Miyakogusa Predicted Gene

Lj0g3v0073989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073989.1 Non Characterized Hit- tr|I0Z0M1|I0Z0M1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,34.85,1e-17,seg,NULL; OLIGOPEPTIDASE,NULL; PROTEASE M3 THIMET
OLIGOPEPTIDASE-RELATED,NULL,CUFF.3704.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086040.1 | plant/F12A21-30 protein, putative | HC | chr3:...   306   1e-83
Medtr3g086040.2 | plant/F12A21-30 protein, putative | HC | chr3:...   228   5e-60

>Medtr3g086040.1 | plant/F12A21-30 protein, putative | HC |
           chr3:38929857-38932714 | 20130731
          Length = 227

 Score =  306 bits (783), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/219 (70%), Positives = 174/219 (79%), Gaps = 4/219 (1%)

Query: 1   MEVGMSLNALVRLPLSSSTSRLHDDPSLKXXXXXXXXXXXXXXXXXXXXXXVVEAKGKKG 60
           MEVGMSLNAL+  PLSSS+SR H+D                          VVEAK KKG
Sbjct: 1   MEVGMSLNALLHPPLSSSSSRFHND----SLFSMPRQFPRTQRQHQHHHVLVVEAKSKKG 56

Query: 61  MMSRQYQRXXXXXXXKIEEDGNPKFVLFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFL 120
           MMSRQYQR       KIE+DGNPKFV+FIRMANVYLWYPLSIV+GGTTAKIMVAAKDNFL
Sbjct: 57  MMSRQYQRQPPPPLPKIEDDGNPKFVVFIRMANVYLWYPLSIVSGGTTAKIMVAAKDNFL 116

Query: 121 GKYIYKDTLARNLAAVIYQDEKEVQKSAFKQYRVLRSATDFRYGYKLIENGNVRGALSTT 180
           GK+IYKDTL RNLAAVIY+DEKE+QKSAFKQ+RVL+SAT+FRYGYKL+ENGNV+ ALST+
Sbjct: 117 GKFIYKDTLDRNLAAVIYRDEKEIQKSAFKQHRVLKSATEFRYGYKLVENGNVKAALSTS 176

Query: 181 DVIELPTQDKLKTVLDNVKDFFGDAKESFGKITTSLGAT 219
           DVI+LPT DKLKTV D VKDFFGD KESFG+IT+ + AT
Sbjct: 177 DVIQLPTPDKLKTVADKVKDFFGDVKESFGEITSLVTAT 215


>Medtr3g086040.2 | plant/F12A21-30 protein, putative | HC |
           chr3:38929857-38932714 | 20130731
          Length = 194

 Score =  228 bits (580), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 117/168 (69%), Positives = 130/168 (77%), Gaps = 4/168 (2%)

Query: 1   MEVGMSLNALVRLPLSSSTSRLHDDPSLKXXXXXXXXXXXXXXXXXXXXXXVVEAKGKKG 60
           MEVGMSLNAL+  PLSSS+SR H+D                          VVEAK KKG
Sbjct: 1   MEVGMSLNALLHPPLSSSSSRFHND----SLFSMPRQFPRTQRQHQHHHVLVVEAKSKKG 56

Query: 61  MMSRQYQRXXXXXXXKIEEDGNPKFVLFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFL 120
           MMSRQYQR       KIE+DGNPKFV+FIRMANVYLWYPLSIV+GGTTAKIMVAAKDNFL
Sbjct: 57  MMSRQYQRQPPPPLPKIEDDGNPKFVVFIRMANVYLWYPLSIVSGGTTAKIMVAAKDNFL 116

Query: 121 GKYIYKDTLARNLAAVIYQDEKEVQKSAFKQYRVLRSATDFRYGYKLI 168
           GK+IYKDTL RNLAAVIY+DEKE+QKSAFKQ+RVL+SAT+FRYGYKL+
Sbjct: 117 GKFIYKDTLDRNLAAVIYRDEKEIQKSAFKQHRVLKSATEFRYGYKLV 164