Miyakogusa Predicted Gene
- Lj0g3v0078359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0078359.1 tr|B4D8U4|B4D8U4_9BACT Cytoplasmic membrane
protein (Precursor) OS=Chthoniobacter flavus Ellin428
GN,30.92,0.000000000005,DUF2062,Domain of unknown function DUF2062;
seg,NULL,CUFF.3987.1
(184 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g006190.1 | cytoplasmic membrane protein | HC | chr3:58592... 282 1e-76
Medtr4g030060.1 | cytoplasmic membrane protein | HC | chr4:10370... 231 3e-61
Medtr4g030060.2 | cytoplasmic membrane protein | HC | chr4:10370... 183 8e-47
>Medtr3g006190.1 | cytoplasmic membrane protein | HC |
chr3:585927-581249 | 20130731
Length = 183
Score = 282 bits (722), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/184 (76%), Positives = 153/184 (83%), Gaps = 1/184 (0%)
Query: 1 MAIGKMGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAI 60
MA GKM IT+WF +KITDPL+SI+ RGAEPNQLAFSAALGIT GVFPICGVTVFLC MAI
Sbjct: 1 MANGKMAITNWFQKKITDPLVSILHRGAEPNQLAFSAALGITLGVFPICGVTVFLCGMAI 60
Query: 61 ALLGSYCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASR 120
ALLGSYCHAPT+ML NF+ATPIELSL+VPFLRFGE +SGGPHFPLTSDALKKV TGQAS
Sbjct: 61 ALLGSYCHAPTMMLTNFMATPIELSLIVPFLRFGEFMSGGPHFPLTSDALKKVLTGQASH 120
Query: 121 EVLLSVAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVXXXXXXXXXXXXXEISLK 180
EV+LSV HAL GWL ASPFILG LYIV LP F+ LVQKFS+V E+ LK
Sbjct: 121 EVILSVVHALYGWLAASPFILGALYIVFLPLFRILVQKFSSV-PLSPKKPLLSHSELRLK 179
Query: 181 VRDV 184
VRDV
Sbjct: 180 VRDV 183
>Medtr4g030060.1 | cytoplasmic membrane protein | HC |
chr4:10370995-10367508 | 20130731
Length = 178
Score = 231 bits (589), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Query: 6 MGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGS 65
MG ++WF + TDP L ++R GAEP QL+FSAALGIT GVFPICGVTVFLC +AIA+L S
Sbjct: 1 MGFSNWFRQNFTDPFLLVLRGGAEPKQLSFSAALGITLGVFPICGVTVFLCGIAIAMLES 60
Query: 66 YCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLS 125
+AP ++LAN +ATPIELSL+VPFLRFGE ISG PHF LTSDALKKV TGQAS E+LLS
Sbjct: 61 RINAPIILLANGIATPIELSLIVPFLRFGEFISGSPHFSLTSDALKKVITGQASTELLLS 120
Query: 126 VAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVXXXXXXXXXXXXXEISLKVRDV 184
+A+ALLGWL ASPFIL +LY+ L+PCFK LV K ++ E+ L+VRD+
Sbjct: 121 IANALLGWLAASPFILASLYLTLIPCFKLLVNKLNS-PPSSPKMPLQPRPEVGLRVRDI 178
>Medtr4g030060.2 | cytoplasmic membrane protein | HC |
chr4:10370995-10368286 | 20130731
Length = 140
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 105/125 (84%)
Query: 6 MGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGS 65
MG ++WF + TDP L ++R GAEP QL+FSAALGIT GVFPICGVTVFLC +AIA+L S
Sbjct: 1 MGFSNWFRQNFTDPFLLVLRGGAEPKQLSFSAALGITLGVFPICGVTVFLCGIAIAMLES 60
Query: 66 YCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLS 125
+AP ++LAN +ATPIELSL+VPFLRFGE ISG PHF LTSDALKKV TGQAS E+LLS
Sbjct: 61 RINAPIILLANGIATPIELSLIVPFLRFGEFISGSPHFSLTSDALKKVITGQASTELLLS 120
Query: 126 VAHAL 130
+A+A+
Sbjct: 121 IANAV 125