Miyakogusa Predicted Gene

Lj0g3v0078989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078989.1 tr|G9M037|G9M037_MESVI DEK1-like protein
(Fragment) OS=Mesostigma viride PE=2
SV=1,27.95,0.000000000008,seg,NULL,CUFF.4046.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088520.1 | calpain family cysteine protease | HC | chr8:3...   430   e-121

>Medtr8g088520.1 | calpain family cysteine protease | HC |
           chr8:36702342-36724494 | 20130731
          Length = 2155

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/259 (82%), Positives = 225/259 (86%)

Query: 3   EEGGDHGVLLASAICGTLFSGLAAASFSILWAVNWRPWRIYSWIFARKWPNILHGPQLHL 62
           EEGGD  +LL+SAICG+LFS L  +SFSILWAVNWRPWRIYSWIFARKWPNIL GPQLHL
Sbjct: 2   EEGGDREILLSSAICGSLFSVLGFSSFSILWAVNWRPWRIYSWIFARKWPNILQGPQLHL 61

Query: 63  LCGFLNLSAWFVVVSPIMVLIIWGSWLIVILNRDLIGLAVIMAGTALLLAFYSIMLWWRT 122
           LCGFLNLSAW VVVSPI+VLIIWGSWL+VIL+R LIGLAVIMAGTALLLAFYSIMLWWRT
Sbjct: 62  LCGFLNLSAWSVVVSPIIVLIIWGSWLVVILDRHLIGLAVIMAGTALLLAFYSIMLWWRT 121

Query: 123 QWQSSRXXXXXXXXXXXXXXXXXXXXXXVTTGSRASDRYSPSGFFFGVSAIALAINMLFI 182
           QWQSSR                      VTTGSRASDRYSPSGFFFGVSAIALAINMLFI
Sbjct: 122 QWQSSRAVAILLLLAVALLCAYELCAVYVTTGSRASDRYSPSGFFFGVSAIALAINMLFI 181

Query: 183 CRMIFNGNGLDVDEYVRRAYKFAYSDCIEVGPVACLPEPPDPNELYPRQSRRASHLVLLY 242
           CRM+FNGNGLDVDEYVR AYK AYSD IEVGPVACLPEPP+PNELYPRQSRRASHLVLLY
Sbjct: 182 CRMVFNGNGLDVDEYVRSAYKSAYSDGIEVGPVACLPEPPNPNELYPRQSRRASHLVLLY 241

Query: 243 LGSVFVLVVYSILYGLTAK 261
           LGS+ VL+VYSILYGLTAK
Sbjct: 242 LGSLSVLLVYSILYGLTAK 260