + L + + A ++ L+ GL K
Sbjct: 345 LVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLK 404
Query: 169 VGQTRAALRLLR 180
G +L
Sbjct: 405 SGNIDGGYFVLE 416
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N L+N G A + + G++PNT+TF ++KG + + A + DE+
Sbjct: 149 SFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEM 208
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L + +Q + VSY LI L + G A+RL+
Sbjct: 209 LERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVE 241
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 63/148 (42%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A+ LF + + R P ++ +N + L K + A + +M+ G P+ T
Sbjct: 300 RGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAAT 359
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+L++ C G SVL + + P + TF L+ GL + + +E++
Sbjct: 360 YRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMV 419
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ + + S+ +I C ++
Sbjct: 420 KRKVDFDLESWEAVIKYACSEDDKSGSM 447
>Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:23816810-23816418 | 20130731
Length = 130
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M F I PD+V+ ILI+ Y H+G+M A ++ ++ +G PN + + +L+ GL ++Q
Sbjct: 1 MSFENIKPDVVSYGILIDSYSHIGEMCGACNLFNEMEHKGLDPNLMIYNSLLNGLFKSNQ 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
AL+ D++ QGI+L+ Y LI GL G+ A L
Sbjct: 61 PNEALKLFDKMKTQGIRLDDCVYATLILGLSMSGRHDMANMFLE 104
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A +F +L++ H PS+I + +L L K + SL Q+E + + + + N
Sbjct: 90 PQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFYNA 149
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN + G M A + K+ + G++P+T T++ LIKG + + A++ D +L G
Sbjct: 150 VINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDG 209
Query: 152 -IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y +LI LC+ G A ++
Sbjct: 210 NSKPDLQTYNMLIKALCQSGNMSEAWNIV 238
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM-------PDI 86
DA ++ + PS ++ ++ K Y I M+ +M PD+
Sbjct: 162 DAKKTVQKMKESGFRPSTGTYSNLI------KGYGIVGKSGEAMKLLDLMLTDGNSKPDL 215
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
T N+LI C G MS A++++ K+ G P+++TF T+ G LN + A E
Sbjct: 216 QTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILE 275
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G++ N+ ++ +++NG K GQ + AL+ +
Sbjct: 276 MQRKGLEPNERTFTVIVNGYYKEGQIKEALQFV 308
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L ++ + S A ++ +M G++PD VT N + Y + + A ++
Sbjct: 213 PDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAM 272
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ ++ ++G +PN TFT ++ G Q+K ALQF + G + N + + +LING
Sbjct: 273 ILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGF 330
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 31 LPNDAVCLFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+ D V RL+ + + P ++ ++ I+ + + M G+ PD+
Sbjct: 334 MDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAY 393
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+IL+ Y + A +L +++ G +PN +TFT +I G + ++ A++ D++
Sbjct: 394 SILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCE 453
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N ++ LI G K Q + +L+
Sbjct: 454 LGVSPNLRTFEALIWGYAKADQPWKSEEILQ 484
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLV-KTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ R+ + P+++ FN ++ V + + L EF+ I PD+VT + +
Sbjct: 303 EALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEVLRLMKEFQ-IQPDVVTYSTI 361
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N + G + +L+ G KP+ ++ L+KG + + ++A + +++ G+
Sbjct: 362 MNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGV 421
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V++ +I+G G+ A+++
Sbjct: 422 RPNVVTFTNVISGWGSSGRMDNAIKIF 448
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
SLH +S + +D + + N + +P+++ +N +L L K+ +ISL +M
Sbjct: 331 SLHGYS-DVVDDILKIMN---ETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENC 386
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PDIVT N L+N C G + + +L + P +T+ +I GL +K A +
Sbjct: 387 SPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKE 446
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E++ +GI + +++ L+ GLC+V Q A+ + +
Sbjct: 447 MYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
++ L+ +++ +P I+ +N +L L K +I L H + P +VT NI+IN
Sbjct: 374 SISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVIN 433
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ + A + +++++G P+ IT TL+ GLC Q + A++ + G ++
Sbjct: 434 GLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKI 493
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+Y +I GLC+ + +A++ L
Sbjct: 494 KGYAYKCVILGLCEQKKLDSAIQAL 518
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 34 DAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D C + N ++ P I FN ++ L K H A+ M G +PD T N +
Sbjct: 162 DKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTI 221
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++A S L++G+ P IT+ L++ +C + RAL+ +++ +G
Sbjct: 222 IRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGC 281
Query: 153 QLNQVSYGILINGLCKVGQTR 173
+ Y L+N K G +
Sbjct: 282 CPDINMYNSLVNFSSKQGNYK 302
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + + LL P+++ +N ++ L + + + M I P +VT NIL+
Sbjct: 303 DTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILL 362
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + + S+ K++ P+ +T+ TL+ LC + ++Q L
Sbjct: 363 NSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCS 422
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
V+Y I+INGL ++ ++A +
Sbjct: 423 PGLVTYNIVINGLARMRSIKSAKEM 447
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+ PN AV + L+ P +I + ++ + K S A+ + M G PDI
Sbjct: 227 DKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDIN 286
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL---NDQVKRALQFH 144
N L+N G V++ +L G +PN +T+ LI L L +D V L+
Sbjct: 287 MYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIM 346
Query: 145 DELLAQGIQLNQVSYGILINGLCKVG 170
+E I V+Y IL+N LCK G
Sbjct: 347 NE---TSISPTLVTYNILLNSLCKSG 369
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N ++ K +Y + + G+ P++VT NILI+ G V +
Sbjct: 283 PDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDI 342
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + + P +T+ L+ LC + + R++ + +++++ + V+Y L+N LCK
Sbjct: 343 LKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCK 402
Query: 169 VGQTRAALRLL 179
G +++LL
Sbjct: 403 EGFIDESIQLL 413
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R+ Q+ H PS ++ L++ + + M G +PD +T N +I C G
Sbjct: 138 RMSQIPHFPSC---TNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRG 194
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A L + G P+ T+ T+I+ + A+ F + L +G ++Y
Sbjct: 195 HLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYA 254
Query: 161 ILINGLCK-VGQTRA 174
+L+ +CK G +RA
Sbjct: 255 LLVELVCKHCGASRA 269
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
SLH +S + +D + + N + +P+++ +N +L L K+ +ISL +M
Sbjct: 331 SLHGYS-DVVDDILKIMN---ETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENC 386
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PDIVT N L+N C G + + +L + P +T+ +I GL +K A +
Sbjct: 387 SPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKE 446
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E++ +GI + +++ L+ GLC+V Q A+ + +
Sbjct: 447 MYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
++ L+ +++ +P I+ +N +L L K +I L H + P +VT NI+IN
Sbjct: 374 SISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVIN 433
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ + A + +++++G P+ IT TL+ GLC Q + A++ + G ++
Sbjct: 434 GLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKI 493
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+Y +I GLC+ + +A++ L
Sbjct: 494 KGYAYKCVILGLCEQKKLDSAIQAL 518
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 34 DAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D C + N ++ P I FN ++ L K H A+ M G +PD T N +
Sbjct: 162 DKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTI 221
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G ++A S L++G+ P IT+ L++ +C + RAL+ +++ +G
Sbjct: 222 IRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGC 281
Query: 153 QLNQVSYGILINGLCKVGQTR 173
+ Y L+N K G +
Sbjct: 282 CPDINMYNSLVNFSSKQGNYK 302
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + + LL P+++ +N ++ L + + + M I P +VT NIL+
Sbjct: 303 DTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILL 362
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + + S+ K++ P+ +T+ TL+ LC + ++Q L
Sbjct: 363 NSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCS 422
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
V+Y I+INGL ++ ++A +
Sbjct: 423 PGLVTYNIVINGLARMRSIKSAKEM 447
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+ PN AV + L+ P +I + ++ + K S A+ + M G PDI
Sbjct: 227 DKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDIN 286
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL---NDQVKRALQFH 144
N L+N G V++ +L G +PN +T+ LI L L +D V L+
Sbjct: 287 MYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIM 346
Query: 145 DELLAQGIQLNQVSYGILINGLCKVG 170
+E I V+Y IL+N LCK G
Sbjct: 347 NE---TSISPTLVTYNILLNSLCKSG 369
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N ++ K +Y + + G+ P++VT NILI+ G V +
Sbjct: 283 PDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDI 342
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + + P +T+ L+ LC + + R++ + +++++ + V+Y L+N LCK
Sbjct: 343 LKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCK 402
Query: 169 VGQTRAALRLL 179
G +++LL
Sbjct: 403 EGFIDESIQLL 413
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R+ Q+ H PS ++ L++ + + M G +PD +T N +I C G
Sbjct: 138 RMSQIPHFPSC---TNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRG 194
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A L + G P+ T+ T+I+ + A+ F + L +G ++Y
Sbjct: 195 HLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYA 254
Query: 161 ILINGLCK-VGQTRA 174
+L+ +CK G +RA
Sbjct: 255 LLVELVCKHCGASRA 269
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L NDA L++ ++ R +P +I ++ +++ + I L ++M I PD+ T N
Sbjct: 65 LVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFN 124
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I ++ +C G++ A VL+ ++K G KP+ +T+ TL+ G CL ++ A + +
Sbjct: 125 ISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQS 184
Query: 151 GI 152
G+
Sbjct: 185 GV 186
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 52/199 (26%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
ND + LFN++ P + FN + K A + M GI P +VT N L
Sbjct: 102 NDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTL 161
Query: 93 INCYCHLGQMSVA-------------------------------------FSVLAKILKR 115
+N YC + +M++A +S L I+
Sbjct: 162 MNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHD 221
Query: 116 ---------------GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
G +P+ T+T IKGLC + ++K A + ++LL +G L+ +Y
Sbjct: 222 RGQPPDIITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYT 281
Query: 161 ILINGLCKVGQTRAALRLL 179
++I G C G + AL LL
Sbjct: 282 VMIQGFCDKGLFKEALALL 300
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++I ++ I+ + K K + A L +M + I PD++T + LI+ +C +G+++ +
Sbjct: 48 PNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGL 107
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ P+ TF + C +VK A ++ GI+ + V+Y L+NG C
Sbjct: 108 FNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCL 167
Query: 169 VGQTRAA 175
V + A
Sbjct: 168 VKEMNMA 174
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C +GQ A +L ++ + +PN I ++T+I G+C V A + E++A+ I +
Sbjct: 26 CKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDV 85
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++Y LI+G C VG+ + L
Sbjct: 86 ITYSALISGFCIVGKLNDTIGLF 108
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQ 76
+ +H +++P+ V ++ L+ + H P II +N IL
Sbjct: 197 YEEMHCR-KNIPD--VVTYSSLVDIMHDRGQPPDIITYNSILD----------------- 236
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
GI PD+ T I I C G++ A V +L +GY + T+T +I+G C
Sbjct: 237 ----GIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGL 292
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
K AL ++ G + Y I+I L + + A +LLR
Sbjct: 293 FKEALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLR 336
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 61/110 (55%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ L +++ + + P+++ + +I+ C ++ AF + ++++ + P+ IT++ LI
Sbjct: 34 ALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALIS 93
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G C+ ++ + +++ A+ I + ++ I ++ CK G+ + A +L
Sbjct: 94 GFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVL 143
>Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:14509689-14508562 | 20130731
Length = 238
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
S+ KI+K G+ P+T L +GL L ++ +AL +++ L +G +L+ VSY ILI GL
Sbjct: 31 SLFDKIIKTGHHPSTPILNDLFEGLSLQGEIHKALLVYNDFLLKGFKLDYVSYDILIEGL 90
Query: 167 CKVGQTRAALRLLR 180
CK+G+T A+ LLR
Sbjct: 91 CKIGETEKAIELLR 104
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N + LF+++++ H PS N + L A+ + + +G D V+ +IL
Sbjct: 27 NSKISLFDKIIKTGHHPSTPILNDLFEGLSLQGEIHKALLVYNDFLLKGFKLDYVSYDIL 86
Query: 93 INCYCHLGQMSVAFSVLAKI-LKRGYKPNTIT--FTTLIKGLCLNDQVKRALQFHDELLA 149
I C +G+ A +L ++ + GY + + +I LC + +V +A + E++
Sbjct: 87 IEGLCKIGETEKAIELLRQVKIDDGYSNFNVRSFYNNIIFRLCKDRRVNQAYDLYSEMIV 146
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ I + ++Y LI G C VGQ + A+ L R
Sbjct: 147 KKINPDAITYHNLIYGYCIVGQFKQAIALFR 177
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 75/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA L+ ++ +P+++ + ++ A+ L +M I P++ T N L
Sbjct: 8 NDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGL 67
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G++ A +VL ++++ K + + +++L+ G CL ++V +A + + +
Sbjct: 68 VDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAEREL 127
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY I+IN CK+ A++L
Sbjct: 128 SYDVRSYNIMINEFCKMKMVDEAIKLFE 155
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF +++ P++ FN ++ K A ++ + M + + D+V + L+
Sbjct: 44 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 103
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC + ++ A S+ + +R + ++ +I C V A++ +E+ + I
Sbjct: 104 NGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF 163
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GLCK G+ A+ L+
Sbjct: 164 PDVVTYHTLIDGLCKSGRLSYAMELV 189
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F + + + + +N ++ K K AI L +M + I PD+VT + LI+
Sbjct: 115 AQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLID 174
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++S A ++ ++ RG PN IT+ ++ LC N HD +L+ G L
Sbjct: 175 GLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN---------HDGVLSSGKSL 225
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 66/131 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N +++ ++ ++ ++ A S+ M R + D+ + NI+IN +C
Sbjct: 83 VLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFC 142
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + A + ++ + P+ +T+ TLI GLC + ++ A++ DE+ +G N +
Sbjct: 143 KMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 202
Query: 158 SYGILINGLCK 168
+Y +++ LCK
Sbjct: 203 TYCPIVDVLCK 213
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%)
Query: 36 VCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
V F+ +L P + +N +L+ + A L +M+ +GI+ D T N ++
Sbjct: 269 VKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDT 328
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C GQ+ +A VL ++ R P +T++T+I G + ++ AL ++E+ + I ++
Sbjct: 329 LCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVD 388
Query: 156 QVSYGILINGLCKVGQTRAAL 176
+VSY ++ K+G+ A+
Sbjct: 389 RVSYNTMVGIYAKLGRFDEAI 409
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNI 91
+DAV LF + P++I +N ++ K + + + + +M GI+PD +T N
Sbjct: 230 SDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNS 289
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L++ G A +L+++ ++G + T+ T + LC Q+ A + +E+ ++
Sbjct: 290 LLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRR 349
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ V+Y +I+G K AL L
Sbjct: 350 VWPTVVTYSTMIDGCAKANLLEDALNL 376
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ LF H ++ F+ +++ + H+S A+ L M G+ P++++ N L
Sbjct: 195 NHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSL 254
Query: 93 INCYCHLGQMSVAFSVLAK----ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
I+ + V F V+ K +L G P+ +T+ +L+ + A + E+
Sbjct: 255 IDAGA---KGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMD 311
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+GI + +Y ++ LCK GQ A R+L
Sbjct: 312 QKGIVRDAFTYNTYLDTLCKGGQIDLARRVLE 343
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+L DA+ L+ + + + +N ++ K + AI +ME G+ D+VT
Sbjct: 368 NLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTY 427
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N L++ Y G + ++ PNT+T++T+I + A+ + +
Sbjct: 428 NALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKK 487
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++++ V Y +I+ LCK G +++ LL
Sbjct: 488 AQLEVDVVFYTSIIDSLCKNGLVESSIMLL 517
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 46 RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVA 105
R P+++ ++ ++ K A++L +M+ R I D V+ N ++ Y LG+ A
Sbjct: 349 RVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEA 408
Query: 106 FSVLAKILKRGYKPNTITFTTLIKG---LCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
++ G K + +T+ L+ G + D+V+R + E+ A I N ++Y +
Sbjct: 409 IGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFE---EMKAWNIYPNTLTYSTM 465
Query: 163 INGLCKVGQTRAALRLLR 180
I+ K G + A+ + +
Sbjct: 466 IDVYTKGGMFQEAMDVYK 483
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R +DA L+ ++L P+++ + ++ K + +M RG PD++
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLML 554
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LN ++C G++ ++ +I +G P+ +++ LI GL + + E+
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
QG+ L+ ++Y +I+G CK G+ A +LL
Sbjct: 615 EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 74/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + P + ++ ++ LVK L ++M+ +G+ D++ N +I+ +C
Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A+ +L ++ +G +P +T+ +++ GL D++ A +E + G+ LN V
Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y LI+G KVG+ A +L
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLIL 715
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
F+ + P + + ++ L K + A+ L +++ +P + N +I Y
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ A+S+L + ++G P+ I + ++ L +V+ AL+ HDE + Q N
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE-MRQDAAPNLT 413
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y ILI+ LCK G+ AAL++
Sbjct: 414 TYNILIDMLCKAGELEAALKV 434
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + L+Q TP+ +N +L LVK + A M+ P+ +T +I+
Sbjct: 709 DEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIM 768
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C + + + AF ++ K+G KPN IT+TT+I GL V A D A G
Sbjct: 769 INGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGG 828
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ Y +I GL + A
Sbjct: 829 VPDSACYNAMIEGLSSANKAMDA 851
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 73/142 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ ++ +P ++ N + + K +L +++ +G++PD+ + +ILI+
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + + ++ ++G + + + T+I G C + +V +A Q +E+ +G+Q V
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+YG +++GL K+ + A L
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLF 680
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF L R P + +N ++ + A SL + + +G +P ++ N +
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G++ A + + +++ PN T+ LI LC +++ AL+ D + G+
Sbjct: 385 LTCLGRKGKVEEALRIHDE-MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGL 443
Query: 153 QLNQVSYGILINGLCK 168
N ++ I+I+ LCK
Sbjct: 444 FPNIMTVNIMIDRLCK 459
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ + LF+++ ++ + ++ F ++ + A+SL +M+ D+V N+
Sbjct: 219 PDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNV 278
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I+C+ +G++ +A+ ++ +G P+ +T+TTLI LC ++ A++ +EL
Sbjct: 279 CIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL---- 334
Query: 152 IQLNQ-----VSYGILINGLCKVGQTRAALRLL 179
LN+ +Y +I G G+ A LL
Sbjct: 335 -DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLL 366
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 44 QMRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+MR P++ +N ++ L K A+ + M+ G+ P+I+T+NI+I+ C +
Sbjct: 403 EMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQK 462
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A S+ + + P++ TF +LI GL +V A ++++L N V Y
Sbjct: 463 LDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTS 522
Query: 162 LINGLCKVGQ 171
LI K G+
Sbjct: 523 LIQNFFKCGR 532
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 63/146 (43%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + + + + P+ + ++ L ++L HQM+ G ++ L+
Sbjct: 186 EAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ G++ A S+L ++ + + + + I +V A +F E+ AQG+
Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI LCK + A+ L
Sbjct: 306 PDDVTYTTLIGVLCKARRLDEAVELF 331
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L K H A+ + E +G D V + +++ +C + A S+
Sbjct: 371 PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSL 430
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ + +G P+ +T+T +I G C ++ A + ++ G + N V+Y +L+NGLC
Sbjct: 431 VIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH 490
Query: 169 VGQTRAALRLL 179
G++ A ++
Sbjct: 491 NGKSLEAREMI 501
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + N + LVK A+ +M+ GI PDIV+ N LI YC + ++ A +
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALEL 324
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL-NQVSYGILINGLC 167
+A++ +G P+ +++ T++ LC + +V+ + + ++ + +QV+Y LI L
Sbjct: 325 IAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALS 384
Query: 168 KVGQTRAALRLLR 180
K G AL LR
Sbjct: 385 KHGHADDALVFLR 397
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH--------- 98
P ++ + I+ + A + QM G P+ VT +L+N CH
Sbjct: 440 NPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEARE 499
Query: 99 --------------------------LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
G++S A + +++++G+ PN + LI+ LC
Sbjct: 500 MINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLC 559
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
N V A ++ +E L +G +N V++ +I G C++G AAL +L
Sbjct: 560 RNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLE 607
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 70/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L +++ P+ ++ N ++ L + ++ A + +G ++V +
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C +G + A S+L + P+ IT+TTL L ++ A + ++L +GI
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
V+Y +I+ C+ G+ ++LL
Sbjct: 650 DPTPVTYRAVIHRFCQWGRVDDMMKLLE 677
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P + + ++ L K + L M + ++PD VT N LI G A
Sbjct: 335 PDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALV 394
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L + ++G+ + + ++ ++ C N + +A ++ ++G + V+Y +I+G C
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454
Query: 168 KVGQTRAALRLLR 180
+VG+ A ++L+
Sbjct: 455 RVGKIDEAKKMLQ 467
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+ I ++ ++ L + S A L+ +M +G +P+ V +N+LI C + A
Sbjct: 510 TPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKK 569
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L + L +G N + FT++I G C + AL +++ + ++Y L + L
Sbjct: 570 YLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALG 629
Query: 168 KVGQTRAALRLL 179
K + A L+
Sbjct: 630 KKSRLDEASELI 641
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
Q R+ I + +L L KT+ A + M RGI + ++ Y G +
Sbjct: 190 QWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLR 249
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
A +L + K G +P+ T I L +++++AL+F + + GI+ + VSY LI
Sbjct: 250 NALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLI 309
Query: 164 NGLCKVGQTRAALRLL 179
G C V + AL L+
Sbjct: 310 KGYCDVHRIDDALELI 325
>Medtr5g019860.1 | PPR containing plant-like protein | HC |
chr5:7531493-7533235 | 20130731
Length = 410
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
S+P DA +FN++ + P+ + +L L K ++ A+ L M +G +PDIV
Sbjct: 220 ESMPQDADAIFNKMKETGLIPNAV---AMLDGLCKDGNFQEALKLFGLMREKGTIPDIVI 276
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+++ Y + A + K+ PN ++T LI+GL ++ A++F E+L
Sbjct: 277 YTAVVDGYTKAHKADDAIRIFRKMQSNSISPNAFSYTVLIQGLYKCSKLHDAVEFCVEML 336
Query: 149 AQGIQLNQVSYGILINGLCK 168
G LN ++ L++G CK
Sbjct: 337 EAGHSLNVTTFVGLVDGFCK 356
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K+ + A+ L +M+ GI PD VT + ++N C G++ A S + G N +
Sbjct: 364 KSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAV 423
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++LI GL +V A + DE+ +G + Y LI+GLCK G+ AL L++
Sbjct: 424 FYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVK 481
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F+ + + P +N ++ L K A++L +ME G + T IL
Sbjct: 439 DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTIL 498
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + + A + ++ +G PN F L GLCL+ +V RA + DEL G+
Sbjct: 499 ISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGV 558
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
L + +Y +I LCK G+ + A +L
Sbjct: 559 VL-ETAYEDMIGALCKAGRVKEACKL 583
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT-LNILINCY 96
+F+ + + R P ++ +N ++ K AI + +ME + PD+V+ + ++ CY
Sbjct: 234 VFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACY 293
Query: 97 ----------------------------------CHLGQMSVAFSVLAKILKRGYKPNTI 122
C +G++ +++ +++ G K N
Sbjct: 294 AEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKA 353
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+T LI + AL+ + + GI+ ++V+Y ++NGLCK G+ AL
Sbjct: 354 VYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEAL 407
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ +N +L LV + A + M+ PD+VT N +I YC G+ A +
Sbjct: 210 PSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEM 269
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ +P+ +++ T+++ V L + E+ +G ++ Y ++I GLCK
Sbjct: 270 VREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCK 329
Query: 169 VGQ 171
+G+
Sbjct: 330 MGK 332
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+CY G A + ++ G +P+ +T++ ++ GLC + +V+ AL + G
Sbjct: 358 LIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENG 417
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +N V Y LI+GL K G+ A ++
Sbjct: 418 VVVNAVFYSSLIDGLGKAGRVDEAEKVF 445
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K+ + A+ L +M+ GI PD VT + ++N C G++ A S + G N +
Sbjct: 364 KSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAV 423
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+++LI GL +V A + DE+ +G + Y LI+GLCK G+ AL L++
Sbjct: 424 FYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVK 481
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F+ + + P +N ++ L K A++L +ME G + T IL
Sbjct: 439 DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTIL 498
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + + A + ++ +G PN F L GLCL+ +V RA + DEL G+
Sbjct: 499 ISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMGV 558
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
L + +Y +I LCK G+ + A +L
Sbjct: 559 VL-ETAYEDMIGALCKAGRVKEACKL 583
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 35/174 (20%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT-LNILINCY 96
+F+ + + R P ++ +N ++ K AI + +ME + PD+V+ + ++ CY
Sbjct: 234 VFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACY 293
Query: 97 ----------------------------------CHLGQMSVAFSVLAKILKRGYKPNTI 122
C +G++ +++ +++ G K N
Sbjct: 294 AEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKA 353
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+T LI + AL+ + + GI+ ++V+Y ++NGLCK G+ AL
Sbjct: 354 VYTALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEAL 407
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ +N +L LV + A + M+ PD+VT N +I YC G+ A +
Sbjct: 210 PSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKGYCKAGKTRKAIEM 269
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ +P+ +++ T+++ V L + E+ +G ++ Y ++I GLCK
Sbjct: 270 VREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVPSHGYSLVICGLCK 329
Query: 169 VGQ 171
+G+
Sbjct: 330 MGK 332
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+CY G A + ++ G +P+ +T++ ++ GLC + +V+ AL + G
Sbjct: 358 LIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENG 417
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +N V Y LI+GL K G+ A ++
Sbjct: 418 VVVNAVFYSSLIDGLGKAGRVDEAEKVF 445
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
H+ D V + L ++ T P ++ + + V +A+ + +M +G+
Sbjct: 388 HAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF 447
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD N+L++ C G+ A +L+++L +P+ + TL+ G N+++ +A +
Sbjct: 448 PDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATEL 507
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ ++++GI V Y ++I GLCK G+ A+
Sbjct: 508 FEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAV 540
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 71/143 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A LF ++ P ++ +N ++ L K + A+S ++M+ PD T + +
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ Y + A + +++K+ YKPN + +T+LI G C + RA + + + +
Sbjct: 562 IDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ N V+Y ILI G K G+ A
Sbjct: 622 EPNVVTYTILIGGFSKTGKPEKA 644
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L + +L + P + ++ ++ A L + +GI P +V N++I
Sbjct: 469 AKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIK 528
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+M+ A S + K+ + P+ T +T+I G + AL+ +++ Q +
Sbjct: 529 GLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKP 588
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LING CK+ A ++ R
Sbjct: 589 NVVAYTSLINGFCKIADMSRAEKVFR 614
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV N++ H P + ++ VK A+ + QM + P++V LI
Sbjct: 538 DAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLI 597
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C + MS A V + +PN +T+T LI G + ++A F + +L
Sbjct: 598 NGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657
Query: 154 LNQVSYGILINGLCKVGQT 172
N ++ LINGL + T
Sbjct: 658 PNDTTFHYLINGLTNITNT 676
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 33 NDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG------IMPD 85
+ AV +F + ++ + P ++ N +L LVK +A L +M RG ++ D
Sbjct: 145 DKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVD 204
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
++ I++ C +G++ ++ G PN + + +I G C +KRA + +
Sbjct: 205 NYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFE 264
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
EL +G +YG LI+G CK G+ + +LL
Sbjct: 265 ELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLL 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 71/149 (47%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L + A + + +M P I +N ++ A + + R ++P+ +
Sbjct: 325 LVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYT 384
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ YC G +A +L KI + G KP+ +++ I G ++ AL ++++ +
Sbjct: 385 PLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEK 444
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G+ + Y +L++GLCK G+ AA LL
Sbjct: 445 GVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ +F ++++ ++ P+++ + ++ K S A + M+ + P++VT IL
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC----------LNDQVKRA-- 140
I + G+ A S +L PN TF LI GL N++ R+
Sbjct: 632 IGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLI 691
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
L F ++++G +Y +I LCK G A
Sbjct: 692 LDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTA 726
Score = 50.4 bits (119), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P++ N ++ + A+ + + + E P +V N L+NC G++ VA
Sbjct: 126 PTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACE 185
Query: 108 VLAKILKRG------YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ K+L+RG + + ++KGLC +V+ + D+ G N V Y +
Sbjct: 186 LYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNV 245
Query: 162 LINGLCKVGQTRAALRLL 179
+I+G CK G + A R+
Sbjct: 246 IIDGYCKKGDLKRATRVF 263
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G +P++V N++I+ YC G + A V ++ +G+ P T+ LI G C + +
Sbjct: 235 GCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVV 294
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
Q +E+ G+ +N + +I+ K G A ++R
Sbjct: 295 DQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMR 334
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N I+ K A + +++ +G +P + T LI+ +C G+ V +
Sbjct: 238 PNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQL 297
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G N F ++I V +A + + G + + +Y ILIN C
Sbjct: 298 LNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCS 357
Query: 169 VGQTRAALRLL 179
G+ + A L
Sbjct: 358 GGRIKEAEEFL 368
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 33 NDAVCL--FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
N+ CL F RL + +PSI+ + ++ K S A+ +S M+ GI ++ T +
Sbjct: 458 NEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYS 517
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+L N + L + AFSV I K G KP+ I + ++K C + RA+ ++ +
Sbjct: 518 MLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRE 577
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ +I+G + G+TR AL +
Sbjct: 578 RHRATTRTFLPIIHGFARAGETRRALEIF 606
Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+C+ ++ + RH + F I+ + A+ + M G +P + T N LI
Sbjct: 567 AICIVKQMQRERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALIL 626
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
QM A +L ++ G PN T+TTL++G ++A Q+ L G+++
Sbjct: 627 GLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEI 686
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y L+ CK G+ ++AL + +
Sbjct: 687 DVYTYEALLKACCKSGRMQSALAVTK 712
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 62/126 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ + VK K ++ A S+ + G+ PD++ N ++ +C +G M A ++ ++
Sbjct: 516 YSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQ 575
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ ++ T TF +I G + +RAL+ D + G +Y LI GL + Q
Sbjct: 576 RERHRATTRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQME 635
Query: 174 AALRLL 179
AL++L
Sbjct: 636 KALQIL 641
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A L QM G+ PDI T IN C G M A V+ ++ RG KPN T+TTLI
Sbjct: 742 AADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIH 801
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
G ++AL+ ++L G++ ++ Y L+ L
Sbjct: 802 GWARAAFPEKALKCFEDLKVAGLKPDRAVYHCLMTSL 838
Score = 57.4 bits (137), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F+ + + P++ +N ++ LV+ A+ + +M G+ P+ T L+
Sbjct: 602 ALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQ 661
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y LG AF + G + + T+ L+K C + +++ AL E+ ++ I
Sbjct: 662 GYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPR 721
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N Y ILI+G + G A L++
Sbjct: 722 NTFVYNILIDGWARRGDVWEAADLMQ 747
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 62/127 (48%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ + +L K+ A++++ +M + I + NILI+ + G + A ++
Sbjct: 688 VYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQ 747
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
++ K G +P+ T+T+ I C ++ A Q E+ A+GI+ N +Y LI+G +
Sbjct: 748 QMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWARAA 807
Query: 171 QTRAALR 177
AL+
Sbjct: 808 FPEKALK 814
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + N +++ P+ N +L L K S A + +M + D VT NI++
Sbjct: 416 EAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVV 475
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYK----------------------PNTITFTTLIKGL 131
N C G++ A V++++ G P+ IT+TTLI GL
Sbjct: 476 NGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGL 535
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
C +++ A + E++A+ + + V+Y + CK G+ +ALR+L+
Sbjct: 536 CKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLK 584
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ + +++ P+I +N ++ L + A L M G+ PD VT L++ YC
Sbjct: 350 VLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYC 409
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A ++L +++++G PNT T TL+ L + A + ++ + QL+ V
Sbjct: 410 SKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTV 469
Query: 158 SYGILINGLCKVGQTRAA 175
+ I++NGLC+ G+ A
Sbjct: 470 TCNIVVNGLCRNGELEKA 487
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM----P 84
+ + ++A L R+ + P ++ FN ++ L + A + M+ G + P
Sbjct: 232 QDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKP 291
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++VT N+++ +C G M A S++ + K G + ++ T + GL N ++
Sbjct: 292 NVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVL 351
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE++ GI+ N SY I+++GLC+ A RL+
Sbjct: 352 DEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
+ P +I + ++ L K A +M + + PD VT + + +C G++S A
Sbjct: 521 NVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSAL 580
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
VL + + G T+ +LI GL Q+ DE+ +GI + +Y +IN L
Sbjct: 581 RVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640
Query: 167 CKVGQTRAALRLL 179
C+ G+T+ A LL
Sbjct: 641 CEGGKTKDATSLL 653
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ L+ ++Q P FN ++ L ++ A L +M +G P+ T+ I
Sbjct: 132 PHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGI 191
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+ +C G+ A + K G N + + TL+ C D A + + + +G
Sbjct: 192 LVRGFCRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + V++ I+ LC+ G+ A R+ R
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFR 278
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKG 130
L +M RGI PDI T N +INC C G+ A S+L ++L +G PN +F LIK
Sbjct: 616 GLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKA 675
Query: 131 LCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
C + K A + D L+ + Y ++ N L G+ A L
Sbjct: 676 FCKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSDAKELFE 724
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 30 SLPNDAVCLFNRLLQ-------MRHTPSIIE-------------FNKILTPLVKTKHYSI 69
LP V FN +L+ M S++E +N L L++
Sbjct: 287 GLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLE 346
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
S+ +M GI P+I + NI+++ C M A ++ ++ G P+T+T+TTL+
Sbjct: 347 GRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLH 406
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G C +V A +E++ +G N + L+N L K G+ A +L+
Sbjct: 407 GYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQ 457
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 11 RNPTFLLAMPFSSLHSHSRSLPN--------DAVCLFNRLLQMRHT----------PSII 52
NP +A +S+H+ S ++P+ + +C +L + + P +
Sbjct: 505 ENP---VAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSV 561
Query: 53 EFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKI 112
++ + K S A+ + ME G + T N LI GQ+ + ++ ++
Sbjct: 562 TYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEM 621
Query: 113 LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQVSYGILINGLCKVGQ 171
+RG P+ T+ +I LC + K A E+L +G + N S+ ILI CK G
Sbjct: 622 RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGD 681
Query: 172 TRAALRLL 179
+ A L
Sbjct: 682 FKVACELF 689
>Medtr7g025610.1 | PPR containing plant-like protein, putative | HC
| chr7:8534854-8532764 | 20130731
Length = 646
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 85/176 (48%), Gaps = 36/176 (20%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF++++Q +P+ + + ++ ++++ ++A+ L +M GI+PD+V N+LI+C
Sbjct: 236 LFDKMIQSCCSPNSVTYTPLIKAVMESDDVTLALRLEQKMNSVGIVPDLVFYNMLIDCLS 295
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK------------------- 138
G A V + + +KP+ TFT+L+ +C ++Q
Sbjct: 296 KSGMHEEAIRVFEQ---KNFKPDKYTFTSLLSAICRSEQFDLLPKLVQHCKHISRDLVFC 352
Query: 139 --------------RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
RAL+ ++ ++++G + ++ ++ L++ LC + A+++ R
Sbjct: 353 NALLISYVKAGYSSRALELYERMISEGFKPDKYTFAGLLSALCAENRNDEAVKVWR 408
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+L++R+ P+ F+ +L K + + M GI + +LI+ +C LG
Sbjct: 169 EMLRLRYCPNASTFSAVLNAFCKMNAFRQVYQILGLMIGLGIELSVNVWTVLIHHFCKLG 228
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ VA + K+++ PN++T+T LIK + +D V AL+ ++ + GI + V Y
Sbjct: 229 KLDVADDLFDKMIQSCCSPNSVTYTPLIKAVMESDDVTLALRLEQKMNSVGIVPDLVFYN 288
Query: 161 ILINGLCKVGQTRAALRLLR 180
+LI+ L K G A+R+
Sbjct: 289 MLIDCLSKSGMHEEAIRVFE 308
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+KGLCLN Q+ A++FH++L+AQG QL+ ++YG LIN LCK +T AA+ LLR
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLR 53
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 34 DAVCLFNRLLQMRHT---PSIIEFNKILTP----------LVKTKHYSIA-ISLSHQMEF 79
DA LFN ++ +T P ++ ++ ++ L K + A I + M
Sbjct: 82 DAFDLFNEMVLKYNTSLLPDVVTYSPLINDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQ 141
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
G+ PD+ N I+ Q +A + + +RG PN +T +IKGLC +V
Sbjct: 142 VGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDE 201
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
AL +E+ ++ + + Y +I+GL K G+ AL+L+
Sbjct: 202 ALNLFEEMRSKNMTPDAKIYTSIIDGLFKSGRDTCALKLV 241
>Medtr5g077220.1 | PPR containing plant-like protein | HC |
chr5:32962861-32959451 | 20130731
Length = 981
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+ R I+EFN ++ K HY A+ L +M+++GI P T N +I +
Sbjct: 493 KARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVD 552
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
A + ++ + G+KP+ TF+ +I Q+ A+ + E+++ G++ N+ YG LI
Sbjct: 553 QARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALI 612
Query: 164 NGLCKVGQTRAALR 177
NG + G+ AL+
Sbjct: 613 NGFAEHGRLDEALQ 626
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 63/142 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV LF + +P+ +N I+ L A L+ +M+ G P T + +
Sbjct: 517 DKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAV 576
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I CY LGQ+S A V +++ G KPN + LI G + ++ ALQ+ + G+
Sbjct: 577 IGCYARLGQLSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQESGL 636
Query: 153 QLNQVSYGILINGLCKVGQTRA 174
N V L+ K G +
Sbjct: 637 SANLVVLTTLMKSYSKAGDLKG 658
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI--AISLSHQMEFRGIMPDIVTLNI 91
DA +F +++ FN ++ + H ++ A SL +ME RGI + T NI
Sbjct: 311 DAADVFADMMKSGVAMDTCTFNTLI--FISGSHGNLLEAESLLDKMEERGISSNTRTYNI 368
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++ Y G + A S +I + G P+T+T+ L+ LC + V+ DE+
Sbjct: 369 FLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNS 428
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ L+ +S ++ G A LL+
Sbjct: 429 VSLDALSLSGIVKMYINEGDVDKANDLLQ 457
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF L+ + P +I + ++ + + A + M+ G+ P++ T +I+I+ C
Sbjct: 234 LFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLC 293
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
GQ++ A V ++++ G PN +TF +L++ + ++ LQ ++++ G + +
Sbjct: 294 RCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTI 353
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY LI CK A+++L
Sbjct: 354 SYNFLIESHCKDENLDEAVKVL 375
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 35 AVCLFNRLLQMRHTPSIIE-FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
++ FN + PS E +N+++ K +H+ +A L M+ RG+ + T ++L+
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLV 185
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
Y G + A ++ G KP+ ++F+ +I LC + A F D L +
Sbjct: 186 RRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDS-LKHKFE 244
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ + Y L++G C+ G A +
Sbjct: 245 PDVIVYTSLVHGWCRAGDIAKAEEVF 270
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++N++ ++ I +N ++ K ++ A+ + M +G+ P+ T N + C
Sbjct: 339 VYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIA 398
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L ++ A + AK+ + PNT+T+ L++ + + L+ E+ ++ N
Sbjct: 399 ELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVN 458
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y ILI C+ G A L++
Sbjct: 459 TYRILILMFCEKGHWNNAYNLMK 481
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ ++ P+ + FN ++ VK + + +QM+ G D ++ N LI +C
Sbjct: 304 VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHC 363
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A VL ++K+G PN TF ++ + V A + + ++ N +
Sbjct: 364 KDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTL 423
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y IL+ L+L +
Sbjct: 424 TYNILMRMFADSKSIDMVLKLKK 446
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM--PD 85
+ L +A+ F R+ Q P + +N ++ + +++ A L QME G PD
Sbjct: 165 EQGLAKEALLTFYRMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPD 224
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKR---------------GYKPNTITFTTLIKG 130
+ T +LI+ YC G V S K ++R G P+ + + LI G
Sbjct: 225 VFTYTVLISSYCRYG---VKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALIDG 281
Query: 131 LCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
C +V RAL+ D++ +G N+V+Y I V + A+ LR
Sbjct: 282 CCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLR 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M F+GI+PD+V N LI+ C ++ A + + KRG PN +T+ + I+ + ++
Sbjct: 263 MVFKGIVPDVVAYNALIDGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNE 322
Query: 137 VKRALQFHDELL------AQGIQLNQV-SYGILINGLCKVGQTRAALRLL 179
+ +A++F E+ GI + SY +I+ LC+VG+ A L
Sbjct: 323 IDKAVEFLREMQRSNYDGENGIVVGSCSSYTPIIHALCEVGRVADAWSFL 372
>Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5347631-5344253 | 20130731
Length = 791
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 38 LFNRLLQMRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
LFN + + ++ P + +N +L+ L K + A+ + +++ G PD T IL+
Sbjct: 260 LFNEMKEDKNLFGPDMCTYNSVLSVLCKVGKINDALIVWDELKGCGYEPDEFTYTILVRG 319
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C +M VA + ++ G++P + + ++ GL +V Q +++ +G++ +
Sbjct: 320 CCRTYRMDVALRIFNEMKDNGFRPGVLVYNCVLDGLFKAAKVNEGCQMFEKMAQEGVKAS 379
Query: 156 QVSYGILINGLCKVGQTRAALRLL 179
+Y ILI+GL K G++ A L
Sbjct: 380 CSTYNILIHGLIKNGRSEAGYMLF 403
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF P +N I++ VK +++ A ++ +M + DI T N++I
Sbjct: 604 ACKLFEIFTDAGVDPVSYTYNSIMSSFVKKGYFNEAWAILSEMGEKLCPTDIATYNMIIQ 663
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+G+ +A +VL +LK+G + + + TLI L ++ +F +++ + GI
Sbjct: 664 GLGKMGRADLASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINP 723
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y LI K G+ + A + L+
Sbjct: 724 DVVTYNTLIEIHSKAGRLKDAYKFLK 749
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + + LL+ I+ +N ++ L K QM+ GI PD+VT N LI
Sbjct: 674 ASAVLDGLLKQGGYLDIVMYNTLINALGKAGRIDEVNKFFEQMKSSGINPDVVTYNTLIE 733
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
+ G++ A+ L ++ G PN +T TTL
Sbjct: 734 IHSKAGRLKDAYKFLKMMIDAGCTPNHVTDTTL 766
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 65/136 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ +++ L + P + ++ +T +A+ + ++M+ G P ++ N +
Sbjct: 292 NDALIVWDELKGCGYEPDEFTYTILVRGCCRTYRMDVALRIFNEMKDNGFRPGVLVYNCV 351
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +++ + K+ + G K + T+ LI GL N + + +L +G
Sbjct: 352 LDGLFKAAKVNEGCQMFEKMAQEGVKASCSTYNILIHGLIKNGRSEAGYMLFCDLKKKGQ 411
Query: 153 QLNQVSYGILINGLCK 168
++ ++Y I++ LCK
Sbjct: 412 FVDGITYSIVVLQLCK 427
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI +N +L + + A L +M+ + P +VT L+ YC + ++ A +
Sbjct: 252 PSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEM 311
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ K G KPN I + +I L + K AL + I +Y L+ G CK
Sbjct: 312 VGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCK 371
Query: 169 VGQTRAALRLLR 180
G A ++L+
Sbjct: 372 AGDIEGASKILK 383
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 56/100 (56%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G +P I NI++N + ++ A + ++ +P+ +T+ TL++G C +V++A
Sbjct: 249 GWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKA 308
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L+ E+ +GI+ N + Y +I+ L + G+ + AL ++
Sbjct: 309 LEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMME 348
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 62/130 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I +N I+ L + + A+ + + I P + T N L+ +C G + A +
Sbjct: 322 PNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKI 381
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L K++ RG+ P T+ + +V + + +++ G ++++Y +++ LC+
Sbjct: 382 LKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCE 441
Query: 169 VGQTRAALRL 178
+ A+++
Sbjct: 442 EEKLELAVQV 451
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++ + L+ ++++ H P + ++ +L L + + +A+ +S +M +G D+ T +L
Sbjct: 411 DEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTML 470
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL---IKGLCLNDQVKR 139
+ C + ++ AF+ +++RG P +TF L +K +N+ ++
Sbjct: 471 THLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMARK 520
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN-CYCHLGQMSVAFS 107
P + +N ++ L A+ L +ME ++PD VT N LI+ C+ H G + AF
Sbjct: 43 PDVWTYNTMVRGLCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGS-AAAFK 101
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ--VSYGILING 165
++ ++ RG K N +T ++K C V A ++ G L +SY ++ING
Sbjct: 102 LVEEMKSRGVKENAVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMING 161
Query: 166 LCKVGQTRAALRLL 179
CK G+ A +++
Sbjct: 162 YCKAGKMAKAFKMM 175
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L + + +R P + +N ++ + + + A L +M+ RG+ + VT NI+
Sbjct: 62 DEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIM 121
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNT--ITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ +C G + A + +AK+ + G+ I++ +I G C ++ +A + DE+ +
Sbjct: 122 VKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMGRK 181
Query: 151 GIQLNQVSYGILINGLC 167
G++ + + ++ LC
Sbjct: 182 GLKTDTFTLNTILYTLC 198
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M+ G++P+ T NIL++ YC L + A V + P+ T+ T+++GLC +
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGK 60
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A++ DE+ + + + V+Y LI+G + + AA +L+
Sbjct: 61 IDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVE 104
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +N ++ K K A+ ++ M ++PD+ T N ++ C G++ A +
Sbjct: 8 PNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGKIDEAVRL 67
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ P+ +T+ TLI G + A + +E+ ++G++ N V++ I++ CK
Sbjct: 68 RDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNIMVKWFCK 127
Query: 169 VGQTRAA 175
G A
Sbjct: 128 EGNVDEA 134
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 72/142 (50%)
Query: 36 VCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
V ++ ++ P + +N +L+ + +A L +M+ R I+PD+ T N ++
Sbjct: 304 VKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDT 363
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C GQ+ +A V ++ + PN +T++ ++ G + ++ AL ++E+ + + L+
Sbjct: 364 LCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLD 423
Query: 156 QVSYGILINGLCKVGQTRAALR 177
+VSY L+ K+G A+
Sbjct: 424 RVSYNTLVGIYEKLGNLDEAIE 445
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNIL 92
DAV LF + P++I +N I+ K + + + + +M G+MPD +T N L
Sbjct: 266 DAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSL 325
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ G +A +L+++ R P+ T+ T + LC Q+ A + +E+ ++ +
Sbjct: 326 LSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRV 385
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
N V+Y +++G K AL L
Sbjct: 386 WPNVVTYSAMMDGYAKANLLEDALNL 411
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ K + AI +ME GI D+VT N L++ Y G + +
Sbjct: 425 VSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEE 484
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ R PNT+T++T+I + + A+ + E ++++ V Y +I+ LCK G
Sbjct: 485 MKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGL 544
Query: 172 TRAALRLL 179
+++ LL
Sbjct: 545 MESSIMLL 552
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P+++ +N +L + + A +M+ R D+VT +++
Sbjct: 223 ALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVH 282
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G++ + V ++K G P+ T+ LI+ LC D V+ AL DE++ +G
Sbjct: 283 GFGVAGEVKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVP 342
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N +Y ++I GLC G+ + ++
Sbjct: 343 NLTTYNVVIRGLCHSGEIERGVEFMK 368
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN IL L KTK +A +L + R D V+ NI+ N +C + + +A VL +++
Sbjct: 173 FNTILDVLCKTKRVEMANNLFKTLRGR-FKCDSVSYNIMANGWCLIKRTPMALQVLKEMV 231
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+RG P +T+ TL+KG Q+ A +F E+ + +++ V+Y +++G G+ +
Sbjct: 232 ERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVK 291
Query: 174 AALRLL 179
+ R+
Sbjct: 292 RSKRVF 297
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+ L+ R + +N + K +A+ + +M RG+ P +VT N L+ Y G
Sbjct: 194 KTLRGRFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCG 253
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
Q++ A+ ++ KR + + +T+TT++ G + +VKR+ + D ++ +G+ + +Y
Sbjct: 254 QLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEGLVPSVATYN 313
Query: 161 ILINGLCKVGQTRAAL 176
LI LCK + AL
Sbjct: 314 ALIQVLCKKDSVQNAL 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
G++P + T N LI C + A V +++ +G PN T+ +I+GLC + +++R
Sbjct: 303 EGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIER 362
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++F + G + +Y ++I C G+ L L
Sbjct: 363 GVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFE 403
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +F+ ++ P++ +N ++ L + + +ME G MP + T N++I
Sbjct: 327 NALLVFDEMVGKGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVI 386
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---ALQFHDELLAQ 150
YC G++ + K+ PN T+ LI + + + + A + E++ +
Sbjct: 387 RYYCDEGELEKGLELFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGR 446
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + ++ ++NGL G A +LR
Sbjct: 447 GFLPRKFTFNRVLNGLVLTGNREFANEILR 476
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 71/141 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ LFN + ++ P + +N ++T +V+ A SL ME G PDI + NI+
Sbjct: 494 NEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNII 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N G A + AK+ KP+ +++ T++ L + A + E+ ++G
Sbjct: 554 LNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGF 613
Query: 153 QLNQVSYGILINGLCKVGQTR 173
+ + ++Y ++ + KV + R
Sbjct: 614 EYDLITYSSILEAVGKVDEDR 634
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA ++ +L+ P ++ N ++ L ++ A+ L +M P++VT N +I
Sbjct: 319 DAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTII 378
Query: 94 -NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + S A S L ++ K G P++ T++ LI G C ++V++AL +E+ +G
Sbjct: 379 KSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGF 438
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+Y LIN L K + AA L +
Sbjct: 439 PPCPAAYCSLINSLGKAKRYEAANELFQ 466
Score = 54.3 bits (129), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 21 FSSLHSHSRSLPND--AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME 78
+S+L S L D AV LF+ + + P+ + ++ K A++L H+M
Sbjct: 234 YSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMR 293
Query: 79 FRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
R +P + T LI G++ A+ V +LK G KP+ + LI L +D++K
Sbjct: 294 MRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLK 353
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGL 166
A++ +E+ N V+Y +I L
Sbjct: 354 EAVELFEEMRLLNCTPNVVTYNTIIKSL 381
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHY-SIAISLSHQMEFRGIMPDIVTLNIL 92
+AV LF + + TP+++ +N I+ L + K S A S +M+ G++P T +IL
Sbjct: 354 EAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C ++ A +L ++ ++G+ P + +LI L + + A + EL
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ Y ++I K G+ A+ L
Sbjct: 474 SSSVRVYAVMIKHFGKCGRFNEAMGLF 500
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF L + + S+ + ++ K ++ A+ L ++M+ G +PD+ N LI
Sbjct: 464 LFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMV 523
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
M AFS+ + + G P+ + ++ GL KRA++ ++ + I+ + V
Sbjct: 524 RADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAV 583
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SY ++ L + G A +L++
Sbjct: 584 SYNTVLGCLSRAGLFEEATKLMK 606
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
L+N + H P + ++ +++ K A+ L +M+ G+ P L+ Y
Sbjct: 217 LYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIY 276
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
LG++ A +++ ++ R P T+T LI+GL + +V+ A + +L G + +
Sbjct: 277 FKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDV 336
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
V LIN L + + + A+ L
Sbjct: 337 VLMNNLINILGRSDRLKEAVELF 359
>Medtr3g091460.1 | PPR containing plant-like protein | HC |
chr3:41616039-41619290 | 20130731
Length = 631
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 11 RNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQM-------------RHT------PSI 51
++P + L L H+ +L + V L N +L + RH+ P+I
Sbjct: 76 QSPPYYLNPTDPKLPEHASALTGNRVNLHNTILTLIRQNDLDEAALYTRHSIYSNCRPTI 135
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
N +L L + YS +SL + G++P+I+T N++ Y + A +
Sbjct: 136 FTINAVLFALFRQSRYSDLLSLHRFITQAGVVPNIITYNLIFQTYLDCRKPDTALENFKQ 195
Query: 112 ILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+K + P+ TF LIKGL N+++ RA+ D++ A G + + Y L+ G +
Sbjct: 196 FIKDAPFNPSPTTFRILIKGLVDNNRLDRAMDIKDQMNASGFAPDPLVYHYLMLGHARSS 255
Query: 171 QTRAALRL 178
LR+
Sbjct: 256 DGDGVLRV 263
Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP-----DIVTLNILINCYCHLGQMSV 104
S I +N +L L K + A+ L +M P ++ + N++++ YC G+
Sbjct: 312 SDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFKE 371
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A V + + KP+T++F LI+ LC N + A + + E+ +G+ ++ +YG+L++
Sbjct: 372 AIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGLLMD 431
Score = 50.4 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +F + + R P + FN ++ L A + +ME +G+ PD T +L+
Sbjct: 371 EAIEVFRSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGLLM 430
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + A S K+++ G +PN + L+ GL ++ A F D L+ + ++
Sbjct: 431 DTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKIDDAKFFFD-LMVKKLK 489
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ SY ++ L + G+ L+++
Sbjct: 490 MDVASYQFMMKVLSEAGRLDDVLQIV 515
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSII-----EFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
++A+ LF+R+++ + P+ + FN ++ + AI + M PD +
Sbjct: 330 DEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTL 389
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ N LI C+ G + A V ++ +G P+ T+ L+ ++ A + ++
Sbjct: 390 SFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKM 449
Query: 148 LAQGIQLNQVSYGILINGLCKVGQ 171
+ G++ N Y L++GL KVG+
Sbjct: 450 VESGLRPNLAVYNRLVDGLVKVGK 473
>Medtr1g054690.1 | hypothetical protein | LC |
chr1:23824181-23823561 | 20130731
Length = 206
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKT--KHYSIAISLSHQMEFRGIMPDIVTLNI 91
DA+ +F +L TP EFN +L+ + KT K + + +M GI D+V+ NI
Sbjct: 44 DAIAVFEGMLIEDPTPPTHEFNHLLSSIAKTFPKTNGVVVDSYTEMLKMGISLDLVSYNI 103
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+ CY M + S+ K+ K G++ T TL+K L + +V A+QF++ G
Sbjct: 104 LMKCYADAKLMGYSLSLFGKVFKLGFQSTGFTLNTLLKPLFSSGKVVEAIQFYNSSDFYG 163
Query: 152 IQ 153
I
Sbjct: 164 IS 165
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A C F + +M P+++ +N +L + + A+ L M+ +G+ ++VT N +I
Sbjct: 354 EADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMI 413
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + A +++ ++ RG +PN IT++T+I ++ RA +L G++
Sbjct: 414 SIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVK 473
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++++ Y +I K G A RLL
Sbjct: 474 IDEILYQTMIVAYQKAGLVAHAKRLL 499
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS+ R+ +A+ +FN++ + R P + + ++ K + +A+S+ +M+ G+
Sbjct: 449 IHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVGL 508
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD T +++INC G ++ A + +++ +G PN +T+ +I + AL+
Sbjct: 509 SPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIALQAKARNYEAALK 568
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVG 170
+ ++ G + ++V+Y I++ L G
Sbjct: 569 LYRDMQNAGFRPDKVTYSIVMEVLGHCG 596
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 75/143 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++++ P+++ +N+++ + + A+++ +QM+ + PD VT LI+ +
Sbjct: 429 LLEQMVKDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIHA 488
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + VA S+ ++ + G P+T T++ +I L + + A + E++ QG N V
Sbjct: 489 KAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIV 548
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y I+I K AAL+L R
Sbjct: 549 TYNIMIALQAKARNYEAALKLYR 571
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ P+I+ +N ++ K ++Y A+ L M+ G PD VT +I++
Sbjct: 534 LFGEMVDQGCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLG 593
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G + A +V ++ +R + P+ + L+ V++A +++ +L+ G+ N
Sbjct: 594 HCGYLEEAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVP 653
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L++ +V + A LL+
Sbjct: 654 TCNSLLSAFLRVHRLPDAYNLLQ 676
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L + + + +L QM G P++VT N LI+ Y + A +V ++ ++ +P+
Sbjct: 417 LGRAREFGAINNLLEQMVKDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKRCEPD 476
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+T+ TLI + A+ ++ + G+ + +Y ++IN L K G AA RL
Sbjct: 477 RVTYCTLIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLF 535
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M +GI D V+ ILI+ + LG + +F+ LAK++K G PN +T+T ++ C
Sbjct: 258 EMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKG 317
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++ A + GI+L++ + +LI+G +VG +LL
Sbjct: 318 RIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLL 361
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M GI+P+ VT +++ YC G++ AF + ++ G + + F LI G
Sbjct: 293 KMIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVG 352
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
R Q E+ +GI N V+Y ++NGL K G+T+ A
Sbjct: 353 DFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEA 392
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+++ ++ L K + + A+ L +E +G+ +IV N +IN CH G + AF +
Sbjct: 715 VDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDS 774
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ K + IT+ TLI LC ++ A +++ G Q Y L+ K+GQ
Sbjct: 775 LEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQ 834
Query: 172 TRAALRLL 179
A LL
Sbjct: 835 LEKAFELL 842
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F +++ P +N +L K A L + ME + I D T++ +I
Sbjct: 802 DAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVI 861
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL----- 148
NCYC G M A K + P+ + F +I+GLC +++ E+L
Sbjct: 862 NCYCQKGDMEGALEFYYKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQSKNV 921
Query: 149 AQGI-----QLNQVSYGILINGLCKVGQTRAALRLL 179
A+ I +++ S I LC G+ + A+++L
Sbjct: 922 AEMINIVNSRVDTESICDFIAALCDQGRIQEAVKVL 957
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
T ++ ++ +L + + + ++E GI D+V N+LI + ++
Sbjct: 400 TADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYA 459
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + + PN+IT+ T+I G C ++ AL+ D+ I + Y +INGLC
Sbjct: 460 LYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSIS-SYACYNSIINGLC 518
Query: 168 KVGQTRAALRLL 179
K G A+ L
Sbjct: 519 KKGMVEMAIEAL 530
Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P ++ F+ + R P+++ + ++ L K L +ME G+ D+V ++
Sbjct: 181 PELSLWFFDNFMGSR--PNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSV 238
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+ Y + F + +++++G + +++T LI G V+++ F +++ +G
Sbjct: 239 WVCGYVEEKVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEG 298
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
I N+V+Y +++ CK G+ A L
Sbjct: 299 IIPNKVTYTAIMSAYCKKGRIEEAFGLF 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ L ++ S I + ++ L + + A + +M G P N L+
Sbjct: 767 EAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLL 826
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+GQ+ AF +L + K+ K + T +++I C ++ AL+F+ + + I
Sbjct: 827 VATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKDIS 886
Query: 154 LNQVSYGILINGLCKVG---QTRAALR 177
+ + + +I GLC G +TR+ LR
Sbjct: 887 PDFLGFLYMIRGLCTKGRMEETRSVLR 913
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT-KHYSIAISLSHQMEFRGIMPDI 86
S+ NDAV +FN++ + TP+++ +N IL K +S ++ M+ G++PD+
Sbjct: 253 SKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDL 312
Query: 87 VTLNILINCYCHLGQM-SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
T N LI C C G + +V +I G+ P+ +T+ L+ + K ALQ
Sbjct: 313 YTYNTLITC-CRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLK 371
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ + G ++Y LI+ + G A RL
Sbjct: 372 DMESNGFSPTIITYNSLISAHVRGGWLEEASRL 404
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL + V +F+++ P + +N +L K + A+ + ME G P I+T
Sbjct: 326 SLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITY 385
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N LI+ + G + A + +++++G KP+ T+TTL+ G + + A + +DE+ A
Sbjct: 386 NSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKA 445
Query: 150 QGIQLNQVSYGILI 163
G + N ++ LI
Sbjct: 446 AGCKPNICTFNALI 459
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 61/104 (58%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+++ RGI P + TLN +I+ Y +S A +L + + G+ P+ T+ +L+ +D
Sbjct: 652 ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +++ + E+L +G++ ++VSY +I C+ G+ + ALR+
Sbjct: 712 KFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMF 755
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 63/131 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N + + TPS+ +N ++ ++ + + + ++ +G+ PD V+ N +I YC
Sbjct: 684 ILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYC 743
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A + +++ PN +T+ T + + A+ ++ QG + +Q
Sbjct: 744 RNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQN 803
Query: 158 SYGILINGLCK 168
+Y +I+ CK
Sbjct: 804 TYNSIIDWYCK 814
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++T + Y +++ Q++ G +PD VT N L++ + + A V
Sbjct: 310 PDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQV 369
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + G+ P IT+ +LI ++ A + +++ +GI+ + +Y L++G K
Sbjct: 370 LKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEK 429
Query: 169 VGQTRAALRL 178
G+ A +
Sbjct: 430 AGKDEFAFEV 439
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP + N +++ + + S A + + M G P + T N L+ Y + +
Sbjct: 659 TPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEE 718
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+L ++LK+G KP+ +++ T+I C N ++K AL+ E+ + N V+Y +
Sbjct: 719 ILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFV 774
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A+ + + +P+II +N +++ V+ A L QM +GI PD+ T
Sbjct: 363 PKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTT 422
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
L++ + G+ AF V ++ G KPN TF LIK
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIK 460
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ + ++T Y+ A+S+ ++M+ G P +VT N ++N Y G+M +++S +
Sbjct: 241 VYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVY---GKMGMSWSRVT 297
Query: 111 KIL----KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
I G P+ T+ TLI + + D++ + G ++V+Y L++
Sbjct: 298 AIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVF 357
Query: 167 CKVGQTRAALRLLR 180
K + + AL++L+
Sbjct: 358 AKARRPKEALQVLK 371
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT-KHYSIAISLSHQMEFRGIMPDI 86
S+ NDAV +FN++ + TP+++ +N IL K +S ++ M+ G++PD+
Sbjct: 253 SKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDL 312
Query: 87 VTLNILINCYCHLGQM-SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
T N LI C C G + +V +I G+ P+ +T+ L+ + K ALQ
Sbjct: 313 YTYNTLITC-CRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLK 371
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ + G ++Y LI+ + G A RL
Sbjct: 372 DMESNGFSPTIITYNSLISAHVRGGWLEEASRL 404
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL + V +F+++ P + +N +L K + A+ + ME G P I+T
Sbjct: 326 SLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITY 385
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N LI+ + G + A + +++++G KP+ T+TTL+ G + + A + +DE+ A
Sbjct: 386 NSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKA 445
Query: 150 QGIQLNQVSYGILI 163
G + N ++ LI
Sbjct: 446 AGCKPNICTFNALI 459
Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 61/104 (58%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+++ RGI P + TLN +I+ Y +S A +L + + G+ P+ T+ +L+ +D
Sbjct: 652 ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +++ + E+L +G++ ++VSY +I C+ G+ + ALR+
Sbjct: 712 KFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMF 755
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 63/131 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N + + TPS+ +N ++ ++ + + + ++ +G+ PD V+ N +I YC
Sbjct: 684 ILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYC 743
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A + +++ PN +T+ T + + A+ ++ QG + +Q
Sbjct: 744 RNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQN 803
Query: 158 SYGILINGLCK 168
+Y +I+ CK
Sbjct: 804 TYNSIIDWYCK 814
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 63/130 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++T + Y +++ Q++ G +PD VT N L++ + + A V
Sbjct: 310 PDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQV 369
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + G+ P IT+ +LI ++ A + +++ +GI+ + +Y L++G K
Sbjct: 370 LKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEK 429
Query: 169 VGQTRAALRL 178
G+ A +
Sbjct: 430 AGKDEFAFEV 439
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 57/116 (49%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP + N +++ + + S A + + M G P + T N L+ Y + +
Sbjct: 659 TPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEE 718
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+L ++LK+G KP+ +++ T+I C N ++K AL+ E+ + N V+Y +
Sbjct: 719 ILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFV 774
Score = 52.0 bits (123), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A+ + + +P+II +N +++ V+ A L QM +GI PD+ T
Sbjct: 363 PKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTT 422
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
L++ + G+ AF V ++ G KPN TF LIK
Sbjct: 423 LLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIK 460
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ + ++T Y+ A+S+ ++M+ G P +VT N ++N Y G+M +++S +
Sbjct: 241 VYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVY---GKMGMSWSRVT 297
Query: 111 KIL----KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
I G P+ T+ TLI + + D++ + G ++V+Y L++
Sbjct: 298 AIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVF 357
Query: 167 CKVGQTRAALRLLR 180
K + + AL++L+
Sbjct: 358 AKARRPKEALQVLK 371
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 68/133 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+++ + ++ A+ L +M I P++ T N L++ +C G++ A +
Sbjct: 28 SPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKN 87
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
VL ++++ K + + +++L+ G CL ++V +A + + + + SY I+IN C
Sbjct: 88 VLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFC 147
Query: 168 KVGQTRAALRLLR 180
K+ A++L
Sbjct: 148 KMKMVDEAIKLFE 160
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI P++VT LI+ +C +G++ A + K++ PN TF L+ C +++ A
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ + ++ + V+Y L+NG C V + A + +
Sbjct: 86 KNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFK 125
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF +++ P++ FN ++ K A ++ + M + + D+V + L+
Sbjct: 49 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 108
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N YC + ++ A S+ + +R + ++ +I C V A++ +E+ + I
Sbjct: 109 NGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF 168
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI+GLCK G+ A+ L+
Sbjct: 169 PDVVTYHTLIDGLCKSGRLSYAMELV 194
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + + + + +N ++ K K AI L +M + I PD+VT + LI+ C
Sbjct: 123 IFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLC 182
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G++S A ++ ++ RG PN IT+ ++ LC N HD +L+ G L
Sbjct: 183 KSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKN---------HDGVLSSGKSL 230
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 66/131 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N +++ ++ ++ ++ A S+ M R + D+ + NI+IN +C
Sbjct: 88 VLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFC 147
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + A + ++ + P+ +T+ TLI GLC + ++ A++ DE+ +G N +
Sbjct: 148 KMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 207
Query: 158 SYGILINGLCK 168
+Y +++ LCK
Sbjct: 208 TYCPIVDVLCK 218
>Medtr3g053000.1 | PPR containing plant-like protein | HC |
chr3:21005019-21000734 | 20130731
Length = 1200
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +++ PS+I N+++ + K+ A ++E G PD VT ILI C
Sbjct: 276 LISFFVEVNCAPSVIAGNRVVNSMCKSYGVERAGLFLKELESVGFCPDEVTYGILIGWSC 335
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G+M A S L+ + + P T+ LI GL ++ A DE++ +G +
Sbjct: 336 HKGKMKDALSYLSIMSLKSLVPRLCTYNALISGLFKVSMLENAKDILDEMIDRGTAPDIS 395
Query: 158 SYGILINGLCK 168
+Y +L+ G CK
Sbjct: 396 TYRVLVAGYCK 406
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+ME + PD + N LI +C G++ A ++ +LK+ P + ++ LI G C +
Sbjct: 1009 RMEEESLTPDNIDYNYLIKRFCEFGRLKKAVHLMNIMLKKSNIPISTSYDFLIYGFCAQN 1068
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ A F+ E+L + + +L+ C+ G+T A + L
Sbjct: 1069 ELDTASNFYYEMLNLNFKPRIDTVEMLMFSFCEHGRTEQAEQFL 1112
>Medtr2g022860.1 | membrane-associated salt-inducible protein | HC |
chr2:7962191-7960482 | 20130731
Length = 399
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 34 DAVCLFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
D V L++ R+ PS+ +N + L K K + A +L M G P+ V+
Sbjct: 226 DEVGKLLNLMEERYKLYPSLSTYNVRIQSLCKLKRSNEAKALFQGMITSGRKPNSVSYYH 285
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+N +C G + A + A + KRG+K + + TL+ LC D+ + AL E +A+G
Sbjct: 286 LMNGFCREGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDEFEWALDIAKECIAKG 345
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
N + L+NGL V + A L++
Sbjct: 346 WVPNFTTMKKLVNGLVGVSKVDDAKELIK 374
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTL 89
L N + + + + P+++ N ++ K + L + ME R + P + T
Sbjct: 189 LSNSVFSILDEMDRSNVKPNVVTINNAISGFYNEKKFDEVGKLLNLMEERYKLYPSLSTY 248
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N+ I C L + + A ++ ++ G KPN++++ L+ G C ++ A ++
Sbjct: 249 NVRIQSLCKLKRSNEAKALFQGMITSGRKPNSVSYYHLMNGFCREGNLEEAKGLFADMKK 308
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G +++ Y L+ LC+ + AL + +
Sbjct: 309 RGFKVDGQCYFTLVYFLCEGDEFEWALDIAK 339
>Medtr1g085280.1 | ribosomal protein L15 | HC |
chr1:38067122-38065736 | 20130731
Length = 276
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ L Q++ + MPD+V +I Y + GQ A ++L G PN T+T +IK
Sbjct: 129 ALELFGQIKDKNQMPDVVANTAIIEAYANAGQPKEALKAYMRMLASGVCPNAYTYTVIIK 188
Query: 130 GLCLNDQ-VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GL + + +K A ++ E++ +G++ N +YG + GL + A +LL
Sbjct: 189 GLASDAKFLKDAKKYLLEMMEKGMRPNAETYGAVFEGLVTEEKIDEAEKLLE 240
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ L M P+ +N ++ + A++ M G+ P ++ LN L
Sbjct: 543 NDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSL 602
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + + + AF+VL + + G KP+ +T+TTL+K L D+ + ++E++ G
Sbjct: 603 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMVMSGC 662
Query: 153 QLNQVSYGILINGLCKVGQT 172
++ + +L + L V QT
Sbjct: 663 TPDRKARAMLRSALRYVKQT 682
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A++ +M GI PD VT N LI+C+C G+ S A + ++ + GY P +T+ +I
Sbjct: 440 AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMIN 499
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ +R ++ +QG+ N V+Y L++ K G+ A+ L
Sbjct: 500 SMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLE 550
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF + + P +N +L VKT A + +ME G++PD T ++L+
Sbjct: 299 EAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLV 358
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y H G+ A VL ++ +PN+ ++ ++ + +++ Q E+ G+Q
Sbjct: 359 DAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQ 418
Query: 154 LNQVSYGILINGLCK 168
++ Y ++I+ K
Sbjct: 419 PDRHFYNVMIDTFGK 433
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F R+L P + +N ++ K+ +S A L +M+ G P ++T NI+IN
Sbjct: 440 AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMIN 499
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ +L+K+ +G PN +T+TTL+ + + A++ + L + G +
Sbjct: 500 SMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKP 559
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
Y LIN + G + A+ R
Sbjct: 560 TSTMYNALINAYAQRGLSDQAVNAFR 585
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +++IL + + + +M+ G+ PD N++I+ + + A +
Sbjct: 384 PNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMAT 443
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
++L G +P+T+T+ TLI C + + RA + +E+ G ++Y I+IN +
Sbjct: 444 FERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSM 501
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
HSR A LF + Q ++P ++ +N ++ + + + L +M+ +G++P+
Sbjct: 472 HSR-----AEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNA 526
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC---LNDQVKRALQF 143
VT L++ Y G+ + A L + G+KP + + LI L+DQ A +
Sbjct: 527 VTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRM 586
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A+G+ + ++ LIN + + A +L+
Sbjct: 587 ---MAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQ 620
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ L M P+ +N ++ + A++ M G+ P ++ LN L
Sbjct: 543 NDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNSL 602
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + + + AF+VL + + G KP+ +T+TTL+K L D+ + ++E++ G
Sbjct: 603 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMVMSGC 662
Query: 153 QLNQVSYGILINGLCKVGQT 172
++ + +L + L V QT
Sbjct: 663 TPDRKARAMLRSALRYVKQT 682
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A++ +M GI PD VT N LI+C+C G+ S A + ++ + GY P +T+ +I
Sbjct: 440 AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMIN 499
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ +R ++ +QG+ N V+Y L++ K G+ A+ L
Sbjct: 500 SMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLE 550
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF + + P +N +L VKT A + +ME G++PD T ++L+
Sbjct: 299 EAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLV 358
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y H G+ A VL ++ +PN+ ++ ++ + +++ Q E+ G+Q
Sbjct: 359 DAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQ 418
Query: 154 LNQVSYGILINGLCK 168
++ Y ++I+ K
Sbjct: 419 PDRHFYNVMIDTFGK 433
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F R+L P + +N ++ K+ +S A L +M+ G P ++T NI+IN
Sbjct: 440 AMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMIN 499
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ +L+K+ +G PN +T+TTL+ + + A++ + L + G +
Sbjct: 500 SMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKP 559
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
Y LIN + G + A+ R
Sbjct: 560 TSTMYNALINAYAQRGLSDQAVNAFR 585
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ +++IL + + + +M+ G+ PD N++I+ + + A +
Sbjct: 384 PNSFIYSRILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMAT 443
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
++L G +P+T+T+ TLI C + + RA + +E+ G ++Y I+IN +
Sbjct: 444 FERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSM 501
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
HSR A LF + Q ++P ++ +N ++ + + + L +M+ +G++P+
Sbjct: 472 HSR-----AEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNA 526
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC---LNDQVKRALQF 143
VT L++ Y G+ + A L + G+KP + + LI L+DQ A +
Sbjct: 527 VTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRM 586
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A+G+ + ++ LIN + + A +L+
Sbjct: 587 ---MAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQ 620
>Medtr3g023180.1 | PPR containing plant-like protein | HC |
chr3:7000866-7006661 | 20130731
Length = 723
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N+I+ LVKT H +A+S+ + G++ + VT ILI C G++ V
Sbjct: 223 PRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEV 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ ++ KP+ +T L++ + + L+ E+ + + ++YG +I GL K
Sbjct: 283 LGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAK 342
Query: 169 VGQTRAALRLLR 180
G+ L +
Sbjct: 343 GGRVSEGYELFK 354
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIA 70
P FL P ++ ++ + F L +M+ P I + +K + LV+ K +A
Sbjct: 433 PDFLSVKPLLLAYAEAKRMEE----FFMLLEKMKKLGFPVIDDLSKFFSHLVEKKGPEMA 488
Query: 71 ISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
+ + ++ + + + NI + G++ A S+ +I +P++ T+ I
Sbjct: 489 LEIFTHLKEKSYV-SVEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAI-- 545
Query: 131 LCLND--QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
LCL D Q+K A + H++++ + +Y L GLC +G+ A+ L+R
Sbjct: 546 LCLVDHGQIKEACECHNKIIEMSSIPSVAAYNCLAKGLCNIGEIDEAMLLVR 597
>Medtr3g023180.2 | PPR containing plant-like protein | HC |
chr3:7000585-7006661 | 20130731
Length = 723
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N+I+ LVKT H +A+S+ + G++ + VT ILI C G++ V
Sbjct: 223 PRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEV 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ ++ KP+ +T L++ + + L+ E+ + + ++YG +I GL K
Sbjct: 283 LGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAK 342
Query: 169 VGQTRAALRLLR 180
G+ L +
Sbjct: 343 GGRVSEGYELFK 354
Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIA 70
P FL P ++ ++ + F L +M+ P I + +K + LV+ K +A
Sbjct: 433 PDFLSVKPLLLAYAEAKRMEE----FFMLLEKMKKLGFPVIDDLSKFFSHLVEKKGPEMA 488
Query: 71 ISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
+ + ++ + + + NI + G++ A S+ +I +P++ T+ I
Sbjct: 489 LEIFTHLKEKSYV-SVEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAI-- 545
Query: 131 LCLND--QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
LCL D Q+K A + H++++ + +Y L GLC +G+ A+ L+R
Sbjct: 546 LCLVDHGQIKEACECHNKIIEMSSIPSVAAYNCLAKGLCNIGEIDEAMLLVR 597
>Medtr4g060570.1 | PPR containing plant-like protein | HC |
chr4:22286659-22289229 | 20130731
Length = 418
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 37 CLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM----PDIVTLNIL 92
CLF +++ P I N ++ V + H + A+ + HQM G++ P+ +T + L
Sbjct: 234 CLFRQMVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQM---GVVYDCKPNSLTYDYL 290
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G+ A + ++ +G+ P++ ++ +L+ L L V+ A+ + E+ +
Sbjct: 291 IHGLCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQK 350
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++ ++Y +++ +C+ G+ + A+R L+
Sbjct: 351 SVDFITYRTVLDEICRRGRVQEAMRFLQ 378
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSH---------QMEFRGIMPDIVTLNILINCYCHL 99
PSI +N IL ++ Y+ I+L + QM I PDI +LN +I Y
Sbjct: 203 PSIRTYN-ILFGAFLSRGYNTHINLVYMETMRCLFRQMVNEHIEPDIFSLNSMIKGYVLS 261
Query: 100 GQMSVAFSVLAKI-LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
++ A + ++ + KPN++T+ LI GLC + + A + + E+ A+G + S
Sbjct: 262 LHVNDALRIFHQMGVVYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKAKGFVPSSKS 321
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y L+N L VG A+ L
Sbjct: 322 YNSLVNSLALVGDVEEAVNYL 342
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ ND + +L ++ +N +++ + A+ L +QM GI PD+VT N
Sbjct: 440 VKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWN 499
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L++ Y G++ A +++ +I G PN +++T LI G N++ AL+ ++ A+
Sbjct: 500 GLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAE 559
Query: 151 GIQLNQVS 158
++ N +
Sbjct: 560 NVKPNSTT 567
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV LF R+ ++ T +I ++ ++ A L ME RG+ PD +T N LI
Sbjct: 657 AVKLFTRMTKVGITFNIKTHTALIDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIA 716
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+C+ G+M +A ++ ++L+ G PN +T++ I D +A +++DE+
Sbjct: 717 AFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFINAYWKLDMRDQAHKWYDEM 769
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
S P A+ L +L+ P ++ ++ +++ K + A+ L +M GI +I T
Sbjct: 616 ESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKT 675
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI+ ++ A + + KRG P+ IT+ TLI C ++ A D +L
Sbjct: 676 HTALIDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRML 735
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAA 175
+G N V+Y IN K+ A
Sbjct: 736 QEGCSPNVVTYSCFINAYWKLDMRDQA 762
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 81 GIMPDIVTLNILINCYCH----LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND- 135
G P+I I++N YC +S A + I + G PN +T++T IKGLC
Sbjct: 334 GPTPNIHAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 393
Query: 136 ------------QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ A Q +E+ + GI + Y ILI+ CK G + + L
Sbjct: 394 LRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDL 448
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
S++ R N+A+ L + + +N+ + L + A+ L M R +
Sbjct: 576 SIYCRKREF-NEALALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNV 634
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+P +V + LI+C+ A + ++ K G N T T LI N ++ +A
Sbjct: 635 LPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALIDLCIRNCKIDKACD 694
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++ +G+ +Q++Y LI C G+
Sbjct: 695 LFEDMEKRGVHPDQITYNTLIAAFCNTGE 723
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 81 GIMPDIVTLNILINCYCH----LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
G P+I T I++N YC +S A + I + G PN +T++T IKGLC
Sbjct: 159 GPTPNIHTYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGS 218
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + + + +N + ++ GLC+ G+ A ++L
Sbjct: 219 LRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLE 262
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 95 CYC-------HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
CYC L Q + A V + + KRG +P+TI ++ C + AL +E
Sbjct: 535 CYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALALSEEF 594
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G+ LN SY IN LC+ AL+LL
Sbjct: 595 RDHGVSLNPYSYNEFINKLCRESFPEKALQLL 626
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI-------------AISLSHQMEFRGIMP 84
+F + + TP+++ ++ + L K + A + +M+ GI+P
Sbjct: 365 IFGNIYRSGETPNVVTYSTYIKGLCKAGSLRVVWKLICNMCELDEASQVLEEMKSIGILP 424
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+ +ILI+ +C G + + KP+ + T++I LC + + + +
Sbjct: 425 DVYGYSILIDAFCKNGDDKKVVDLREDMKLNQIKPSIVNHTSIIHRLCKSKTMPMQIVMN 484
Query: 145 D--ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A G + +Q Y L++G C+ G +A +LL
Sbjct: 485 KFRAIGASGCKYDQTIYETLVDGFCREGDMVSAGKLLE 522
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
PS + + K + ++ A+ + M+ RGI PD + N +++ YC + + A +
Sbjct: 530 APSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALA 589
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + G N ++ I LC ++ALQ +L + + V+Y LI+
Sbjct: 590 LSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFA 649
Query: 168 KVGQTRAALRLL 179
K ++ A++L
Sbjct: 650 KQTNSKKAVKLF 661
>Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:37501923-37503405 | 20130731
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY--------------- 96
+ F+ IL L K A+ L + M + I PDI+TL +L C+
Sbjct: 48 VMFSTILNCLCKEGKPKEALKLYNVMHSKNISPDIITLILLYACFYKVVLDMYTYTTLIQ 107
Query: 97 --CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ VA S++ ++L+ G KP+ +++ +LI G CL ++ + D + + GI+L
Sbjct: 108 SLCKEGKLQVAKSIIPRMLRLGIKPDIVSYNSLIYGYCLIGEMDAVRKLFDNMHSIGIEL 167
Query: 155 NQVSYGILING 165
+ SY L NG
Sbjct: 168 DLSSYITLFNG 178
>Medtr8g098445.1 | PPR containing plant-like protein | HC |
chr8:41071236-41073243 | 20130731
Length = 430
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+S+P DA +F ++ + P+ + +L L K + A+ L M +G +P+IV
Sbjct: 240 QSMPQDADEIFKKMKETGLIPNAV---AMLDGLCKDGNVQEALKLFGLMREKGTIPEIVI 296
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
++ Y + A + K+ G PN ++T LI+GL +++ A++F E+L
Sbjct: 297 YTAVVEGYTKAHKADDAIRIFRKMQSNGILPNAFSYTVLIQGLYKCSRLQDAVEFCVEML 356
Query: 149 AQGIQLNQVSYGILINGLCK 168
G LN ++ L++G CK
Sbjct: 357 EAGHSLNVTTFVGLVDGFCK 376
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP-DIVTLNILINCYC 97
+ +L+ P+ +N ++ + K A L +M+ G P D+++ N+++N +C
Sbjct: 46 YTTMLKSNVEPNFYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFC 105
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A S + I K G+ N ++T+LI G + + A ++ ++ +GI + V
Sbjct: 106 KTGRLKEALSFVWLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVV 165
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y I+I GL + G+ A ++L
Sbjct: 166 LYAIMIRGLSEEGRVGEAGKMLE 188
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ K + Y A +M GI+PD+V I+I G++ A +L ++
Sbjct: 132 YTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLEEMN 191
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G + + +I+GLC V A + + + G +L+ V++ LINGLCK
Sbjct: 192 QIGLTHDAYCYNVVIQGLCDVGMVVEAKELFNRMEKLGCELSIVTFNALINGLCKAKNLE 251
Query: 174 AALRLL 179
A+ L
Sbjct: 252 EAMNLF 257
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME------FRGIMP--- 84
+A LFNR+ ++ SI+ FN ++ L K K+ A++L ++M+ FR +
Sbjct: 217 EAKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQGS 276
Query: 85 ----DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
D +L + C GQ+ A+ ++ + + I++ LI CL+ + A
Sbjct: 277 CQVSDGASLQKKVKEMCEAGQILKAYKLITDHAGD-LRLDIISYNILINAFCLDREFNAA 335
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+EL +G+ + V+YG +I GL V + A +
Sbjct: 336 YNLFEELQKKGLSPDSVTYGTIIKGLFIVDREDDAFK 372
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PD N ++ + + +A ++ +LK +PN T+ LI G+C +VK A
Sbjct: 18 GVEPDAHMYNTILREMLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGICKRGEVKGA 77
Query: 141 LQFHDELLAQGI-QLNQVSYGILINGLCKVGQTRAALRLL 179
+ DE+ G + +S +++NG CK G+ + AL +
Sbjct: 78 QELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLKEALSFV 117
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + + P II +N +++ + + AI + ME PD+ T N +I+
Sbjct: 320 AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMIS 379
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y G A + K+ G+ P+ +T+ +L+ ++ +E++ G
Sbjct: 380 VYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGK 439
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
++++Y +I+ K G+ ALRL R
Sbjct: 440 DEMTYNTIIHMYGKHGRHDEALRLYR 465
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF +L +P + +N +L K + +S +M G D +T N +I+ Y
Sbjct: 393 LFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYG 452
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ A + + G P+ +T+T LI L +++ A + E+L G++
Sbjct: 453 KHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLH 512
Query: 158 SYGILINGLCKVGQ 171
+Y LI KVG+
Sbjct: 513 TYSALICAYAKVGR 526
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 70/146 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +F+ + R P + +N +++ + A L +++ G PD VT N L+
Sbjct: 354 EAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLL 413
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ G + +++K G+ + +T+ T+I + + AL+ + ++ + G
Sbjct: 414 YAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRN 473
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +LI+ L K + A +++
Sbjct: 474 PDAVTYTVLIDLLGKASKIEEASKVM 499
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N + L K + ++ I DI I YC G+ A+ + +
Sbjct: 406 VAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKAYIIFKE 465
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ ++G+KP+ + + L GLC N V A+ + + +QG++ N ++ I+I G C G+
Sbjct: 466 MEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGK 525
Query: 172 TRAA 175
A
Sbjct: 526 IEEA 529
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ A +F + + P ++ +N + L +H S A+ L + M+ +G+ P+ T I
Sbjct: 456 PDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKI 515
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I +C G++ A + + +T ++ G C D ++++ + EL +G
Sbjct: 516 IIEGFCSEGKIEEAEGYFNSMKDESVE----IYTAMVSGYCEADLIEKSYELFHELSNRG 571
Query: 152 I---------QLNQVSYGILINGLCKVGQTRAALRLL 179
QL++V Y ++ LC+ G + A L
Sbjct: 572 DTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLF 608
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL-NDQVKR 139
GI+P+I N LIN Q+++AF + +I G PN T+ +IK L +K+
Sbjct: 189 GILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQ 248
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
A DE+ G+ N Y I GLC Q+ LLR
Sbjct: 249 ASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLR 289
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ L TP ++ + ++ A L M+ RGI PD++T +L++
Sbjct: 604 ARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLD 663
Query: 95 CYCHLGQMSVAFS---------------VLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+ FS + + R P+ + +T LI G D +
Sbjct: 664 GKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTVLIDGHIKVDNFED 723
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
A++ +E++ +G++ + V+Y L +GL G + A+ L
Sbjct: 724 AIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTL 762
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 19/147 (12%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S + ++K+L L + + A SL RG PD+VT I+I YC + + A +
Sbjct: 584 SKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLF 643
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD-----------------ELLAQGI 152
+ RG KP+ IT+T L+ G + Q + F ++ + +
Sbjct: 644 QDMKSRGIKPDVITYTVLLDG--KSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREV 701
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V Y +LI+G KV A+RL
Sbjct: 702 SPDVVIYTVLIDGHIKVDNFEDAIRLF 728
>Medtr8g102650.1 | PPR containing plant-like protein | HC |
chr8:43222902-43226104 | 20130731
Length = 918
Score = 61.6 bits (148), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P++ N I+ + + K YS AI+L H ++P+IV+ N +IN +C G++ VA
Sbjct: 115 PTVFTCNAIIAAMYRAKRYSDAIALFHFFFNQSNLVPNIVSYNNVINTHCDEGRVDVALE 174
Query: 108 VLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
V I++ + P+++T+ L KGL ++ A E+LA+ + + Y LI+G
Sbjct: 175 VYRHIIEHAPFGPSSVTYRHLTKGLISVGRIDEANDLLVEMLAKNHGADSMVYNNLISGF 234
Query: 167 CKVGQTRAALRLL 179
++G A L
Sbjct: 235 LELGNLDKANELF 247
>Medtr7g027940.1 | PPR containing plant-like protein | HC |
chr7:9372541-9375750 | 20130731
Length = 730
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P + +N ++ K A L +M G ++ T N+LI+ + G + A +
Sbjct: 503 NPDVSSYNYVMEACCKEDLLRPARKLWDEMFASGCCGNLKTYNVLIHKFLEEGLIEEART 562
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ +++ +G +P++ ++T L++G C D+++ A + + + Q I + + G I LC
Sbjct: 563 LFNRMVDKGVEPDSASYTFLLQGFCREDKLEEAFELYSRSVRQDITIARDILGSFILSLC 622
Query: 168 KVGQTRAALRLL 179
K G AA +LL
Sbjct: 623 KKGHMTAASKLL 634
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ S S P A+ FN +++ S+ N + L + + + ++ R
Sbjct: 409 IESVSDIDPVGAIVFFNYVVEKERFLSVSSLNSLSRNLCRVGKVDELLEVFRVLDCRNYF 468
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D+ N++++ C G++ ++VL ++ K+G P+ ++ +++ C D ++ A +
Sbjct: 469 KDVEGYNVMVSWLCEAGRVKEGYAVLQEMKKKGLNPDVSSYNYVMEACCKEDLLRPARKL 528
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
DE+ A G N +Y +LI+ + G A L
Sbjct: 529 WDEMFASGCCGNLKTYNVLIHKFLEEGLIEEARTLF 564
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ IL + + A L + M+ PD+++ N+++N +C +G++ A S
Sbjct: 187 PCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSF 246
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ I G+ N ++++LI + + A ++ ++ QGI + V Y I+I GL K
Sbjct: 247 VWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSK 306
Query: 169 VGQTRAALRLLR 180
G+ A ++L
Sbjct: 307 EGRVGEAAKMLE 318
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F+R+ + P +N IL ++ K +A++L M + P+ T N+LI+
Sbjct: 103 AIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLID 162
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G++ A +L ++ + G P ++ T+++ G C + V A + +++
Sbjct: 163 GFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPP 222
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ +S +++NG CK+G+ AL +
Sbjct: 223 DMISCNVVLNGFCKMGRLEEALSFV 247
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEF--------- 79
R + +A LFN++ ++ PS++ FN ++ L K + A +L ++E
Sbjct: 373 RGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRHSLHLS 432
Query: 80 ----RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
G + D L C GQ+ A+ ++ L KP+ IT+ L+ LC++
Sbjct: 433 LSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITD-LAGEVKPDIITYNILLNALCMDR 491
Query: 136 QVKRALQFHDELLAQGI-QLNQVSYGILINGLCKVGQTRAALRLLR 180
+V A F + L +G + V+YG +I GL V + A ++ +
Sbjct: 492 EVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQ 537
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LFN + + + P +I N +L K A+S ++ G + + + L
Sbjct: 206 DEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSL 265
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + + A + K+ K+G P+ + + +I+GL +V A + +E+ G+
Sbjct: 266 INAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGL 325
Query: 153 QLNQVSYGILINGLCKVG 170
+ Y +I GLC VG
Sbjct: 326 TPDAYCYNAVIQGLCDVG 343
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV-TLNILINCYC 97
+ +L+ P+ +N ++ K A + +M+ GI+P ++ T +IL C C
Sbjct: 142 YTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGC-C 200
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + + + Y P+ I+ ++ G C +++ AL F + G LN+
Sbjct: 201 QANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRN 260
Query: 158 SYGILINGLCKVGQTRAA 175
SY LIN K + R A
Sbjct: 261 SYSSLINAFFKARRYREA 278
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 9/182 (4%)
Query: 2 SVLRYRWFHRNPTFLLAM-PFSSLHS---HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKI 57
L + W +N F L +SSL + +R +A + ++ + P ++ + +
Sbjct: 242 EALSFVWMIKNDGFSLNRNSYSSLINAFFKARRY-REAHAWYTKMFKQGIVPDVVLYAIM 300
Query: 58 LTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGY 117
+ L K A + +M G+ PD N +I C +G ++ A S+ +I +
Sbjct: 301 IRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEH-- 358
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
N T T LI +C V A + +++ G + + V++ LINGLCK A
Sbjct: 359 --NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKN 416
Query: 178 LL 179
L
Sbjct: 417 LF 418
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ FN +L+ K+ A ++M+ G+ PD+VT N L++ YC ++ A+ V
Sbjct: 197 PNLQTFNILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKV 253
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ ++ P+ IT+T++I GL L Q +A E+ G+ + +Y I C
Sbjct: 254 FDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYC 312
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 60/131 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA N + +M P ++ +N ++ K + A + +M + + PD++T +
Sbjct: 213 EDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSV 272
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +GQ A VL ++ + G P+ + I+ C+ ++ A + DE++ +G+
Sbjct: 273 IGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGL 332
Query: 153 QLNQVSYGILI 163
N +Y +
Sbjct: 333 SPNATTYNLFF 343
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN +L L + K + A ++ H ++ P++ T NIL++ + ++ + + + ++
Sbjct: 168 FNALLRTLCQEKSMTDARNVYHSLK-HNFRPNLQTFNILLSGWKNVEDAELFVNEMKEM- 225
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G +P+ +T+ +L+ C ++++A + DE+ + + + ++Y +I GL VGQ
Sbjct: 226 --GVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPD 283
Query: 174 AALRLLR 180
A +L+
Sbjct: 284 KARDVLK 290