Miyakogusa Predicted Gene
- Lj0g3v0077939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0077939.1 tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter
(Fragment) OS=Oryza sativa subsp. japonica GN=mrp1
P,71.67,2e-19,ABC_TM1F,ABC transporter, integral membrane type 1;
PREDICTED: SIMILAR TO ATP-BINDING CASSETTE C5 SP,CUFF.3964.1
(72 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g011820.1 | multidrug resistance protein ABC transporter f... 114 2e-26
Medtr3g011840.1 | multidrug resistance protein ABC transporter f... 112 5e-26
Medtr2g019020.4 | multidrug resistance protein ABC transporter f... 104 2e-23
Medtr2g019020.5 | multidrug resistance protein ABC transporter f... 103 3e-23
Medtr2g019020.2 | multidrug resistance protein ABC transporter f... 103 3e-23
Medtr2g019020.6 | multidrug resistance protein ABC transporter f... 103 3e-23
Medtr2g019020.1 | multidrug resistance protein ABC transporter f... 103 3e-23
Medtr2g019020.3 | multidrug resistance protein ABC transporter f... 103 3e-23
Medtr1g099280.1 | ABC transporter-like family-protein | HC | chr... 49 9e-07
Medtr1g099280.4 | ABC transporter-like family-protein | HC | chr... 49 9e-07
Medtr1g099280.2 | ABC transporter-like family-protein | HC | chr... 49 9e-07
Medtr1g099280.3 | ABC transporter-like family-protein | HC | chr... 49 9e-07
>Medtr3g011820.1 | multidrug resistance protein ABC transporter
family protein | HC | chr3:3016723-3005103 | 20130731
Length = 1651
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 57/60 (95%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL+QTDKRVGLMNEIL+AMDTVKCYAWETSFQSRIQ+IR ELSWFRKAQL+YA N
Sbjct: 505 LTKEGLQQTDKRVGLMNEILSAMDTVKCYAWETSFQSRIQTIRHNELSWFRKAQLLYALN 564
>Medtr3g011840.1 | multidrug resistance protein ABC transporter
family protein | HC | chr3:3044636-3027773 | 20130731
Length = 1465
Score = 112 bits (281), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/60 (86%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
L+KEGL+QTDKRVGLMNEIL+ MDTVKCYAWETSFQSRIQSIR EELSWFRKA L+YA N
Sbjct: 389 LTKEGLQQTDKRVGLMNEILSTMDTVKCYAWETSFQSRIQSIRHEELSWFRKAYLLYALN 448
>Medtr2g019020.4 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6109726-6098667 | 20130731
Length = 1164
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 12 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 71
>Medtr2g019020.5 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6117368-6099721 | 20130731
Length = 1459
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 467 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 526
>Medtr2g019020.2 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6113473-6098667 | 20130731
Length = 1382
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 230 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 289
>Medtr2g019020.6 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6114408-6098667 | 20130731
Length = 1436
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 284 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 343
>Medtr2g019020.1 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6117368-6098667 | 20130731
Length = 1619
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 467 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 526
>Medtr2g019020.3 | multidrug resistance protein ABC transporter
family protein | HC | chr2:6117368-6098667 | 20130731
Length = 1619
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 56/60 (93%)
Query: 2 LSKEGLKQTDKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
LSKEGL++TDKR+GLMNEILAAMDTVKCYAWE+SFQSR+ ++R++ELSWFRKA L+ A N
Sbjct: 467 LSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSRVVNVRNDELSWFRKASLLGACN 526
>Medtr1g099280.1 | ABC transporter-like family-protein | HC |
chr1:44809048-44816157 | 20130731
Length = 1501
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
D+R+ +E L M +K YAWETSF++ I+ +R+EEL W QL A N
Sbjct: 504 DERLKATSEALVNMKVLKLYAWETSFKNSIEGLRNEELKWVSAVQLRRAYN 554
>Medtr1g099280.4 | ABC transporter-like family-protein | HC |
chr1:44809031-44816334 | 20130731
Length = 1316
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
D+R+ +E L M +K YAWETSF++ I+ +R+EEL W QL A N
Sbjct: 479 DERLKATSEALVNMKVLKLYAWETSFKNSIEGLRNEELKWVSAVQLRRAYN 529
>Medtr1g099280.2 | ABC transporter-like family-protein | HC |
chr1:44809048-44815945 | 20130731
Length = 1476
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
D+R+ +E L M +K YAWETSF++ I+ +R+EEL W QL A N
Sbjct: 479 DERLKATSEALVNMKVLKLYAWETSFKNSIEGLRNEELKWVSAVQLRRAYN 529
>Medtr1g099280.3 | ABC transporter-like family-protein | HC |
chr1:44808963-44816396 | 20130731
Length = 1476
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 11 DKRVGLMNEILAAMDTVKCYAWETSFQSRIQSIRDEELSWFRKAQLVYAEN 61
D+R+ +E L M +K YAWETSF++ I+ +R+EEL W QL A N
Sbjct: 479 DERLKATSEALVNMKVLKLYAWETSFKNSIEGLRNEELKWVSAVQLRRAYN 529