Miyakogusa Predicted Gene

Lj0g3v0074349.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074349.2 Non Characterized Hit- tr|I1K0J4|I1K0J4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,54.26,4e-19,coiled-coil,NULL; seg,NULL,CUFF.3712.2
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075060.1 | armadillo repeat kinesin-like protein | HC | c...   143   4e-35
Medtr5g011500.1 | armadillo repeat kinesin-like protein | HC | c...   116   6e-27

>Medtr7g075060.1 | armadillo repeat kinesin-like protein | HC |
           chr7:28170012-28154412 | 20130731
          Length = 888

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 80/96 (83%)

Query: 1   MKVENMLKIKEEFDYKSLSRKIDVQLDKLIAENERQQKAFENEVEKITLEAQCRIAEVER 60
           MKVENMLKIKEEFDYKSLSRK+++QLDKLIAENERQ KAFE+++EKI LEAQCRI EVER
Sbjct: 392 MKVENMLKIKEEFDYKSLSRKLEIQLDKLIAENERQHKAFEDDIEKINLEAQCRILEVER 451

Query: 61  NFADGLEKERLKCQMEYMXXXXXXXXXXXXNQERND 96
           NFA+ LE+E+LKCQMEYM            NQER+D
Sbjct: 452 NFANALEQEKLKCQMEYMGIVKELEQKLVLNQERHD 487


>Medtr5g011500.1 | armadillo repeat kinesin-like protein | HC |
           chr5:3314477-3323105 | 20130731
          Length = 894

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 73/96 (76%)

Query: 1   MKVENMLKIKEEFDYKSLSRKIDVQLDKLIAENERQQKAFENEVEKITLEAQCRIAEVER 60
           MKVENM+K+KEEFDYKSLSR++D++LDKLI E+ERQQKAFE+E+E++  EAQ +I+E ER
Sbjct: 398 MKVENMIKLKEEFDYKSLSRRLDIELDKLIMEHERQQKAFEDEIERLATEAQHQISEAER 457

Query: 61  NFADGLEKERLKCQMEYMXXXXXXXXXXXXNQERND 96
           N+ D LEKER K Q EYM            NQ +N+
Sbjct: 458 NYVDSLEKERSKYQKEYMESVKKLEEKFLMNQRKNE 493