Miyakogusa Predicted Gene
- Lj0g3v0077609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0077609.1 Non Characterized Hit- tr|F6I6N4|F6I6N4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.5,7e-19,PPR_2,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopepti,CUFF.3938.1
(127 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 160 4e-40
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 93 5e-20
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 6e-19
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 5e-18
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-17
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 84 3e-17
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 3e-17
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 84 4e-17
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 6e-17
Medtr4g113830.1 | organelle transcript processing protein, putat... 83 8e-17
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 1e-16
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 82 1e-16
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 82 2e-16
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 80 3e-16
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-16
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 80 4e-16
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 80 4e-16
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 80 5e-16
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 5e-16
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 6e-16
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 80 6e-16
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 79 1e-15
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 79 1e-15
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 79 1e-15
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 2e-15
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 78 2e-15
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 78 2e-15
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-15
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-15
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 78 2e-15
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 78 2e-15
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 78 2e-15
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 78 2e-15
Medtr3g117150.1 | organelle transcript processing protein, putat... 78 3e-15
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-15
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-15
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 5e-15
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 5e-15
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 76 6e-15
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 7e-15
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 76 7e-15
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 8e-15
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 76 9e-15
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 76 1e-14
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 76 1e-14
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 75 1e-14
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 75 1e-14
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-14
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 75 1e-14
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 75 2e-14
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 75 2e-14
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 75 2e-14
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 75 2e-14
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 75 2e-14
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-14
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 3e-14
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 74 3e-14
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 74 3e-14
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 74 3e-14
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 3e-14
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 3e-14
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 74 3e-14
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 74 4e-14
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 4e-14
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 74 4e-14
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 74 4e-14
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 4e-14
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 74 4e-14
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 74 4e-14
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 74 4e-14
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 74 4e-14
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-14
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 6e-14
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 73 6e-14
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 73 6e-14
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 72 9e-14
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-13
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 72 1e-13
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-13
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-13
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 72 2e-13
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-13
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 71 2e-13
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-13
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 71 2e-13
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 3e-13
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 71 3e-13
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 70 3e-13
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 70 3e-13
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 70 4e-13
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 70 4e-13
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 70 5e-13
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 5e-13
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 5e-13
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 5e-13
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 70 7e-13
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 70 7e-13
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 70 7e-13
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 69 7e-13
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 69 7e-13
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 69 8e-13
Medtr3g052720.1 | organelle transcript processing protein, putat... 69 8e-13
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 69 8e-13
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 69 1e-12
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-12
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-12
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 69 1e-12
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 69 1e-12
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 69 1e-12
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-12
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 69 1e-12
Medtr1g059720.1 | organelle transcript processing protein, putat... 69 2e-12
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 68 2e-12
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-12
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 68 2e-12
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 68 2e-12
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 68 2e-12
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 68 2e-12
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 68 2e-12
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 68 2e-12
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 68 2e-12
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 68 2e-12
Medtr5g006420.1 | organelle transcript processing protein, putat... 68 2e-12
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 68 2e-12
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 68 2e-12
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 2e-12
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-12
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-12
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-12
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 67 3e-12
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 67 3e-12
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-12
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-12
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 67 4e-12
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 67 4e-12
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 67 4e-12
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 67 4e-12
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-12
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-12
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 67 5e-12
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-12
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-12
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-12
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 67 5e-12
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 67 6e-12
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 6e-12
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 67 6e-12
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 66 6e-12
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 6e-12
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 66 7e-12
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 66 7e-12
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 66 7e-12
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 66 7e-12
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 66 8e-12
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 66 8e-12
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 8e-12
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 8e-12
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 66 9e-12
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 66 9e-12
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 66 1e-11
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 66 1e-11
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-11
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-11
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-11
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 65 1e-11
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 65 1e-11
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 65 1e-11
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 65 1e-11
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 65 1e-11
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 65 1e-11
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 65 1e-11
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 2e-11
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 65 2e-11
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 65 2e-11
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 65 2e-11
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 65 2e-11
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 64 2e-11
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-11
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 64 3e-11
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-11
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-11
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-11
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-11
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 64 4e-11
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 64 4e-11
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 64 5e-11
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 63 6e-11
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-11
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 63 7e-11
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 63 7e-11
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 7e-11
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 63 8e-11
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 63 8e-11
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 63 8e-11
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 63 9e-11
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-10
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 62 1e-10
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 62 2e-10
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 62 2e-10
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 2e-10
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 62 2e-10
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 62 2e-10
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 61 2e-10
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 61 3e-10
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 61 3e-10
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 3e-10
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 61 3e-10
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-10
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 60 4e-10
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-10
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 5e-10
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 60 5e-10
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 60 6e-10
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 6e-10
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 60 6e-10
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 60 6e-10
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 60 6e-10
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 9e-10
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 59 1e-09
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 59 2e-09
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 59 2e-09
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 59 2e-09
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 2e-09
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 58 3e-09
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 3e-09
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 57 3e-09
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 4e-09
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 5e-09
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 57 5e-09
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 8e-09
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 9e-09
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 56 9e-09
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 56 9e-09
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 56 1e-08
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 56 1e-08
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 54 2e-08
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 54 3e-08
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-08
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 54 4e-08
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 54 4e-08
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 5e-08
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 53 7e-08
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 53 8e-08
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 52 1e-07
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 51 2e-07
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-07
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 51 2e-07
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 3e-07
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 3e-07
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 50 5e-07
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 50 6e-07
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 50 7e-07
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 50 7e-07
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 49 8e-07
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 49 1e-06
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 49 1e-06
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 49 2e-06
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 48 2e-06
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 48 3e-06
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 46 8e-06
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 46 8e-06
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 160 bits (404), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 98/124 (79%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ AS +T L LL AAGD G+FV+GKSLHGYCI+IG +LNV+TALIDMY KTG ++
Sbjct: 205 SGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYL 264
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
RK+FD +V+KDVVLWNCLI NYAR+ LV EA+ LLQ MR +G+K NSST VGLLS A
Sbjct: 265 ARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSA 324
Query: 124 SESI 127
S S+
Sbjct: 325 SGSM 328
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
TAL+D+Y K G + +IF+ + +KDV W +I + +G A+ L +M +G +
Sbjct: 351 TALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFR 410
Query: 109 TNSSTFVGLLSAC 121
N TF+ +L+AC
Sbjct: 411 PNEITFLAILTAC 423
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 93.2 bits (230), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ + T+ LLPA G G+ G+ +HG+ + G +++ + +ALIDMY K G +
Sbjct: 281 SGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKD 340
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R +FD + K+V WN +I + + G+V AL L KM+ +G++ N TF +LSAC
Sbjct: 341 ARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSH 400
Query: 124 SESI 127
S S+
Sbjct: 401 SGSV 404
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GLI + T I++ + GK +HG ++GL + + + LIDMY K G V +
Sbjct: 111 GLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYA 170
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++FD + ++DV W +I + G + EAL L ++M+++G + N T+ +++
Sbjct: 171 CRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIA 225
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 69/121 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A + T++ +LPA D +G+S+HGY +++G S +NV TAL+DMY K G
Sbjct: 227 MQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGE 286
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V GR +F + K+VV WN +I A+NG EA KM + ++ + + +G L A
Sbjct: 287 VETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHA 346
Query: 121 C 121
C
Sbjct: 347 C 347
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A + G+ GK +H Q+ LSS+++V+ +LI MY K V +FD+L K
Sbjct: 344 LHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN 403
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V WN +I YA+NG V EAL L M+ QG+K +S TFV +++A
Sbjct: 404 VTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITA 447
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T + ++ A D K +HG I+ + +++ V TAL+DMY K G
Sbjct: 429 MQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGA 488
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLS 119
+ R++FD + ++ V+ WN +I Y +GL AL L M+ + +K N TF+ ++S
Sbjct: 489 IETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVIS 548
Query: 120 ACPAS 124
AC S
Sbjct: 549 ACSHS 553
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL G+ + G +HG I+ G S+L +T+++++Y K + K+F + ++D
Sbjct: 141 LLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERD 200
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+V WN ++ YA+NG +AL L+ M+ G K +S T V +L A
Sbjct: 201 LVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPA 245
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 72/121 (59%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + T+ +LP G+ G F +G +HGY +++G+ S + + +LIDMY K+G
Sbjct: 329 MINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGS 388
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
IF+ + D+++V WN ++ N+A+N A+ LL++M+ G N+ TF +L A
Sbjct: 389 SRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPA 448
Query: 121 C 121
C
Sbjct: 449 C 449
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +LP D+ N V+ + +HGY ++GLS H+ V AL+D+Y K G +K+FD +
Sbjct: 239 TVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEM 298
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+++ V WN +I ++ GL +AL + M GM+ N T +L
Sbjct: 299 DERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSML 345
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +LPA G VGK +H IQ G ++ L + AL DMY K G + R +F+
Sbjct: 441 TFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFNVS 500
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ KD V +N LI Y++ E+L L +MR+ GM + +F+G++SAC SI
Sbjct: 501 I-KDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSI 555
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + + ++ A + GK +HG+ ++ +HL +L+D+Y K G
Sbjct: 530 MRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGR 589
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLS 119
+ K+FD + KDV WN +I Y G A+ L + M+ G++ +S +++ +LS
Sbjct: 590 IDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLS 649
Query: 120 AC 121
AC
Sbjct: 650 AC 651
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ T +L A D F G+ +HG ++G + V L+ Y G
Sbjct: 125 MVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGF 184
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG--MKTNSSTFVGLL 118
+FD + ++D V WN +IG + G E+L ++M + ++ + T V +L
Sbjct: 185 FVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVL 244
Query: 119 SACPASESI 127
C SE++
Sbjct: 245 PVCADSENV 253
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ T++ LLPA G HGY + G ++ ++ A+IDMY K G +
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R+IFD + ++D++ WN +I Y +GL EAL L Q+++ G+K + T + +LSAC
Sbjct: 467 SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH 526
Query: 124 S 124
S
Sbjct: 527 S 527
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ ++ST++ +LP G GK++H Y I+ ++ + TAL+DMY K L
Sbjct: 201 MQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL 260
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLS 119
+ + RKIF+++ K+ V W+ +IG Y + + +AL L M I G+ +T +L
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLR 320
Query: 120 AC 121
AC
Sbjct: 321 AC 322
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T LL A +G+ +H + +GLS L V TAL+ MY K G ++
Sbjct: 102 GVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQA 161
Query: 65 RKIFDSL--VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ +F+S+ D+D+V WN +I ++ + L + ++ + +M+ G+ NSST V +L
Sbjct: 162 QTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+C GL + +T+ +L A + GK LH + I+ G+ V +LI MY K G+
Sbjct: 303 LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGI 362
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ D ++ KD V ++ +I +NG +AL + ++M+ G+ T + LL A
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPA 422
Query: 121 C 121
C
Sbjct: 423 C 423
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T L ++ + R +FD + VVLWN +I YA +G +++YL M G+
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 109 TNSSTFVGLLSACPASESI 127
+ TF LL AC + +++
Sbjct: 105 PTNFTFPFLLKACSSLQAL 123
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
W ++ ++ T+ LL A N V+GK LH ++ GL ++ +L+DMY K GL+
Sbjct: 335 WYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDD-TSLRNSLVDMYAKCGLIP 393
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + VDKDVV WN +I YA++G EAL L +MR++ ++ T VG+LSAC
Sbjct: 394 DAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSAC 452
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTG 59
M + A TV+ +L A G +G SLHG+ ++ GL SS + V TAL++ Y K G
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCG 492
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
R +FD + +K+ V W +IG G +L L + M + + N F LL+
Sbjct: 493 DATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLA 552
Query: 120 ACPAS 124
AC S
Sbjct: 553 ACSHS 557
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
ILL A + V+ LH ++ + VLT+L+D Y K G + RK+FD + D+
Sbjct: 140 ILLKTASQLRDIVLTTKLHCNILKSNAADSF-VLTSLVDAYSKCGKLRDARKVFDEIPDR 198
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W +I Y +N E L L +MR + N T L++AC
Sbjct: 199 SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTAC 245
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV L+ A G GK +HGY I+ G+ + + T+L++MYVK G + R +FD
Sbjct: 237 TVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEF 296
Query: 72 V------DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
D+V W +I Y + G AL L + + NS T LLSAC E
Sbjct: 297 SVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLE 356
Query: 126 SI 127
+I
Sbjct: 357 NI 358
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G +++T+ LLPA GK +HGY + IG+ L V +AL+DMY K G +
Sbjct: 298 GFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEA 357
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLSAC 121
R +F + +K+ V N +I YA +G EA+ L +M ++G+ K + TF L+AC
Sbjct: 358 RTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTAC 415
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G G+ + G+ +H ++ V +ALI MY K G V RK+FD +V KD
Sbjct: 138 VLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKD 197
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+V N ++ YA+ GL EAL L++ M++ G+ N T+ L+S
Sbjct: 198 LVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALIS 241
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+ +T++++L A G+ LH Y + G +L + TAL+DMY K G + R++
Sbjct: 514 PNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREV 573
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
FDS+++KDV+ WN +I Y NG A+ + M +K N TF+ LLSAC
Sbjct: 574 FDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSAC 627
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + G+ + + ++ + + G G +G+S+H I+ + ++V +LI+MY K
Sbjct: 407 MQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDK 466
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ +IF+ ++DV+LWN LI + EA+ L M ++ N++T V +LSA
Sbjct: 467 MNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSA 525
Query: 121 C 121
C
Sbjct: 526 C 526
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A G+ G+ V G+ LHG ++ G+ L++ ++++ MY K G+ + F +++KD++
Sbjct: 224 ACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLS 283
Query: 79 WNCLIGNYARNGLVGEALYLLQKM 102
W +I YAR G++ + + +M
Sbjct: 284 WTSMIRVYARFGMMSDCVRFFWEM 307
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 82.8 bits (203), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG + T +L + + F++G+ +H I++ H+ V ++L+DMY K G
Sbjct: 132 MLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGK 191
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+H R +F+ L ++DVV +I YA+ GL EAL L ++++ +GMK+N T+ G+L+A
Sbjct: 192 IHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTA 251
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK +H + ++ + S + + +LIDMY K G + + R+IFD++ ++ V+ WN ++ Y+
Sbjct: 260 LGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 319
Query: 88 RNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
++G E L L MR + +K +S T + +LS C
Sbjct: 320 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGC 354
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F G+ +H + I+ + + T LI +Y K + +FD + +++VV W +I
Sbjct: 56 FREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISA 115
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
Y++ G +AL L +M G + N TF +L++C +S
Sbjct: 116 YSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSS 154
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ + ST++++L A G T + +GK + + G S+L + ALIDMY K G
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R++FD + +KDV+ WN +IG Y+ L EAL L + M +K N TF+G+L A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373
Query: 121 C 121
C
Sbjct: 374 C 374
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTG 59
M S + + T L +L A G +GK +H Y + + SS+ ++ T+LIDMY K G
Sbjct: 355 MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG 414
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLL 118
+ ++F S+ +++ WN ++ +A +G AL L +M +G+ + + TFVG+L
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474
Query: 119 SAC 121
SAC
Sbjct: 475 SAC 477
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
TALI YV G + R++FD + KDVV WN +I Y ++G EA+ +M+ +
Sbjct: 200 FTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
Query: 108 KTNSSTFVGLLSACPASES 126
N ST V +LSAC + S
Sbjct: 260 LPNKSTMVVVLSACGHTRS 278
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +GL A + T++ +LPA D + +GKS+HGY +++G S ++V+ AL+ MY + G
Sbjct: 210 MQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGC 269
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R +F+ +++K V WN +I YA+ G EA KM +G++ + L+A
Sbjct: 270 ERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTA 329
Query: 121 C 121
C
Sbjct: 330 C 330
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ ++ A D + K +HG I+ + + + V TALIDMY K G RK+FD +
Sbjct: 423 TLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMM 482
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
++ V+ WN +I Y +GL EA+ + M+ + + N +TF+ ++SAC S
Sbjct: 483 HERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHS 535
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + ++ L A D G+ G+ +H +Q L + V+ +L+ MY K
Sbjct: 311 MLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKR 370
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V IF++L K V WN +I YA+NG V EALYL M+ Q +K + T V +++A
Sbjct: 371 VDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITA 430
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL G G+ +HG I G L + ++ YVK G + K+F+ L +KD
Sbjct: 124 LLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKD 183
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+V W LI YA+NG AL L +M+ G+K +S T V +L A
Sbjct: 184 LVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPA 228
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ L G I +GL S + T+L+D Y K GLV GRK+FD ++ D V WN ++ YA
Sbjct: 445 LGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYA 504
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L +M G++ ++ TF G+LSAC
Sbjct: 505 TNGYGIEALTLFNEMGYSGVRPSAITFTGILSAC 538
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
L+AL+ Y G + RK+FD+ VD VLWN +I Y NG EAL L KMR G+
Sbjct: 232 LSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGV 291
Query: 108 KTNSSTFVGLLS 119
+ S +LS
Sbjct: 292 WGDFSAVANILS 303
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC SG++A+ +T++ +L + G+ +GK H Y ++ + A+IDMY K G
Sbjct: 358 MCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGA 417
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F + +K+ V WN +IG A +G EA+ + +KM+ G+ + TF GLLSA
Sbjct: 418 LQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSA 477
Query: 121 CPAS 124
C S
Sbjct: 478 CSHS 481
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 68/119 (57%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ + T+ +L A + +G +H ++G+ SH V A++++YV GL
Sbjct: 125 MVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGL 184
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R++FD + ++ +V WN +I Y++ G EA+ + ++M+ G++ + T VGLLS
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLS 243
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T++ LL + GNF +G+ +H + + G+ V AL+DMY K G +
Sbjct: 230 GLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCA 289
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ +FD ++DKDVV W C+I YA +GL+ AL +M
Sbjct: 290 KSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQM 327
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + +T++ ++ ++ D G+ +HG+ + G S+ V TALIDMY K G
Sbjct: 240 MAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGS 299
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F+ L +K VV WN +I YA +GL AL L KMR + + + TFVG+L+A
Sbjct: 300 VKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAA 358
Query: 121 C 121
C
Sbjct: 359 C 359
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T+ +L A G+S+H Y I+ G L V ALIDMY K G V
Sbjct: 143 GLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDA 202
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++FD +V +D VLWN ++ YA+NG E++ L ++M G++ +T V ++S+
Sbjct: 203 GRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL + D+ GK LH +G++ + ++ T L+ +Y + + R +FD + ++
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQN 112
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ LWN LI YA NG A+ L KM G++ ++ T +L AC A +I
Sbjct: 113 LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 80.5 bits (197), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+C + ++ T+L L+ +G LHG C + G + L+V + + MYVK G
Sbjct: 152 LCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGE 211
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLS 119
V +GRK+FD ++ KD++ WN +I YA+NG L + ++MR + G+ + T +G+L
Sbjct: 212 VEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLC 271
Query: 120 AC 121
+C
Sbjct: 272 SC 273
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L +L + + G +G+ + + G S+ ++ ALI+MY + G + R++FD +
Sbjct: 265 TLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCM 324
Query: 72 VD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ K VV W +IG Y +G A+ L M G+K + + FV +LSAC
Sbjct: 325 DERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSAC 376
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + T +LL + G LH + ++ G ++LI+MY KT L
Sbjct: 50 MLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSL 109
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLS 119
RK+FD + +N +I Y N ++ EA+ L ++M + NS T +GL+S
Sbjct: 110 PCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVS 169
Query: 120 ACPASESI 127
E +
Sbjct: 170 GILVPEKL 177
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG +++ +L A G+ G+ +G+ + G+ ++ G+ + + +ALI MY K G +
Sbjct: 213 SGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVS 272
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R+IFD + +D + WN I YA+NG+ EA+ L M+ G+ N T +LSAC
Sbjct: 273 SRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSAC 330
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + T+ +L A G +GK + Y GL + V TALIDMY K G
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGS 370
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG--MKTNSSTFVGLL 118
+ +++F+ + K+ WN +I A +G EAL L ++M +G + N TFV LL
Sbjct: 371 LESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLL 430
Query: 119 SAC 121
SAC
Sbjct: 431 SAC 433
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
H ++GL + + + +++ MY + G RK+FD + +KD+V WN L+ YA+ G
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199
Query: 93 GEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
EA+ + ++R + G + + + V +L AC
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGAC 229
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ + G I +GL S + T+L+D Y K G+V GRK+FD ++ D V WN ++ YA
Sbjct: 402 LGEQVFGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYA 461
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L +M G++ ++ TF G+LSAC
Sbjct: 462 TNGYGIEALTLFNEMEYSGVRPSAITFNGVLSAC 495
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
L+AL+ Y G + R++FD+ VD VLWN +I Y NG EAL L +MR G+
Sbjct: 200 LSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRSGV 259
Query: 108 KTNSSTFVGLLSA 120
+ +LSA
Sbjct: 260 RGEFPAVANILSA 272
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 20/147 (13%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ V +L AA NF + K +H + +IG + + V + L+D Y K
Sbjct: 254 MRRSGVRGEFPAVANILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQH 313
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQ-------------------- 100
H ++FD L D +L N +I Y G + +A + Q
Sbjct: 314 SHEACELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILALDTFS 373
Query: 101 KMRIQGMKTNSSTFVGLLSACPASESI 127
+M + +K + +F ++SAC S+
Sbjct: 374 RMNMLDVKMDKFSFASVISACAIKSSL 400
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW-G 64
++ S+ T+ +LP +GN GKS+HGY I+ G AL+ MY K GLV
Sbjct: 142 VMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDA 201
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+FDS++ KDVV WN +I A NGL+ EA L M +K N +T +L C +
Sbjct: 202 YAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCAS 260
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ T++ L+P + + + HGY I+ L++ L+D Y K G++ +
Sbjct: 586 QGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFED-LHLKGTLLDAYAKCGIIGY 644
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KIF S VDKD+V++ +IG YA +G+ +AL M G+K + F +LSAC
Sbjct: 645 AYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSAC 702
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 35/133 (26%)
Query: 30 KSLHGYCIQIG---LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK------------ 74
K +HGY I+ G ++ V A++D Y K G + + K+F +L +K
Sbjct: 476 KEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG 535
Query: 75 --------------------DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
D+ WN ++ YA N +AL L K++ QGMK + T
Sbjct: 536 YVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTI 595
Query: 115 VGLLSACPASESI 127
+ L+ C S+
Sbjct: 596 MSLIPVCTQMASV 608
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 11 STVLILLPAAGDTGNFVV---GKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTGLVHWGRK 66
+TV +LP + G+ +H Y +Q LS+ ++V AL+ Y+K G
Sbjct: 249 ATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAES 308
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
+F ++ +D+V WN +I YA NG ++L++ + ++ + +S T V +L AC
Sbjct: 309 LFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPAC 364
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK LH Y ++ G S AL++MY K G++ K+FD D V+WN ++ Y+
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 88 RNGL-VGEALYLLQKMRIQGMKTNSS-TFVGLLSACPAS 124
R+G + + + + M G SS T +L C S
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARS 159
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 71/114 (62%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+ T+ ++ + + G+++HG I +G+ S++ V +AL+DMY K G+ R I
Sbjct: 328 PDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVI 387
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F+++ K+V++WN +I YA+NG EAL L ++M + K ++ +FVG+LSAC
Sbjct: 388 FETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSAC 441
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + + + L A +F +GK +HG + ++ V A+ D+Y K G
Sbjct: 154 MQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGD 213
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD +V+K++V WN +I Y + G E + KM++ G+K + T +L+A
Sbjct: 214 IDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNA 273
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
AL+ Y K GLV +FD + +D V +N +I +A N L G+AL +M+ G +
Sbjct: 101 NALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFR 160
Query: 109 TNSSTFVGLLSAC 121
++V L AC
Sbjct: 161 PTQYSYVNALQAC 173
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 40 GLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLL 99
GL ++++++ Y ++G V R +FD + KD + W +I YA++G +AL L
Sbjct: 259 GLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLF 318
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
+M ++ +S T ++S+C
Sbjct: 319 SEMLRGNVRPDSHTISTVVSSC 340
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ V+ +LP G G + G+ +HG+C++ GL + V AL+DMY K G +
Sbjct: 110 GILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDA 169
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
K+F+ + KDVV WN ++ Y++NG +AL L KMR + ++++ T+ ++S
Sbjct: 170 NKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVIS 224
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLN-------VLTALID 53
MC + T++ LL A G + GK H Y ++ L N V+ ALID
Sbjct: 242 MCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALID 301
Query: 54 MYVKTGLVHWGRKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
MY K + R +FD + D+DVV W +IG YA++G AL L +M
Sbjct: 302 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEM 352
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 29 GKSLHGYCIQIGL--SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
GK +H Y ++ L S L V LIDMY K+G V + +FDS+ ++ V W L+ Y
Sbjct: 382 GKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 441
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+G +A + +MR + + + TF+ +L AC S
Sbjct: 442 GMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHS 479
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + A G+ NF +G S+HG I++G S++ V A+I MY K V RK+FD L
Sbjct: 12 TFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDEL 71
Query: 72 VDK---DVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
+ D V WN ++ Y+ + A+ L ++M + G+ ++ V +L C
Sbjct: 72 CYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVC 125
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ +LPA G+ +HG+ ++ G S L+V AL+DMY K GL+ + +FD +
Sbjct: 499 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 558
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
KD++ W +I Y +G EA+ +MRI G++ + S+F +L+AC S
Sbjct: 559 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHS 611
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ TV ++ A + + G+ +H Y I+ G+ S+L V ALI+MY K G
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V R +F + KD+V WN +IG Y++N L EAL L M+ Q K + T +L A
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPA 506
Query: 121 C 121
C
Sbjct: 507 C 507
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ +T++ +L A + GN +G++LHG+ ++ S + L+DMY K G ++
Sbjct: 291 GVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGA 350
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
++F + D +V W +I Y R GL +A+ L +M+ +G++ + T ++ AC S
Sbjct: 351 TEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 410
Query: 125 ESI 127
S+
Sbjct: 411 SSL 413
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ + T +L G K +HGY +++G S+ V+ +LI Y K G V
Sbjct: 190 GVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESA 249
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD L + DVV WN +I NG G L + +M I G++ + +T V +L AC
Sbjct: 250 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAC 306
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H I G+S + L+ MYV G + GRKIFD +++ V LWN L+ YA+
Sbjct: 113 GKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 172
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G E++ L +KM+ G+ N TF +L A
Sbjct: 173 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAA 207
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G LHG+ ++G + V T+L+DMY K ++ RK+FD + ++ VV WN LI Y
Sbjct: 29 GTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCH 88
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++ +AL L+++M + G K +SSTFV +LS
Sbjct: 89 ESMMEKALSLIKEMLVLGFKPSSSTFVSILS 119
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + + +T+ +L A D G+ +G+ + Y + G + L V T+L+ MY K G
Sbjct: 309 MVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGN 368
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLS 119
++ R++F+ + +KD+ LW+ +I +Y +G+ EA+ L +KM + +K ++ + LL
Sbjct: 369 INKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLF 428
Query: 120 ACPAS 124
AC S
Sbjct: 429 ACSHS 433
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G S+H + I++GL +++ +L+ MY + G + RK+FD + +K +V W ++G Y
Sbjct: 134 GMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYV 193
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ G EA+ L +M+ Q + + FV L+S C
Sbjct: 194 KVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGC 227
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
++ S+H ++ G ++ L+ MY + G + R IFD +V K V+ W +I Y
Sbjct: 234 LLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGY 293
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A + EAL L ++M + +K N +T +LSAC
Sbjct: 294 AHSRRPKEALDLFRRMVMTEIKPNRATLATVLSAC 328
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 61/93 (65%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HGY + G+ + V T+LI++Y K G +++ +F +V ++V WN +I + A
Sbjct: 244 GRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLAS 303
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L +KM++QG+K NS TFV +L+AC
Sbjct: 304 NGREKEALDLFEKMKLQGLKPNSITFVAVLTAC 336
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L + T ++ AA + + G+ H I++G V L+DMY K+G +
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K F S KD WN +I YA++G +AL + + M ++G+K N TFVG+LSAC
Sbjct: 599 AHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSAC 656
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H Y ++ G+ ++++ ID Y K V GRK+FD +VDK+VV W +I +
Sbjct: 261 GKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQ 320
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
N +AL L +M G ++ +L++C
Sbjct: 321 NSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC 353
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 9 SASTVLI---LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
S+ T+LI LL + + + +HG I+ G+S +ALID+Y K V R
Sbjct: 440 SSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDAR 499
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F+ + DKD+V+W + Y + E+L L + +++ +K N TF +++A
Sbjct: 500 LVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITA 554
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H Y I++ + + V LIDMY K + RK+F+ + D+V +N +I Y+R
Sbjct: 362 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSR 421
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ EAL L ++MR+ FV LL
Sbjct: 422 QDKLCEALDLFREMRLSLSSPTLLIFVSLL 451
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SGL ++ +L A G+ G+ + + GLS ++ V T+L+DMY K G +
Sbjct: 199 SGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEE 258
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R +FD +V+KD+V W+ +I YA NGL EA+ L +MR ++ + VG LS+C +
Sbjct: 259 ARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCAS 318
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T+LID Y K G + ++ + +KD V++N +I A G VG A + +M G+
Sbjct: 345 TSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIP 404
Query: 109 TNSSTFVGLLSAC 121
N TFVGLL C
Sbjct: 405 PNEHTFVGLLCGC 417
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+ ++ + T +L A F +G +H + G + V T ++ Y K G +
Sbjct: 98 AAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRD 157
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+FD +V K+VV W +I G EA+ L + + G++ + V +L AC
Sbjct: 158 AWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRAC 215
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ +LPA G+ +HG+ ++ G S L+V AL+DMY K GL+ + +FD +
Sbjct: 774 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 833
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
KD++ W +I Y +G EA+ +MRI G++ + S+F +L+AC S
Sbjct: 834 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHS 886
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ TV ++ A + + G+ +H Y I+ G+ S+L V ALI+MY K G
Sbjct: 663 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 722
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V R +F + KD+V WN +IG Y++N L EAL L M+ Q K + T +L A
Sbjct: 723 VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPA 781
Query: 121 C 121
C
Sbjct: 782 C 782
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ +T++ +L A + GN +G++LHG+ ++ S + L+DMY K G ++
Sbjct: 566 GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGA 625
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
++F + D +V W I Y R GL +A+ L +M+ +G++ + T ++ AC S
Sbjct: 626 TEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 685
Query: 125 ESI 127
S+
Sbjct: 686 SSL 688
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ + T +L G K +HGY +++G S+ V+ +LI Y K G V
Sbjct: 465 GVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESA 524
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+FD L + DVV WN +I NG G L + +M I G++ + +T V +L A
Sbjct: 525 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 580
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H I G+S + L+ MYV G + GRKIFD +++ V LWN L+ YA+
Sbjct: 388 GKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 447
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
G E++ L +KM+ G+ N TF +L
Sbjct: 448 IGNFRESVSLFKKMQKLGVVGNCYTFTCVL 477
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%)
Query: 33 HGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
HG+ + G S + V +LIDMY+K GLV GR +F+ ++++D V WN +I YA+NG
Sbjct: 414 HGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYG 473
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EAL + ++M + G + + T +G+LSAC
Sbjct: 474 TEALEIFREMLVSGERPDHVTMIGVLSAC 502
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+ +G +HG + S + + +AL+DMY K +V ++ FD + +++V WN LI
Sbjct: 166 DLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLIT 225
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
Y +NG G+AL + +M G++ + T + SAC + +I
Sbjct: 226 CYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAI 268
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+H I+ SS + + L+D+Y K G + RK+FD + ++ WN ++G + G
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 92 VGEALYLLQKM 102
+ EAL L + M
Sbjct: 101 LDEALNLFKCM 111
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T+++ Y K V R +F ++++++VV WN LI Y +NG EA+ L ++ + +
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIW 382
Query: 109 TNSSTFVGLLSAC 121
TF LL+AC
Sbjct: 383 PTHYTFGNLLNAC 395
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + T+ +LPA + N +GK +H Y + L TAL+ MY K G ++
Sbjct: 310 GFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLS 369
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R +FD + KDVV WN +I A +G EAL+L KM + ++ NS TF G+LS C S
Sbjct: 370 RNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHS 429
Query: 125 E 125
Sbjct: 430 R 430
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M WSG+ + TV +LPA + + GK +HG+ ++ G+ +L V +AL+ +Y K
Sbjct: 170 MGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLS 229
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V R +FD + +DVV WN ++ Y +N + L KM G++ + +T+ ++
Sbjct: 230 VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGG 289
Query: 121 C 121
C
Sbjct: 290 C 290
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ L A +G+ + K +H + G+ S + V ALI Y K V
Sbjct: 73 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD LV +DVV W L Y + G + + + ++M G+K N T +L AC
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPAC 189
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIG----LSSHLNVLTALIDMYVKTGLVHWGRKI 67
T+L +L + G G G+ +H Y I+ G + + V TAL+DMY K G + RK+
Sbjct: 253 TLLPVLSSCGQVGALESGRWVHSY-IKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKV 311
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
FD + KDVV WN +I YA NGL EAL L +M +G++ + TF+ LL+AC S
Sbjct: 312 FDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHS 368
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 32/124 (25%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK--------------- 74
KS+H + I+ GL S V T L+D Y + G K+FD + +K
Sbjct: 138 KSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKH 197
Query: 75 -----------------DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
DVV+WN +I YA+NG E L L ++M ++ +K N T + +
Sbjct: 198 GKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPV 257
Query: 118 LSAC 121
LS+C
Sbjct: 258 LSSC 261
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
LI A ++ +L A +GK +H Y +++ L +L+A++DMY K G + +
Sbjct: 390 LIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAE 449
Query: 66 KIFDSLVDKD--VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K F + D+D V+L+N +I YA +G +A+ L M + +K ++ TFV LLSAC
Sbjct: 450 KSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSAC 507
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ TV+ L A + G +G+ +H Y +++GL+ +L+V +L+D Y K G
Sbjct: 232 MSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGS 291
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +++F + +++VV W L+ A NG EAL L ++M Q + TFVG+L A
Sbjct: 292 IREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPREITFVGVLYA 351
Query: 121 C 121
C
Sbjct: 352 C 352
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LL A + N G+ +H ++ G S + V +L+ +Y G K+F+ +
Sbjct: 142 TYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELM 201
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++D+V WN +I +A NG EAL L ++M ++G++ + T V L SAC
Sbjct: 202 GERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSAC 251
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 55/98 (56%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G F GK +H Y + GL L + TALID Y K G V K+FD ++ KDV W+ +I
Sbjct: 256 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMI 315
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A NG AL L +KM G K N TFVG+L+AC
Sbjct: 316 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTAC 353
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%)
Query: 37 IQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL 96
++ G SS + ++++I+++ K G +H R++FD +++VV W L+ Y GLV E
Sbjct: 132 MKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVR 191
Query: 97 YLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ KM + +NS+ G + SE +
Sbjct: 192 DVFDKMPQRNEASNSAMVSGYVRNSFFSEGV 222
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL-VH 62
G+ + T++ LL A G GK +HGY + G S + ALI +Y + G +H
Sbjct: 267 EGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLH 326
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+IF+ +DVVLW+ +IG+YAR G +AL L KMR + + N T + ++SAC
Sbjct: 327 LAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISAC 385
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L ++ A + +F G +HGY ++ G+ + V ALI+MY K G + RKIF +
Sbjct: 377 TLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEM 436
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D V WN +I Y +G +AL +M+ +G+K ++ TF+ +LSAC
Sbjct: 437 PSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSAC 486
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 11 STVLILLPAAGDTGNFV----VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
+++ +LP+ +F G LH G + V ++I MY K + R+
Sbjct: 63 NSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQ 122
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD++ +D + WN +I Y +NGL+ EAL +L+ G ++S C
Sbjct: 123 VFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMC 177
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 28 VGKSLHGYCI---QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+G+ +HG + +I + + + TA +D Y + G R +FD + K+ V W +I
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A N AL ++M+++G+ N T + LL+AC
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAAC 283
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + +TV+ +L D+G VG+ +HG + G+ NV TALI MY K G +
Sbjct: 192 GVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESA 251
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R++FD ++D+DV +W +I A +G+ EA+ L +M +K + T + +LSA
Sbjct: 252 REVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSA 307
Score = 65.9 bits (159), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K LHG+ ++G L + ALI MY + G + R++FD + +DVV W +I +
Sbjct: 115 AKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVN 174
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ L EA+ L Q+M G+ N +T + +L C S ++
Sbjct: 175 HHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGAL 213
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 58/105 (55%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L D +GK +HG +++G + V AL+ MY K G + F+ + +KDV
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN ++ YAR+G +AL + + M+ G+K + T VG+LSAC
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSAC 505
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
YV+ + R++FD + +KDVV WN L+ YA+NG V EA + M + NS ++
Sbjct: 121 YVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISW 176
Query: 115 VGLLSA 120
GLL+A
Sbjct: 177 NGLLAA 182
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+I Y + G + RK FD + +D V W +I YA++G EAL + +++ G N
Sbjct: 334 MITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLN 393
Query: 111 SSTFVGLLSAC 121
+TF LS C
Sbjct: 394 RATFGCALSTC 404
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +SG + T+ LL + + VG +H Y I+ GL ++V LIDMY K G
Sbjct: 462 MHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGS 521
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FDS + D+V W+ LI YA+ GL EAL L + M G++ N T++G LSA
Sbjct: 522 LKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSA 581
Query: 121 C 121
C
Sbjct: 582 C 582
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HG C++ GL ++ +L DMY K G + + F + + D+V WN +I +A
Sbjct: 287 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFAD 346
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EA+ ++M G+ +S T++ LL C
Sbjct: 347 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTC 379
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG T ++ A G+ +G+ LH + I+ HL ALI MY G
Sbjct: 157 MTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQ 216
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLS 119
+ +F + KD++ W +I Y + G EALYL + + QG + N F + S
Sbjct: 217 IEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFS 276
Query: 120 ACPA 123
AC +
Sbjct: 277 ACSS 280
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL + T + LL G G+ +H Y ++IG + V +L+ MY K +H
Sbjct: 364 GLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDA 423
Query: 65 RKIF-DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F D + ++V WN ++ + GE L ++M G K +S T LL C
Sbjct: 424 LNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTC 481
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
ST L+ A + + K +H + ++ + + +I+MY K G + RK+F
Sbjct: 64 EPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVF 123
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D++ +VV W +I Y++NG +A+ + +M G + TF ++ AC
Sbjct: 124 DTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKAC 176
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC G+ ++ L AA G GK LH Y ++ G +V +L+ +Y K G
Sbjct: 512 MCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGS 571
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+H + F + + D WN LI ++ NGL+ AL MR+ G+K +S T + L+SA
Sbjct: 572 IHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISA 631
Query: 121 C 121
C
Sbjct: 632 C 632
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK-TG 59
M SGL+ + T LL A+ + +G+ H I +GL L + AL+DMY+K +
Sbjct: 310 MELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSH 369
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F + +V+ W LI +A L ++ L +M+ G++ NS T +L
Sbjct: 370 ITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILG 428
Query: 120 ACPASESI 127
AC + S+
Sbjct: 429 ACSKTRSL 436
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + T + LL A GK LH + I G +L + TA++DMY K
Sbjct: 209 MIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRR 268
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+ + + DV LW LI + +N V EA+ + + M + G+ N+ T+ LL+A
Sbjct: 269 MVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNA 328
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H I++GL L + L+ +Y KT VH R +FD + ++DVV W ++ ++ +
Sbjct: 33 GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTK 92
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+AL L M G N T L +C A
Sbjct: 93 TKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFA 127
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK--DVVLWNC 81
G F G +H +++GL + V T+L++ Y K G SLV DVV W
Sbjct: 129 GEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTT 188
Query: 82 LIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ + NG GEA + KM G+ N TFV LL A
Sbjct: 189 MLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGA 227
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + STV +LP G+ + ++GK +HGY I++GL S V++AL+DMY + G
Sbjct: 90 MVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGC 149
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++FD + ++ N + +RNGLV AL + +K + ++ N T+ ++++
Sbjct: 150 APEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIAS 209
Query: 121 C 121
C
Sbjct: 210 C 210
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ +A T+ L+PA G+ GK +H + ++ G+ + V +ALIDMY G
Sbjct: 226 MQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGR 285
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + FD + +++V WN ++ YA +G E + + M G K +S TF +LSA
Sbjct: 286 IRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSA 345
Query: 121 C 121
C
Sbjct: 346 C 346
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 47/72 (65%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
+++L+ MY+K + +K+FD + D+DV++W+ +I Y+R G V A + +MR +G+
Sbjct: 1 MSSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGV 60
Query: 108 KTNSSTFVGLLS 119
+ N ++ G+++
Sbjct: 61 EPNLVSWNGMIA 72
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + T+ L A G+ F G LHG ++ S + + T+LIDMY K G +
Sbjct: 346 GFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSS 405
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+K+FD + ++ W +I YARNG EAL + M+ + + N ST V +++AC
Sbjct: 406 KKVFDRMKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMTAC 462
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 43 SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
S++ V +ALI MY K G + ++FD++ ++++V W +I YARNG +AL L+ +M
Sbjct: 572 SNVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGYARNGHCRKALQLMYRM 631
Query: 103 RIQGMKTNSSTFVGLLSAC 121
R +G + +L+AC
Sbjct: 632 RAEGFVVDDYILTTVLTAC 650
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+ +GK +H ++ +L V +A+++ Y K G + + FD + +DVV W +I
Sbjct: 266 DLALGKQIHARILKSNWR-NLIVDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIIT 324
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++GL EAL LL +M + G N T L AC
Sbjct: 325 ACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKAC 361
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ ST++ ++ A G ++G+ +H I+ + +++ + T L+ Y + +
Sbjct: 451 NKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVL 510
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
+ +DVV W +I AR GL EAL L++M +G+ NS T+ L AC E+
Sbjct: 511 KYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKACAKLET 568
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTG 59
MC +G+ T+L LL A D G+ GK +H ++I + +L ALIDMY K G
Sbjct: 262 MCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCG 321
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +F S+ DKDV+ WN +I A +G E+L L + M+ + N TFVG+L
Sbjct: 322 NIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLV 381
Query: 120 ACPASESI 127
AC + I
Sbjct: 382 ACSHAGEI 389
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
WS LIA + G+ V + L + L S +I YVK G +
Sbjct: 177 WSSLIAGYAR----------RGDLKVARKLFNEMPERDLVS----WNVMITGYVKQGEME 222
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD KDVV WN +I Y GL +AL L +M G+ + T + LLSAC
Sbjct: 223 SARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSAC 281
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +LPA D +G +HG+ + L ++V AL+DMY K G + + +F+ +
Sbjct: 320 TVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEM 379
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+KD WN LI Y NG EAL + M +G + N T +LSAC
Sbjct: 380 TEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSAC 429
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG ++ L V T+L+DMYVK G V + RK+FD + + +V W +I YAR
Sbjct: 142 GFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYAR 201
Query: 89 NGLVGEALYLLQKM 102
G + EA L M
Sbjct: 202 CGDMVEARKLFDGM 215
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL------SSHLNVL--TALIDMYVKTGLVHW 63
TV +LPA + G+ +HGY I GL + +VL AL+DMY K G +
Sbjct: 337 TVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRD 396
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD++ +KDV WN +I Y +G EAL +MR + N +FVGLLSAC
Sbjct: 397 ARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSAC 454
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+I T ++ A GD G+ K +HG + GL + V +AL+ Y+K LV
Sbjct: 129 VIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAH 188
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++F+ L +DVVLWN ++ YA+ G EAL + ++M G+ T G+LS
Sbjct: 189 EVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLS 242
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ TV +L G+F G+++HG+ ++G S + VL ALIDMY K
Sbjct: 225 MVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKC 284
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F+ + +KD+ WN +I + R G L L +M ++ + T +L A
Sbjct: 285 ASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPA 344
Query: 121 C 121
C
Sbjct: 345 C 345
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + L T N GK LH + ++ G + +T++I+MY K L+++ K+F+
Sbjct: 31 TCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYP 90
Query: 72 V--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK-TNSSTFVGLLSAC 121
DK+V +N +I + NGL + L ++MR+ G+ + TF ++ AC
Sbjct: 91 THHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRAC 143
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVH 62
G+ + S ++ +L A G G +H Y + +SS+ + TAL+DMY K G V
Sbjct: 241 EGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVE 300
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD + DKDV WN +I A NG ++L L Q+M + G K N +TFV +L+AC
Sbjct: 301 SALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTAC 359
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
TA+ID Y K G V R++FD + +++VV W+ ++ Y+R E L L +M+ +G++
Sbjct: 185 TAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVR 244
Query: 109 TNSSTFVGLLSAC 121
N S V +L+AC
Sbjct: 245 PNDSVLVTVLTAC 257
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H Y + IGL V +ALI MY ++G + KIFDS+ + D+V W +I YA
Sbjct: 473 GKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAE 532
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G EA+ L + + G+ + TF+G+L+AC
Sbjct: 533 HGYSQEAISLFENISSVGLMPDYVTFIGILTAC 565
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HG+ +++GL L+V ++I +Y K GL+ +FD + KD++ W+ +I Y +
Sbjct: 372 GEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQ 431
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA L M +G K N +LS C
Sbjct: 432 GSHAKEAFNYLSWMSREGPKPNEFALASVLSVC 464
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + L A+ ++G GK++H I+ G + V+ L MY K + ++F +
Sbjct: 254 TFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKM 313
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DVV W LI Y + G AL ++MR + N TF ++SAC
Sbjct: 314 STPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISAC 363
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SGL V + L A N G+ LHG+ ++ GL + + V +AL+DMY+K G
Sbjct: 145 SGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQ 204
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G +F+++ ++VV W +I G + L +M + +S TF L A
Sbjct: 205 GCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAE 264
Query: 124 S 124
S
Sbjct: 265 S 265
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HGY ++ G S +++ AL+ MY K G + +F+ +V++D + WN +I Y++
Sbjct: 506 GKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQ 565
Query: 89 NGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSACPAS 124
+G EA++ + M+I G+K + +TF +LSAC S
Sbjct: 566 HGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHS 602
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G F GK +H Y + GL L + TALID Y+K G V K+F+ + KD
Sbjct: 228 VLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKD 287
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W+ +I A NG AL L +KM G K N TFVG+L+AC
Sbjct: 288 VATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTAC 333
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 37 IQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL 96
+++G SS + ++++I+ + K +H R++FD +++VV W L+ Y GLV EA
Sbjct: 112 MKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEAR 171
Query: 97 YLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ KM ++ + S+ G + SE +
Sbjct: 172 DVFDKMPLRNEASYSAMVSGYVRNGFFSEGV 202
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + GL + + IL+ + N +GK +H Y I+ + S ++++T L+ MY++ L
Sbjct: 391 MQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFEL 450
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F+ + KD+V+WN LI + + G AL + ++++ G+ +S T VGL SA
Sbjct: 451 FTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSA 510
Query: 121 C 121
C
Sbjct: 511 C 511
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G ++L L PA G+ KS+HGY ++ + V +LIDMY K G
Sbjct: 191 MQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGD 248
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNS 111
VH +++FD + +D V W ++ Y +NG E L LL KMR +K N
Sbjct: 249 VHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNK 299
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG-LVH 62
SG++ + T++ L A + +G LHG + G S ++V AL+DMY K G L
Sbjct: 495 SGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCS 554
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R + KD V WN +I Y NG EA+ ++M+++ ++ N TFV +L A
Sbjct: 555 VERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPA 612
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK ++ Y +Q+GL S + V T ++ MY K G + R++F SL +D+V W+ +
Sbjct: 318 GKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVE 377
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
G E L + Q M+ +G+K + + L+S C +I
Sbjct: 378 TGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNI 416
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + +LPA + H I++G S + +LIDMY K G + + K F +
Sbjct: 605 TFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEM 664
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+KD + WN ++ YA +G A+ L M+ ++ +S +++ +LSAC S
Sbjct: 665 ENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHS 717
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T +L A +F G +++ + GL + + T+LIDM+ K G +
Sbjct: 94 GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R +FD + KD V WN +I +++ EAL + +M+++G + + V +L+ PA
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDK---VSILNLAPA 209
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 71/121 (58%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T++ + A + +GK + ++G+ S+ V+ AL+DMY+K G
Sbjct: 224 MVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGD 283
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ R+IFD DK++V++N ++ NY ++GL GE L +L +M +G + + T + ++A
Sbjct: 284 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 343
Query: 121 C 121
C
Sbjct: 344 C 344
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G T+L + A G+ VGKS H Y + GL N+ A+IDMY+K G
Sbjct: 325 MLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGK 384
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNG------------------------------ 90
K+FDS+ +K VV WN LI R+G
Sbjct: 385 REAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQA 444
Query: 91 -LVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ EA+ LL++M+ QG+K + T VG+ SAC
Sbjct: 445 SMFEEAIDLLREMQNQGIKGDRVTMVGIASAC 476
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ T LL A F G +HG +++GL L V +LI Y G V G
Sbjct: 127 GIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLG 186
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FD +++++VV W LI Y+ + EA+ L +M G++ N T V +SAC
Sbjct: 187 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISAC 243
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L + A + G GK +H I G + L + TAL+DMY K G + +K+FDS+
Sbjct: 508 TFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSI 567
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
V+K VV W+ +I + +G + A L KM + +K N TF+ +LSAC + S+
Sbjct: 568 VEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSV 623
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HG+ ++ G V +L+DMY K G IF+ + K +V WNC+I +++
Sbjct: 425 GQQIHGHVMKRGFFDEF-VQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQ 483
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG+ EAL L +M ++ N TF+ + AC
Sbjct: 484 NGISVEALSLFDEMFKNRLEINKVTFLSAIQAC 516
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A G +VG+ LHG ++ G + T+L+ MY + + +K+FD + +D
Sbjct: 108 VIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRD 167
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+VLW+ +I Y NG+ E L + + M +G++ +S + + AC
Sbjct: 168 LVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEAC 213
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + +L + A G G + KS+HGY ++ G+ ++ +LI MY + G
Sbjct: 194 MICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGY 253
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +++F+ + D+ W +I Y +N EAL + KM+ ++ N T + +L++
Sbjct: 254 LCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNS 313
Query: 121 C 121
C
Sbjct: 314 C 314
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ--IGLSSHLNVLTALIDMYVKT 58
M + +T++ LLP+ G G+S+HG+ I+ GL SHLN AL+ MY K
Sbjct: 148 MLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLN--NALMSMYAKC 205
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ + +FD + +K VV WN +IG Y +NGL +A+ ++M +G +S T + L+
Sbjct: 206 DDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV 265
Query: 119 SACPASESI 127
SA E++
Sbjct: 266 SANAFPENV 274
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A T+ LL GN +G++LH Y ++ + + TALIDMY K G
Sbjct: 445 MSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGR 504
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + K+F ++ D + WN +I Y+ GL A K++ QG+K + TF+G+L+A
Sbjct: 505 LDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAA 564
Query: 121 C 121
C
Sbjct: 565 C 565
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
+ + C++ G++ ++V T+LID+Y+K G R +FD + +DVV WN LI Y++
Sbjct: 75 ARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQ 134
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
NG + A+ L M + K N +T V LL +C E I
Sbjct: 135 NGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELI 173
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
+ +F +G + HGY ++ GLS+ V LI +Y + + +F + +K ++ WN
Sbjct: 365 NPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNS 424
Query: 82 LIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+I + G +A+ L +M + G K ++ T LLS C
Sbjct: 425 MISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGC 464
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ +++ +LPA G VGK +H Y + G + ALI+MY K G +
Sbjct: 238 GIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEA 297
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD LV+KDV+ W+ +IG A +G EA+ L ++M + N TF+G+L AC
Sbjct: 298 WNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLAC 354
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 43 SHLNVLT--ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQ 100
SH +V++ +LI YVK G ++ R++FD + + +V W +I Y R G G+AL + +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 101 KMRIQGMKTNSSTFVGLLSAC 121
+M++ G++ + + + +L AC
Sbjct: 233 EMQMVGIEPDEISIIAVLPAC 253
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ +++ +LPA G VGK +H Y + G + ALI+MY K G +
Sbjct: 238 GIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEA 297
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD LV+KDV+ W+ +IG A +G EA+ L ++M + N TF+G+L AC
Sbjct: 298 WNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLAC 354
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 43 SHLNVLT--ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQ 100
SH +V++ +LI YVK G ++ R++FD + + +V W +I Y R G G+AL + +
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 101 KMRIQGMKTNSSTFVGLLSAC 121
+M++ G++ + + + +L AC
Sbjct: 233 EMQMVGIEPDEISIIAVLPAC 253
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 68/121 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ TV+ ++ A + G +G +H ++ ++ VL +LIDMY + G
Sbjct: 214 MQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGC 273
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD + +++V WN +I +A NGL +AL + M+ +G++ N ++ L+A
Sbjct: 274 IELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTA 333
Query: 121 C 121
C
Sbjct: 334 C 334
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 12 TVLILLPAAGDTGN---FVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKI 67
T++ LL A + + G +LH + + G + + + V TALIDMY K G + + R +
Sbjct: 89 TLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLV 148
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
FD + +++V WN +I Y +NG V +AL L K+ ++ +
Sbjct: 149 FDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNV 188
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
+ID Y+K G V K+FD L K+VV W +IG + + EAL ++M++ G+
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 109 TNSSTFVGLLSAC 121
+ T + ++SAC
Sbjct: 221 PDFVTVIAIISAC 233
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK- 74
LL GD+ K++HGY ++I + + TAL+D Y+K G V + R +FD K
Sbjct: 380 LLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKP 439
Query: 75 -DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D WN +IG Y NG A + +M + ++ NS+TFV +LSAC S I
Sbjct: 440 DDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQI 493
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV-KTGLVHWGRKIFDS 70
T ILL A + + + LH + + G SH + TALI Y T H+ ++FD
Sbjct: 37 TFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYALELFDE 96
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +N ++ +RNG G+A++L +++ ++ NS T V LLSA
Sbjct: 97 MPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSA 146
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR--KIFD 69
T++ ++ A N +GK +HG +++ H+ V+T+L+DMY K G WG +F
Sbjct: 240 TLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGC--WGSAFDVFS 297
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++++ WN +I N A+ L ++M +G+ +S+T+ L+S
Sbjct: 298 RSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLIS 347
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
I S ++ L +A D N + +H ++G+ + V T+L+ Y K G++ K
Sbjct: 133 IRPNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNK 192
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
+F++L K+VV +N + +NG + + M + K N T V ++SAC
Sbjct: 193 VFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSAC 248
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G ST L + + VGK LH ++ G + L V ALI MY K G
Sbjct: 447 MGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGG 506
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V K+F + D++ WN LI YA NG EA + ++M +G + TF+G+LSA
Sbjct: 507 VQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSA 566
Query: 121 C 121
C
Sbjct: 567 C 567
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 34 GYCIQIGLSSHLNVL-----------TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCL 82
GYC +S LN+ +I Y + G + +IF+++ ++V+ WN L
Sbjct: 368 GYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSL 427
Query: 83 IGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
I + +NGL +AL L M +G K + STF LS+C
Sbjct: 428 ITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSC 466
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ + T +L A G+ +HG+ ++ G S++ V +AL+DMY K G +
Sbjct: 230 QGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKN 289
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + +++ D DVV WN L+ + R+GL EAL L + M + MK + TF +L+ C
Sbjct: 290 AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC 347
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
KS+HG I+ G ++ V AL+DMY KTG + +F+ +++KDV+ W L+ YA+N
Sbjct: 355 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 414
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E+L + MR+ G+ + +LSAC
Sbjct: 415 NSHEESLKIFCDMRVTGVNPDQFIVASILSAC 446
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G AS T+ +L G G+ +HG+ ++ G ++ V+T L+DMY K
Sbjct: 124 MRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKC 183
Query: 61 VHWGRKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
V +F L K+ VLW ++ YA+NG +A+ + M QG++ N TF +L
Sbjct: 184 VSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTIL 243
Query: 119 SACPA 123
+AC +
Sbjct: 244 TACSS 248
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ V +L A + GK +H I+ GL +V +L+ MY K G +
Sbjct: 430 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 489
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF S+ KDV+ W +I YA+NG +L M G + + TF+GLL AC
Sbjct: 490 ADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFAC 547
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 73/121 (60%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+I+S ST+ +L A G+ G +HG +++G S + V ++LI+MY K +
Sbjct: 233 MRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEM 292
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +K+FD + D++VV+WN ++G YA+NG + + + L +M G + T+ +LS+
Sbjct: 293 LCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSS 352
Query: 121 C 121
C
Sbjct: 353 C 353
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+ ++ +T + +L A + G+ +H G +AL+DMY K G V
Sbjct: 641 NNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKS 700
Query: 64 GRKIFDSL-VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+F+ L + KDV+ WN +I +A+NG AL + +M + + + TF+G+L+AC
Sbjct: 701 AAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTAC 759
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ + +L A G+ G HG +++GL ++L ++LIDMY K G
Sbjct: 435 MNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGG 494
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RKI+ + + VV N LI YA EA+ LL +M+I G+K + TF L+
Sbjct: 495 IEDARKIYSCMPEWSVVSMNALIAGYAIKD-TKEAINLLHEMQILGLKPSEITFASLIDC 553
Query: 121 CPASESI 127
C S +
Sbjct: 554 CKESPKV 560
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ LH I+ + +L V AL+DMY K G + RK F+ + +D + WN ++ Y
Sbjct: 361 IGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYV 420
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ EA + ++M G+ + +LSAC
Sbjct: 421 QEEEETEAFNMFRRMNRHGVVPDEVCMASILSAC 454
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVKTGLVHW 63
GL S T L+ ++ ++G +H ++ GL L T+L+ MY+ + +
Sbjct: 539 GLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAE 598
Query: 64 GRKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G +F L + K +VLW LI + +N +AL L ++MR + + +TFV +L AC
Sbjct: 599 GNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRAC 657
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
++ LI S ST L + N G S+H I+ G S + LI Y K ++
Sbjct: 68 YTSLINSFSTTL---SSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLN 124
Query: 63 WGRKIFDS---LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
R +F+S L + D + LIG Y R G+ +AL L +M+ G + V +L+
Sbjct: 125 SARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQ-SGFVLDELVIVTVLN 183
Query: 120 AC 121
AC
Sbjct: 184 AC 185
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +GL ++ T + AA + N +GK +HG + G S V ALI +Y K G
Sbjct: 679 MNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGT 738
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + F + DK+ + WN +I Y+++G EAL L + M+ + N TFVG+LSA
Sbjct: 739 IDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSA 798
Query: 121 C 121
C
Sbjct: 799 C 799
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ + T +L G +G+ +H ++ G ++ V + LIDMY K G
Sbjct: 477 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 536
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ KIF L + DVV W +I Y ++ EAL L ++M+ QG+K+++ F +SA
Sbjct: 537 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 596
Query: 121 C 121
C
Sbjct: 597 C 597
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + +L A F GK LHG ++ G SS V AL+ +Y ++G
Sbjct: 275 MHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGN 334
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +IF + +D V +N LI A+ G + AL L +KM + K + T LLSA
Sbjct: 335 LSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSA 394
Query: 121 CPA 123
C +
Sbjct: 395 CAS 397
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV LL A G GK H Y I+ G++S + V +L+D+YVK + + F +
Sbjct: 387 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLAC 446
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++VVLWN ++ Y + + ++ + +M+I+G+ N T+ +L C
Sbjct: 447 ETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTC 496
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 14 LILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD 73
++L +G+ +F + +H I G S + LID+Y K G + +K+F++L
Sbjct: 187 VVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKA 246
Query: 74 KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+D V W +I ++NG EA+ L +M G+ F +LSAC E
Sbjct: 247 RDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVE 298
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H G S L++ AL+ +Y + G V FD + KD V WN L+ +A+
Sbjct: 606 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ 665
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+G EAL + +M G++ NS TF +SA
Sbjct: 666 SGYFEEALNIFAQMNKAGLEINSFTFGSAVSA 697
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ A++ T L LL ++ +F G LHG +++G + + LID Y+ G
Sbjct: 72 MEQHGVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGD 131
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ +FD + + + WN + + L+G L ++M + ++ + F +L
Sbjct: 132 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 191
Query: 121 C 121
C
Sbjct: 192 C 192
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 53/93 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +HGY I+ GL V TAL+D+Y K G ++ R IFD + DKD+V W +I
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G E L + + G++ N TF G+L+AC
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC 307
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG+ + T +L A D +GK +HGY ++G +AL+ +Y K G
Sbjct: 291 SGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTET 350
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++F+ + D+V W LI YA+NG AL + + G K + TFVG+LSAC
Sbjct: 351 ARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSAC 408
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD-SLVDK 74
LL A DT + +GK LHG+CI+ S + VL+ ++DMY K G++ R +F + K
Sbjct: 422 LLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKK 481
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
D+VLWN ++ A GL GEAL L +M+++ + N
Sbjct: 482 DIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPN 517
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ ++ ++ L A + G+S+HGY ++ +S L + T++IDMY K G
Sbjct: 579 MQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGN 638
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F K++ ++N +I YA +G EAL L Q++ QG+ + TF +LSA
Sbjct: 639 LDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSA 698
Query: 121 C 121
C
Sbjct: 699 C 699
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 29 GKSLHGYCIQIG--LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK--DVVLWNCLIG 84
G+ +HG+ +++G + V T+L+DMY K G++ K+FD + ++ + V+WN +I
Sbjct: 226 GRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIV 285
Query: 85 NYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSACPASESI 127
Y +NG+ EA+ L +KMR + G++ + + G SAC E++
Sbjct: 286 GYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAV 329
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+GL T +L A +F G +H + + GL S V + +DMY + G + +
Sbjct: 97 NGLYPDNYTYPFVLKAVAFIADFRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDF 156
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSACP 122
RK+FD + ++D V WN +I + EA+ + Q+MR+ K + +T V L+AC
Sbjct: 157 VRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACA 216
Query: 123 ASESI 127
AS ++
Sbjct: 217 ASRNV 221
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 31/144 (21%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S +TV+ L A + N VGK +HG+ I+ L + + AL+DMY K G V R+IF
Sbjct: 204 SEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIF 263
Query: 69 DSLVDK-------------------------------DVVLWNCLIGNYARNGLVGEALY 97
D +++K DVVLW +I Y + EA+
Sbjct: 264 DGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVA 323
Query: 98 LLQKMRIQGMKTNSSTFVGLLSAC 121
L ++M+++G+K + V LL+ C
Sbjct: 324 LFEEMQVRGVKPDKFIVVALLTCC 347
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ V+ LL G G+ +H Y + + V T+LI+MY K G V
Sbjct: 332 GVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKS 391
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+ L +KD W +I A NG EAL L ++M+I G K + TF+ LL+AC
Sbjct: 392 LEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNAC 448
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVH 62
G+ + T+L + PA GN + +S+HGY + G ++ + ++ ALID+Y K G +
Sbjct: 241 DGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIE 300
Query: 63 WGRKIFDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F + D ++ V WN ++ YA G+V EA+ +KM G++ N F+ +LSA
Sbjct: 301 SASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSA 360
Query: 121 CPAS 124
C S
Sbjct: 361 CSHS 364
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 3 WSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
+SG S+ST++ L+P G+ + S+HG+C++ G+ + V TA +Y K +
Sbjct: 303 FSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEID 362
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD +K VV WN +I Y +NG A+ L ++M N+ T +LSAC
Sbjct: 363 LARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSAC 421
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + +A T+ +L A G+ GK +H L ++ V TAL+DMY K G
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGN 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ ++FDS+ +K+ V WN +I Y +G EAL L +M G ++ TF+ +L A
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521
Query: 121 C 121
C
Sbjct: 522 C 522
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH + I G S++ V +AL+D+Y K V + RK+FD + ++D VLWN +I +N
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCC 189
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+++ L ++M G++ +SST +L A
Sbjct: 190 FDDSIQLFREMVADGVRVDSSTVTAVLPA 218
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ +STV +LPAA + VG + ++IG VLT LI +Y K G
Sbjct: 200 MVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGD 259
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
V+ R +F + D++ +N +I + NG ++ L +++ G + +SST VGL+
Sbjct: 260 VNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 73.9 bits (180), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL + T + +L A D G+ +H + V++ALI+MY K G H
Sbjct: 281 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 340
Query: 65 RKIFDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+K+FD + D++ WN +I YA +G EA+ L KM+ G + N T+VGLL+AC
Sbjct: 341 KKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTAC 399
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKT 109
++ +++ G ++ K+F ++ K+V+ W ++ Y ++GL EAL L KM+ G+K
Sbjct: 225 MVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKP 284
Query: 110 NSSTFVGLLSAC 121
+ TFV +L AC
Sbjct: 285 TTGTFVTVLGAC 296
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S T+ ++ A G F +GKS+HGY ++ LS +L+ MY K G +
Sbjct: 364 GMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQS 423
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+FD + +D+V WN ++ YA+NG V +A L +MR +S T V L+ C ++
Sbjct: 424 YIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCAST 483
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + + A T LL A F +G SLH I GLS+ + ++LI+ YVK G
Sbjct: 60 MLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGY 119
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
RK+FD + +++VV W +IG Y++ G V EA L ++MR +G++ +S T + LL
Sbjct: 120 NDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLL 177
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + G+ S+ T+L LL + + LHG I G S LN+L +++++Y K G
Sbjct: 161 MRYEGIQPSSVTLLSLLFGVSEVPYV---QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGS 217
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ RK+F+ + +DVV WN L+ YA+ G + E L LL++M++QG++ F +LS
Sbjct: 218 IEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLS 276
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A TG+ +G+ +HG ++ G ++ T+ I MY+K G ++ K+F+ +DKD
Sbjct: 274 VLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKD 333
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VVLW +I +N +AL + +M GMK ++ T +++AC
Sbjct: 334 VVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITAC 379
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ L+ TG GK +HG+ I+ GL + V T+L+DMY K G + ++ F+ +
Sbjct: 472 TIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLM 531
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D+V W+ +I Y +G AL L K +K N F+ +LS+C
Sbjct: 532 PSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSC 581
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 20 AGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLW 79
A T GK H Y I++ L++ L V +AL+ MY K G + ++F ++D+V W
Sbjct: 505 ASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSW 564
Query: 80 NCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
N +I Y+++G +AL + +M+ + M ++ TF+G+++AC
Sbjct: 565 NSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC 606
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 60/93 (64%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+ +H C++ GL H++V T+L+DMY+KT V+ GR++FD + +++VV W L+ Y+
Sbjct: 111 LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYS 170
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NGL G L +M+ +G+ N T +++A
Sbjct: 171 WNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAA 203
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + G++ + TV ++ A + G +G +H ++ G + V +LI +Y + G+
Sbjct: 185 MQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM 244
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD + +D V WN +I Y RNG E + KM++ G+K TF ++ +
Sbjct: 245 LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKS 304
Query: 121 CPA 123
C +
Sbjct: 305 CAS 307
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+H I+ +V TAL+D YVK G K+F+ + KD++ W+ ++ YA+ G
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
EA L ++ +G+K N TF +++AC +
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACAS 506
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC G + T ++ A G G+ +HG + L + + +ALIDMY K G
Sbjct: 466 MCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGN 525
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + IF+ + + D V W +I YA++GLV +AL L +KM +K N+ T + +L A
Sbjct: 526 LTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFA 585
Query: 121 C 121
C
Sbjct: 586 C 586
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 30 KSLHGYCIQIGLSS-HLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K HG ++ G + ++VL AL D YVK + G K+F + KD+V W ++ Y +
Sbjct: 393 KEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQ 452
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G+AL + +M +G N TF +++AC
Sbjct: 453 CSEWGKALAIFSQMCNEGFAPNHFTFSSVITAC 485
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ + +T L + A G G+ +H Y + GL S+ +V TALI+MY K G+
Sbjct: 261 MIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGV 320
Query: 61 VHWGRKIFDSLVDKDVV--LWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ R +FDS +V WN +I Y++ G EAL + +M +K + TF +
Sbjct: 321 LCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVF 380
Query: 119 SA 120
++
Sbjct: 381 NS 382
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
V G+ +H + G H V T+L+++Y K G+ +F+++ D + V WN +I +
Sbjct: 186 VFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGF 245
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NGL +A L M G+ N +TF+ + A
Sbjct: 246 TSNGLYLQAFDFLINMIENGVSPNKTTFLCISKA 279
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +LP G GK +H Y + GL +++V +LIDMY K G + G K+F+ +
Sbjct: 442 TLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQM 501
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ K+ + +N +I +GL + L ++M GMK N TF+ LLSAC
Sbjct: 502 MVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSAC 551
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL + V +LPA G F GK +H + ++ GL + + V +AL+DMY G +
Sbjct: 334 GLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEA 393
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF +++D D+++WN LI Y G A + +++ + + N T V +L C
Sbjct: 394 ESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPIC 450
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGD-TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M GL A + V +LP G +G ++HG ++ G S L V A+IDMY K G
Sbjct: 228 MRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCG 287
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+F +V +D+V W+ LI Y++NG+ E+ L +M G+ TN +L
Sbjct: 288 YPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLP 347
Query: 120 A 120
A
Sbjct: 348 A 348
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G T ++L A +G+ ++ + ++L V ALIDM+VK
Sbjct: 127 MLRHGFAPDNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCES 186
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RK+FD + +D+ W LI NG EA+ L +KMR++G+K +S +L
Sbjct: 187 LEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPV 246
Query: 121 C 121
C
Sbjct: 247 C 247
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG++ S T++ ++ A D V GK +H + ++G L VL+A++DMY K G
Sbjct: 311 MHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGS 370
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RK F+ + DVVLW +I Y +NG L L KM+++ + N T +L A
Sbjct: 371 LADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRA 430
Query: 121 CPA 123
C +
Sbjct: 431 CSS 433
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +I + T+ +L A GK +H I+ G + + +AL MY K G
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ G IF + +DV+ WN +I ++NG +AL L +KM ++G+K + TFV LLSA
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
Query: 121 C 121
C
Sbjct: 532 C 532
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + +I +A T+ + AA + + V GK H ++ G S + V ++L++MY KTG
Sbjct: 109 MRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGF 168
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V RK+FD + +++ V W +I YA + + +A+ + + MR + N +LSA
Sbjct: 169 VFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA 228
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ +H I+ GL + ++V AL+ MY K G + + F+ DK+ + W+ ++ YA
Sbjct: 237 TGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYA 296
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ G +AL L KM G+ + T VG+++AC
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINAC 330
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL--VDKDVVLWNCL 82
N + G++LH ++ G S + V +++Y KT + +FDS+ DKD V WN L
Sbjct: 26 NILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSL 85
Query: 83 IGNYARNGLVGE---ALYLLQK-MRIQGMKTNSSTFVGLLSA 120
I +++N A+ L ++ MR + N+ T G+ SA
Sbjct: 86 INAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSA 127
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A T+ +L A +G +GK +H +++ L +L V T+++DMY K G V RK F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D L K+V W ++ Y +G EA+ + +M G+K N TFV +L+AC
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAAC 411
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
V + +HG ++ G L V L+D Y K G + RK+FD + + DV WN LI YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 88 RNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPAS 124
+NGL EA L M +G ++ N+ T +L AC S
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHS 313
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L + ST + + + GK +H G S + V +ALIDMY K G ++ R
Sbjct: 82 LHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR 141
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
K+FD + +++VV W +I Y +N EA++L ++
Sbjct: 142 KLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEF 178
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A T+ +L A +G +GK +H +++ L +L V T+++DMY K G V RK F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D L K+V W ++ Y +G EA+ + +M G+K N TFV +L+AC
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAAC 411
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
V + +HG ++ G L V L+D Y K G + RK+FD + + DV WN LI YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 88 RNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPAS 124
+NGL EA L M +G ++ N+ T +L AC S
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHS 313
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L + ST + + + GK +H G S + V +ALIDMY K G ++ R
Sbjct: 82 LHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR 141
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
K+FD + +++VV W +I Y +N EA++L ++
Sbjct: 142 KLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEF 178
>Medtr6g092220.1 | PPR containing plant-like protein | HC |
chr6:34758649-34757307 | 20130731
Length = 415
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G A S L LL D + +GK +H + + ++ + LI +YVK G V
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDA 153
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FD + D++V WN +IG Y NGL + L + ++MR QG+ + TF +L+ C
Sbjct: 154 RKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMRQQGIVPDEETFALVLAVC 210
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+I T +L + +GK +HG +++ L S + + + ++DMY K G +
Sbjct: 569 GVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +F+ +D V W+ +I YA +GL +A+ L ++M++Q +K N + F+ +L AC
Sbjct: 629 RIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRAC 685
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A ++ G LHG ++ GL ++ V ++DMY K G + IFD + KD
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDA 438
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
V WN +I + +N V E L L M M+ + TF ++ AC +++
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKAL 489
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T ++L A ++ +G +H IQ+G S + TAL+DMY + IF
Sbjct: 171 ATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCE 230
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++ V W+ +I Y RN E L L + M +GM + +TF +C
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVL-----------TALIDMYVKTGLVHWGRKIFDSLVDK 74
FV L YC + L+ NV +I Y G + + + +FDS+ ++
Sbjct: 74 FVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER 133
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
DVV WN ++ Y +NG +++ + KMR+ ++ + +TF +L AC E
Sbjct: 134 DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIED 185
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ S +T + F +G LH Y ++ V TA +DMY K +
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
RK+F++ + N LI YAR V EAL + + ++ + + + G L+AC A
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG I+ G+ V +A+IDMY K G++ KI + L ++ V WN +I ++
Sbjct: 492 GMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSS 551
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
AL +M G+ ++ T+ +L C
Sbjct: 552 EKQGENALSYFSRMLQVGVIPDNFTYATVLDIC 584
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+I T +L + +GK +HG +++ L S + + + ++DMY K G +
Sbjct: 569 GVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +F+ +D V W+ +I YA +GL +A+ L ++M++Q +K N + F+ +L AC
Sbjct: 629 RIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRAC 685
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A ++ G LHG ++ GL ++ V ++DMY K G + IFD + KD
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDA 438
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
V WN +I + +N V E L L M M+ + TF ++ AC +++
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKAL 489
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T ++L A ++ +G +H IQ+G S + TAL+DMY + IF
Sbjct: 171 ATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCE 230
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++ V W+ +I Y RN E L L + M +GM + +TF +C
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVL-----------TALIDMYVKTGLVHWGRKIFDSLVDK 74
FV L YC + L+ NV +I Y G + + + +FDS+ ++
Sbjct: 74 FVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER 133
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
DVV WN ++ Y +NG +++ + KMR+ ++ + +TF +L AC E
Sbjct: 134 DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIED 185
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ S +T + F +G LH Y ++ V TA +DMY K +
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
RK+F++ + N LI YAR V EAL + + ++ + + + G L+AC A
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG I+ G+ V +A+IDMY K G++ KI + L ++ V WN +I ++
Sbjct: 492 GMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSS 551
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
AL +M G+ ++ T+ +L C
Sbjct: 552 EKQGENALSYFSRMLQVGVIPDNFTYATVLDIC 584
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%)
Query: 10 ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD 69
A T+ +L AA +G LH Y ++GL + ++V ++L+ MY K G + RK FD
Sbjct: 638 AFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFD 697
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ D++ W LI +YA++G +AL + M+ +G++ ++ TFVG+LSAC S
Sbjct: 698 DVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHS 752
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ T++ +L A D G+ +HG ++GL ++ V AL++MY K G
Sbjct: 528 MLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGS 587
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RK+FD L KD + L+ YA+NGL+ E+ L M ++ T +L A
Sbjct: 588 LSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGA 647
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC + L+ ++ T +L A +GK +HG I+ G ++ + V TA++D+Y K G
Sbjct: 228 MCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGC 286
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + F + ++VV W +I + + AL L + MR G + N+ T +LSA
Sbjct: 287 MSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSA 346
Query: 121 CPASESI 127
C E I
Sbjct: 347 CAKPELI 353
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
+H Y ++ GL ++ V +L MY K G + ++F + KD V W +I + +G
Sbjct: 458 VHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGY 517
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+AL L ++M Q + + T + +L+AC
Sbjct: 518 PDQALRLFKEMLYQEVVPDHITLISILTAC 547
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 30 KSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K LH + ++ L S + + +LI +Y K+ + K+FD++ +V WN +I Y R
Sbjct: 54 KILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVR 113
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
N + ++L + +M + G + + ++ +LSAC A
Sbjct: 114 NSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVA 148
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M GL + + L+ G G+ V GK +HG C + G ++ V ++L+DMY + G
Sbjct: 186 MVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGE 245
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD L K+ V WN LI +AR G EAL L KM+ +G T+ LL +
Sbjct: 246 LRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305
Query: 121 CPASESI 127
+ S+
Sbjct: 306 SSTTGSL 312
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A+ T LL ++ TG+ GK LH + ++ G V L+ MY K+G
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLS 119
+ +K+FD LV DVV N ++ YA++GL EA+ L ++M + ++ N TF+ +L+
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406
Query: 120 AC 121
AC
Sbjct: 407 AC 408
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G GK +H + + + L + +++ MY K G + R++FD + KDVV W +I
Sbjct: 105 GKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMI 164
Query: 84 GNYARNGLVGE---ALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y+++G AL L +M G++ N L+ C
Sbjct: 165 TGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+I + T++ +L A G +GK +H Y IG +L V LIDMY K G++
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAV 360
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F+ L KD++ WN +I A +G +AL + +M+ +G + + TFVG+LSAC
Sbjct: 361 VVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSAC 416
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-M 107
A+++ Y G V K+FD + +++V WN LIG Y +NGL E L ++M ++G +
Sbjct: 242 NAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHV 301
Query: 108 KTNSSTFVGLLSAC 121
N T V +LSAC
Sbjct: 302 IPNDFTLVAVLSAC 315
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS-LVDK 74
+LPA G + GK +H + I++ + ++++ ALIDMY K G + + R++FD+ K
Sbjct: 345 VLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSK 404
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D + W+ +I Y +G EAL +M QG+K + T VG+LSAC
Sbjct: 405 DAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSAC 451
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDT-GNFVVGKSLHGYCIQIGLS----SHLNVLTALIDMY 55
M G A A TV LLP D+ G F G+ LH Y ++ GL S +++ ++LIDMY
Sbjct: 223 MQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMY 282
Query: 56 VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTF 114
++ + R++FD + +++ +W +I Y +NG AL L ++M R ++ N +
Sbjct: 283 SRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSL 342
Query: 115 VGLLSAC 121
V +L AC
Sbjct: 343 VSVLPAC 349
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L+ T+ + +G+ + V+GK +HG ++IG S + V +++ MY++
Sbjct: 122 LLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAM 181
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALY-----LLQKMRIQGMKTNSSTFVGLLSA 120
K+FD + ++V +N +I A G + +LY ++M+ QG ++ T LL
Sbjct: 182 KVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPM 241
Query: 121 CPASE 125
C S+
Sbjct: 242 CCDSD 246
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
GL + T + +L A D G+ +H + V++ALI+MY K G H
Sbjct: 324 DGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHV 383
Query: 64 GRKIFDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+K+FD + D++ WN +I YA +G EA+ L KM+ G + N T+VGLL+AC
Sbjct: 384 AKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTAC 443
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G V R++FD + ++VV WN +I YA+NG EAL L ++M + M + ++ G
Sbjct: 213 KNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTG 272
Query: 117 LLS 119
+
Sbjct: 273 FIQ 275
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSST 113
+++ G ++ ++F ++ K+V+ W ++ Y ++GL EAL L KM+ G+K + T
Sbjct: 273 FIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGT 332
Query: 114 FVGLLSAC 121
FV +L AC
Sbjct: 333 FVTVLGAC 340
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
GL+ +T++ ++P G +G HG +++GL L V ++L+DMY K G +
Sbjct: 293 EGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCE 352
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACP 122
R +FD+ +K+V+ WN +IG Y+++ A LL+KM+++ +K N T + +L C
Sbjct: 353 ARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCE 411
Query: 123 AS 124
Sbjct: 412 EE 413
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A +GK LH + ++ L+ H V +LIDMY K G + + IFD + K
Sbjct: 610 LGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE 669
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN LI Y +G +A+ L + M+ G + +S TF+ LL+AC
Sbjct: 670 VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTAC 714
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
T+L +LP + F+ K +HGY ++ G + S V A + Y K G +H+ +F
Sbjct: 402 TLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCG 461
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ K V WN LIG + +NG +AL L MR G++ + T LLSAC +S+
Sbjct: 462 MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SGL T+ LL A + GK +HG ++ G + +L+ +YV+ G +
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILL 555
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ FD++ +K++V WN +I +++N +AL + +M + + + +G L AC
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGAC 613
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+++HG+ ++ + S + V ALI MY K G V K+FD + +++V WN ++
Sbjct: 214 LGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACL 273
Query: 88 RNGLVGEALYLLQKMR--IQGMKTNSSTFVGLLSAC 121
NG+ E+ L + + +G+ + +T V ++ C
Sbjct: 274 ENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLC 309
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV 72
+ +L + N + G +HGY ++ GL S + V +ALIDMY K G +H G +F ++
Sbjct: 309 IATVLASITQMANVLPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIML 368
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++++ +N +I Y +G +A + +M +G+ + TF LLSAC
Sbjct: 369 ERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSAC 417
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
+ A D+ +F + + +HG + +GL +AL+ Y K G+VH R++FD +V+ D+
Sbjct: 111 IRACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDL 170
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
VLWN LI Y +G+ + + MR+ G K + T GLL
Sbjct: 171 VLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLL 212
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL D+ +G+ LHG + GL S +V + L+ MY + + ++F + + D
Sbjct: 211 LLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPD 270
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNS 111
+V W+ LI Y++ G +AL +K+ ++ K +S
Sbjct: 271 LVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDS 306
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A + + ++G LH I+ G+++ + LT+L+DMY K G + +F+S+ DK+
Sbjct: 275 VLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKN 334
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V WN +IG YA +GL AL +M++ G + TFV +LSAC
Sbjct: 335 LVSWNAIIGGYASHGLATRALEEFDRMKVVGTP-DEVTFVNVLSAC 379
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T L++ YVK V+ R +FD + +++VV W +I Y +N +AL L M +
Sbjct: 207 TTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETR 266
Query: 109 TNSSTFVGLLSACPASESI 127
N TF +L AC S S+
Sbjct: 267 PNHFTFSSVLDACAGSSSL 285
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S+ T + A +G LH + G S+ V A++ Y K+ + RK+F
Sbjct: 115 SSYTFTSVFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVF 174
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D + + VV WN +I Y NGL EA+ L +KM G+ +S+TFV + SAC
Sbjct: 175 DKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSAC 227
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ ++T + + A G+ +G ++ + G+ ++ + T+LI+M+ + G V
Sbjct: 212 GVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRA 271
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
R +FDS+ + +V+ W +I Y +G EA+ L +M+ + G+ N+ TFV +LSAC
Sbjct: 272 RAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSAC 329
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS- 70
T LL AA + N VGK H Y I+ G+ + + LIDMY K+G + +F+
Sbjct: 428 TATALLSAASNLRNLYVGKQTHAYLIRRGIQFE-GMESYLIDMYAKSGSIRTAELLFEQN 486
Query: 71 -LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+D WN +I Y +NGL +A+ LL++M +Q + N+ T +L AC
Sbjct: 487 CSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPAC 538
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +I +A T+ +LPA G+ + + LHG+ I+ L ++ V T+L D Y K G
Sbjct: 519 MLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGA 578
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F +K+ V + ++ Y ++G+ AL L M G++ ++ TFV +LSA
Sbjct: 579 ISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSA 638
Query: 121 C 121
C
Sbjct: 639 C 639
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L +L A + + H + I+ S + +L A++ MY + V K+FD +
Sbjct: 327 TLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKM 386
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+++D V WN +I + +NG EAL L+ +M+ Q +S T LLSA
Sbjct: 387 LERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSA 435
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKS---LHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+G +T++ LL A NF +G+ LHG GL +L ++T L+++Y K G
Sbjct: 244 NGFFPDDATMVSLLQACE---NFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGR 300
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLS 119
++ RK+F+ + D V W ++ YA +G EA+ +++ R +GM+ + TF LLS
Sbjct: 301 LNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLS 360
Query: 120 ACPAS 124
AC S
Sbjct: 361 ACSHS 365
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 20 AGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD--KDVV 77
A D G +V H +++GL + V+ AL++MY K G V ++F + + K +V
Sbjct: 162 ACDEGYYV-----HCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIV 216
Query: 78 LWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN ++ A+NG+ EA MR+ G + +T V LL AC
Sbjct: 217 SWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQAC 260
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKT 109
L+ Y+K G +FD + KD V WN L+ A+ G +GE L + KM+ +K
Sbjct: 86 LVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKL 145
Query: 110 NSSTFVGLLSACPASES 126
N TF+ ++SAC + ++
Sbjct: 146 NEFTFLSVISACVSEKA 162
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + A++ T++ L+ G+ G+S+HG+ I+ G + ++ALIDMY K G
Sbjct: 432 MQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGK 491
Query: 61 VHWGRKIF-DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+H K+F + KDV+L N +I Y +G +AL + +M + +K N +TFV +L+
Sbjct: 492 IHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLT 551
Query: 120 ACPAS 124
AC S
Sbjct: 552 ACSHS 556
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S+ T+ +L A G++G+ +G +H + + +G+ + VLT+L+DMY G
Sbjct: 234 GIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESA 293
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F+ + + ++ WN +I +NG+V E+ L K+ G +S T V L+ C +
Sbjct: 294 FLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQT 353
Query: 125 ESI 127
+
Sbjct: 354 SDL 356
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ T++ L+ T + GK LH I+ GL S+L + TA++DMY K G + +F
Sbjct: 339 DSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVF 398
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ ++V+ W ++ ++NG AL L +M+ + + NS T V L+ C
Sbjct: 399 RTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCC 451
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VG L ++ G H +V +++I+ VK G ++ R +FD + ++DVV WN +IG Y
Sbjct: 156 VGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYV 215
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ GL+ E + L +M G++ +S T +L AC S
Sbjct: 216 QEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGES 252
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
KS+H I+ S+ + T LI +Y G +++ K+FD ++ +L N ++G + +N
Sbjct: 57 KSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKN 116
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E L + M ++ ++ NS T V L AC
Sbjct: 117 MEYKEVPKLFKMMGLRDIELNSYTCVFGLKAC 148
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG + T+ L+ + +GK LH + I+ GL L V +L+DMY K GLV
Sbjct: 256 SGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQE 315
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYAR--NGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSA 120
RK+FD + + +V+ W L+ Y R G EA+ + M +Q G+ N TF G+L A
Sbjct: 316 ARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKA 375
Query: 121 CPA 123
C +
Sbjct: 376 CAS 378
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S+ T LL A G G+ +H ++IG + L+V ALI MY K G ++F
Sbjct: 466 SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVF 525
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + D +V+ W +I +A++G +AL L M G+K N T++ +LSAC
Sbjct: 526 NDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSAC 578
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 24 GNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVK---TGLVHWGRKIFDSLVDKDVVLW 79
G F G L G+ ++ G SH+ V LIDM+VK + RK+FD + +K+VV W
Sbjct: 170 GFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTW 229
Query: 80 NCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
+I A+ G EA+ L +M + G + T GL+S C
Sbjct: 230 TLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G TV+ +L A G+ GK +H G++ + VL+ LIDMY K G +
Sbjct: 272 DGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVN 331
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +F+S +++V WN +I +A NG E L L +M+ ++ ++ TF+ +LSAC
Sbjct: 332 ARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLSAC 389
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 12 TVLILLPAAGDTGNFVVG-KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
TV+ L A D+ F+ KSLH I+ G + + TA++ Y K G+V RK+FD
Sbjct: 52 TVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDL 111
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ +++VV WN +IG Y RNG AL ++M
Sbjct: 112 MPERNVVTWNAMIGGYLRNGDAKSALLAFEEM 143
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ +TV+ +L A G N +G+ + ++ G ++ V AL+DMYVK G
Sbjct: 206 MVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGE 265
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R + + + +KDVV W LI Y NG AL L + M+++G+K N + LLSA
Sbjct: 266 MEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSA 325
Query: 121 C 121
C
Sbjct: 326 C 326
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLVD 73
LLPA + ++H Y +++G L V + L+D+Y K G + + +IFD L D
Sbjct: 423 LLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKD 482
Query: 74 KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
KD+++W +I Y ++G A+ L +M G K N TF +L AC
Sbjct: 483 KDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHAC 530
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + +V LL A GD + GK LH + I+ + S + + TALIDMY K
Sbjct: 307 MQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNE 366
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+F K WN ++ + N L A+ L ++M ++ ++ +S TF LL A
Sbjct: 367 GNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPA 426
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T I++ A + +G +HG + G + V +L+ MY+ G R +F+ +
Sbjct: 116 TYPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELM 175
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ VV WN LI RN +AL + +M +G+ + +T V +L AC
Sbjct: 176 QERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQAC 225
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTG 59
M + G++ A T + A + G G+ HG + +G S V T ++DMY K G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R +FD ++DKDVVL+ LI Y ++GL GEAL + + M +K N T +L
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 120 AC 121
+C
Sbjct: 212 SC 213
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H +++G+ + V ALI +Y K G V R +FDSL + D+V N +I YA+
Sbjct: 323 GEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQ 382
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L ++++ G++ N TF+ +L AC
Sbjct: 383 NGFGHEALELFERLKKLGLEPNVVTFISILLAC 415
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + + T+ +L + G+ G+ V GK +HG ++ GL S + T+L+ MY K +
Sbjct: 194 MVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNM 253
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V K+F+SL V W I +NG AL + ++M + N T +L A
Sbjct: 254 VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHA 313
Query: 121 CPA 123
C +
Sbjct: 314 CSS 316
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 2 CWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGL 60
C++ LIA + + + KSLH + ++ G L S LID Y+K +
Sbjct: 3 CYTSLIAQCT----------NKKSLTTLKSLHTHILKSGSLFSFFG--HKLIDGYIKCSV 50
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RK+FD + ++ +V WN +I ++ G EA+ L M +G+ ++ TF + A
Sbjct: 51 ITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKA 110
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H ++ L V + LI MYVK G + + IF+ + KDVV+WN +I Y++
Sbjct: 354 GRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQ 413
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+GL EAL + M G++ + TF+G+LSAC S +
Sbjct: 414 HGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKV 452
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 48 LTALIDMYVKTGL---VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
+ A +M ++ GL +H R +F+ + ++D WN +I + R GL EAL L +M+
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Query: 105 QGMKTNSSTFVGLLSACPASESI 127
+G+ N + + +LS C + S+
Sbjct: 329 EGVALNFPSMISVLSVCASLASL 351
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
+ + T++ +L A GK +H Y ++ GL S L VL LI MY + G + G++
Sbjct: 279 VPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR 338
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD + +DV+ WN LI Y +GL +A+ + + M +G+ + TF+ +L AC
Sbjct: 339 VFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCAC 393
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H + ++ G H++V+T L+D+Y + G V + +F ++ DK++V W+ +I YA+
Sbjct: 198 GKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAK 257
Query: 89 NGLVGEALYLLQKMRIQGMKT--NSSTFVGLLSAC 121
N + +AL L Q M ++ T N T V +L AC
Sbjct: 258 NEMPMKALELFQIMMLEACDTVPNPITMVSVLQAC 292
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+ T +L+ + + + G +H + GL + T LI+MY G V K+
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
FD +K + +WN + A + L L +M G+ +N T+ +L AC SE
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSE 189
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A G+ GK +H G++ + VL+ LIDMY K G + R +F+S
Sbjct: 280 TVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESC 339
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++V WN +I +A NG E L L +M ++ ++ TF+ +LSAC
Sbjct: 340 NERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLSAC 389
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 12 TVLILLPAAGDTGNFV-VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
TV+ L A D+ F+ KSLH I+ G + + TA++ Y K G+V RK+FD
Sbjct: 52 TVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDL 111
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ +++ V WN +IG Y RNG AL ++M
Sbjct: 112 MHERNDVTWNAMIGGYLRNGDAKSALLAFEEM 143
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTG 59
M + G++ A T + A + G G+ HG + +G S V T ++DMY K G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R +FD ++DKDVVL+ LI Y + GL GEAL + + M +K N T +L
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 120 AC 121
+C
Sbjct: 212 SC 213
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H +++G+ + V ALI +Y K G V R +F+SL + DVV N +I YA+
Sbjct: 323 GEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQ 382
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L ++M+ G K N TF+ +L AC
Sbjct: 383 NGFGHEALELFERMKKLGHKPNVVTFISILLAC 415
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + + T+ +L + G+ G+ V GK +HG ++ GL S + T+L+ MY K +
Sbjct: 194 MVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNM 253
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V K+F+SL V W I +NG AL + ++M + N TF +L A
Sbjct: 254 VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHA 313
Query: 121 CPA 123
C +
Sbjct: 314 CSS 316
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 30 KSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
KSLH + ++ G L S LID Y+K ++ RK+FD + ++ +V WN +I ++
Sbjct: 21 KSLHTHILKSGSLFSFFG--HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVS 78
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
G EA+ L M +G+ ++ TF + A
Sbjct: 79 RGKTKEAIELYDNMLFEGVLPDAYTFSAIFKA 110
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH-LNVLTALIDMYVKTG 59
MC+ G+ A+ T LL F G+ +H +++G + + V AL+D Y G
Sbjct: 195 MCFEGVEANGVTFCYLLRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCG 254
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
RK F+ + +DV+ WN ++ YA N LV +AL M++ G + + +F+G L+
Sbjct: 255 CFVSARKCFEGIKVEDVISWNSMVSVYADNNLVNDALEFFNFMQMWGHRPSVRSFIGFLN 314
Query: 120 ACPASESI 127
C ++ I
Sbjct: 315 LCSRNKEI 322
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 4 SGLIASASTVLILLPA--AGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLV 61
GL+ TV L A + +F +SLH + ++ G+ VL +L+D Y + G
Sbjct: 402 EGLMPDEVTVSTTLKALSVSASASFTSSQSLHCFALKSGVEGDTTVLCSLMDAYSRCG-- 459
Query: 62 HW--GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
HW +IF+++ + + + +I YARNG+ E L LL M +G+K + TF+ L+
Sbjct: 460 HWELSHRIFETIPTPNAICFTSMINGYARNGMGKEGLLLLHAMIEKGVKPDEVTFLCALT 519
Query: 120 AC 121
C
Sbjct: 520 GC 521
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A+T ++ + G G +H ++ G +++ V AL+ Y+ GL K+F
Sbjct: 100 TATTFASVVALCTNNGFCREGSQVHSRVVKFGFLNNVFVGGALVGFYMNLGLSGVALKLF 159
Query: 69 DSLVDKDVVLWNCLIGNYARNGL--VGEALYLLQKMRIQGMKTNSSTFVGLLSACPASES 126
D L ++++ +WN + + G V E L +M +G++ N TF LL C +
Sbjct: 160 DELSERNLGVWNVMFRGFCEMGCVEVEELLGFYARMCFEGVEANGVTFCYLLRGCSSKRR 219
Query: 127 I 127
Sbjct: 220 F 220
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 67/118 (56%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG +VL ++ A+G + N + G +H Y I+ G+ S++++ +LIDMY K V +
Sbjct: 346 SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F+ + +KD++ W +I YA+N +AL LL+K++++ M + +L AC
Sbjct: 406 MGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ A T +L A G +G +HG ++ G + V ALI MY K G +
Sbjct: 143 GVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGA 202
Query: 65 RKIFDS-LVDKD-VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FDS L++KD V WN +I + G EAL L ++M+ G+++N+ TFV L AC
Sbjct: 203 RVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC 261
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L AA + GK +HG+ I+ G + +L+DMY + G + R IF+ +
Sbjct: 555 TLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYV 614
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+D++LW +I +G +A+ L KM + + + TF+ LL AC S
Sbjct: 615 KQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHS 667
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
ILL +G ++ K +HGY ++ GL+ L + A++++Y + LV + R +F+S+ K
Sbjct: 459 ILLACSGLKSEKLI-KEIHGYVLKGGLADIL-IQNAIVNVYGELALVDYARHVFESINSK 516
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D+V W +I NGL EAL L + ++ + T V +L A A S+
Sbjct: 517 DIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 29 GKSLHGYCIQIGLSSHLNVL---TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
G+ LH + ++ ++L+ + T + MY K G + K+FD + ++ + WN +IG
Sbjct: 65 GQQLHAHFLKT--QNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGA 122
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G EA+ L ++MR+ G+ ++ TF +L AC A
Sbjct: 123 CVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGA 160
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ ++ T + L A +G+ +H ++ + + V ALI MY G +
Sbjct: 246 GVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++F S++ KD V WN L+ +N + +A+ Q M+ G K + + + +++A
Sbjct: 306 ERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL + I+L A + GK +H C++ G S V TALIDMY K G +
Sbjct: 438 GLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDA 497
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F L + D + W +I A+NG EA+ LL KM G K N T +G+L+AC S
Sbjct: 498 LSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHS 557
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL T +L A G + ++G+ +H Y I+ G S ++ALIDMY L+
Sbjct: 231 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 290
Query: 65 RKIFD-----SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KIFD S V + + LWN ++ + NG EAL ++ M G++ + TF +L
Sbjct: 291 TKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLK 350
Query: 120 AC 121
C
Sbjct: 351 IC 352
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G N +GK +H + Q L + ++ AL+DMYVK G + +++F + K+
Sbjct: 111 VLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKN 170
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
WN LI YA+ GL+ +A+ L KM + + +S GL+
Sbjct: 171 ATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLV 213
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ T I+L + N + +HG+ I G V + LID+Y K G
Sbjct: 333 MHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGS 392
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++ ++F+ L DKDVV W+ LI AR G A L M G++ + +L A
Sbjct: 393 INNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKA 452
Query: 121 CPA 123
C +
Sbjct: 453 CSS 455
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
KSLH + I+ G +H+ +L +I +Y K + R +FD + +++V W ++
Sbjct: 22 AKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTN 81
Query: 89 NGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
+ + EAL L +M + + N + +L AC
Sbjct: 82 SSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC 115
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S + T ++ A G N + K +H +G L + ++LI +Y G +H
Sbjct: 171 SNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHD 230
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +FD L +D +LWN ++ Y +NG AL Q+MR +K NS +FV LLS C
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVC 288
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 55/116 (47%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+ + LL G G LHG I+ G S V +I MY K G + RKIFD +
Sbjct: 280 SFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIM 339
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D V WN LI Y +NG EA+ L + M G+K +S TF L + S S+
Sbjct: 340 PQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG + ++ L A + GK LH + ++ S V + LIDMY K G +
Sbjct: 575 SGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLAL 634
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD + K+ V WN +I Y +G E L L +M G++ + TF+ ++SAC
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSAC 692
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G++ + T+ +LPA + +GK LH ++ GL + V +++ MY K+G +
Sbjct: 474 EGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDL 533
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ F + KD V WN +I ++++NG A+ L ++M G K +S + LSAC
Sbjct: 534 AYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSAC 591
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG+ + T LP+ +G+ K +H Y ++ G+ + + +AL+D+Y K G
Sbjct: 370 MVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGD 429
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V K F DV + +I Y NGL EAL L + + +GM N T +L A
Sbjct: 430 VEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPA 489
Query: 121 CPASESI 127
C A S+
Sbjct: 490 CAALASL 496
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + + + GK +H ++ G + + L+DMY K G + +FD + KD
Sbjct: 261 VLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKD 320
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK--TNSSTFVGLLSAC 121
V+ W C+I Y RNG EA+ L KM G + NS TF+ +LSAC
Sbjct: 321 VISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSAC 368
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK LH I+ G S TAL+DMY + G ++ K+FD ++ +DVV WN L+ +
Sbjct: 76 LGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFL 135
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R G EA+ +L++M + ++ + T +L C +
Sbjct: 136 RCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCAS 171
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GKS+HGY ++ G ++ + AL++MY K G++ + + + ++DV W +I R
Sbjct: 187 GKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVR 246
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EAL + +KM++ G+K N TF G+LSAC
Sbjct: 247 CGFNKEALVVFEKMQMDGVKPNELTFTGVLSAC 279
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M W+G+ TV +LPA D + GK++HG+ ++ G+ ++ V AL+++Y K
Sbjct: 153 MGWNGVKLDPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVCNALVNLYAKCLC 212
Query: 61 VHWGRKIFDSLVDKDVVLWN---------------CLIGNYARNG-----LVGEALYLLQ 100
V IFD + +DVV W+ L R+G + +A+ +L+
Sbjct: 213 VREAHAIFDLMPHRDVVSWSGVLTYFTNKEYEKGLSLFSQMCRDGVETNEVTWKAMEMLR 272
Query: 101 KMRIQGMKTNSSTFVGLLSACPASESI 127
KM+ G K N T +L AC SES+
Sbjct: 273 KMQNMGFKPNEITISSILQACYLSESL 299
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 62 HWGR-KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
HW +FD + KDVV W +I A +G EAL+L +KM + +K +S TF+ +LS+
Sbjct: 312 HWKVWNVFDMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPDSVTFICVLSS 371
Query: 121 CPAS 124
C S
Sbjct: 372 CSHS 375
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G +++ T +LL A G LH ++G+ + + V ALI+MY K G
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGC 378
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F + ++D++ WN +I Y+++GL +AL L Q M G N TFVG+LSA
Sbjct: 379 IDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSA 438
Query: 121 C 121
C
Sbjct: 439 C 439
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ + T + ++ G + +G +H ++ GL+ + V + L+DM+ K G
Sbjct: 218 MVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGD 277
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V RK+FD L +++VV+W L+ Y +NG E L LL M +G +N TF LL+A
Sbjct: 278 VLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNA 337
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 21 GDTGNFVVGKSLHGYCIQIGLSS------HLNV--LTALIDMYVKTGLVHWGRKIFDSLV 72
+T N GKS+H + SS N+ L +LI++YVK + R +FD +
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+ VV +N L+G Y +G E + L + M + N F +LSAC S
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHS 134
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV--- 72
+L A +G G HG+ + GL H V ++L+ MY K V ++ +S
Sbjct: 127 VLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNI 186
Query: 73 --DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D D +N ++ +G +GEA+ +L +M +G+ +S T+V ++ C
Sbjct: 187 DNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC 237
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A G F GK +H Y ++ G+S + A++DMYV+ G + + K F S
Sbjct: 504 TLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFS- 562
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+D+DV WN L+ YA G A L ++M + N TF+ +L AC S
Sbjct: 563 IDQDVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRS 615
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M W G+ T +L G + V G+ +H + ++ G S ++V+ ALI MY K G
Sbjct: 191 MLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGD 250
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD + KD + WN +I NG E L L +M + + T +++A
Sbjct: 251 IDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITA 310
Query: 121 C 121
C
Sbjct: 311 C 311
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++ A G+ +G+ +HGY ++ S +V +LI MY GLV K+F
Sbjct: 303 TMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQT 362
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+DVV+W +I Y N + +AL + M +G+ + T +LSAC
Sbjct: 363 ECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSAC 412
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+I T+ ++L A + G +LH + GL ++ V LIDMY K +
Sbjct: 397 GIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKA 456
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F S+ DK+++ W +I N +AL+ ++M ++ K N T V +LSAC
Sbjct: 457 LEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEM-MRRQKPNWVTLVCVLSAC 512
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
G + Y + + +HL+V L+ M+VK G + +F + ++++ WN L+G Y
Sbjct: 116 GSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGY 175
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A+ G EAL L +M G++ + TF +L C
Sbjct: 176 AKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTC 210
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 9 SASTVLILLPAAGDTGNFVV---GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
S + L+L G N V GK +H I +G S L + AL+DMY K V +
Sbjct: 240 SIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAK 299
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF + KDVV W +I A++GL EAL L M + G+K N TFVGL+ AC
Sbjct: 300 YIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYAC 355
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK LH + V ++L+DMY K L +GR +FDS+ + + W +I YA
Sbjct: 129 LGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYA 188
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
R+G EAL L ++ + + ++ GL+ + A++++
Sbjct: 189 RSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDAL 228
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
N + K LH I+ GL+ H LID Y K GL+ K+FD+L +D V W ++
Sbjct: 23 NPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLS 82
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ L +A + + +G++ + F L+ AC
Sbjct: 83 ACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKAC 119
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T +L A G +H ++ L S + V +AL+DMY K G + + + F+ +
Sbjct: 646 TFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 705
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ WN +I YAR+G +AL + +M+ G + TFVG+LSAC
Sbjct: 706 PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSAC 755
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ S +V+ L + G +G+ +HG + GL ++V AL+ +Y +T
Sbjct: 431 MKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDS 490
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYAR-NGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
++ +K+F + + D V WN IG A+ V +AL +M G + N TF+ +L+
Sbjct: 491 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILA 550
Query: 120 A 120
A
Sbjct: 551 A 551
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 32 LHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGL 91
LH + G + + LI++YV+ G + RK+FD + K++V W+CLI Y +N +
Sbjct: 45 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 104
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA L + + G+ N L AC
Sbjct: 105 PDEACSLFKGVISSGLLPNHFAVGSALRAC 134
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 9 SASTVLILLPAAGDTGNFVVGK----SLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVHW 63
++ ++++LL + N GK +H Y + GL + +++ AL++MY K +
Sbjct: 333 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDN 392
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+F + KD V WN +I N EA+ M+ GM ++ + + LS+C +
Sbjct: 393 ACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSS 452
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ---IGLSSHLNVLTALIDMYVK 57
M G++ T++ +L A G +G +H Y + I LS L A++DMY K
Sbjct: 368 MMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE--NAIVDMYAK 425
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G + ++F ++ +++++ WN +I YA NG +A+ + +MR G + N+ TFV L
Sbjct: 426 CGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSL 485
Query: 118 LSAC 121
L+AC
Sbjct: 486 LTAC 489
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 35 YCI--QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
YC+ ++G L V LI Y + GL+ R++FD DKDVV W +I YA +
Sbjct: 167 YCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCS 226
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA+ + + M + ++ N T + ++SAC
Sbjct: 227 EEAMEVFELMLLSHVEPNEVTLIAVVSAC 255
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 31/141 (21%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ ++ A D GN +GK +H + + L++ AL+DMYVK + R++FD +
Sbjct: 247 TLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRM 306
Query: 72 VDKDV-------------------------------VLWNCLIGNYARNGLVGEALYLLQ 100
KDV V W+ +I Y++N E+L L
Sbjct: 307 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 366
Query: 101 KMRIQGMKTNSSTFVGLLSAC 121
+M +G+ T V +LSAC
Sbjct: 367 EMMERGVVPIEHTLVSVLSAC 387
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+++T+ LL A G+ LH + +++G + V TALIDMY + G + +
Sbjct: 563 PNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNV 622
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
F+ + +K + WNC++ YA + E + L KMR + ++ ++ TF LLSAC S
Sbjct: 623 FNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNS 679
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + +V L A + G F +GK +HGY ++ L+ + V T+L+DMYVK +
Sbjct: 389 GFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKA 448
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ + +K+V WN LI Y+ G GEA+ LL +M +G+ + T+ GL+S
Sbjct: 449 QAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVS 503
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A+ T + +L A G GK LHGY ++ GL S+ V ++I MY + R +
Sbjct: 253 ATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAV 312
Query: 68 FDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQK-MRIQGMKTNSSTFVGLLS 119
FDS+ D +++ WN +I +YA +G + +AL ++ M G+K + T+ +LS
Sbjct: 313 FDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILS 367
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
++ TV ++ A + G GK +H Y +IGL V ++LIDMY K+G +
Sbjct: 379 IVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDAL 438
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
IF+ + + +VVLW +I A +G EA+ L + M G+ N TFVG+L+AC
Sbjct: 439 MIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNAC 494
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + T+ +L N GK +H + ++ G+ + + +++D+Y+K
Sbjct: 125 MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKE 184
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ F+ +++KDVV WN +IG Y R G V ++L + +
Sbjct: 185 FEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
++LHG+ + G LN L+ +YVK+ + K+FD + K+ W LI +AR
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 90 GLVGEALY-LLQKMRIQGMKTNSSTFVGLLSACPASESI 127
E ++ L ++M+ G N T +L C +I
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNI 150
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A T +LPA GD ++G+ +H Y + L +L + +LIDMY + G + +++
Sbjct: 286 PDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRV 345
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
FD + +DV W LI Y G A+ L +M G +S FV +LSAC S
Sbjct: 346 FDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHS 402
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G T +L A + N G +HG +++GL +L V LI MY K G +
Sbjct: 114 GFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEA 173
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R++FD ++ KDVV WN ++ YA N +AL + ++M G K + T L+ A +
Sbjct: 174 RRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANT 233
Query: 125 ES 126
S
Sbjct: 234 SS 235
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K LH + + ++ L+ Y G RK+FD + D++VV +N +I +Y N
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ L + ++M G + ++ T+ +L AC SE++
Sbjct: 98 HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENL 135
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 34/142 (23%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST+LIL A G +G+ +HG+ ++ G S++ V + L+DMY K G++ RK+FD
Sbjct: 156 STLLIL---ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 212
Query: 71 LVDKDVVLWNCL-------------------------------IGNYARNGLVGEALYLL 99
L +K+VV++N L I + +NGL +A+ +
Sbjct: 213 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 272
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
++M+++ ++ + TF +L+AC
Sbjct: 273 REMKLENLQMDQYTFGSVLTAC 294
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G H + GL S + V AL+ +Y K G + ++F+ + KD V W L+ YA+
Sbjct: 404 GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQ 463
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G E + L + M G+K + TF+G+LSAC
Sbjct: 464 FGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 496
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+ W +S++ LL +T NF K+LH + I+ +L LI Y K G
Sbjct: 9 LVWLRHCSSSNHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGS 68
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNS 111
+ + K+FD + ++ WN ++ Y++ G V E YL M R G+ NS
Sbjct: 69 IPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS 120
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H Y I+ ++ V +AL+ MY K + +F + K+VV W ++ Y +
Sbjct: 303 GKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ 362
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EA+ M+ G++ + T ++S+C
Sbjct: 363 NGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 395
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 34/142 (23%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST+LIL A G +G+ +HG+ ++ G S++ V + L+DMY K G++ RK+FD
Sbjct: 156 STLLIL---ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 212
Query: 71 LVDKDVVLWNCL-------------------------------IGNYARNGLVGEALYLL 99
L +K+VV++N L I + +NGL +A+ +
Sbjct: 213 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 272
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
++M+++ ++ + TF +L+AC
Sbjct: 273 REMKLENLQMDQYTFGSVLTAC 294
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G H + GL S + V AL+ +Y K G + ++F+ + KD V W L+ YA+
Sbjct: 404 GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQ 463
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G E + L + M G+K + TF+G+LSAC
Sbjct: 464 FGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 496
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
+ W +S++ LL +T NF K+LH + I+ +L LI Y K G
Sbjct: 9 LVWLRHCSSSNHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGS 68
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNS 111
+ + K+FD + ++ WN ++ Y++ G V E YL M R G+ NS
Sbjct: 69 IPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS 120
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H Y I+ ++ V +AL+ MY K + +F + K+VV W ++ Y +
Sbjct: 303 GKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ 362
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EA+ M+ G++ + T ++S+C
Sbjct: 363 NGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 395
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G A+ T++ +L A G G+ +H Y I L + + T+L+DMY K G +
Sbjct: 241 GPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEA 300
Query: 65 RKIFD--SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F S DV +WN +IG A +GLV E+L L ++M++ G++++ T++ LL+AC
Sbjct: 301 LFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAAC 359
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
+++D Y K G + +K+F+S+ ++DV W+ I Y + G EA+ + +KMR G K
Sbjct: 184 NSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPK 243
Query: 109 TNSSTFVGLLSAC 121
N T V +LSAC
Sbjct: 244 ANEVTMVSVLSAC 256
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 34/142 (23%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST+LIL A G +G+ +HG+ ++ G S++ V + L+DMY K G++ RK+FD
Sbjct: 147 STLLIL---ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 203
Query: 71 LVDKDVVLWNCL-------------------------------IGNYARNGLVGEALYLL 99
L +K+VV++N L I + +NGL +A+ +
Sbjct: 204 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
++M+++ ++ + TF +L+AC
Sbjct: 264 REMKLENLQMDQYTFGSVLTAC 285
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G H + GL S + V AL+ +Y K G + ++F+ + KD V W L+ YA+
Sbjct: 395 GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQ 454
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G E + L + M G+K + TF+G+LSAC
Sbjct: 455 FGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 487
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G GK +H Y I+ ++ V +AL++MY K + +F + K+
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKN 340
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W ++ Y +NG EA+ M+ G++ + T ++S+C
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 386
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL +T NF K+LH + I+ +L LI Y K G + + K+FD + +
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPN 74
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNS 111
+ WN ++ Y++ G V E YL M R G+ NS
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS 111
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 34/142 (23%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
ST+LIL A G +G+ +HG+ ++ G S++ V + L+DMY K G++ RK+FD
Sbjct: 147 STLLIL---ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDE 203
Query: 71 LVDKDVVLWNCL-------------------------------IGNYARNGLVGEALYLL 99
L +K+VV++N L I + +NGL +A+ +
Sbjct: 204 LPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263
Query: 100 QKMRIQGMKTNSSTFVGLLSAC 121
++M+++ ++ + TF +L+AC
Sbjct: 264 REMKLENLQMDQYTFGSVLTAC 285
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G H + GL S + V AL+ +Y K G + ++F+ + KD V W L+ YA+
Sbjct: 395 GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQ 454
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G E + L + M G+K + TF+G+LSAC
Sbjct: 455 FGKANETIGLFESMLAHGLKPDKVTFIGVLSAC 487
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G GK +H Y I+ ++ V +AL++MY K + +F + K+
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKN 340
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W ++ Y +NG EA+ M+ G++ + T ++S+C
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 386
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL +T NF K+LH + I+ +L LI Y K G + + K+FD + +
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPN 74
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNS 111
+ WN ++ Y++ G V E YL M R G+ NS
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNS 111
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A G+ + + + Y + + V T LIDMY K G V R +FD KDVV+
Sbjct: 357 ACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVM 416
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
W+ +I Y +G EA+YL M+ +G+ N TF+GLL+AC S
Sbjct: 417 WSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHS 462
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M W GL T +L A + +F + +H + I G SH+ V L+ +Y K G
Sbjct: 136 MKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGR 195
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R +FD L D+ +V W ++ Y +NG EAL + +MR +K + + V ++ A
Sbjct: 196 IGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRA 255
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+++ ++ A D + G+SLHG I++GL ++L +L Y K G V + FD +
Sbjct: 248 SLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKM 307
Query: 72 -VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V++WN +I YA+NG EA+ L Q M + +K +S T + AC
Sbjct: 308 KTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLAC 358
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+H + GL + ++T L++ G + + RK+FD D D+ +WN +I Y+RN
Sbjct: 65 QVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNN 124
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + + + M+ G+ + TF +L AC
Sbjct: 125 MYRNVIEMYRWMKWVGLHPDKFTFPCVLKAC 155
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 31/125 (24%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG----------------LVHW-------- 63
+G+S+HG +IG+ ++++ ALI +Y G LV W
Sbjct: 326 MGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYL 385
Query: 64 -------GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
+K+FDS+V+KDVV W+ +I YA++G EA+ L Q+M++ G++ + + V
Sbjct: 386 MCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVS 445
Query: 117 LLSAC 121
++SAC
Sbjct: 446 VISAC 450
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + ++ ++ A +GK +H Y + + ++ + T L+DMY+K G V
Sbjct: 435 GIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENA 494
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F ++ +K V WN LI A NGLV ++L + M+ N TF+G+L AC
Sbjct: 495 LEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGAC 551
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H + ++ G S + V LI++Y G + K+F V D+V WN L+ Y
Sbjct: 164 GKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVN 223
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFV 115
G V EA + KM ++ ++S V
Sbjct: 224 LGDVVEAECVYDKMPVRNTIASNSMIV 250
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
++I ++ K G + R +FD + KD+V W+ +I Y +NG+ EAL L M G+
Sbjct: 246 NSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVM 305
Query: 109 TNSSTFVGLLSAC 121
+ V +SAC
Sbjct: 306 VDEVVVVSAISAC 318
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK LH + I+ G S + + +++IDMY K G + K+FD + + V +N +I YA
Sbjct: 532 GKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAH 591
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G +A+ +L K+ G+ N TF+ L+SAC
Sbjct: 592 HGKAQQAIEVLSKLEKNGVAPNHVTFLALMSAC 624
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+H I S ++ L+ Y K+ H+ K+FD + +++VV W LI ++ + G
Sbjct: 28 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 87
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
V +A + MR+ + N +TF LL AC E
Sbjct: 88 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRE 122
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL-VHWGRKI 67
+ +T +LL A + + VG +HG ++ GL ++L+ MY+K G + ++
Sbjct: 107 NENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRV 166
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
F L+++DVV WN +I +A+NG L +M QG+K + TF LL C
Sbjct: 167 FYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCC 221
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+HG + G + V +A++D+Y K V RKIFDS+ KD +W+ +I Y N
Sbjct: 229 QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNN 288
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
EA+ + M Q +K + L AC E +
Sbjct: 289 RGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDL 325
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T++ +L + + G+ +H ++ L H V AL+ MY + + K F
Sbjct: 413 ATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVD 472
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V KD W+ +IG +N + +AL L ++M +G+ S + +SAC
Sbjct: 473 IVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISAC 523
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC + + L A + + G +HG I+ G + V + L+++Y G
Sbjct: 300 MCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGE 359
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGL-VGEALYLLQKM-RIQGMKTNSSTFVGLL 118
+ K+F + DKD+V WN +I AR G G + L Q++ R ++ +T V +L
Sbjct: 360 LGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVL 419
Query: 119 SACPASESI 127
+C +
Sbjct: 420 KSCEKDSDL 428
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G I + ST + AA + + G+S H I+ + V +LI Y K G
Sbjct: 283 MLREGFIPNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGS 342
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ IFD + ++VV WN +I YA NG EA+ L ++M +G+K N + +GLL A
Sbjct: 343 MKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLA 402
Query: 121 C 121
C
Sbjct: 403 C 403
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G VGK +HG I+ L S++ V +AL+D+YVK + +K F+ +VV + LI
Sbjct: 174 GKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLI 233
Query: 84 GNYARNGLVGEALYLLQKM 102
G Y ++G +AL + +M
Sbjct: 234 GGYLKSGRFEDALRVFNEM 252
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ ST L V+GK +HG ++ G + V AL++MY K G + +F
Sbjct: 361 NRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVF 420
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ + KD++ WN ++ YAR+G +AL + M+ G K + T VG+L AC
Sbjct: 421 ERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLAC 473
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
+I Y + G + R++FD + +D V W +I YA+ G + +++L KM+ G
Sbjct: 300 NTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKS 359
Query: 109 TNSSTFVGLLSAC 121
N STF LS C
Sbjct: 360 LNRSTFCCALSTC 372
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ 105
L+ +YV+ G + R++F+S VD +++ WNCL+G Y + ++G+A L M ++
Sbjct: 147 LLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVR 201
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYC-IQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+ STV+ +L A G+ +G +H Y +I L N+ AL++MYVK G + G K+
Sbjct: 258 NESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKV 317
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
F+ +V KDV+ W +I A NG + + + M + G+ + TF+GLLSAC
Sbjct: 318 FNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSAC 371
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQ-IGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+A T++ + A G GK++H Y ++ + + ++ A +D+Y K G R +
Sbjct: 155 NALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNV 214
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACPA 123
F + +DV+ W L+ YAR G GEA+ + ++M + G + N ST V +LSAC +
Sbjct: 215 FVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACAS 271
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQ---IGLSSHLNVLTALIDMYVK 57
M G++ T++ +L A G +G +H Y + I LS L A++DMY K
Sbjct: 318 MMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE--NAIVDMYAK 375
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G + ++F ++ +++++ WN +I YA NG +A+ + +MR G + N+ TFV L
Sbjct: 376 CGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSL 435
Query: 118 LSAC 121
L+AC
Sbjct: 436 LTAC 439
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 35 YCI--QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
YC+ ++G L V LI Y + GL+ R++FD DKDVV W +I YA +
Sbjct: 117 YCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCS 176
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA+ + + M + ++ N T + ++SAC
Sbjct: 177 EEAMEVFELMLLSHVEPNEVTLIAVVSAC 205
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + + T++ ++ A D GN +GK +H + + L++ AL+DMYVK
Sbjct: 186 MLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDC 245
Query: 61 VHWGRKIFDSLVDKDV-------------------------------VLWNCLIGNYARN 89
+ R++FD + KDV V W+ +I Y++N
Sbjct: 246 LVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQN 305
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E+L L +M +G+ T V +LSAC
Sbjct: 306 NKPKESLKLFHEMMERGVVPIEHTLVSVLSAC 337
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++A+ T+ +L + +G+ LH Y I+ + ++ V L++MY+K G+
Sbjct: 394 MQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGV 453
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+FD++ +D++ WN LIG Y +GL A+ +M G++ + TFV +LSA
Sbjct: 454 FEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSA 513
Query: 121 C 121
C
Sbjct: 514 C 514
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 63/116 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + T+ +++ + G+ + K +H + ++ G +H++V+ L+ MY K +
Sbjct: 121 GFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDA 180
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+FD +V + V+ WN L+ YA N A + ++M ++G++ N T+ LLS+
Sbjct: 181 CKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSS 236
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKT-- 58
M G+ S V ++L D GK +HG+ I+ G +L V ALI +Y K
Sbjct: 253 MRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKRE 312
Query: 59 --GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR 103
G H KIF + +K +V WN LI +YA +GL +A + K+
Sbjct: 313 DLGDAH---KIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLE 356
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV +L A G VG+++H Y + +++ + V ALIDMY K G V G +F+ +
Sbjct: 311 TVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEM 370
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D V W +I A NG AL L M +G++ TFVG+L AC
Sbjct: 371 GKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLAC 420
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M L + T LL A N V ++H +++G S L V ALI Y
Sbjct: 68 MYSQALFGNNLTYPFLLKACARISN-VSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCE 126
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + RK+FD + ++D+V WN LI Y R E L + ++MR+ +K ++ T V ++ A
Sbjct: 127 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 186
Query: 121 C 121
C
Sbjct: 187 C 187
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
A+I Y K G + RK+FD + +DV+ W +I +Y++ G G+A+ L Q+M + +K
Sbjct: 247 NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVK 306
Query: 109 TNSSTFVGLLSAC 121
+ T +LSAC
Sbjct: 307 PDEITVASVLSAC 319
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L L+ A+ + K +HGY ++ + SH + + LI+ Y + G + R +F ++
Sbjct: 190 TLLALVRASVSIAALNLIKEIHGYAMRNDIDSHPQLSSGLIEAYGRCGCLMDSRTVFKNM 249
Query: 72 --VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKDVV+W+ LI A +G EAL Q+M + G+K + TF+ +L AC
Sbjct: 250 RGCDKDVVVWSNLISACALHGEAKEALEFFQEMEVSGVKPDGITFLAVLKAC 301
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ ++ T+L +LP + K +H + ++ L S L+V LID Y K+G
Sbjct: 517 MQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGN 576
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + + IF+ L KD V WN ++ +Y +G AL L +MR QG++ N TF +L A
Sbjct: 577 LMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLA 636
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ + +L A G + G+ +H I+ G+ ++ +++ +Y K G
Sbjct: 174 MMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGE 233
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +KIFD + ++D V WN +I + +NG +G+A M+ G++ + T+ L+S
Sbjct: 234 MDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILIS 292
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLN--VLTALIDMYVKTGLVHWGRKIFD 69
T + LL + D +GK LH +IGL ++N V T L+ MY K GL+ RK+F+
Sbjct: 85 TYMNLLQSCIDKDCIFIGKELHS---RIGLVENVNPFVETKLVSMYAKCGLLGMARKVFN 141
Query: 70 SLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++ W+ +IG +RN GE + L M G+ + +L AC
Sbjct: 142 EMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQAC 193
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +H +++ L ++ V +LIDMY K G + + IFD + ++DV WN +IG Y
Sbjct: 372 MGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYF 431
Query: 88 RNGLVGEALYLLQKMRIQGMKTN 110
+ G G+A L KM+ N
Sbjct: 432 QAGFCGKAHELFMKMQESDSPPN 454
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G ++ ++ ++ A G + ++ Y GLS + + TA+IDMY K G V
Sbjct: 196 GFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSA 255
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R++FD + +K+V+ W+ +I Y +G EAL L M G+ N TFV LL AC S
Sbjct: 256 REVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHS 315
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++ A D + +G+ +H ++ GL V L+DMY K ++ RK+FD +
Sbjct: 103 TLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVM 162
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V KD+V W +IG YA E+L L ++R +G ++ V +++AC
Sbjct: 163 VSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEGFVSDKVAMVTVVNAC 211
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ S T ++L A G GK +H +Q G + V TAL+DMY K G
Sbjct: 106 MHQKGILPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGH 165
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
V R +FD +VD+DVV W +I YA+ G + +A +L M
Sbjct: 166 VCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNM 207
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 35 YCIQIGLSSHLNVLT-ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
Y I+ G ++++ ALI M K G + + F+ + ++D+ ++ +I +A +G
Sbjct: 334 YNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQ 393
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+A+ L KM+ +G+K N TFVG+L+AC S
Sbjct: 394 DAIDLFLKMQQEGLKPNQVTFVGVLNACSTS 424
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A + G +G+S+H ++ + ++ V +AL+DMY K G + ++F L +++
Sbjct: 316 VLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERN 375
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRI--QGMKTNSSTFVGLLSAC 121
+V WN +IG YA G + AL L ++M + G++ + T + +LS C
Sbjct: 376 LVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVC 423
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 27 VVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
+ GK +HG ++ G+ + V + DMY KTG +FD + +++ WN I N
Sbjct: 125 MTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNA 184
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ +A+ ++ + NS TF L+AC
Sbjct: 185 VQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNAC 219
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 270
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ ++ YA NG + L L +M + +K N T V +L AC
Sbjct: 271 SDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRAC 320
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K +F+ +
Sbjct: 312 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM 371
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 372 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 419
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G LH + I+ G ++ + +LI++Y K
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL L +M K N+ TF+ +LS
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 521
Query: 120 ACPAS 124
AC S
Sbjct: 522 ACSHS 526
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + V +ALID+Y K G ++ K+F
Sbjct: 109 SVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY 168
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW +I Y ++G AL +M + + + + T V + SAC
Sbjct: 169 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 219
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 270
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ ++ YA NG + L L +M + +K N T V +L AC
Sbjct: 271 SDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRAC 320
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K +F+ +
Sbjct: 312 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM 371
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 372 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 419
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G LH + I+ G ++ + +LI++Y K
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL L +M K N+ TF+ +LS
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 521
Query: 120 ACPAS 124
AC S
Sbjct: 522 ACSHS 526
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + V +ALID+Y K G ++ K+F
Sbjct: 109 SVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY 168
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW +I Y ++G AL +M + + + + T V + SAC
Sbjct: 169 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 219
>Medtr6g092170.1 | PPR containing plant-like protein | HC |
chr6:34743574-34742089 | 20130731
Length = 468
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G A S L LL D + +GK +H + + ++ + LI +YVK G V
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDA 153
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FD + D++V N +IG Y NGL + L + ++MR QG+ + TF +L+ C
Sbjct: 154 RKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDEETFALVLAVC 210
>Medtr6g091880.1 | PPR containing plant-like protein | HC |
chr6:34616147-34614592 | 20130731
Length = 446
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G A S L LL D + +GK +H + + ++ + LI +YVK G V
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDA 153
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
RK+FD + D++V N +IG Y NGL + L + ++MR QG+ + TF +L+ C
Sbjct: 154 RKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDEETFALVLAVC 210
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A G G +GK +HGY + G V AL+DMY K G + RK+F+
Sbjct: 245 TVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMD 304
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI--QGMKTNSSTFVGLLSAC 121
K + WN +I YA +G +A+ +KM G++ + TF+GLL+AC
Sbjct: 305 QRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNAC 356
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 47 VLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-- 104
V T L+ Y++ G V G +FD +VD+DV WN +I +NG E + L ++M
Sbjct: 169 VFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAA 228
Query: 105 --------QGMKTNSSTFVGLLSAC 121
+G K N T V +LSAC
Sbjct: 229 GLGEGGFCKGNKPNQVTVVCVLSAC 253
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 181 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 240
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ ++ YA NG + L L +M + +K N T V +L AC
Sbjct: 241 SDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRAC 290
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K +F+ +
Sbjct: 282 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM 341
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 342 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 389
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G LH + I+ G ++ + +LI++Y K
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 431
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL L +M K N+ TF+ +LS
Sbjct: 432 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 491
Query: 120 ACPAS 124
AC S
Sbjct: 492 ACSHS 496
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + V +ALID+Y K G ++ K+F
Sbjct: 79 SVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY 138
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW +I Y ++G AL +M + + + + T V + SAC
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 189
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 181 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 240
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ ++ YA NG + L L +M + +K N T V +L AC
Sbjct: 241 SDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRAC 290
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K +F+ +
Sbjct: 282 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM 341
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 342 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 389
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G LH + I+ G ++ + +LI++Y K
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSS 431
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL L +M K N+ TF+ +LS
Sbjct: 432 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILS 491
Query: 120 ACPAS 124
AC S
Sbjct: 492 ACSHS 496
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + V +ALID+Y K G ++ K+F
Sbjct: 79 SVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY 138
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW +I Y ++G AL +M + + + + T V + SAC
Sbjct: 139 PKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 189
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLVH 62
G T++ ++ A G G+ + LH Y Q + +L +LIDMY K G +
Sbjct: 193 GFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMD 252
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F ++ D++V W +I YA +G EAL MR G+K N TF+G+LSAC
Sbjct: 253 LAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSAC 311
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G++ T+ I+L A + +G+ +H Y I++GL S+ + I++Y K G
Sbjct: 88 MLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGD 147
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+FD + + WN LI ++ GL +A+ + M+ G + + T V ++SA
Sbjct: 148 FDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSA 207
Query: 121 C 121
C
Sbjct: 208 C 208
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+L ++ A G +H Y + G L+V ALIDMY K G + R++F+++
Sbjct: 356 TMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM 415
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+V+ W+ +I +A +G A+ L ++M+ ++ N TF+G+L AC
Sbjct: 416 PRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYAC 465
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A F G +HG ++G + T LI MY + R +FD + D
Sbjct: 127 LLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPD 186
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I Y +NG +AL L + MR MK +S +LSAC
Sbjct: 187 AVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSAC 232
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 31/137 (22%)
Query: 16 LLPAAGDTGNFVVGKSLH------GYCIQIGL-------------------------SSH 44
+L A G GN G+++H GY I L S H
Sbjct: 228 VLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKH 287
Query: 45 LNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
L V TA++ Y K G+V R IFD ++++D+V W+ +I YA + EAL L +M
Sbjct: 288 LIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQ 347
Query: 105 QGMKTNSSTFVGLLSAC 121
+ + T + ++SAC
Sbjct: 348 KRSVPDQITMLSVISAC 364
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ + T L + D+ +FV + ++ + I++G + + V +L+D+Y G
Sbjct: 100 MHKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGC 159
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD + +DVV W +I Y G +AL + ++M+ G+ N T V LSA
Sbjct: 160 LELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSA 219
Query: 121 CPASESI 127
C +S +I
Sbjct: 220 CASSCAI 226
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
TALIDMYVK G V G K+F + +K+V N +I A V EAL +M + G++
Sbjct: 249 TALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVR 308
Query: 109 TNSSTFVGLLSACPAS 124
+ T V +LSAC S
Sbjct: 309 ADEVTLVTVLSACSHS 324
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K +HGY I+ ++ V TA++D Y K G +H R++FD + +++W +I YA +
Sbjct: 413 KEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASH 472
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
G AL L +M +G++ + T +L+AC S
Sbjct: 473 GDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHS 507
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ +A T+ ++ A G + + G +H + G+ + + + A+I MY K G +++
Sbjct: 254 GILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYA 313
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
R++FD + +KD V + +I Y NG V EAL +L+ + G+ T + G++
Sbjct: 314 RELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQ 368
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
K +H + G S + VL AL+ Y + G + RK+FD + ++D+V WN +IG Y++
Sbjct: 174 AKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQ 233
Query: 89 NGLVGEALYLLQKM---RIQGMKTNSSTFVGLLSACPASESI 127
+G E L +M +G+ N+ T ++ AC S+ +
Sbjct: 234 SGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDL 275
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A+ TV +LP D + GK +HG+ ++ G+ + V +A ++ Y K V + +
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
FD + +DVV WN L Y G + L + ++M + G+K + T +LSAC
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G +T+ +L A + +GK +H Y + L AL+DMY K G +
Sbjct: 575 GFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLS 634
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R +FD + KDV WN +I +G EAL L +KM + +K +S+TF +LSAC S
Sbjct: 635 RNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHS 694
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+LPA + GK++HG+ ++ G+ + V TAL+++Y V + +FD + ++
Sbjct: 349 ILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRN 408
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV WN L Y G + L + ++M + G+K + T + +L AC
Sbjct: 409 VVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHAC 454
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ TV +L A D + GK++HG+ ++ G+ ++ V AL+++Y
Sbjct: 233 MVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLC 292
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V + +FD + ++V+ WN L Y G + L + ++M + G+K + +L A
Sbjct: 293 VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352
Query: 121 C 121
C
Sbjct: 353 C 353
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ T+L +L A D + GK +HG+ ++ G+ + V AL+ +Y K
Sbjct: 435 MVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC 494
Query: 61 VHWGRKIFDSLVDKDVVLWN-----------------------------------CLIGN 85
V + +FD + ++V WN +IG
Sbjct: 495 VREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGG 554
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+N + EA+ + +KM+ G K + +T +L AC SE +
Sbjct: 555 CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECL 596
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + + A + + + K H + G+ S +++ A I Y K V
Sbjct: 35 GIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGA 94
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R++FD LV +DVV WN L Y G + L + +KM + +K N T +L C
Sbjct: 95 RRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGC 151
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL + T+L++L + G+ +G+ +H Y + G ++ V T LIDMY K G +
Sbjct: 208 GLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDA 267
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + +D W+ +I YA +G +A+ +L +M+ + ++ + TF+G+L AC
Sbjct: 268 VNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYAC 324
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK LH + +++G+S ++ V+ LI+MY G + R++FD + + VV +N +I + AR
Sbjct: 131 GKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLAR 190
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
N EAL L ++++ G+K T + +LS+C
Sbjct: 191 NNRANEALALFRELQEIGLKPTDVTMLVVLSSC 223
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F +G+ + ++ + + + +ALIDMY K G V +++FD +++K+V W +I
Sbjct: 291 FEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDG 350
Query: 86 YARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
Y +NG EAL L +KM+I+ + N TF+ L+AC
Sbjct: 351 YGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTAC 387
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H + ++ G + N+ L+ +Y+K+ + + R++FD L D+ + +N +IG Y +
Sbjct: 56 GQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLK 115
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NG V E+L L ++ + G K + TF +L A
Sbjct: 116 NGQVDESLDLFHQLSVSGEKPDGFTFSMILKA 147
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
+I AST + GD +G+ +H ++ + + TALID YVK G V +GR
Sbjct: 143 MILKASTNRVSNGMVGD-----LGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGR 197
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQK 101
+FD + +K+V+ LI Y G +A Y+ +K
Sbjct: 198 TVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRK 233
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+ +L ++ A G +G +H + +++G+ + + TALI+MY + GL+ K+FD
Sbjct: 183 AIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDE 242
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +++VV W LI A +G EAL + +M+ G+K + + F+G+L AC
Sbjct: 243 MPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVAC 293
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 60/111 (54%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T++ +LPA + + G +H Y ++ G+ V LI +Y G + + +FD
Sbjct: 224 ATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQ 283
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ D++V++W+ +I Y +G EAL + +++ G+ + F+ LLSAC
Sbjct: 284 IPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSAC 334
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG + T +L A G + + G+ +HG ++ GL L V A + Y K
Sbjct: 111 MRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKE 170
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMK-TNSSTFVGLL 118
+ RK+FD ++++D+V WN ++ Y NG V EA+ L M R G+ +++T V +L
Sbjct: 171 IEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVL 230
Query: 119 SA 120
A
Sbjct: 231 PA 232
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTG--LVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
K H I G + LID Y + G V RK+FD L ++DV WN +I YA
Sbjct: 37 KQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYA 96
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
G EAL++ MR+ G N T+ +L AC A
Sbjct: 97 NMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGA 132
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
S ST +L A +F G+ LH + + ++ V TAL+D Y K G + ++ F
Sbjct: 432 SRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSF 491
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
S+ +V W LI YA +G EA+ + M QG+ N++TFV +LSAC
Sbjct: 492 TSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSAC 544
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 47/89 (52%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A G+ +GK +H + G V +AL+ YV+ + +F+ L D++
Sbjct: 110 LSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENH 169
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQ 105
VLW+ ++ Y + ++G+A+ + +KM ++
Sbjct: 170 VLWSLMLAGYVQRDMIGDAMEIFEKMPVR 198
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ I++ + GK H ++ G + L +AL++ Y K G + R +FD +
Sbjct: 327 TISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKM 386
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
K+++ WN LI Y +G EA+ + +KM + M N TF+ +LSAC S
Sbjct: 387 HRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYS 439
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 48/94 (51%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VG+ +H ++ ++ V ALIDMY K G + R +FD + K V WN +I YA
Sbjct: 242 VGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYA 301
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EAL + KMR G K + T +++ C
Sbjct: 302 FRGFSEEALGIYYKMRDSGTKIDHFTISIVITIC 335
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCI-QIGLSSHLNVLTALIDMYVKTGLVHW 63
G S T+ +L A +G+ VG+ +H Y + ++GL + V T+L+DMY K G ++
Sbjct: 251 GFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINA 310
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+F S++ ++VV WN ++G A +G+ A+ + M ++ +K + TF+ LLSAC
Sbjct: 311 ALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSH 369
Query: 124 S 124
S
Sbjct: 370 S 370
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 32/133 (24%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK-------------------------- 57
G+ VG +H ++ G V AL+++YVK
Sbjct: 137 GDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFL 196
Query: 58 TGLVHW-----GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNS 111
GLV W GR +FD + +++ V W +I Y NG EA LL++M G + +
Sbjct: 197 EGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSF 256
Query: 112 STFVGLLSACPAS 124
T +LSAC S
Sbjct: 257 VTLCSVLSACSQS 269
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG C++ LSS NV +LI MY K + +KIF+ L + + WN LI YA+
Sbjct: 405 GLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQ 464
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
NGL EA +L I+ +K N TF +L+A A+E I
Sbjct: 465 NGLCKEA-FLTFLSAIKEIKPNQYTFGSVLNAIAAAEDI 502
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
AA + + G+ H + I++GL++ V AL+DMY K G ++ +++F+ +K
Sbjct: 497 AAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFS 556
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
W +I YAR+G + L +++ +G +S TF+ +L+AC
Sbjct: 557 WTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAAC 599
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ ++ + A G T N GK +HG ++G +H+ V LI Y K +
Sbjct: 281 MVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKV 340
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + +F + ++VV W LI N + L MR+ G+ N TF+GLL A
Sbjct: 341 LRDAKAVFQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGLLHA 395
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 22 DTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNC 81
D F+ G LH ++ G + + AL+ MY + G + ++F+ + +D+V WN
Sbjct: 199 DDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNA 258
Query: 82 LIGNYARNGLVG--EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ YA+ G EA+ L M +GM + + G +SAC
Sbjct: 259 MLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISAC 300
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G F++G +HG+ + G S + V +L+ MY K G +F+ L D+V WN ++
Sbjct: 98 GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTIL 157
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ ++ +AL M + G+ + T+ LS C
Sbjct: 158 SGFEKS---VDALNFACFMHLNGVVFDPVTYTTALSFC 192
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC+ L + T +L A G V+G+ +H ++ GL + V ++L+ MY K
Sbjct: 97 MCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNE 156
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+FD + DKDV WN +I Y ++G EAL MR G + +S T +S+
Sbjct: 157 FECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISS 216
Query: 121 C 121
C
Sbjct: 217 C 217
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + A T +L A G+ +H ++ L ++ V+ AL+DMY K G
Sbjct: 400 MSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGA 459
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F L ++D+V W +I Y +G V EAL L +M +K + TF+ +LSA
Sbjct: 460 VEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSA 519
Query: 121 C 121
C
Sbjct: 520 C 520
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A + + GK +HGY I+ + + + ++L+D+Y K G V IF + V
Sbjct: 317 ACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVS 376
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN +I Y G + +AL L +M ++ ++ TF +L+AC
Sbjct: 377 WNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAAC 419
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
A ++ LL A+ ++ + GK LH + +GL + + V LI +YV L + + +F
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 69 DSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQK-MRIQGMKTNSSTFVGLLSAC 121
D + + ++ L N L+ Y RN + EAL L K M +K +S T+ +L AC
Sbjct: 62 DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC 116
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H + G V AL+DMY K G + ++F+ + +K VV WN +I Y
Sbjct: 226 GREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGF 285
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
G + L ++M +G+K +T L AC S
Sbjct: 286 KGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQS 321
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC+ L + T +L A G V+G+ +H ++ GL + V ++L+ MY K
Sbjct: 97 MCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNE 156
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+FD + DKDV WN +I Y ++G EAL MR G + +S T +S+
Sbjct: 157 FECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISS 216
Query: 121 C 121
C
Sbjct: 217 C 217
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S + A T +L A G+ +H ++ L ++ V+ AL+DMY K G
Sbjct: 400 MSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGA 459
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F L ++D+V W +I Y +G V EAL L +M +K + TF+ +LSA
Sbjct: 460 VEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSA 519
Query: 121 C 121
C
Sbjct: 520 C 520
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A + + GK +HGY I+ + + + ++L+D+Y K G V IF + V
Sbjct: 317 ACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVS 376
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN +I Y G + +AL L +M ++ ++ TF +L+AC
Sbjct: 377 WNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAAC 419
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
A ++ LL A+ ++ + GK LH + +GL + + V LI +YV L + + +F
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 69 DSLVDK-DVVLWNCLIGNYARNGLVGEALYLLQK-MRIQGMKTNSSTFVGLLSAC 121
D + + ++ L N L+ Y RN + EAL L K M +K +S T+ +L AC
Sbjct: 62 DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC 116
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H + G V AL+DMY K G + ++F+ + +K VV WN +I Y
Sbjct: 226 GREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGF 285
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
G + L ++M +G+K +T L AC S
Sbjct: 286 KGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQS 321
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H Y ++G ++V +LIDMY K G + +F + D+ WN ++G ++
Sbjct: 437 GEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSH 496
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASE 125
+G+V +AL L +++ QG+ + TF+ LLSAC S
Sbjct: 497 HGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSR 533
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL S T+ LL AA G+ ++G LH ++ G + + V T+L++MY +
Sbjct: 109 GLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSA 168
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + ++D V WN LI Y +N + + +YL +M G TF +LSAC
Sbjct: 169 ESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSAC 225
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M W G + T ++L A ++ G+ +H I +S L++ AL+DMY G
Sbjct: 206 MMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGD 265
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLS 119
IF + D+V WN +I Y N +A+ L +++ K + T+ G++S
Sbjct: 266 TQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIIS 325
Query: 120 ACPA 123
A A
Sbjct: 326 ATGA 329
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A G F GK LHG I+ G + V + L+ MY K ++F S+ KD
Sbjct: 323 IISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKD 382
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+LW +I Y++ A+ +M + + + G+LS C
Sbjct: 383 AILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVC 428
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
AAG GK +H I++ L V++ ++DMY+K G + RK+F+ + D V
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
W +I NG +AL+ +MR+ G++ + TF L+ AC
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 2 CWSGLIAS-----ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV 56
C+ +I S + T +++L + +GK +HG ++ G ++V + I+MYV
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G V++ R++F + + D++ WN +I AR+GL +L L + G+ + T
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403
Query: 117 LLSACPASES 126
+L AC + E
Sbjct: 404 VLRACSSLEE 413
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H +++ + V+T+L+DMY K G + +F + + V LWN +I A+
Sbjct: 620 GKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQ 679
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+G EAL +M+ +G+ + TF+G+LSAC S
Sbjct: 680 HGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS 715
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ ++L GY ++IGL + V AL+++Y K + R +FD + +DVVLWN ++
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTN 110
Y G E L L G++ +
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLV 72
IL A D+ + ++GK H + GL+ V LI MY K G + RK+FD
Sbjct: 19 ILRHAIADS-DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 73 DKDVVLWNCLIGNYARNGLV------GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+D+V +N ++ YA G + EA ++ + +R M T T L C
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGD-TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
SGL+ T+ +L A ++ VG+ +H ++ G+ V TALID+Y K G +
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F + D+ WN ++ + + EAL L M +G K + TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKA 509
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
AAG GK +H I++ L V++ ++DMY+K G + RK+F+ + D V
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
W +I NG +AL+ +MR+ G++ + TF L+ AC
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 2 CWSGLIAS-----ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV 56
C+ +I S + T +++L + +GK +HG ++ G ++V + I+MYV
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G V++ R++F + + D++ WN +I AR+GL +L L + G+ + T
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403
Query: 117 LLSACPASES 126
+L AC + E
Sbjct: 404 VLRACSSLEE 413
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H +++ + V+T+L+DMY K G + +F + + V LWN +I A+
Sbjct: 620 GKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQ 679
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+G EAL +M+ +G+ + TF+G+LSAC S
Sbjct: 680 HGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS 715
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ ++L GY ++IGL + V AL+++Y K + R +FD + +DVVLWN ++
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTN 110
Y G E L L G++ +
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLV 72
IL A D+ + ++GK H + GL+ V LI MY K G + RK+FD
Sbjct: 19 ILRHAIADS-DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 73 DKDVVLWNCLIGNYARNGLV------GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+D+V +N ++ YA G + EA ++ + +R M T T L C
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGD-TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
SGL+ T+ +L A ++ VG+ +H ++ G+ V TALID+Y K G +
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F + D+ WN ++ + + EAL L M +G K + TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKA 509
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G++ S T +L A G GK +H +Q G + V TAL+DMY K G
Sbjct: 106 MHQKGILPSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGY 165
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
V R +FD +VD+DVV W +I YA+ G + +A L M
Sbjct: 166 VCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNM 207
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 35 YCIQIGLSSHLNVLT-ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
Y I+ G ++++ ALI M K G + + F+ + ++D+ ++ +I +A +G
Sbjct: 334 YDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQ 393
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+A+ L KM+ +G+ N TFVG+L+AC S
Sbjct: 394 DAIDLFLKMQQEGLTPNQVTFVGVLNACSTS 424
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
AAG GK +H I++ L V++ ++DMY+K G + RK+F+ + D V
Sbjct: 509 AAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA 568
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
W +I NG +AL+ +MR+ G++ + TF L+ AC
Sbjct: 569 WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKAC 611
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 2 CWSGLIAS-----ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYV 56
C+ +I S + T +++L + +GK +HG ++ G ++V + I+MYV
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343
Query: 57 KTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
K G V++ R++F + + D++ WN +I AR+GL +L L + G+ + T
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403
Query: 117 LLSACPASES 126
+L AC + E
Sbjct: 404 VLRACSSLEE 413
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H +++ + V+T+L+DMY K G + +F + + V LWN +I A+
Sbjct: 620 GKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQ 679
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+G EAL +M+ +G+ + TF+G+LSAC S
Sbjct: 680 HGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS 715
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ ++L GY ++IGL + V AL+++Y K + R +FD + +DVVLWN ++
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTN 110
Y G E L L G++ +
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLV 72
IL A D+ + ++GK H + GL+ V LI MY K G + RK+FD
Sbjct: 19 ILRHAIADS-DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 73 DKDVVLWNCLIGNYARNGLV------GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D+D+V +N ++ YA G + EA ++ + +R M T T L C
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC 132
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 4 SGLIASASTVLILLPAAGD-TGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
SGL+ T+ +L A ++ VG+ +H ++ G+ V TALID+Y K G +
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+F + D+ WN ++ + + EAL L M +G K + TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKA 509
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H ++ G S + + +AL+D+Y K G+V + +F S+ ++++ WN ++ +A+
Sbjct: 374 GKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQ 433
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL L + M +G+K +S TFV +L AC
Sbjct: 434 NGRGVEALALFEDMIKEGIKPDSITFVAVLFAC 466
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK----TGLVHWGRKIFDSL 71
LL + T +F G S+H + ++ GL S V +L+ +Y K L H R +FDSL
Sbjct: 56 LLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSH-ARHLFDSL 114
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
KDV+ W LI Y R+ L +++ L +M ++ N+ T ++ AC A
Sbjct: 115 HVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSA 166
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+A T+ ++ A + +G+ H + G + V +LIDMY V R++F
Sbjct: 153 NAFTLSSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVF 212
Query: 69 DSL-VDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSAC 121
D L V DV W +I + RN + E+L M R++G+ + TF +L+AC
Sbjct: 213 DELFVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTAC 267
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ T +L A + G GK +HG + +G ++ V ++L+DMY K G V
Sbjct: 252 GVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHS 311
Query: 65 RKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQK 101
R +F+ L D K+ V W ++G Y +N L L+++
Sbjct: 312 RIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRE 349
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A+ G +H I+ + V +LIDMY K G ++ R FD + +D
Sbjct: 445 VLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRD 504
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V WN +I Y+ +G+ EAL L M+ K N TFVG+LSAC
Sbjct: 505 EVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC 550
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F VGKS+HG ++ L V AL+++Y K+G + +++F+ + D++ W+ +I
Sbjct: 253 FNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIAR 312
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
YA++ EAL L +MR + N+ TF +L AC +S S+
Sbjct: 313 YAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
+LH ++G + V TALID Y G V R +FD + KD+V W ++ YA N
Sbjct: 157 TLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENC 216
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
E+L L +MRI G K N+ T G L +C E+
Sbjct: 217 FYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAF 253
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + ++ + T +L A + + +GK +H ++ GL+S++ V A++D+Y K G
Sbjct: 329 MRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE 388
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K+F+ L D++ V WN +I Y + G A+ L M M+ T+ +L A
Sbjct: 389 IENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRA 448
>Medtr5g031630.1 | PPR containing plant-like protein, putative | HC
| chr5:13562181-13560603 | 20130731
Length = 504
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G+ +H +++G + +++ ALI +Y K G V R +FDSL + D
Sbjct: 248 ILHACSSLAMLEAGEKIHAVTVKLGGNKYVD--AALIHLYGKCGNVEKARSVFDSLTELD 305
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV N +I YA+NG EAL L ++++ G++ N TF+ +L AC
Sbjct: 306 VVSINTMIYAYAQNGFGHEALELFKRLKKLGLEPNVVTFISILLAC 351
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
G+ HG + +G S V T ++DMY K G + + +FD ++DKDVVL+ LI Y
Sbjct: 7 GQKAHGLAVVLGFEVSDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYN 66
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++GL GEAL + ++M + +K N T +L +C
Sbjct: 67 QHGLDGEALEVFEEMVGRRVKPNEYTLASVLVSC 100
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L ++ T++ +LP GK +H Y ++ LS + V +AL+DMY K G ++ R
Sbjct: 505 LKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSR 564
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-----MKTNSSTFVGLLSA 120
+F+ + ++V+ WN LI Y +G EAL L ++M +G ++ N T++ + ++
Sbjct: 565 TVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFAS 624
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCI-QIGLSSHLNVLTALIDMYVKTG 59
M SG+ + T+ +LPA GK +H + + L + V AL+DMY
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCK 337
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLL 118
GR +FD + + + +WN +I Y RN EA+ L +M + G+ NS T +L
Sbjct: 338 QPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVL 397
Query: 119 SACPASESI 127
AC ES
Sbjct: 398 PACVRCESF 406
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 27 VVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
++GK +H + ++ G + N AL+ MY K G V+ + +FD DKD+V WN +I +
Sbjct: 204 LLGKQVHAFVLRNGDWRTFTN--NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISS 261
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++N EAL L M G++ N T +L AC
Sbjct: 262 LSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL ++ T+ +LPA +F+ + +H ++ G V AL+DMY + G +
Sbjct: 385 GLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIA 444
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM-------RIQ-----------G 106
R IF S+ KD+V WN +I Y G +AL LL M RI
Sbjct: 445 RSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFP 504
Query: 107 MKTNSSTFVGLLSACPA 123
+K NS T + +L C A
Sbjct: 505 LKPNSVTLMTVLPGCAA 521
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ +L A + +GK LH + + G + V + ++MY K G
Sbjct: 76 MVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGD 135
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ R++FD + ++D V WN +I R A++L + M ++ + S T V + A
Sbjct: 136 IDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHA 195
Query: 121 C 121
C
Sbjct: 196 C 196
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A + GK +H + G S++ V ++LIDMY K G + +F + +VL
Sbjct: 267 ACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVL 326
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
WN +I + R+ EA+ L +KM+ +G+ + T+V +L+AC
Sbjct: 327 WNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNAC 369
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L + + + G++ H I +G + + LI+MY K LVH R +FD + K
Sbjct: 62 ILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKS 121
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV WN +IG R EAL L +M +G N T +L C
Sbjct: 122 VVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCEC 167
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNG 90
LH + I++ + S+ V TAL+ +Y K + K+F+S+ + + V W+ ++ Y +NG
Sbjct: 178 QLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNG 237
Query: 91 LVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
L AL L + ++ G + ++ + AC
Sbjct: 238 LHEAALLLFRDYQLMGFEQDAFLISSAVCAC 268
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGN 85
F LH ++ G + + +LT L+D+Y KTG + + RK+FD + +D+ WN +I
Sbjct: 101 FSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISG 160
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A+ EA+ L +M+ +G + N T +G LSAC
Sbjct: 161 LAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSAC 196
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TVL L A G G+ +H Y + L ++ V A+IDM+ K G V +F+S+
Sbjct: 188 TVLGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESM 247
Query: 72 -VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K ++ WN +I +A NG +AL LL +M + G ++ +++G L AC
Sbjct: 248 SCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCAC 298
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
T+ +LP + + G+++HGY I+ + HL + LIDMY K +V +F S
Sbjct: 219 TLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHS 278
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
D+V WN +I Y++N +A L +++ G +SST +LS+C ++ S+
Sbjct: 279 TAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSL 335
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A G + GK +HGY + G + + AL+D+Y G + K+F
Sbjct: 522 TIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRH- 580
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
K WN +I Y +G +A+ L +M G+K STFV LLSAC S
Sbjct: 581 SQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHS 633
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ +L A + GKSLH ++ S V +LI MY + ++ RK+F
Sbjct: 424 TLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFH 483
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ WNC+I + N EAL L + ++ K N T V +LSAC
Sbjct: 484 SISNLCTWNCMISALSHNKESREALELFRHLQF---KPNEFTIVSVLSAC 530
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
+ A G G+ +HG I++G +S ++V +LI +Y + V +F + K
Sbjct: 120 ISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK 179
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSACP 122
D+V WN ++ YA N + EA L+ +M+ G + + T +L C
Sbjct: 180 DIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCA 228
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 10 ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK--I 67
++T+L+++ NF G+ +H I+ G+ +++ ALI+MY K G V+ +
Sbjct: 10 STTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECL 69
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
F+ + KDVV WN ++ NG + ++L ++M + + + +SAC +
Sbjct: 70 FEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSS 125
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H I+ G S + V +++I+MY K G + K+F + + ++LW +I +A+
Sbjct: 415 GEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQ 474
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G +AL L + M++ G++ N TFVG+LSAC
Sbjct: 475 HGWSKQALNLFEDMKLVGIRPNLVTFVGVLSAC 507
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +H C ++G S+L V +L+ +Y+K G + +++F + D ++V WN +I +A
Sbjct: 302 LGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHA 361
Query: 88 ------RNGLVG-----EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ L EAL L K+ GMK + TF +LS C
Sbjct: 362 QMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVC 406
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G + +T+ +L +G +G+ +H + G+ + + TAL+ MY K G +
Sbjct: 235 GFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTA 294
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLSAC 121
RK+FD + +++VV WN +I A +G V +AL L + M+ + + N+ TFVG+LSAC
Sbjct: 295 RKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSAC 352
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVG-KSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M G+I T LL A N + K +H + ++ GL +V L+ Y +G
Sbjct: 129 MRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSG 188
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R +FD + K++ LW +I YA+N EAL L ++M + G + N +T +LS
Sbjct: 189 DLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLS 248
Query: 120 ACPAS 124
C S
Sbjct: 249 VCARS 253
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A + G +G+S+H ++ + ++ V +AL+D+Y K G + ++F L + +
Sbjct: 316 VLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESN 375
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRI--QGMKTNSSTFVGLLSAC 121
+V WN +IG YA G + AL L ++M + +G++ + T V +LS C
Sbjct: 376 LVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVC 423
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + + T ++ A T +VGKS+HG + GL L V T L+DMY K G
Sbjct: 106 MKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGE 165
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT 109
+ RK+FD L D++VV W ++ Y G V EA + +M ++ + +
Sbjct: 166 IGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVAS 214
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
T +ID Y K G + R +F+ +KDVV W+ LI Y +NG EAL + +M +
Sbjct: 246 FTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKV 305
Query: 108 KTNSSTFVGLLSA 120
+ V L+SA
Sbjct: 306 IPDEFVLVSLMSA 318
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 119 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 178
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ + YA NG + L L +M + +K N T V +L AC
Sbjct: 179 SDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRAC 228
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K F+ +
Sbjct: 220 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM 279
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 280 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 327
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G H + I+ G ++ + +LI++Y K
Sbjct: 310 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 369
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL-YLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL + Q K N+ TF+ +LS
Sbjct: 370 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 429
Query: 120 ACPAS 124
AC S
Sbjct: 430 ACSHS 434
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + + V +ALID+Y K G ++ ++F
Sbjct: 17 SVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEY 76
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW ++ Y ++G AL +M + + + + T V + SAC
Sbjct: 77 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 127
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 270
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ + YA NG + L L +M + +K N T V +L AC
Sbjct: 271 SDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRAC 320
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K F+ +
Sbjct: 312 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM 371
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 372 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 419
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G H + I+ G ++ + +LI++Y K
Sbjct: 402 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL-YLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL + Q K N+ TF+ +LS
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
Query: 120 ACPAS 124
AC S
Sbjct: 522 ACSHS 526
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + + V +ALID+Y K G ++ ++F
Sbjct: 109 SVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEY 168
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW ++ Y ++G AL +M + + + + T V + SAC
Sbjct: 169 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 219
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ + A NF +G+S+HG+ + GL + L + +L+ +Y KTG + +F +
Sbjct: 211 TLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREM 270
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ W+ + YA NG + L L +M + +K N T V +L AC
Sbjct: 271 SDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRAC 320
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
TV+ +L A N G +H + G V TAL+DMY+K F+ +
Sbjct: 312 TVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM 371
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
KDV+ W L YA NG+V E++++ + M G + ++ V +L+
Sbjct: 372 PKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILT 419
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG A ++ +L + G H + I+ G ++ + +LI++Y K
Sbjct: 402 MLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSS 461
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL-YLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F + KDVV W+ +I Y +G EAL + Q K N+ TF+ +LS
Sbjct: 462 IEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
Query: 120 ACPAS 124
AC S
Sbjct: 522 ACSHS 526
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
+V I L + ++GK +HG+ ++ + + + V +ALID+Y K G ++ ++F
Sbjct: 109 SVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEY 168
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRI-QGMKTNSSTFVGLLSAC 121
DVVLW ++ Y ++G AL +M + + + + T V + SAC
Sbjct: 169 PKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 219
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A D G+ + GY ++ G++ V I MY K+G + R F DVV
Sbjct: 365 ACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVS 424
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
W+ +I +YA++G E+L L + M + G+ N T +G+L+AC
Sbjct: 425 WSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTAC 467
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLVDKDVVLWNCL 82
N G+ +HG+ I++GL ++ V TAL+DMY K+G + ++F+ L K+ ++N +
Sbjct: 163 NCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAM 222
Query: 83 IGNYARNGL----VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
I + R GL EA+ + +MR G+K + TF ++ AC
Sbjct: 223 IAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHW 63
G + + + LL T N +G+++H + G L+ + L +LI+MY K +
Sbjct: 36 GSLNPLTNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQT 95
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGL---VGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R +FD+ KD V WN +I YA+ G GE L+ +M G + T +L+A
Sbjct: 96 SRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNA 155
Query: 121 C 121
C
Sbjct: 156 C 156
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S T ++ A G+F VG+ +HG ++ L V ++L+D+Y G + G
Sbjct: 250 GVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDG 309
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ F+ DVV W I +NG L L + G K + ++ AC
Sbjct: 310 LRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGAC 366
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G S + + + + G+ +H I+ G ++ V ++L++MY K G V
Sbjct: 514 GFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAA 573
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R FD + K++V WN +I YA NG EA+ L + M G K + TFV +L+AC S
Sbjct: 574 RYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHS 633
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H ++ G L++ +L+DMY KTG + +F++L VV WN +I Y
Sbjct: 270 GKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGN 329
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+AL Q+M+ G + + T++ +L+AC S
Sbjct: 330 RCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKS 365
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
+T+ I+L + + G GK +H ++G + V ++LI++Y K G + + +F
Sbjct: 419 TTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSK 478
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
L + DVV WN +I ++ N L +AL ++MR G + +F + S+C S+
Sbjct: 479 LSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSL 535
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 43 SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+++N+LTA VK+G V GR+IFD + ++ WN ++ Y ++ GEA+ L +KM
Sbjct: 354 TYINMLTAC----VKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKM 409
Query: 103 RIQGMKTNSSTFVGLLSAC 121
+ Q + +T +LS+C
Sbjct: 410 QFQWQNPDRTTLAIILSSC 428
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M + + S T + A G + G+ HG +++G S++ V AL+ MY K GL
Sbjct: 129 MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGL 188
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++F+ +V+ + V + ++G ++ V E L L + M +G+ +S + +L
Sbjct: 189 NEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVI 248
Query: 121 C 121
C
Sbjct: 249 C 249
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++ A D G+ + GY ++ G++ V I MY K+G + R F D
Sbjct: 362 VMGACADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPD 421
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV W+ +I +YA++G E+L L + M + G+ N T +G+L+AC
Sbjct: 422 VVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTAC 467
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD--SLVDKDVVLWNCL 82
N G+ +HG+ I++GL ++ V TAL+DMY K+G + ++F+ L K+ ++N +
Sbjct: 163 NCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAM 222
Query: 83 IGNYARNGL----VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
I + R GL EA+ + +MR G+K + TF ++ AC
Sbjct: 223 IAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKAC 265
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHW 63
G + + + LL T N +G+++H + G L+ + L +LI+MY K +
Sbjct: 36 GSLNPLTNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQT 95
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGL---VGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
R +FD+ KD V WN +I YA+ G GE L+ +M G + T +L+A
Sbjct: 96 SRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNA 155
Query: 121 C 121
C
Sbjct: 156 C 156
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ S T ++ A G+F VG+ +HG ++ L V ++L+D+Y G + G
Sbjct: 250 GVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDG 309
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ F+ DVV W I +NG L L + G K + ++ AC
Sbjct: 310 LRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGAC 366
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD-KDVVLWNCLIGNYA 87
GK +H + ++ + + V++A++DMY K G + R+IF+ +DVVLWN +I A
Sbjct: 329 GKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALA 388
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
G EA+ +L M G+K N +T V +L+AC S
Sbjct: 389 HYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHS 425
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
T L+ Y G + ++F + K+ W LIG YARNG+ +AL + +KM + ++
Sbjct: 248 TTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVR 307
Query: 109 TNSSTFVGLLSACPASESI 127
+ TF L AC S+
Sbjct: 308 PDEFTFSSCLFACATIASL 326
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+I YVK G++ R +F + +KD V WN ++ YA G EAL MR + N
Sbjct: 118 MISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYN 177
Query: 111 SSTFVGLLSAC 121
TF +L C
Sbjct: 178 EFTFASVLIVC 188
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VG+ +H + ++ G + + V +LI +++ GL RK+FD + +DVV WN ++ Y
Sbjct: 147 VGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYL 206
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
RNG V AL L +KM + + T +S GL+ A A ES+
Sbjct: 207 RNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESL 246
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ +L A G+ GK +H Y + + + + TAL++MY K G V +IF+ +
Sbjct: 267 TIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDM 326
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+KD W +I +A +G +A +M G+K N TFVGLLSAC S
Sbjct: 327 PEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHS 379
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H + +++ L L++ +LI Y K G V KIF +V+ +VV +N +I +A+
Sbjct: 439 GLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQ 498
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
NG EAL + ++M+ + ++ N TF+ +LSAC
Sbjct: 499 NGFGEEALSMYKRMQNESLEPNRVTFLAVLSAC 531
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+++T+ I++ G+ G G +HG ++G + +I MY G +K+F
Sbjct: 256 NSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVF 315
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
+ +KD+V WN LI Y N V A + ++M
Sbjct: 316 SGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERM 349
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ T + L A G+ + I+ GL+S L+V AL+ MY K G
Sbjct: 275 MVRTGMQPDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGE 334
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ FD + D+V WN +I +A++GL A Y M G+ + TF+ LLSA
Sbjct: 335 IVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSA 394
Query: 121 C 121
C
Sbjct: 395 C 395
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
TA+I + K G + +F + KD WN +I +A+NG EAL L +M GM
Sbjct: 221 FTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGM 280
Query: 108 KTNSSTFVGLLSACPA 123
+ + TFV L +AC +
Sbjct: 281 QPDDLTFVSLFTACAS 296
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G A ST+ +L A + +G+ +H + ++ LN AL+DMY K G
Sbjct: 274 MRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLILN--NALLDMYCKCGS 331
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ + IF + KDV+ W+ +I A+NG EAL L M++ G + N T +G+L A
Sbjct: 332 LEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFA 391
Query: 121 C 121
C
Sbjct: 392 C 392
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K +H ++ GL S + V +ALID Y K G + +F +V D V+WN +I +A++
Sbjct: 202 KQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQH 261
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
EAL L + MR +G + ST +L AC S
Sbjct: 262 SDGDEALALYKSMRREGFPADQSTLTSVLRACTGS 296
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H + G ++ L++MYVK L+ + +FD + +++VV W +I Y+
Sbjct: 103 GKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSY 162
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
L A+ LL M G+ N TF +L AC
Sbjct: 163 AKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRAC 195
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +H I+ GL S + V ++LIDMY K G V+ IF+ L ++++V WN +I YAR
Sbjct: 289 GMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYAR 348
Query: 89 NGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSACPASE 125
NG +A+ L + ++++ K + TF+ ++SAC S+
Sbjct: 349 NGDSAQAISLFELLKMERDTKPDGITFLNVISACSHSQ 386
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G S+H +++G+ ++ V LIDMY K G V +IF + DKDV+ WN +I A
Sbjct: 125 LGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACA 184
Query: 88 RNGLVGEALYLLQKM 102
NG +G LQ M
Sbjct: 185 NNGNIGLGFKFLQLM 199
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWG 64
+ +A ++ L+ A D G+ +H Y I+ G +++ V T LI YVK L
Sbjct: 1 MTKNALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHA 60
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + +VV WN LI Y G +AL L K+ + ++ +F + AC
Sbjct: 61 HNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVAC 117
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTG 59
M G++ TV +L AA G++ GK +HG+ ++ G + +V AL+DMY K G
Sbjct: 198 MRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCG 257
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
K+FD + +DVV W ++ + + +AL ++M + + N T +LS
Sbjct: 258 YCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLS 317
Query: 120 AC 121
AC
Sbjct: 318 AC 319
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M ++ + T+ +L A G G+ +H Y + + + T+L+DMY K G
Sbjct: 300 MLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGC 359
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F++L K+V W +I A +G AL + +M G++ N TF+G+L A
Sbjct: 360 VDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGA 419
Query: 121 C 121
C
Sbjct: 420 C 420
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 37 IQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL 96
++G V I + +G + K+FD ++D+V W LI + +NG+ GEAL
Sbjct: 133 FKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEAL 192
Query: 97 YLLQKMRIQGMKTNSSTFVGLLSA 120
+MR++G+ + T +L A
Sbjct: 193 RCFVEMRLKGVVIDGFTVASVLRA 216
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTG 59
M G++ TV +L AA G++ GK +HG+ ++ G + +V AL+DMY K G
Sbjct: 198 MRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCG 257
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
K+FD + +DVV W ++ + + +AL ++M + + N T +LS
Sbjct: 258 YCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLS 317
Query: 120 AC 121
AC
Sbjct: 318 AC 319
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M ++ + T+ +L A G G+ +H Y + + + T+L+DMY K G
Sbjct: 300 MLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGC 359
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V +F++L K+V W +I A +G AL + +M G++ N TF+G+L A
Sbjct: 360 VDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGA 419
Query: 121 C 121
C
Sbjct: 420 C 420
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 37 IQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEAL 96
++G V I + +G + K+FD ++D+V W LI + +NG+ GEAL
Sbjct: 133 FKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEAL 192
Query: 97 YLLQKMRIQGMKTNSSTFVGLLSA 120
+MR++G+ + T +L A
Sbjct: 193 RCFVEMRLKGVVIDGFTVASVLRA 216
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLV 61
S + + +TV+ LL AA G +G LHG+ +++ +V T L+DMY K G +
Sbjct: 43 SEVRPNDTTVVCLLSAASQLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCL 102
Query: 62 HWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + ++V+ W + A +G EAL +L +M G+K N +TF LLSAC
Sbjct: 103 ESALSVFRRMKWRNVLTWTAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSAC 162
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS----HLNVLTALIDMYV 56
M G++ A T + +L A GK +H I+ G SS ++ V AL+DMY
Sbjct: 268 MIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYVFNALMDMYA 326
Query: 57 KTGLVHWGRKIFDSLVD-KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFV 115
K G + +F+ ++ KDVV WN LI +A+NG ++L + +M ++ N TF+
Sbjct: 327 KCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFL 386
Query: 116 GLLSAC 121
G+LSAC
Sbjct: 387 GVLSAC 392
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK+LH I+ L + LID+Y K G K FD L +K WN L+ Y++
Sbjct: 30 GKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSK 89
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G+ +A L +M + + + +S GL
Sbjct: 90 KGVFNQAYKLFDEMPQRNLVSYNSLISGL 118
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 32/129 (24%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR- 88
+ +HG +G ++L + ALID Y K G + +F S+V+KD V W ++ Y R
Sbjct: 165 RQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRA 224
Query: 89 ------------------------------NGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
NG EAL + +M +G+ + TFV +L
Sbjct: 225 SRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVL 284
Query: 119 SACPASESI 127
AC ASE++
Sbjct: 285 DAC-ASEAL 292
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SGL + +L A ++G +GK +H ++ VL + IDMY K G V
Sbjct: 312 SGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDD 371
Query: 64 GRKIFDSL-VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++F+ + +KD+V WN +I + +G +++ L M +G K + TF+GLL AC
Sbjct: 372 AFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCAC 430
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
Y K G + R +FD K++VLW +I YA G V EA+ L +M G++ + F
Sbjct: 262 YSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFF 321
Query: 115 VGLLSACPAS 124
+ +L+AC S
Sbjct: 322 ISILAACAES 331
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 4 SGLIASASTVLILLPAAGDTGNFV-VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH 62
G++A T LL + +++ + K +H + ++G + V +LID Y + G V
Sbjct: 117 DGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVE 176
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
K+F + ++DVV WN ++G +NG + AL + +M
Sbjct: 177 MAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEM 216
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
++ + ++ A G GK +H Y + G + + ++LIDMY K G +
Sbjct: 239 VVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSL 298
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F L +K++ WN +I A +G EAL + +M +G++ N TFV +L+AC
Sbjct: 299 LVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTAC 354
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M S +I S+ + L+ A + V GK+LHG+ + G SH+ V T L++ Y G
Sbjct: 69 MLRSSVIPSSYSFSSLIKACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGY 128
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
V RK+FD + +DV W +I Y RN V A L +M
Sbjct: 129 VCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEM 170
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 35/156 (22%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +S + T + A G+ G LHG +++GL + + +I MY GL
Sbjct: 118 MLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGL 177
Query: 61 VHWGRKIFD----SLVDKDVVL-------------------------------WNCLIGN 85
+ R++FD L D DVV WN +I
Sbjct: 178 MSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISG 237
Query: 86 YARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
Y RNG + EAL L KM+++G + + T V LL+AC
Sbjct: 238 YVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNAC 273
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G S T++ LL A G GK +H Y + ++ V+TA+IDMY K G
Sbjct: 254 MQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGS 313
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLS 119
V ++F++ + + WN +I A NG EA K+ +K +S +F+G+L+
Sbjct: 314 VENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLT 373
Query: 120 AC 121
AC
Sbjct: 374 AC 375
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLIGNYA 87
GK LH I++ S ++V ALI MY K+G + RK+F+ + ++D + W +I A
Sbjct: 428 GKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALA 487
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++GL EA+ L + M +K + T+VG+LSAC
Sbjct: 488 QHGLGNEAIELFEDMLKFNLKPDHITYVGVLSAC 521
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 37 IQIGLSSHLNVL--TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGE 94
+++ +S++NV+ T+L++ YVK G V+ R+IFDSL +DVV W +I YA+N L+ +
Sbjct: 333 VELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKD 392
Query: 95 ALYLLQKMRIQGMKTNSSTFVGLLS 119
AL L + M +G + NS T +LS
Sbjct: 393 ALELFRLMISEGPRPNSYTLAAVLS 417
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG- 59
M G++ + T +L + TG+ +GK +H + +++GLS + V +L++MYVK+G
Sbjct: 133 MISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGD 192
Query: 60 -------------------------LVHWGR-----KIFDSLVDKDVVLWNCLIGNYARN 89
+ GR +FD + D+D++ WN +I Y
Sbjct: 193 SLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQ 252
Query: 90 GLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPASESI 127
G +AL M R +K + T +LSAC ES+
Sbjct: 253 GYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESL 291
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 31/149 (20%)
Query: 10 ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKT----------- 58
+ T + LL +A + + V G+ +H I+ GL + ++ L++ Y KT
Sbjct: 10 SDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFS 69
Query: 59 --------------------GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYL 98
G + R++FD + + D V W +I Y + G A++
Sbjct: 70 EMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHT 129
Query: 99 LQKMRIQGMKTNSSTFVGLLSACPASESI 127
Q+M G+ TF +L++C A+ S+
Sbjct: 130 FQQMISDGILPTQFTFTNVLASCVATGSL 158
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 13 VLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV 72
+L +L A D G +G+ +H Y + LS + + +LIDMY K+G + ++F+++
Sbjct: 247 ILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMK 306
Query: 73 DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
K ++ W +I A +GL EAL + M + +K N TF+ +LSAC
Sbjct: 307 HKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSAC 356
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 47 VLTALIDMYVKTGLVHWGRKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRI 104
VL A+I YVK G V RK+FDS++ DKDV W +I Y + EA+ L ++M++
Sbjct: 178 VLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQL 237
Query: 105 QGMKTNSSTFVGLLSAC 121
+ +K + + +LSAC
Sbjct: 238 ENVKPDEIAILAVLSAC 254
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M SG V+ +LPA G LHGY ++ L S ++ T+L++ Y K G
Sbjct: 410 MKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGC 469
Query: 61 VHWGRKIFDSLVD--KDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ RK+F+ KD+V WN +I Y+ +G + L ++++ +K + TF+G+L
Sbjct: 470 IEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGML 529
Query: 119 SAC 121
+AC
Sbjct: 530 TAC 532
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ LL A ++ + +GK LH + L L V TAL+ MY K + R +F+ +
Sbjct: 219 TLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKM 278
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+KDVV+WN +I Y+ +G E+L L+ M G++ + + +A PA SI
Sbjct: 279 PEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPD------MFTAIPAISSI 328
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK LH I+ G ++V +L+DMY ++ RKIF + D+ VV W+ +I YA
Sbjct: 337 GKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAM 396
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ EAL L +M++ G K + + +L A
Sbjct: 397 HDNCLEALSLFIEMKLSGTKVDLVIVINILPA 428
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ T +L G G VG+ +H + ++ G VL AL+DMY K G
Sbjct: 205 MVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGD 264
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ RKIF+ + +D V WN ++ Y R+GL EA+ + ++M ++G K + + +L++
Sbjct: 265 IVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTS 324
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VG +HG+ I+ G+ +L++ +LI Y K G + R IF+ + ++DVV WN +I ++
Sbjct: 330 VGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHC 389
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++ EA+ +KM G + TFV LLSAC
Sbjct: 390 KH---PEAISYFEKMEEAGEVPDKITFVSLLSAC 420
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 63/110 (57%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ L+ A D G+ +G+ +H + ++ G + TAL+DMY K G + K+F +
Sbjct: 253 TLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLM 312
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ WN ++ ++ +G E L L ++M G+ ++ TFVG+LSAC
Sbjct: 313 EVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSAC 362
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 32/149 (21%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG----- 59
G + T ++ A +G G+ HG I++G S + V ++++Y K G
Sbjct: 113 GFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDD 172
Query: 60 ------------LVHW---------------GRKIFDSLVDKDVVLWNCLIGNYARNGLV 92
+V W R++F+ + K+VV W +I Y +N
Sbjct: 173 GWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNP 232
Query: 93 GEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+A L ++M I ++ N T V L+ AC
Sbjct: 233 IKAFDLFERMLIDNVRPNEFTLVSLIKAC 261
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
NF K +H I+ L+ ++ L + G + + +FD L D D+ WN +I
Sbjct: 31 NNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMI 90
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
Y +GL ++++L + M G + T+ +++AC AS
Sbjct: 91 RAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIAS 131
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ A+ T +L + D + + +HG ++ G SS++ + +AL+D+Y K G++ +
Sbjct: 158 DGVRANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVY 217
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
R++F + + V WN ++ Y G EA+ L +M G+K + TF L AC +
Sbjct: 218 ARRMFHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSS 277
Query: 124 SESI 127
++
Sbjct: 278 MHAL 281
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
S T LL A +T + +GK +HG+ I+ + TALI MY K + + +I
Sbjct: 496 PSKYTFGTLLAACANTYSLHLGKQIHGFIIRHEFQIDSVIRTALIYMYCKCYCLEYAVEI 555
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V +DV++WN LI N +AL L M +G+K + TF G+L AC
Sbjct: 556 LKGAVSRDVIMWNTLILGCCHNHRGRDALELFGIMEAEGIKPDRVTFEGILLAC 609
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G +HG ++ GL V ++LI+MYVK G + G ++F L KD+V W C++ YA
Sbjct: 284 GMQIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAM 343
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+G +A L +M ++ + + ++ G SE++
Sbjct: 344 SGKTWDARKLFDQMPVRNVISWNAMLAGYTRFFKWSEAL 382
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVD-KDVVLWNCLIGNY 86
+GK LHG+ + G S+L V A++DMY K G ++ R F+ + + +D V WN L+ +
Sbjct: 415 MGKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLASC 474
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ + L + +M+ + K + TF LL+AC + S+
Sbjct: 475 GLHHSSEQTLTMFSEMQWEA-KPSKYTFGTLLAACANTYSL 514
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G S+HGY I +G+ L TAL+D+Y K + RK+F+ L +KD V++N ++ Y
Sbjct: 259 GMSIHGYMITMGVELDLVASTALVDLYCKIDITK-ARKLFERLGNKDAVVYNVMMTGYLE 317
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
NGL EA+ + ++M TN + F+ L+SA
Sbjct: 318 NGLPVEAVNVFREMVKTNASTNVALFLNLISA 349
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
+S+HGY ++ +H+ + +I Y K G V R++F+ + +D+V W +I Y +
Sbjct: 360 RSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYH 419
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
G + +A+ L + ++ + + +S T +GLL A
Sbjct: 420 GHIDKAIILFRLLQREHLSIDSVTLIGLLQA 450
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T++ LL A G K +H + + L+V +LI Y K G + R IF +
Sbjct: 443 TLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQM 502
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
++ + WN +IG YA +G E L L M+ + + TF +L+AC S
Sbjct: 503 TERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHS 555
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYVKT 58
M G++ + T++ L+ AA G+++HGY + +IGL + T L+DMY K
Sbjct: 126 MQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDV-FETTLLDMYHKC 184
Query: 59 GLVHWGRKIF---DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
G V +F D+ V WN LI Y RNG EA L ++M
Sbjct: 185 GGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRM 231
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 10 ASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD 69
AST+ L G G +H I++ +S V ++LI +Y + G + K+FD
Sbjct: 32 ASTITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFD 91
Query: 70 SLVDKDVVLWNCLIGNYARNG--LVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +KD+ + +I Y +G V A M+ QGM N T V L+ A
Sbjct: 92 EITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHA 144
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSH-LNVLTALIDMYVKTG 59
M G +T++ +LP G+ G+ +H Y GL ++V +L+D Y K G
Sbjct: 231 MLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCG 290
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ K+F+ + K+VV WN +I NG + L +KM +G+ + STFVG+L+
Sbjct: 291 NLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLA 350
Query: 120 AC 121
C
Sbjct: 351 CC 352
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 31/141 (21%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T LL A ++ +G+ LH + +G H V L+++Y G + K+FD +
Sbjct: 110 TFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEM 169
Query: 72 VDKDVVLWNCLIGNYARNGLV-------------------------------GEALYLLQ 100
+ ++VV+WN +I + + G + GEA + +
Sbjct: 170 LHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFR 229
Query: 101 KMRIQGMKTNSSTFVGLLSAC 121
+M QG + + +T V +L C
Sbjct: 230 EMLEQGFEPDDATLVTVLPVC 250
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 20/138 (14%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+A T++ + A G +G GKS+HG I++ + S L + TALIDMY K G V K+
Sbjct: 267 ENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASKV 326
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM----RIQG----------------M 107
F+ + +++V WN +I + +G + L L M R++G +
Sbjct: 327 FERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMERVKGEVEVDESSSADRGLVRL 386
Query: 108 KTNSSTFVGLLSACPASE 125
+ TF+G+L AC +E
Sbjct: 387 LPDEITFIGILCACARAE 404
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 49 TALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMK 108
++ID YVK G + K+FD + ++++V WNCLI Y++ G AL L ++M ++
Sbjct: 207 NSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIR 266
Query: 109 TNSSTFVGLLSACPAS 124
N+ T V ++AC S
Sbjct: 267 ENARTMVCAVTACGRS 282
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G T + ++ + + GK +H I+ G SS + V+++L+ MY K G
Sbjct: 277 MKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGS 336
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K F ++DVVLW+ +I Y +G +A+ L + M N TF+ LL A
Sbjct: 337 LQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYA 396
Query: 121 CPAS 124
C S
Sbjct: 397 CSHS 400
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ +A ++ +L D GK +H + LS +T+LI MY K G
Sbjct: 253 MLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGD 312
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F + KDVV WN +I YA++G +AL+L +M+ +K + TFV +L A
Sbjct: 313 LKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLA 372
Query: 121 C 121
C
Sbjct: 373 C 373
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ ++ T +L A +GK +H + ++ + S + + +LIDMY K G + +
Sbjct: 53 GMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYS 112
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLLSAC 121
R+IFD++ ++ V+ WN ++ Y+++G E L L MR + +K +S T + +LS C
Sbjct: 113 RRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGC 170
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 54 MYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSST 113
MY K G +H R +F+ L ++DVV +I YA+ GL EAL L ++++ +GMK+N T
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 114 FVGLLSA 120
+ G+L+A
Sbjct: 61 YTGVLTA 67
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF-DSLVDKDVVLWNCLIGNYA 87
GK +H Y + + + +L +LIDMY K G + +F + V + V WN +IG +A
Sbjct: 262 GKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFA 321
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G EA+ + +KM+++ + N TF+ LL+AC
Sbjct: 322 MHGKPEEAINVFEKMKVEKVSPNKVTFIALLNAC 355
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 31/149 (20%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG + + + A G+ G+ + + +++GL ++ V+ ALI M+ K G V
Sbjct: 105 SGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVED 164
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNG----------------------------LVG-- 93
R +FDS VD+D WN +IG Y +G VG
Sbjct: 165 ARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCF 224
Query: 94 -EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EAL KM +K N T V L+AC
Sbjct: 225 MEALDFFHKMLQSEVKPNEYTMVSALAAC 253
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G +T L +L +G+++H Y ++ ++ + + TAL+DMY K G
Sbjct: 307 MLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGE 366
Query: 61 VHWGRKIF-DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ-GMKTNSSTFVGLL 118
+ +KIF +SL KDVV+W +I A +G EAL L Q M+ + + T++G+L
Sbjct: 367 LGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVL 426
Query: 119 SAC 121
AC
Sbjct: 427 FAC 429
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G T +L A + V GK +H ++ G +++ V T L++MYV+
Sbjct: 98 MLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKN 157
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ G K+FD + +VV W CLI Y N EAL + ++M G++ N T V L A
Sbjct: 158 MESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIA 217
Query: 121 C 121
C
Sbjct: 218 C 218
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIG-----LSSHLNVL--TALIDMYVK 57
G+ A+ T++ L A + G+ +H + G +S+ NV+ TA+++MY K
Sbjct: 203 GVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAK 262
Query: 58 TGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 117
G ++ R++F+ + ++++V WNC+I Y + EAL L M G + +TF+ +
Sbjct: 263 CGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSV 322
Query: 118 LSAC 121
LS C
Sbjct: 323 LSVC 326
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL--VH 62
G+ + T +L G+ +GK +HG ++ G ++VL LI MY G
Sbjct: 120 GVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFE 179
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ K+FD D V W+ +I + R G A+ L ++M++ G+ + T V +LSAC
Sbjct: 180 FAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSAC 238
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ T++ +L A D G +GK + Y + + + + ALIDM+ K G V
Sbjct: 223 GVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKA 282
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
K+F + + +V W +I A +G +A+ L +M G+ + F+G+LSAC S
Sbjct: 283 IKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHS 342
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDK 74
+L A G F GK LHG+ + G ++V ALID Y K G V + +F + +K
Sbjct: 282 VLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEK 341
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+V W +I A +G EA+ + +M G++ + TF+ LL AC S
Sbjct: 342 CIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHS 391
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L S S L A D + G LH + + G H+ V T LI MY + G + R
Sbjct: 109 LPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYAR 168
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+FD + +VV WN ++ R G V A L ++M ++ + + ++ G + A
Sbjct: 169 KVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKA 223
>Medtr2g006810.1 | PPR containing plant-like protein | HC |
chr2:618974-616539 | 20130731
Length = 614
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GKS+HGY I +G+ L TAL+D+Y K + R +F+ L +KD V++N ++ Y
Sbjct: 242 GKSIHGYMIMMGVELDLVASTALVDLYCKIDVTK-ARMLFERLENKDAVVYNVMMSGYLE 300
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
N L EAL + +M + N + F+ L+SA
Sbjct: 301 NNLPAEALNVFCEMVKMNVSPNVALFINLISA 332
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL-TALIDMYVK-T 58
M GL+ + T++ L+ AA G+++HGY ++ G+ +V T L+DMY K
Sbjct: 108 MQQQGLLPNQVTLVSLMDAAAKLVALQEGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCA 167
Query: 59 GLVHWGRKIF---DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFV 115
G V +F D+ V WN LI Y RNG EA L ++M + + + T
Sbjct: 168 GCVGLAASVFAKMDARKRTKVGSWNTLIAGYLRNGQALEAFELFRRMMCRNILPDLLTLA 227
Query: 116 GLLSAC 121
++ C
Sbjct: 228 NVIFCC 233
>Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:2188077-2185482 | 20130731
Length = 316
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++L + +GK +HG + G + L ALI+MY K G + + RK+FD +
Sbjct: 111 TLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ V W+ +I Y +G E + +M G + ++ +F +L+AC
Sbjct: 171 CERNEVTWSTMIAGYGMHGRFEEVFEMFNRMVEVGERMDNVSFTVVLTAC 220
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
++PA +G+ LHG +++G + + ++L+DMY K G + R +FD + +D
Sbjct: 334 VIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRD 393
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V W +I A +G +A+ L + M G++ F+ +L+AC
Sbjct: 394 MVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTAC 439
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
L + T+ +LP + + GK +HGY ++ G + + ++LIDMY K +
Sbjct: 223 LKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSL 282
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ F L KD + WN +I +NG L ++M + +K + +F ++ AC
Sbjct: 283 RAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPAC 338
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVK---------------TGL 60
LL A+ + + SLH +++GL S L + ALI+ Y K
Sbjct: 116 LLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESG 175
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQG-MKTNSSTFVGLL 118
+ +K+FD + +DVV WN +I +A+NG+ EAL ++++M G +K +S T +L
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL 234
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS-HLNVLTALIDMYVKTG 59
M + ++ S + +L A G +G +H + Q+ L + + T+L+DMY K G
Sbjct: 230 MQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCG 289
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ +++FDS+ +DVV WN +I A +G AL L M G+K + TF+ + +
Sbjct: 290 NLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFT 349
Query: 120 ACPAS 124
AC S
Sbjct: 350 ACSYS 354
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 31/152 (20%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMY----- 55
M S L T+ +L A G + GK +HGY ++GL + V +L+ MY
Sbjct: 98 MLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGD 157
Query: 56 --------------------------VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K G V R FD +KD +W +I Y +N
Sbjct: 158 VVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQN 217
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E+LYL + M++ + + S FV +LSAC
Sbjct: 218 SCFKESLYLFRLMQLTDIVPDESIFVSILSAC 249
>Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36649387-36650467 | 20130731
Length = 316
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++L + +GK +HG + G + L ALI+MY K G + + RK+FD +
Sbjct: 111 TLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ V W+ ++ ++ +G E + +M G + +S +F +L+AC
Sbjct: 171 CERNEVTWSTMMADFGMHGRFEEVFEMFNRMVEVGERMDSVSFTVVLTAC 220
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A V GK +H I +GL +L V +LI+MY K G + + + DKD
Sbjct: 342 VLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKD 401
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V WN ++ + NG EA+ + ++M G++ + TF GLL C
Sbjct: 402 LVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTC 447
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 17 LPAAGDTGNFVVGKSLHGYCI-QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
L A D G +G+ +H + + G+ L++ ALI+MY K G + RK+FD+ +KD
Sbjct: 184 LSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKD 243
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W +I +A +G EAL L +M + N TF+G+L AC
Sbjct: 244 VTTWTSMIVGHAVHGEAREALQLFSEMNFI-VSPNDVTFIGVLMAC 288
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
I S S + L ++V+GK LH I+ G S + + T+L+ +Y G + +
Sbjct: 73 IDSFSFLYTLKACINKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQ 132
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+FD + +K+++ W LI Y N + L L + M + ++ + LSAC
Sbjct: 133 VFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTALSAC 187
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T+ L A + GK HG I++G + V AL+DMY K G +
Sbjct: 255 GVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSA 314
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F S + VV W +I A+NG GEAL + +M+ ++ N TF+ +L AC
Sbjct: 315 WTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYAC 371
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G +H ++ G + V +L+DMY+K + G K FD + KDV W +
Sbjct: 177 MGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCL 236
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ G AL ++ KM+ G+K N T L+AC
Sbjct: 237 QWGEPRMALAVIAKMKKMGVKPNKFTLATALNAC 270
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCI--QIGLSSHLNVLTALIDMYVKT 58
M G+ + T+ +LP N GK H Y + + +L + +L++MY ++
Sbjct: 420 MLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRS 479
Query: 59 GLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
G V RK+FDSL KD V + +I Y +G AL L +MR +K + T V +L
Sbjct: 480 GKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVL 539
Query: 119 SACPAS 124
AC S
Sbjct: 540 IACSHS 545
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+I T +L A G+ ++ G ++H + + L V AL+ MY + G
Sbjct: 184 MLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGK 243
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+ R++FD + +D V WN +I YA GL EA L MR G++ N
Sbjct: 244 LEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERN 293
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L A G +GK +HG+ ++ NV LI MY + ++ +F + +K +
Sbjct: 335 LNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGL 394
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ WN ++ +A E +LL++M +G++ N T +L C
Sbjct: 395 ITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLC 439
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + T ++ A + G+ LHG I GL ++L + ALIDMY K G
Sbjct: 301 MVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGN 360
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V KIF + ++V W ++ Y +G EA+ L +M G+K + F+ +LSA
Sbjct: 361 VADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSA 420
Query: 121 C 121
C
Sbjct: 421 C 421
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 15 ILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
I + A G+ +GK +H I G S+L V+ A++DMY + +++F + K
Sbjct: 215 IAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQK 274
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
D + WN LI + E+L + +M +G N TF +++AC
Sbjct: 275 DTITWNTLIAGFETLDSY-ESLCIFSQMVSEGFSPNCFTFTSVIAAC 320
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHW 63
G + + ++ A + + VGK +H I+ + + ++V A + MY K G +H
Sbjct: 342 GFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHD 401
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R+IFD++ +++ V N +I YA++G E+L L + M + + N+ TF+ +LSAC
Sbjct: 402 ARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSAC 459
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKT---GLVHWGRKIFDSLVDKDVVLWNCLIGN 85
G HG I+ G + +V + LID+Y K G++ K+F+ + D+VLWN +I
Sbjct: 262 GMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLEC-MKVFEEIPKPDLVLWNTMISG 320
Query: 86 YARN-GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++++ L +AL ++M+ G + +FV ++SAC
Sbjct: 321 FSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISAC 357
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ LLPA G + G+ LHG + GL S++ V +L+ MY + G +F ++
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+D++ WN ++ ++ +G A+ LL +M N TF LSAC
Sbjct: 514 PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC 563
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
VGK+LH C++ + + L++MY K G + + + +FD + D++ WN +I +
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R G +A+ M G+ +S +++AC S
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRS 261
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVG-KSLHGYCIQIGLSSHLNVLTALIDMYVKTG 59
M +G+ S+ + ++ A +G G + +HGY ++ GL S++ V T+L+ Y G
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
V K+F+ + + ++V W L+ YA NG E L + + +R G+ +T ++
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358
Query: 120 AC 121
C
Sbjct: 359 TC 360
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL-SSHLNVLTALIDMYVKTGLVH 62
+GLI + +T+ ++ G G+ +G + G I+ GL +S ++V +LI M+ V
Sbjct: 344 NGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVE 403
Query: 63 WGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
++F+++ ++D + WN +I A NG E+L MR KT+ T LL AC
Sbjct: 404 EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463
Query: 123 ASESI 127
+++ +
Sbjct: 464 SAQHL 468
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 24 GNFVV---GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWN 80
GN V G+ LH + I++G VL A +DMY K G + +I + WN
Sbjct: 764 GNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWN 823
Query: 81 CLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
LI AR+G +A +M G+K + TFV LLSAC
Sbjct: 824 ILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSAC 864
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARN 89
K +H + I + +L + L+ MY K GL+ +K+ + ++DVV WN LIG +A +
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADD 629
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ MR +G+ +N T V LL C
Sbjct: 630 KDPNATIQAFNLMRREGLLSNYITIVNLLGTC 661
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + T++ L+ A + G G +H + ++ + + V TA +DMY K G ++
Sbjct: 361 GIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLA 420
Query: 65 RKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
++FD + D+D + +IG +A +G +AL L +KM+ +G+ +S+TFV + AC
Sbjct: 421 CQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFAC 479
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 47 VLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG------------- 93
V +L++ Y K G + R IFD + + D+ WN ++ YAR+
Sbjct: 289 VQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSL 348
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
E+LYL + M++ G++ N T V L+SAC
Sbjct: 349 ESLYLFRDMQVIGIRPNEVTIVALISAC 376
>Medtr4g086270.1 | PPR containing plant-like protein | HC |
chr4:33780755-33778471 | 20130731
Length = 565
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 64/123 (52%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ A A+ IL G + + K +H Y +Q S + +I+MY +
Sbjct: 215 GIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYGNCKSMTDA 274
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
R++FD + ++++ W+ +I YA + + E L L ++M G++ S T + +LSAC ++
Sbjct: 275 RRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLAVLSACGSA 334
Query: 125 ESI 127
E++
Sbjct: 335 EAV 337
>Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36615461-36616774 | 20130731
Length = 316
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T+ ++L + +GK +HG + G + L ALI+MY K G + + RK+FD +
Sbjct: 111 TLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGM 170
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++ V W+ ++ Y +G E + +M G + ++ +F +L+AC
Sbjct: 171 CERNEVTWSTMMAGYGMHGRFEEVFEMFNRMVEVGERMDNVSFTVVLTAC 220
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ TV +LP + + + G +H + ++ GL S + V ALI+MY K G
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ + +FD + +D+V WN +I Y +N AL + M++ G++ + T V L S
Sbjct: 273 LQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
+ V GK +H ++G + V +L+ +Y + G++ K+F + KDV WN +I
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 85 NYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+ +NG AL +L +M+ +G+K ++ T +L C S+ +
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%)
Query: 7 IASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRK 66
I + T + ++PA G G +H I+ L + V T LID+Y K G +
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMS 482
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
+F + V WN +I + +G EAL L + M + +K + TFV LLSAC S
Sbjct: 483 LFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 28 VGKSLHGYCIQIG-LSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
+ +S+ G+ I+ L + + AL++MY K G ++ +FD L KD + WN L+ Y
Sbjct: 341 ISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGY 400
Query: 87 ARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSA 120
+NGL EA+ M + N T+V ++ A
Sbjct: 401 TQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA 435
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
N K LH + G S ++ + T LI++YV G + R FD + K++ WN +I
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 85 NYARNGLVGEALYLLQKMRIQ----GMKTNSSTFVGLLSAC 121
Y R G EA+ + ++ ++ + TF +L AC
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ + S ++ +L A+ G G+ +H + + + T L+DMY K G +
Sbjct: 241 GIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEES 300
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
R +FD ++++D+ W +I A + EAL L ++ +G + + FVG+L+AC
Sbjct: 301 RDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNAC 357
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 38/153 (24%)
Query: 6 LIASASTVLILLPA---AGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMY------- 55
L A+ T LL A D N V G +H + +++G + ++ V ALI Y
Sbjct: 103 LNANQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVS 162
Query: 56 ----------------------------VKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
V+ G V K+FD + +DVV W+ +I Y
Sbjct: 163 EYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYV 222
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+NG + + L + MR +G++ N S V +LSA
Sbjct: 223 QNGKLEDGLECFRLMREKGIRPNESILVTMLSA 255
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSS---HLNVLTALIDMYVKTGLVHWGRKI 67
+T+++ L A G G+ G+ +H + ++ G++S ++V AL+DMY K G V +
Sbjct: 217 ATLVVTLSACGAIGSLDFGRKVHSF-VRDGVNSFGESISVFNALVDMYAKCGAVEEAYET 275
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM-KTNSSTFVGLLSAC 121
F ++ K+VV WN +I +A +G EAL L +M + + + + TF+ +L AC
Sbjct: 276 FSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCAC 330
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+GK LH + G +H V +LI MY + ++F+ + ++V WN +I +
Sbjct: 128 LGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHV 187
Query: 88 RNGLVGEALYLLQKMRIQ---GM--KTNSSTFVGLLSACPASESI 127
G EA+ L KM Q GM + + +T V LSAC A S+
Sbjct: 188 YCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSL 232
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 19 AAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVL 78
A G GK HG I++G + V +AL+DMY K G V + K+F +V+ VV
Sbjct: 235 ACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVP 294
Query: 79 WNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
+ +I A+ GL +L L Q+M + +K NS TFVG+L
Sbjct: 295 YTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVL 334
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T L+ A N G+ +H G S L V ++LIDMY K V + IFD +
Sbjct: 126 TFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFM 185
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKM-RIQGMKTNSSTFVGLLSACPA 123
++VV W +I Y++NG AL L ++ I+ K N ++AC +
Sbjct: 186 WVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTACAS 238
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
LP+A T H ++ GLS+ LI+ Y+K + K+FD + +V
Sbjct: 39 LPSATPT---------HANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNV 89
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
V W+ L+ Y R G AL L +M+ + N TF L++AC
Sbjct: 90 VSWSLLMAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINAC 134
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G TV +LP GK +H Y ++ ++++ ++L+ MY K G+
Sbjct: 413 MQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGV 472
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
V + ++F + ++V+ W +I +Y NG + EAL +++ M++ + +S +LS
Sbjct: 473 VEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSV 532
Query: 121 C 121
C
Sbjct: 533 C 533
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQI-GLSSHLNVLTALIDMYVKTG 59
M G+ ++ + I+LP G+ +G+ +H + ++ + + V +ALIDMY K G
Sbjct: 311 MVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCG 370
Query: 60 LVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ R +F S +++VV W L+ YA G + +AL + M+ +G + + T +L
Sbjct: 371 DLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLP 430
Query: 120 AC 121
C
Sbjct: 431 IC 432
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 26 FVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLV--DKDVVLWNCLI 83
F G H I+ GL + T LID+Y K G V R++F+ + ++DVV+W ++
Sbjct: 233 FYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTML 292
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNS 111
++ N L E L ++ M +G+ NS
Sbjct: 293 SGFSHNRLQREVLEYVKWMVEEGIYPNS 320
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G+ +A+T L+ A T + +GK +H + GL + +LT L+ MY G +
Sbjct: 105 NGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLED 164
Query: 64 GRKIFDSLVDKDVVL-WNCLI-GNYARNGLVGEALYLLQ---KMRIQGMKTNSSTFVGLL 118
K+FD L D+ V WN L+ G G + + +++ KMR G++ N +F ++
Sbjct: 165 ALKLFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVI 224
Query: 119 ---SACPA 123
+A PA
Sbjct: 225 KSFAAAPA 232
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 1 MCW------SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDM 54
+CW G + T+ +L A+ G +H + +++ L L++ +LI
Sbjct: 271 LCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISF 330
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
Y K G V KIF +V+ +VV N +I + +NG EAL + ++M+ + ++ N TF
Sbjct: 331 YAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTF 390
Query: 115 VGLLSAC 121
+ +LSAC
Sbjct: 391 LAVLSAC 397
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLS--------------SHLNVLTALIDM 54
+++T+ I++ G+ G G +HG ++G L TA+I
Sbjct: 170 NSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRR 229
Query: 55 YVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTF 114
+V G + ++FD+L +KD +W LI + N EAL +M +G K N T
Sbjct: 230 FVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTI 289
Query: 115 VGLLSA 120
+L+A
Sbjct: 290 SSVLAA 295
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 16/106 (15%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A +G G+ +H IQ+G +L+V ALI MY K G++ IF+++V KD
Sbjct: 215 LLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKD 274
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
VV WN +I VG MRI G+ ++ TF+G+LS+C
Sbjct: 275 VVTWNSMI--------VG--------MRIMGVNPDAVTFLGILSSC 304
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%)
Query: 17 LPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDV 76
L G +F G H I+IG +++ V ++LI +Y + GL+ ++FD + ++V
Sbjct: 115 LSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNV 174
Query: 77 VLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
V W +I +A+ V L L ++MR +K N T+ LLSAC S
Sbjct: 175 VSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGS 222
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 11 STVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDS 70
S+V I LP VG +H + G S V +L+DMY K G + IF+
Sbjct: 355 SSVSIFLPVE-------VGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNIFNE 407
Query: 71 LVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ KD+V WN ++ + NG V + L +++R +GM + T +L AC
Sbjct: 408 IKTKDLVSWNTIMMGLSYNGKVCVTMDLFEELRREGMPPDRITLAAVLLAC 458
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
+L A G G+ +H Y + G+ + T L+D+Y K G V R+ F+S +KD
Sbjct: 251 VLSACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKD 310
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQ---KMRIQGMKTNSSTFVGLLSAC 121
V WN ++ +A + G+ L LL+ +M +G+K + TF+G+L C
Sbjct: 311 VFTWNAMLVGFA---IHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGC 356
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+ +G+ +HG ++ G +++ V ALIDMY K G + +K+ + + KD V WN +I
Sbjct: 148 GDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSII 207
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
NG+V EAL LL+ M + ++ N T+ ++
Sbjct: 208 TACVANGVVYEALDLLENMLLSELEPNVVTWSAVI 242
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ A T+ +LPA VGK LHGY ++ L S+ V AL+ MY + G
Sbjct: 261 MVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGD 320
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+ KIF K +N +I Y NG VG+A L +M +G++ +
Sbjct: 321 MKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERD 370
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L TV I+L A GK +H Y I+ G S ++ L+DMY K G +
Sbjct: 536 SSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKH 595
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
++++ + + ++V N ++ YA +G E + + ++M ++ + TF+ +LS+C
Sbjct: 596 CYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVH 655
Query: 124 SESI 127
+ SI
Sbjct: 656 AGSI 659
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
G+ + T+ +L D GK +H I GL S+ V AL++MY K +
Sbjct: 400 EGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIA 459
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
+ FD + ++D WN LI YAR +G+ L+++M+ G + N T+ +L+
Sbjct: 460 AQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILA 515
>Medtr6g034150.1 | PPR containing plant-like protein | HC |
chr6:11544927-11542116 | 20130731
Length = 451
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
A S L LL D + +GK +H + + ++ + LI +YVK G V RK+
Sbjct: 89 ADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKV 148
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
FD + D++V N +I Y NGL + L + ++M QG+ + TF +L+ C
Sbjct: 149 FDKMPDRNVGSLNLMICGYNVNGLGIDGLLVFKQMSQQGVVPDEETFALVLTVC 202
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 31/128 (24%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIG 84
N +G LH + G + L V +I MYVK G++ RK+FD + +DVV W LI
Sbjct: 124 NPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIV 183
Query: 85 NYAR-------------------------------NGLVGEALYLLQKMRIQGMKTNSST 113
YAR N + +AL +KMR G+ T+ T
Sbjct: 184 AYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEIT 243
Query: 114 FVGLLSAC 121
VG +SAC
Sbjct: 244 LVGAISAC 251
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 38 QIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALY 97
+ G S++ V +ALIDMY K G V +F + + +V ++ +I +A +G A+
Sbjct: 271 RFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIK 330
Query: 98 LLQKMRIQGMKTNSSTFVGLLSAC 121
L +M G+K N TFVGL +AC
Sbjct: 331 LFYEMLENGIKPNHVTFVGLFTAC 354
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
GL S+ V +L + + + G +HG+ + G + + V TAL+D+Y K G V
Sbjct: 99 GLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTA 158
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQ 105
RK+FD + DK+VV WN L+ Y + G + E ++ ++
Sbjct: 159 RKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLK 199
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L T+ ++ A GN + + G+ ++ TALID+Y K G +
Sbjct: 325 SSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDK 384
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
++F L +DVV ++ +I NG +A+ L ++M + + N T+ G+L+A
Sbjct: 385 AYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTA 441
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVL--TALIDMYVKTGLVHWGRK 66
ST++ +L A G+ +GK +HG I + S LNV+ T+LIDMYVK+G + G +
Sbjct: 73 EESTLVNVLSACTHLGSPDLGKCIHG--ILLRNISELNVVVKTSLIDMYVKSGCLEKGLR 130
Query: 67 IFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F ++ +K+ + +I A +G EAL + +M +G+ + +VG+ SAC
Sbjct: 131 VFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSAC 185
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 39 IGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYL 98
+GL + V +LI+MY K G + +F+ + +K V W+ +IG +A + E L L
Sbjct: 1 MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 60
Query: 99 LQKMRIQGM-KTNSSTFVGLLSAC 121
L KM +G + ST V +LSAC
Sbjct: 61 LGKMSSEGRCRVEESTLVNVLSAC 84
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%)
Query: 12 TVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL 71
T + A D +G + + + GLS +++V +++ MY + GL+ + FDS+
Sbjct: 513 TFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI 572
Query: 72 VDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
DKD++ WN ++ +A+NGL + + + M K N ++V +LS C
Sbjct: 573 DDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGC 622
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC G + T +L A T + G LH +++ S L LIDMY K G
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +++F SL + D + WN LI GL +AL L +MR + + +L
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGV 388
Query: 121 CPASE 125
C +
Sbjct: 389 CSGPD 393
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 31/125 (24%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTG----------------LVHW-------- 63
G+ LHGY I+ G+ S V A+I MY K G + W
Sbjct: 397 TGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456
Query: 64 -------GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVG 116
R FD + ++++V WN ++ Y +NG E L L MR G++ + TF
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516
Query: 117 LLSAC 121
+ AC
Sbjct: 517 SIRAC 521
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ HG ++ + ++ V +ALIDMY K + GR +FD + ++ + W LI Y +
Sbjct: 174 GRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGK 233
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+G V E L +M + + N TF+ +L AC
Sbjct: 234 HGQVVEVLDSFHRMISESFRPNYVTFLAVLVAC 266
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G T ++L N+ G+ +H + I +G + + L+ +Y K+G +
Sbjct: 48 TGFPVHPRTYSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLET 107
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +F++LV+KD WN +I Y + GL L +MR ++ + TF + AC
Sbjct: 108 AQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRAC 165
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 32 LHGYCIQIGLSS---------HLNVLT--ALIDMYVKTGLVHWGRKIFDSLVDKDVVLWN 80
+H YC+ G+ N++T +++ Y KTGLV R++FD + DKDV+ W
Sbjct: 227 MHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWG 286
Query: 81 CLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+I Y + G + EAL + + M G N V L+SAC
Sbjct: 287 TMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSAC 327
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G+ + T++ + A G GK H Y + + N+ ALIDMY K G
Sbjct: 440 MLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGS 499
Query: 61 VHWGRKIFDSLVDK--DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
++ + F+ + D+ V WN +I A +G L + M+ +K N TF+G+L
Sbjct: 500 INSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVL 559
Query: 119 SAC 121
SAC
Sbjct: 560 SAC 562
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 36 CIQ--IGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
C+Q +G+ HL AL ++K G++ K FD + +DV W+ +I YA++
Sbjct: 372 CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPK 431
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSA 120
AL L KM G+K N T V + SA
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSA 458
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
++ YV+ G + RK+FD + +K V + +I + +NG EAL + + MR G+ N
Sbjct: 125 MVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPN 184
Query: 111 SSTFVGLLSAC 121
T V ++SAC
Sbjct: 185 DLTLVNVISAC 195
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G++ + T++ ++ A G + + +HG +++ + + V T L+ Y V
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREA 239
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQ 100
R++FD + ++++V WN ++ YA+ GLV EA L
Sbjct: 240 RRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFD 275
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +H ++GL + + +LI+MY K G + + +FD D V N ++ Y R
Sbjct: 72 GRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
NG + A L M +G + ++ +G +
Sbjct: 132 NGQIDNARKLFDVMPNKGCVSYTTMIMGFVQ 162
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
G+F K +HG ++ + + + AL+DMY K G V +++F+ +V V +WN +I
Sbjct: 148 GSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMI 207
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
A +G +A + +M ++ + +S TFVG+L C
Sbjct: 208 NGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGC 245
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 31 SLHGYCIQIGLSSH-------LNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
S + +C Q ++ H L + +I+ VK+G +K+FD + +DVV WN +I
Sbjct: 47 STYAHCQQPNIAHHVFSRVMNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVI 106
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G Y +N +AL + + M ++ + TF +++ C
Sbjct: 107 GGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGC 144
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGR 65
LI + +L G G +GK +H ++ G S++ V +++MY K G V
Sbjct: 497 LIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAI 556
Query: 66 KIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
K+F + D+V WN LI Y + AL + KM+ +G+K + TFV ++SA
Sbjct: 557 KMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIKPDDITFVLIISA 611
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 24 GNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLI 83
++ V + +HG+ I+ G S++ V AL+DMY + G + K+++ L + V+W ++
Sbjct: 413 ADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMM 472
Query: 84 GNYARNGLVGEALYLLQ 100
YARNG EA L
Sbjct: 473 CGYARNGQPREAFSLFH 489
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
S L + T + +L A N G LH I+ G + V AL+ Y K G
Sbjct: 159 SSLRPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKN 218
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMR-IQGMKTNSSTFVGLLSACP 122
K+FD + ++D+ WN ++ + + + L M I G+K + T L+AC
Sbjct: 219 AFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACA 278
Query: 123 AS 124
AS
Sbjct: 279 AS 280
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALI------------ 52
GL T+ L A +G + GK +H + +++GL LNV ALI
Sbjct: 262 GLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDV 321
Query: 53 -------------------DMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVG 93
+Y++ G V G KIFD + +K+ V +N L+ RN
Sbjct: 322 VCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGL 381
Query: 94 EALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+A+ L +M +G++ + ++AC
Sbjct: 382 KAVELFIRMVEEGVELTDFSLSSGINAC 409
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + + T ++ A T +VGKS+HG + GL L + T LIDMY K G
Sbjct: 106 MKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQ 165
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKT 109
+ RK+F+ L +++VV W ++ Y G V +A + M ++ + +
Sbjct: 166 ISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRNVAS 214
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 48 LTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
T ++D Y K G + R +F+ +KDVV W+ LI Y +NG EAL + +M +
Sbjct: 246 FTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNV 305
Query: 108 KTNSSTFVGLLSA 120
+ VGL+SA
Sbjct: 306 IPDEFVLVGLMSA 318
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLS-SHLNVLTALIDMYVKTGLVHWGRKIFDSLVDK 74
L+ AA G+ + + + Y + +V++AL+DM K G + K+F + ++
Sbjct: 315 LMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPER 374
Query: 75 DVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPAS 124
D+V + +I ++ +G +A+ L +M ++G+ + + F +L+AC S
Sbjct: 375 DLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHS 424
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
SG + +L A G G+ +H Y + +++ T+LIDMY K G +
Sbjct: 302 SGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEM 361
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+++F+ L K++ WN IG A NG EAL + G + N TF+ + SAC
Sbjct: 362 AQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSAC 419
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+A+T + +L A G G +GK +HG + L V L+DMYVK V +++
Sbjct: 205 PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRL 264
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
FD + +KD+V W +I + E+L L +M G + + +LSAC
Sbjct: 265 FDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSAC 318
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 4 SGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHW 63
+G + TV +L + K +H ++ L + V + + +Y G
Sbjct: 103 NGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVG 162
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
K+FD + +DVV W LI Y + GL +A+ L +M + N++TFV +L AC
Sbjct: 163 ASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDV---APNAATFVSILGAC 217
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLI 83
+ +GK +H + + + L + +LI MY + G + R +F+ + + KDV+ WN +I
Sbjct: 346 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 404
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G YA +G +AL L ++M+ ++ TF+ +L+AC
Sbjct: 405 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNAC 442
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 8 ASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKI 67
+++++LL + G +G+ +H I G+ +++ TAL+DMY K+G + + R +
Sbjct: 210 PDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVV 269
Query: 68 FDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKM---RIQGMKTNSSTFVGLLSAC 121
F+ + ++V W+ +I A++G EAL L M + + N T++G+L AC
Sbjct: 270 FERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCAC 326
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H ++ GL S + V +I+ Y + + RK+FD + + +V WN ++
Sbjct: 130 GKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVE 189
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
N + + + KMR + + ++ V LLS C
Sbjct: 190 NVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVC 222
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A + + GK LH + I+ G S + +L++MY K G + + F + +
Sbjct: 494 LLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRG 553
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V W+ +IG A++G EAL + +M + N T V +L AC
Sbjct: 554 IVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCAC 599
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ +T+ +L + V K +H I+ G+ S V+ +L+D Y K + KIF
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIF 445
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +D+V + +I Y+++G EAL L +M++ +K + LL+AC
Sbjct: 446 EERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNAC 498
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD-SLVDKDVVLWNCLIGNYARN 89
LH + I+ G S H ++ L+ Y + + + D S + VV W+ LI Y +N
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EAL +M G+K+N TF +L AC
Sbjct: 62 GFHKEALLAFNEMCTLGVKSNEFTFPTVLKAC 93
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC G+ ++ T +L A + +GK +H + G S V L+ MY K G
Sbjct: 74 MCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQ 133
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+K+F +++ VV WN L + ++ + E + L ++M ++ N + +L+A
Sbjct: 134 FSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNA 193
Query: 121 C 121
C
Sbjct: 194 C 194
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+++HG +++G AL+DMY K G + +F ++ D V WN +I
Sbjct: 202 IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCV 261
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+ AL LL +M+ G N T L AC A
Sbjct: 262 LHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAA 297
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLI 83
+ +GK +H + + + L + +LI MY + G + R +F+ + + KDV+ WN +I
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G YA +G +AL L ++M+ ++ TF+ +L+AC
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNAC 516
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLI 83
+ +GK +H + + + L + +LI MY + G + R +F+ + + KDV+ WN +I
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G YA +G +AL L ++M+ ++ TF+ +L+AC
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNAC 516
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLI 83
+ +GK +H + + + L + +LI MY + G + R +F+ + + KDV+ WN +I
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G YA +G +AL L ++M+ ++ TF+ +L+AC
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNAC 516
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 25 NFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSL-VDKDVVLWNCLI 83
+ +GK +H + + + L + +LI MY + G + R +F+ + + KDV+ WN +I
Sbjct: 420 DLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 84 GNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G YA +G +AL L ++M+ ++ TF+ +L+AC
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNAC 516
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 16 LLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKD 75
LL A + + GK LH + I+ G S + +L++MY K G + + F + +
Sbjct: 494 LLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRG 553
Query: 76 VVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+V W+ +IG A++G EAL + +M + N T V +L AC
Sbjct: 554 IVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCAC 599
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 9 SASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIF 68
+ +T+ +L + V K +H I+ G+ S V+ +L+D Y K + KIF
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIF 445
Query: 69 DSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+ +D+V + +I Y+++G EAL L +M++ +K + LL+AC
Sbjct: 446 EERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNAC 498
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 31 SLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFD-SLVDKDVVLWNCLIGNYARN 89
LH + I+ G S H ++ L+ Y + + + D S + VV W+ LI Y +N
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 90 GLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
G EAL +M G+K+N TF +L AC
Sbjct: 62 GFHKEALLAFNEMCTLGVKSNEFTFPTVLKAC 93
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
MC G+ ++ T +L A + +GK +H + G S V L+ MY K G
Sbjct: 74 MCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQ 133
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+K+F +++ VV WN L + ++ + E + L ++M ++ N + +L+A
Sbjct: 134 FSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNA 193
Query: 121 C 121
C
Sbjct: 194 C 194
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G+++HG +++G AL+DMY K G + +F ++ D V WN +I
Sbjct: 202 IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCV 261
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+ AL LL +M+ G N T L AC A
Sbjct: 262 LHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAA 297
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 35 YCIQIGLSSHLN--VLTALIDMYVKTGLVHWGRKIF-DSLVDKDVVLWNCLIGNYARNGL 91
Y + L+ +N +L +LIDMY K G + +F + V + V WN +IG +A +G
Sbjct: 83 YTMVSALAIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGK 142
Query: 92 VGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
EA+ L ++M+++ + N TF+ LL+AC
Sbjct: 143 PEEAISLFEQMKVERVSPNKVTFIALLNAC 172
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 51 LIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTN 110
+ID Y+K G V KIF ++ +K+V+ W +I + R G+ EAL LLQ+M + G+K +
Sbjct: 183 MIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPD 242
Query: 111 SSTFVGLLSAC 121
T LSAC
Sbjct: 243 KITLSCSLSAC 253
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M +G+ T+ L A G GK +H Y + + + ALIDMYVK G
Sbjct: 234 MLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGE 293
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ +F L K V W +IG +A +G EAL +M+ G+K S TF +L+A
Sbjct: 294 MKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTA 353
Query: 121 C 121
C
Sbjct: 354 C 354
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 30 KSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVH--WGRKIFDSLVDKDVVLWNCLIGNYA 87
K +HG ++ G H ++ L+ Y + + R +FD + + V+WN +I Y+
Sbjct: 28 KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYS 87
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPA 123
+ EAL L +M + N+ TF LL AC A
Sbjct: 88 NSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSA 123
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 5 GLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWG 64
G+ A+ V +L G +GK +H I+ + V L++MY K G +
Sbjct: 347 GMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDS 406
Query: 65 RKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSAC 121
+F + K+ V WN +I +AR+G +AL ++MR++G+ TF+ LL AC
Sbjct: 407 LLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHAC 463
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
V + +HG G + V ALI Y K GRK+FD +++++VV W +I A
Sbjct: 167 VTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLA 226
Query: 88 RNGLVGEALYLLQKMRIQG-MKTNSSTFVGLLSAC 121
+N ++L L +MR G + N T++ L AC
Sbjct: 227 QNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMAC 261
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
G+ +HG ++G+ S L + +AL+D+Y K G + +IF+S + D V ++ +A+
Sbjct: 270 GQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQ 329
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLL 118
NG EA+ + KM GM+ +++ +L
Sbjct: 330 NGFEEEAIQIFTKMVALGMEVDANMVSAVL 359
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGL 60
M G + T+ ++ + G +H + +++ L+V +LI Y K G
Sbjct: 362 MLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGS 421
Query: 61 VHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSA 120
+ K F+ D+V W LI YA +GL ++ + +KM G+K + F+G+LSA
Sbjct: 422 ITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSA 481
Query: 121 C 121
C
Sbjct: 482 C 482
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 28 VGKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYA 87
+G LH + +++G V AL+ +Y K G V R++F + +D+V+WN ++ Y
Sbjct: 185 MGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYV 244
Query: 88 RNGLVGEALYLLQKMRIQGMKTNSSTFVGLLS 119
N L EA + MR+ + + TF LLS
Sbjct: 245 FNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLS 276
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 29 GKSLHGYCIQIGLSSHLNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYAR 88
GK +H ++ S + V +ALI+MY K+ + R++FD + ++VV WN +I +
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 89 NGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACPASESI 127
+G E + L+++M +G + T ++S+C + +I
Sbjct: 349 HGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAI 387
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 1 MCWSGLIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGLSSHLN-------VLTALID 53
MC + ++ LL A G + GK H Y ++ L N V+ ALID
Sbjct: 77 MCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDLAVINALID 136
Query: 54 MYVKTGLVHWGRKIFDSLV--DKDVVLWNCLIGNYARNGLVGEALYLLQKM 102
MY K + R +FD + D+DVV W +IG YA+ G AL L +M
Sbjct: 137 MYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEM 187
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 29 GKSLHGYCIQIGLSSH--LNVLTALIDMYVKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 86
GK +H + ++ S+ L V LIDMY K+G V + +FDS+ ++ V W L+ Y
Sbjct: 353 GKQIHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 412
Query: 87 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLSACP 122
+G +A + +MR + + + TF+ +L AC
Sbjct: 413 GMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACK 448
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 6 LIASASTVLILLPAAGDTGNFVVGKSLHGYCIQIGL--SSHLNVLTALIDMYVKTGLVHW 63
++ + T+ +L + + GK +H Y ++ L S L V LIDMY K+G V
Sbjct: 194 IVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDT 253
Query: 64 GRKIFDSLVDKDVVLWNCLIGNYARNGLVGEALYLLQKMRIQGM 107
+ +FDS+ ++ + W L+ Y +G +A + +MR + +
Sbjct: 254 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEAL 297