Miyakogusa Predicted Gene

Lj0g3v0078009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078009.1 Non Characterized Hit- tr|B9RVF0|B9RVF0_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.97,0.0000000000001,seg,NULL,CUFF.3968.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g075040.1 | hypothetical protein | HC | chr5:31876843-3187...   150   1e-36
Medtr7g072540.1 | hypothetical protein | HC | chr7:26977102-2697...    64   8e-11
Medtr5g083970.1 | hypothetical protein | HC | chr5:36239290-3623...    64   8e-11
Medtr4g029130.1 | hypothetical protein | HC | chr4:10044444-1004...    62   5e-10

>Medtr5g075040.1 | hypothetical protein | HC |
           chr5:31876843-31875840 | 20130731
          Length = 195

 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/213 (50%), Positives = 123/213 (57%), Gaps = 31/213 (14%)

Query: 10  MSRPSNFQQK------------KKLDHHEKLTRQLSNFSSSNEAYHGGKSASIPFTWESQ 57
           M++PSNF QK            K +   E+L RQLSN S  NE YHG K ASIPF WESQ
Sbjct: 1   MTKPSNFLQKPSPIIVQRQENKKMMCLDEQLQRQLSNIS--NEDYHGNKFASIPFVWESQ 58

Query: 58  PGTPKVRFQDNYLPPLTPPPSYFQNATKNPITKSKKNPKASFLQTMFSKRSTRKGCXXXX 117
           PGTPK R   N LPPLTPPPSYFQNA K PITK+KKN    FLQ++F KR+T+K C    
Sbjct: 59  PGTPKHRSNQNSLPPLTPPPSYFQNANKKPITKAKKN---FFLQSLFHKRTTKKDCVLDR 115

Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVHSRTSFSVPSSPMVHWRKGEEEED 177
                                                  TS+SVPSSPM+H RKG E ED
Sbjct: 116 SPAASSTFVSYSSSSSSSSLSVSSPRP------------TSYSVPSSPMIHSRKG-ENED 162

Query: 178 LYEVSDSNMSSGGNARSRGRYSSMFKKVLLGDF 210
           LY+V+ S++   GN RSRG YSSMFKKVLLGDF
Sbjct: 163 LYDVTSSSV-CFGNVRSRGSYSSMFKKVLLGDF 194


>Medtr7g072540.1 | hypothetical protein | HC |
           chr7:26977102-26975883 | 20130731
          Length = 226

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)

Query: 47  SASIPFTWESQPGTPKVRFQDNYLPPLTPPPSYFQNATKNPITKSKKNPKASFLQTMFSK 106
           + ++PF WESQPGTPK  F +  LPPLTPPPSY+ +  K PI   KKN +++    +F K
Sbjct: 41  AVTVPFVWESQPGTPKYTFSEKNLPPLTPPPSYY-SCKKTPI---KKNSRSNIFLALFPK 96

Query: 107 RSTRKG 112
            + +K 
Sbjct: 97  LNLKKN 102


>Medtr5g083970.1 | hypothetical protein | HC |
           chr5:36239290-36238412 | 20130731
          Length = 218

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 36  SSSNEAYHGGKSASIPFTWESQPGTPKVRFQDNYLPPLTPPPSYFQNATKNPITKSKKNP 95
           +SS   Y+G +S +IPF WE+QPGTPK    +  +PPLTPPPSY+   +K   T  K+N 
Sbjct: 37  ASSRVMYYGERSVAIPFVWEAQPGTPKHPLSETSIPPLTPPPSYY---SKKSNTNKKRNS 93

Query: 96  KASFLQTMF 104
           K +    + 
Sbjct: 94  KINIFSCIL 102


>Medtr4g029130.1 | hypothetical protein | HC |
           chr4:10044444-10045342 | 20130731
          Length = 190

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 47  SASIPFTWESQPGTPKVRFQDNYLPPLTPPPSY-FQNATKNPITKSKKNPKASFLQTMFS 105
           S ++PF WESQPGTPK  F ++ +PPLTPPPSY F NA K    K  K+ K  +   +F 
Sbjct: 38  SLAVPFVWESQPGTPKHTFSNDTIPPLTPPPSYQFNNANKKIEKKHSKSSK--YFLALFQ 95

Query: 106 KRSTRK 111
           K + RK
Sbjct: 96  KLNFRK 101