Miyakogusa Predicted Gene

Lj0g3v0073929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073929.1 Non Characterized Hit- tr|E1ZCJ7|E1ZCJ7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,53.33,4e-19,BolA,BolA protein; no description,BolA protein;
BolA-like,BolA protein; BOLA-LIKE PROTEIN
CGI-143,NU,NODE_45233_length_469_cov_88.560768.path1.1
         (107 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g079650.1 | UV-induced protein uvi31 | HC | chr6:29053437-...   156   5e-39
Medtr1g047990.2 | Fe-S metabolism associated protein SufE | HC |...   123   4e-29
Medtr1g047990.1 | Fe-S metabolism associated protein SufE | HC |...   123   4e-29
Medtr1g047990.3 | Fe-S metabolism associated protein SufE | HC |...   123   4e-29
Medtr1g040145.1 | BolA family transcriptional regulator | HC | c...    51   3e-07

>Medtr6g079650.1 | UV-induced protein uvi31 | HC |
           chr6:29053437-29053120 | 20130731
          Length = 105

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 75/102 (73%), Positives = 92/102 (90%), Gaps = 1/102 (0%)

Query: 1   MSWRGGSAVLSRANRIKTKLQSALEATVLEVDDVSHQHAGHAAVRESSEKGETHFNLRIV 60
           MS+RG + +LSRA RI+TKLQS+L ATV+E+DDVS+QHAGHAA++ESSE+ ETHFNL+IV
Sbjct: 1   MSFRGTTTLLSRATRIQTKLQSSLSATVIELDDVSYQHAGHAAMKESSEQ-ETHFNLKIV 59

Query: 61  SPKFEGQSLVKRHRMVYDLLSDELQSGLHALSIVAKTPGEST 102
           S KFEG +LVKRHRMVY++L DEL+SGLHALSI+AKTP E T
Sbjct: 60  SEKFEGVNLVKRHRMVYEVLDDELKSGLHALSIIAKTPKEIT 101


>Medtr1g047990.2 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150454-18156048 | 20130731
          Length = 353

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 2/89 (2%)

Query: 12  RANRIKTKLQSALEATVLEVDDVSHQHAGHAAVRESSEKGETHFNLRIVSPKFEGQSLVK 71
           R  RIK KL+  L+   LEV+DVS+QHAGHA VR S   GETHFN+++VS +F+G+SLVK
Sbjct: 263 RGKRIKKKLEKELQPIELEVEDVSYQHAGHAGVRGSD--GETHFNVKVVSKEFQGKSLVK 320

Query: 72  RHRMVYDLLSDELQSGLHALSIVAKTPGE 100
           RHR++Y LL DEL SGLHALSIVAKTP E
Sbjct: 321 RHRLIYSLLQDELDSGLHALSIVAKTPSE 349


>Medtr1g047990.1 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150508-18156040 | 20130731
          Length = 353

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 2/89 (2%)

Query: 12  RANRIKTKLQSALEATVLEVDDVSHQHAGHAAVRESSEKGETHFNLRIVSPKFEGQSLVK 71
           R  RIK KL+  L+   LEV+DVS+QHAGHA VR S   GETHFN+++VS +F+G+SLVK
Sbjct: 263 RGKRIKKKLEKELQPIELEVEDVSYQHAGHAGVRGSD--GETHFNVKVVSKEFQGKSLVK 320

Query: 72  RHRMVYDLLSDELQSGLHALSIVAKTPGE 100
           RHR++Y LL DEL SGLHALSIVAKTP E
Sbjct: 321 RHRLIYSLLQDELDSGLHALSIVAKTPSE 349


>Medtr1g047990.3 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150502-18157210 | 20130731
          Length = 353

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 71/89 (79%), Gaps = 2/89 (2%)

Query: 12  RANRIKTKLQSALEATVLEVDDVSHQHAGHAAVRESSEKGETHFNLRIVSPKFEGQSLVK 71
           R  RIK KL+  L+   LEV+DVS+QHAGHA VR S   GETHFN+++VS +F+G+SLVK
Sbjct: 263 RGKRIKKKLEKELQPIELEVEDVSYQHAGHAGVRGSD--GETHFNVKVVSKEFQGKSLVK 320

Query: 72  RHRMVYDLLSDELQSGLHALSIVAKTPGE 100
           RHR++Y LL DEL SGLHALSIVAKTP E
Sbjct: 321 RHRLIYSLLQDELDSGLHALSIVAKTPSE 349


>Medtr1g040145.1 | BolA family transcriptional regulator | HC |
           chr1:14730710-14735741 | 20130731
          Length = 163

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 54  HFNLRIVSPKFEGQSLVKRHRMVYDLLSDELQSGLHALS-IVAKTPGES 101
           H ++ +VS  FEGQS V R RMVY  + +ELQS +HA+  +  KTP E+
Sbjct: 111 HVSIDVVSTAFEGQSAVNRQRMVYKAIWEELQSAVHAVDQMTTKTPAEA 159