Miyakogusa Predicted Gene

Lj0g3v0075269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0075269.1 Non Characterized Hit- tr|I1KDQ8|I1KDQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,60.87,3e-18,PREDICTED
PROTEIN (FRAGMENT),NULL; GAG-POL-RELATED
RETROTRANSPOSON,NULL,CUFF.3773.1
         (74 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033925.1 | hypothetical protein | LC | chr6:11249145-1124...    59   1e-09
Medtr2g460640.1 | hypothetical protein | LC | chr2:24996058-2503...    55   2e-08
Medtr6g472230.1 | disease resistance protein (TIR-NBS-LRR class)...    54   3e-08
Medtr3g093120.1 | SPFH domain/band 7 family protein | LC | chr3:...    54   4e-08
Medtr3g452820.1 | cysteine-rich RLK (receptor-like kinase) prote...    50   5e-07

>Medtr6g033925.1 | hypothetical protein | LC |
          chr6:11249145-11248238 | 20130731
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 42/63 (66%)

Query: 9  VDASLFKQFVGSLRYLCNLRSDISYCVGLISKFMSAPKKSHLAVAKRILRYLQGTTDYVI 68
          VD  L++  +GSL Y+   R DI + V L ++F S P++SHL V KRI RYL+ TT+  +
Sbjct: 20 VDQKLYRGMIGSLLYIIASRPDILFSVCLCARFQSDPRESHLTVVKRIFRYLKETTNLGL 79

Query: 69 LFQ 71
          L++
Sbjct: 80 LYR 82


>Medtr2g460640.1 | hypothetical protein | LC |
          chr2:24996058-25036377 | 20130731
          Length = 155

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%)

Query: 4  TDEGDVDASLFKQFVGSLRYLCNLRSDISYCVGLISKFMSAPKKSHLAVAKRILRYLQGT 63
          T + D     ++  + SL YL   R DI + VGL ++F +APK+SH    KRILRYL GT
Sbjct: 12 TQKQDFSEKEYRGMIDSLLYLTASRPDIVFAVGLCARFQTAPKESHYIAIKRILRYLVGT 71

Query: 64 TDYVILFQ 71
              + ++
Sbjct: 72 PSVGLWYK 79


>Medtr6g472230.1 | disease resistance protein (TIR-NBS-LRR class),
          putative | LC | chr6:26054240-26059623 | 20130731
          Length = 1267

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 33/48 (68%)

Query: 23 YLCNLRSDISYCVGLISKFMSAPKKSHLAVAKRILRYLQGTTDYVILF 70
          YL   R DI Y V ++S+FM+  K+SH   AKR+LRY++GT +Y I F
Sbjct: 2  YLTTTRPDIFYAVNVLSRFMNCAKESHFKGAKRVLRYVKGTLNYGIKF 49


>Medtr3g093120.1 | SPFH domain/band 7 family protein | LC |
           chr3:42570339-42574091 | 20130731
          Length = 534

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 34/49 (69%)

Query: 14  FKQFVGSLRYLCNLRSDISYCVGLISKFMSAPKKSHLAVAKRILRYLQG 62
           +++ VG L YLC  R ++SY V ++S+FM  P++ H   A R++RYL+G
Sbjct: 313 YRRLVGRLIYLCFTRPELSYSVHILSQFMQQPREDHWTAALRVVRYLKG 361


>Medtr3g452820.1 | cysteine-rich RLK (receptor-like kinase)
          protein, putative | LC | chr3:19408629-19407615 |
          20130731
          Length = 187

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%)

Query: 9  VDASLFKQFVGSLRYLCNLRSDISYCVGLISKFMSAPKKSHLAVAKRILRYLQGT 63
          VD   +++ VG L YL + R DIS+ V  +S+FM++P + H+    RI++YL+ T
Sbjct: 16 VDKGRYQRLVGKLIYLSHTRPDISFVVCTMSQFMNSPTEEHMDAIYRIVKYLEMT 70