Miyakogusa Predicted Gene

Lj0g3v0075949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0075949.1 Non Characterized Hit- tr|J3N3Z3|J3N3Z3_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB10G2,38.51,3e-19,MUTS RELATED,NULL; DNA MISMATCH REPAIR MUTS
RELATED PROTEINS,NULL,CUFF.3840.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62
Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |...   235   2e-62

>Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |
           chr5:29049681-29066879 | 20130731
          Length = 699

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 527 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 586

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 587 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 646

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 647 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 698


>Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29066879 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798


>Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29067003 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798


>Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29066879 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798


>Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29066750 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798


>Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29067003 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798


>Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |
           chr5:29054350-29067003 | 20130731
          Length = 799

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%)

Query: 1   MEKFKQEYQELLAEGRHYLMHSRELHNSLLNTRRKIAEHSTKLRFKKMREVSEAAATARS 60
           MEK KQ+YQ LL E  HYLM SR LH SLL TRRKIAEHST LR KK+R+VSEAAA +RS
Sbjct: 627 MEKLKQDYQRLLTEADHYLMQSRGLHGSLLKTRRKIAEHSTSLRLKKLRDVSEAAAMSRS 686

Query: 61  DIHKKVREMDALAKQASQHKKSIKSSPSSATNSLHTAADNKKPTIADRSASAIKKLNQSS 120
            +HKKVRE+DA AK+ SQH K+IKSS  S TN+LHTAADNK+P   ++S S +KK ++SS
Sbjct: 687 ILHKKVRELDASAKKTSQHDKAIKSSRVSTTNNLHTAADNKEPASTNKSPSVVKKFDKSS 746

Query: 121 SDRFELPKVGDMVHVASLGKKVTVLKVDSSKGDIVVQAGNMKLKLKVTDIQR 172
           + R   PKVGD V+V+SLGKKVTVLKVDS KG+I+VQAG MKLKLKVTDIQR
Sbjct: 747 TVRSAAPKVGDAVYVSSLGKKVTVLKVDSPKGEILVQAGIMKLKLKVTDIQR 798