Miyakogusa Predicted Gene

Lj0g3v0079629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079629.1 tr|G7I2P1|G7I2P1_MEDTR Phosphoglycolate
phosphatase OS=Medicago truncatula GN=MTR_1g073140 PE=4
SV=1,61.18,2e-19,seg,NULL,CUFF.4337.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073140.1 | haloacid dehalogenase-like hydrolase | HC | ch...    88   4e-18
Medtr1g073140.2 | haloacid dehalogenase-like hydrolase | HC | ch...    87   5e-18

>Medtr1g073140.1 | haloacid dehalogenase-like hydrolase | HC |
           chr1:32433953-32436892 | 20130731
          Length = 239

 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 14/78 (17%)

Query: 67  GVVFDM--------------YRAVLGDDEYRRIKAQSPSGIDNLSHIDRWLQHQQQQAYD 112
           GVVFDM              Y+AVLGDDEY R+KA +P GID L  ID W   QQ+QAYD
Sbjct: 29  GVVFDMDGTLTVPVIDFPSMYKAVLGDDEYLRVKASNPVGIDILKLIDHWSPLQQRQAYD 88

Query: 113 TIADFKRQALLHLQIMPG 130
           TIA F++QAL HLQIMPG
Sbjct: 89  TIAHFEKQALDHLQIMPG 106


>Medtr1g073140.2 | haloacid dehalogenase-like hydrolase | HC |
           chr1:32434125-32436854 | 20130731
          Length = 238

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 14/78 (17%)

Query: 67  GVVFDM--------------YRAVLGDDEYRRIKAQSPSGIDNLSHIDRWLQHQQQQAYD 112
           GVVFDM              Y+AVLGDDEY R+KA +P GID L  ID W   QQ+QAYD
Sbjct: 29  GVVFDMDGTLTVPVIDFPSMYKAVLGDDEYLRVKASNPVGIDILKLIDHWSPLQQRQAYD 88

Query: 113 TIADFKRQALLHLQIMPG 130
           TIA F++QAL HLQIMPG
Sbjct: 89  TIAHFEKQALDHLQIMPG 106