Miyakogusa Predicted Gene

Lj0g3v0074139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074139.1 Non Characterized Hit- tr|B9G1U6|B9G1U6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,64.91,3e-18,seg,NULL,CUFF.3705.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109170.1 | hypothetical protein | HC | chr3:50475726-5047...   119   9e-28

>Medtr3g109170.1 | hypothetical protein | HC |
           chr3:50475726-50475048 | 20130731
          Length = 117

 Score =  119 bits (297), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 53/70 (75%), Positives = 64/70 (91%), Gaps = 1/70 (1%)

Query: 47  ADSDAT-IVCEPCNGKGWLLCDFCKGQKTNVKADNKRVYRRCPSCRAVGYVLCPSCKVFK 105
            D++ T I+C+PCNGKGWL+CDFC+GQKTNVKA N R+YRRCPSC+AVGYVLC +CKVFK
Sbjct: 45  VDTEETNIMCDPCNGKGWLVCDFCEGQKTNVKAPNNRIYRRCPSCKAVGYVLCSNCKVFK 104

Query: 106 CVTFPNFNDA 115
           CVTFP+FND+
Sbjct: 105 CVTFPHFNDS 114