Miyakogusa Predicted Gene

Lj0g3v0076259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0076259.1 tr|A9T4G5|A9T4G5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140119,32.59,6e-18,seg,NULL,CUFF.3846.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g049270.1 | plant/MWL2-17 protein, putative | HC | chr5:21...   241   3e-64
Medtr5g049260.1 | plant/MWL2-17 protein, putative | HC | chr5:21...   241   3e-64

>Medtr5g049270.1 | plant/MWL2-17 protein, putative | HC |
           chr5:21596435-21597196 | 20130731
          Length = 253

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/255 (57%), Positives = 170/255 (66%), Gaps = 9/255 (3%)

Query: 1   MEDVITEAAPPSRLLEEDLNXXXXXXXXXXXXXXIFPH-HQQQQPLKPTXXXXXXXXXXX 59
           MEDVITEAAPPSRLLEEDLN              +FPH  QQQQPLKPT           
Sbjct: 1   MEDVITEAAPPSRLLEEDLNNFTPSSPPLPSPFLLFPHTQQQQQPLKPTLLIIAISSPSL 60

Query: 60  XXXXXXXTPQTLTASLILPE-----SNTFLDLHSLSPTSLLAAVRTPIPAHRAVAVAKLL 114
                  TPQTLT+SLILPE      N  +++HSLS T LLAAV+ PIP +RA AVA++L
Sbjct: 61  SLFHNLLTPQTLTSSLILPELPLSYPNNTINIHSLSSTILLAAVQNPIPDNRAYAVAEIL 120

Query: 115 LGDKIKPSSVIVLDSLDPRHHRGRLSSDLPIAFKLESSAER-AVXXXXXXXXXXYYPSGS 173
           L ++I P SVI+LDS+ P +HRG LSSD  +AFKLES AER             YYPSGS
Sbjct: 121 LSNQICPDSVIILDSIQPMNHRGLLSSDEAVAFKLESFAERKKANEEKLLGGLDYYPSGS 180

Query: 174 IVEGLAAAILARCQILKLRASLCVSWPQFDASAVLLVKDLLQRGALRGFDFGLSDDQALK 233
           +V+GL AAIL RCQILK+RASLCV+WPQFD+  VLL+KDLL+      F+FG SDD+  K
Sbjct: 181 VVDGLGAAILGRCQILKIRASLCVTWPQFDSDVVLLLKDLLRGLG--EFEFGFSDDEVFK 238

Query: 234 FGRSKDSEFPSHLYI 248
           FGRSKD  F SHLYI
Sbjct: 239 FGRSKDHVFQSHLYI 253


>Medtr5g049260.1 | plant/MWL2-17 protein, putative | HC |
           chr5:21592184-21593187 | 20130731
          Length = 253

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/255 (57%), Positives = 170/255 (66%), Gaps = 9/255 (3%)

Query: 1   MEDVITEAAPPSRLLEEDLNXXXXXXXXXXXXXXIFPH-HQQQQPLKPTXXXXXXXXXXX 59
           MEDVITEAAPPSRLLEEDLN              +FPH  QQQQPLKPT           
Sbjct: 1   MEDVITEAAPPSRLLEEDLNNFTPSSPPLPSPFLLFPHTQQQQQPLKPTLLIIAISSPSL 60

Query: 60  XXXXXXXTPQTLTASLILPE-----SNTFLDLHSLSPTSLLAAVRTPIPAHRAVAVAKLL 114
                  TPQTLT+SLILPE      N  +++HSLS T LLAAV+ PIP +RA AVA++L
Sbjct: 61  SLFHNLLTPQTLTSSLILPELPLSYPNNTINIHSLSSTILLAAVQNPIPDNRAYAVAEIL 120

Query: 115 LGDKIKPSSVIVLDSLDPRHHRGRLSSDLPIAFKLESSAER-AVXXXXXXXXXXYYPSGS 173
           L ++I P SVI+LDS+ P +HRG LSSD  +AFKLES AER             YYPSGS
Sbjct: 121 LSNQICPDSVIILDSIQPMNHRGLLSSDEAVAFKLESFAERKKANEEKLLGGLDYYPSGS 180

Query: 174 IVEGLAAAILARCQILKLRASLCVSWPQFDASAVLLVKDLLQRGALRGFDFGLSDDQALK 233
           +V+GL AAIL RCQILK+RASLCV+WPQFD+  VLL+KDLL+      F+FG SDD+  K
Sbjct: 181 VVDGLGAAILGRCQILKIRASLCVTWPQFDSDVVLLLKDLLRGLG--EFEFGFSDDEVFK 238

Query: 234 FGRSKDSEFPSHLYI 248
           FGRSKD  F SHLYI
Sbjct: 239 FGRSKDHVFQSHLYI 253