Miyakogusa Predicted Gene

Lj0g3v0079039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079039.1 Non Characterized Hit- tr|I3S4X3|I3S4X3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.1,0,seg,NULL;
26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11 (26S PROTEASOME
REGULATORY SUBUNIT S9),NUL,CUFF.4048.1
         (423 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109300.1 | 26S proteasome non-ATPase regulatory subunit-l...   723   0.0  
Medtr1g009010.2 | 26S proteasome non-ATPase regulatory subunit-l...   704   0.0  
Medtr1g009010.1 | 26S proteasome non-ATPase regulatory subunit-l...   704   0.0  
Medtr7g087530.1 | COP9 signalosome complex subunit 2 | HC | chr7...    80   4e-15

>Medtr3g109300.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | LC | chr3:50533714-50540516 | 20130731
          Length = 671

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/421 (85%), Positives = 373/421 (88%)

Query: 3   SSSYLPATTESVALALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQEN 62
           S+SYLPATT+S+A ALEAKD S AISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQEN
Sbjct: 251 STSYLPATTDSIAQALEAKDTSGAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQEN 310

Query: 63  RGEDLRGLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAEK 122
           RGEDLR LLT LRPFFSLIPKAKTAKIVRGIIDSVAKIPG+SDLQI+LCKEMVQWTRAEK
Sbjct: 311 RGEDLRSLLTSLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEK 370

Query: 123 RTFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSLR 182
           RTFLRQR+EARLAALLMETKEYSEALTLLSGLVK                     HFSLR
Sbjct: 371 RTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLR 430

Query: 183 XXXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNAL 242
                             IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNAL
Sbjct: 431 NLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNAL 490

Query: 243 EDPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLF 302
           EDPKA+FSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADA+SKRSLK F
Sbjct: 491 EDPKAIFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAYSKRSLKFF 550

Query: 303 ETALRDYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIEHVE 362
           ETAL+DYKAQL EDPIVHRH+ SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPI+HVE
Sbjct: 551 ETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVE 610

Query: 363 RKLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 422
           RK+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSLYVRSAKIM
Sbjct: 611 RKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIM 670

Query: 423 A 423
           A
Sbjct: 671 A 671


>Medtr1g009010.2 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr1:1144984-1141945 | 20130731
          Length = 421

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/419 (82%), Positives = 369/419 (88%)

Query: 4   SSYLPATTESVALALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQENR 63
           SS+LPATTES+A ALEAKDPS++ISILYRVL DPSSSP+ALRMKEQAITNLTDLLRQENR
Sbjct: 2   SSFLPATTESIAQALEAKDPSESISILYRVLGDPSSSPDALRMKEQAITNLTDLLRQENR 61

Query: 64  GEDLRGLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAEKR 123
            EDLR LLTQLR FFSLIPKAKTAKIVRGIIDSVAKIPG+S+LQI+LCKEMVQWTR EKR
Sbjct: 62  AEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSELQISLCKEMVQWTRDEKR 121

Query: 124 TFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSLRX 183
           TFLRQR+EARLA LLME+KEYS+ALTLLSGLVK                     HFSL+ 
Sbjct: 122 TFLRQRIEARLATLLMESKEYSQALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLKN 181

Query: 184 XXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 243
                            IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE
Sbjct: 182 LPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 241

Query: 244 DPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFE 303
           DPKAVFSLKYMLLCKIMV+QADDV GIISSKAGLQY+GPDLDAMKAVADAHSKRSLKLFE
Sbjct: 242 DPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFE 301

Query: 304 TALRDYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIEHVER 363
           TALRD+KAQL +DPIVHRHL SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPI+HVER
Sbjct: 302 TALRDFKAQLGDDPIVHRHLTSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 361

Query: 364 KLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 422
           K+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSL+VRSAKIM
Sbjct: 362 KMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLFVRSAKIM 420


>Medtr1g009010.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr1:1145771-1141945 | 20130731
          Length = 421

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/419 (82%), Positives = 369/419 (88%)

Query: 4   SSYLPATTESVALALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQENR 63
           SS+LPATTES+A ALEAKDPS++ISILYRVL DPSSSP+ALRMKEQAITNLTDLLRQENR
Sbjct: 2   SSFLPATTESIAQALEAKDPSESISILYRVLGDPSSSPDALRMKEQAITNLTDLLRQENR 61

Query: 64  GEDLRGLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGSSDLQIALCKEMVQWTRAEKR 123
            EDLR LLTQLR FFSLIPKAKTAKIVRGIIDSVAKIPG+S+LQI+LCKEMVQWTR EKR
Sbjct: 62  AEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSELQISLCKEMVQWTRDEKR 121

Query: 124 TFLRQRVEARLAALLMETKEYSEALTLLSGLVKXXXXXXXXXXXXXXXXXXXXXHFSLRX 183
           TFLRQR+EARLA LLME+KEYS+ALTLLSGLVK                     HFSL+ 
Sbjct: 122 TFLRQRIEARLATLLMESKEYSQALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLKN 181

Query: 184 XXXXXXXXXXXXXXXXXIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 243
                            IYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE
Sbjct: 182 LPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALE 241

Query: 244 DPKAVFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFE 303
           DPKAVFSLKYMLLCKIMV+QADDV GIISSKAGLQY+GPDLDAMKAVADAHSKRSLKLFE
Sbjct: 242 DPKAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYLGPDLDAMKAVADAHSKRSLKLFE 301

Query: 304 TALRDYKAQLEEDPIVHRHLQSLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIEHVER 363
           TALRD+KAQL +DPIVHRHL SLY TL+EQNLCRLIEPFSRVEIAHIAELIELPI+HVER
Sbjct: 302 TALRDFKAQLGDDPIVHRHLTSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDHVER 361

Query: 364 KLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 422
           K+SQMILDKKFAGTLDQGAGCL+IFDDPKTDAIYPATLETISN+GKVVDSL+VRSAKIM
Sbjct: 362 KMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLFVRSAKIM 420


>Medtr7g087530.1 | COP9 signalosome complex subunit 2 | HC |
           chr7:34082872-34089043 | 20130731
          Length = 439

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 205 PAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVFSLKYMLLCKIMVNQA 264
           P   G I    G +H  E+ +  A + FFEAF++++   + + +  LKY++L  +++   
Sbjct: 227 PRIMGIIHECGGKMHMAERQWADAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM--E 284

Query: 265 DDVGGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFETALRDYKAQLEEDPIVHRHLQ 324
            +V      +A      P++ AM  +  A+ +  +  FE  L+  +  + +DP +  +++
Sbjct: 285 SEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIE 344

Query: 325 SLYGTLMEQNLCRLIEPFSRVEIAHIAELIELPIEHVERKLSQMILDKKFAGTLDQ 380
            L   +  Q L +LI+P++R+ I  I++ + +P   VE+ L  +ILD +  G +DQ
Sbjct: 345 DLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEHDVEQLLVSLILDNRIQGHIDQ 400