Miyakogusa Predicted Gene

Lj0g3v0076579.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0076579.2 tr|C1N2V4|C1N2V4_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5167,34.95,4e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Protein of unknown function DUF775;
DUF775,Prote,CUFF.3874.2
         (169 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077260.1 | OPI10-like protein | HC | chr5:32979343-329805...   255   1e-68

>Medtr5g077260.1 | OPI10-like protein | HC | chr5:32979343-32980507
           | 20130731
          Length = 190

 Score =  255 bits (652), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/190 (70%), Positives = 139/190 (73%), Gaps = 21/190 (11%)

Query: 1   MFGVVFPNRSFPIDISTFAQIDTFHWILDMNHFVGEAYDQVTEVCIFLLNGFTL------ 54
           MFGVVFPNRSFP+DISTF+QIDTFHWILDMN FVGEAYDQVTE+CIFLLN FTL      
Sbjct: 1   MFGVVFPNRSFPMDISTFSQIDTFHWILDMNTFVGEAYDQVTEICIFLLNNFTLPPDKAL 60

Query: 55  ---------------XXXXXXXXXXXXXXXXXXXXXXXXXQLTADAQPLSAKIGVSVEDL 99
                                                   QLTADA P+SAKIGVSVEDL
Sbjct: 61  AVYVQSPGSPFVFCGAVTIARPSAVLSLLWPEPGSGAIQPQLTADAVPISAKIGVSVEDL 120

Query: 100 ATLPSLDVAGEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFIKFQERAKR 159
           A+L S+DVAGEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWF KFQERAKR
Sbjct: 121 ASLNSIDVAGEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQERAKR 180

Query: 160 DPEYLKGFAL 169
           DPEYLKGFAL
Sbjct: 181 DPEYLKGFAL 190