Miyakogusa Predicted Gene

Lj0g3v0073749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073749.1 CUFF.3681.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g005710.1 | glucuronoxylan 4-O-methyltransferase | HC | ch...   373   e-103
Medtr8g080660.1 | polysaccharide biosynthesis protein | HC | chr...   215   4e-56
Medtr3g085270.1 | polysaccharide biosynthesis protein | HC | chr...   213   1e-55
Medtr7g029100.1 | polysaccharide biosynthesis protein | HC | chr...   183   2e-46
Medtr4g485570.1 | polysaccharide biosynthesis protein | HC | chr...   180   1e-45
Medtr4g485560.1 | polysaccharide biosynthesis protein | HC | chr...   176   2e-44
Medtr4g102900.1 | polysaccharide biosynthesis protein | HC | chr...   160   9e-40
Medtr4g094895.1 | polysaccharide biosynthesis protein | HC | chr...   159   2e-39

>Medtr3g005710.1 | glucuronoxylan 4-O-methyltransferase | HC |
           chr3:333758-332402 | 20130731
          Length = 298

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/299 (59%), Positives = 228/299 (76%), Gaps = 17/299 (5%)

Query: 1   MRPKPHQSLNLKLIIVA-VLVTLFVL----------SVLISNSSTSNLPPAGNSEA-KTS 48
           MR K   S NLKL+I++ V + LF++            L + S+T+N     + E  KT+
Sbjct: 1   MRSKTQLSSNLKLVIISLVFLFLFIMLFKSSIFSFTQPLTTTSNTNNDSKISSQETEKTT 60

Query: 49  KTDCS---LSSNCGKILASLSEALIHYATSSITPQQTLKEISVSARVLEKRSPCNFLVFG 105
           K++C    ++  C K   SL+ ALIHYAT+ ITPQQT++EISVSA+VL+K+SPCNFLVFG
Sbjct: 61  KSECPSLPITPTCTKNPPSLANALIHYATTKITPQQTIQEISVSAKVLQKKSPCNFLVFG 120

Query: 106 LGHDSLMWSALNHGGRTIFLEEDSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRG 165
           LGHDSLMW++LN+GGRT+FLEED  WIEQI+ +FP LESYHV YD+KV ++D LM++G  
Sbjct: 121 LGHDSLMWTSLNYGGRTVFLEEDKTWIEQIQSKFPTLESYHVVYDTKVHQSDELMKIGME 180

Query: 166 SE-CTAIGDPRYSMCGLALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLA 224
            E C  + DPR+S CGLALKG PSE+Y+  WDVIMVDAPTGY++ APGRMSAIYTAG++A
Sbjct: 181 QEDCKKVSDPRFSKCGLALKGFPSEIYDVEWDVIMVDAPTGYFDGAPGRMSAIYTAGLIA 240

Query: 225 RNRDKGGDTDVFVHDVNRVVEDKFSKAFLCDKYMNKQEGRLRHFTIPSHRDHLDKSFCP 283
           RNR+  GDTDVFVHDV+R VED+FSKAFLC+ Y+ +QEGR+RHF IPSHR  L + +CP
Sbjct: 241 RNRE-NGDTDVFVHDVDRKVEDQFSKAFLCEGYLREQEGRIRHFNIPSHRARLGRPYCP 298


>Medtr8g080660.1 | polysaccharide biosynthesis protein | HC |
           chr8:34716057-34714423 | 20130731
          Length = 297

 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 17/229 (7%)

Query: 68  ALIHYATSSITPQQTLKEISVSARVLEK-RSPCNFLVFGLGHDSLMWSALNHGGRTIFLE 126
           AL+HYATS + PQQ+  EI+V+  V++    P NFLVFGLGHDSLMW+  N  G+T+FLE
Sbjct: 72  ALLHYATSHVVPQQSFSEITVTLDVIKSLNRPFNFLVFGLGHDSLMWAGFNPQGKTLFLE 131

Query: 127 EDSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRG------SECTAIGDPRYSMCG 180
           ED  W++ + +  P L+++ V Y ++++EAD L++  +       ++ T  G+ +   C 
Sbjct: 132 EDPKWVQTVLKDAPELQAFTVHYRTQLQEADELLKSYKSEPSCSPAKATLKGNEQ---CK 188

Query: 181 LALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGDTDVFVHDV 240
           LAL  LP E+YET WD+IM+DAP GY+ EAPGRM+AI++  ++ARNR   G T VF+HDV
Sbjct: 189 LALHNLPDEIYETEWDLIMIDAPRGYFAEAPGRMAAIFSMTVMARNRKGSGVTHVFLHDV 248

Query: 241 NRVVEDKFSKAFLCDKYMNKQEGRLRHFTIP-------SHRDHLDKSFC 282
           +R VE  +++ FLC K + K  GRL HF IP       SH   +   FC
Sbjct: 249 DRKVEKVYAEEFLCRKNLVKGVGRLWHFEIPALGNNLSSHDSSIGSRFC 297


>Medtr3g085270.1 | polysaccharide biosynthesis protein | HC |
           chr3:38532337-38533773 | 20130731
          Length = 286

 Score =  213 bits (542), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 174/290 (60%), Gaps = 21/290 (7%)

Query: 3   PKPHQSLNLKLIIVAVLVT-LFVLSVLISNSSTSNL--PPAGNSEAKTSKTDCSLSSNCG 59
           P   + L + L  + ++V  LF+ + + +  ++S+L  P + +  A++++ +     N  
Sbjct: 8   PLQQRKLFIGLTTIGLIVAALFIATAITTFGTSSSLHCPISSSIRARSNEDN-----NPS 62

Query: 60  KILASLSEALIHYATSSITPQQTLKEISVSARVLEKRS-PCNFLVFGLGHDSLMWSALNH 118
            I      A++HYATS + PQQ++ EI +S  VL+    PCNFLVFGLGHDSLMW++ N 
Sbjct: 63  PIQL---RAILHYATSRVVPQQSVSEIKISFDVLKTYDRPCNFLVFGLGHDSLMWASFNP 119

Query: 119 GGRTIFLEEDSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRG------SECTAIG 172
           GG T+FLEED  W++ + +  P L ++ V Y ++++EA  L+   R       S+    G
Sbjct: 120 GGNTLFLEEDPKWVQTVLKDAPGLRAHTVRYRTQLREASKLISSYRKEPMCSPSKAFLRG 179

Query: 173 DPRYSMCGLALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGD 232
           +     C LAL+ LP EVY+T WD+IM+DAP GY+ EAPGRM+A+++A ++ARNR   G 
Sbjct: 180 N---KACKLALENLPDEVYDTEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGV 236

Query: 233 TDVFVHDVNRVVEDKFSKAFLCDKYMNKQEGRLRHFTIPSHRDHLDKSFC 282
           T VF+HDV+R VE  ++  FLC K + K  GRL HF I          FC
Sbjct: 237 THVFLHDVDRRVEKLYADEFLCKKNLVKGVGRLWHFQIAPFNGTDSPRFC 286


>Medtr7g029100.1 | polysaccharide biosynthesis protein | HC |
           chr7:10188526-10189425 | 20130731
          Length = 280

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 17/216 (7%)

Query: 69  LIHYATSSITPQQTLKEISVSARVLEKRSPCNFLVFGLGHDSLMWSALNHGGRTIFLEED 128
           + HYAT+   PQ +  EI     VL+  +PCNFLVFG+GHD+LMW + N  G T++LEED
Sbjct: 79  IFHYATTGDIPQLSKGEIRRPFDVLQSLAPCNFLVFGIGHDALMWDSFNPRGITLYLEED 138

Query: 129 SAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRGSECTAIGDPRYSMCGLALKGLPS 188
             W     +RFP+L ++ + Y++++                 + D R   C LAL  LP 
Sbjct: 139 PKWTISAFKRFPVLRAHTMRYNTRLNSH-------------PLKDDR--RCRLALGKLPK 183

Query: 189 EVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGDTDVFVHDVNRVVEDKF 248
           EVY+  WDVIM+DAP GY+  APGRM  IY+A ++AR R K G T VF+HDV+R VE  +
Sbjct: 184 EVYDRDWDVIMIDAPRGYFPSAPGRMGVIYSAAVMARGRKKAGVTHVFLHDVDREVEKLY 243

Query: 249 SKAFLCDKYMNKQEGRLRHFTIPSHRDHLDKS--FC 282
           +K FLC KY      RL HF IP   +  D +  FC
Sbjct: 244 AKEFLCMKYRVGGIRRLWHFVIPPAVNVTDTALGFC 279


>Medtr4g485570.1 | polysaccharide biosynthesis protein | HC |
           chr4:33372601-33371282 | 20130731
          Length = 310

 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 136/225 (60%), Gaps = 7/225 (3%)

Query: 64  SLSEALIHYATS--SITPQQTLKEISVSARVLEKRSPCNFLVFGLGHDSLMWSALNHGGR 121
           S+++AL+HYA+S  + T   + +EI+     L      NFL+FGL H+SL+WSALN  GR
Sbjct: 70  SVTKALLHYASSLNTTTKSMSFEEINAITTTLHLTPHPNFLIFGLTHESLLWSALNQNGR 129

Query: 122 TIFLEEDSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRGS---ECTAIGDPRYSM 178
           T+F++E+   I +  +  P +E+Y V + +KV E   L+   +     +C  + +  +S 
Sbjct: 130 TVFIDENEYMISKFEQSNPGIEAYDVQFTTKVSEYPKLLSHAKAKSKHDCKPVQNLLFSE 189

Query: 179 CGLALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGDTDVFVH 238
           C L +  LP+ +Y+  WDVI+VD P GY+  APGRMSAI+TA +LAR++ K G T +FVH
Sbjct: 190 CKLGINDLPNHIYQVSWDVILVDGPRGYFPAAPGRMSAIFTAAVLARSK-KMGKTHIFVH 248

Query: 239 DVNRVVEDKFSKAFLCDKYMNKQEGRLRHFTIPSHRDHLDKS-FC 282
           D  R VE  FS  FLC++ +     +L HF + S  D  + S FC
Sbjct: 249 DFGREVEKIFSYEFLCEENLVNNVDQLGHFVVKSETDSGESSEFC 293


>Medtr4g485560.1 | polysaccharide biosynthesis protein | HC |
           chr4:33368175-33367417 | 20130731
          Length = 252

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 135/224 (60%), Gaps = 7/224 (3%)

Query: 65  LSEALIHYATSS--ITPQQTLKEISVSARVLEKRSPCNFLVFGLGHDSLMWSALNHGGRT 122
           +++AL+HYA+SS   T   +  EI+     L      NFL+FGL  +SL+WSALN+ GRT
Sbjct: 21  ITKALVHYASSSNSTTKSMSFSEINAITTTLHLTPNPNFLIFGLTQESLLWSALNNNGRT 80

Query: 123 IFLEEDSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRGS---ECTAIGDPRYSMC 179
           +F++E+   I +  +  P +E+Y V + SKV E   L+   +     +C  + +  +S C
Sbjct: 81  VFIDENEYIISKFEQSNPGIEAYDVQFTSKVSEYPKLLSHAKEESKRDCKPVQNLLFSEC 140

Query: 180 GLALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGDTDVFVHD 239
            L +  +P+ +Y+  WDVI+VD P GY+  APGRMSAI+TA +LAR++ K G T VFVHD
Sbjct: 141 KLGINDMPNHIYQVSWDVILVDGPRGYFPAAPGRMSAIFTAAVLARSK-KVGKTHVFVHD 199

Query: 240 VNRVVEDKFSKAFLCDKYMNKQEGRLRHFTIPSHRDHLDK-SFC 282
             R VE  FS  FLC++ +     +LRHF I S  ++ +   FC
Sbjct: 200 FWREVEKIFSYEFLCEENLVNNVDQLRHFVIKSETENGESFEFC 243


>Medtr4g102900.1 | polysaccharide biosynthesis protein | HC |
           chr4:42658066-42659216 | 20130731
          Length = 298

 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 140/242 (57%), Gaps = 20/242 (8%)

Query: 49  KTDCSLSSNCGKILASLSEALIHYATSSITPQQTLKEISVSARVLEKRSPCNFLVFGLGH 108
           KT  +  S   KI+AS +     + +S+IT     KE  V + ++  +SPCN L+FG   
Sbjct: 69  KTTSTPFSTYNKIIASHT-----HESSNITTTFKEKEFKVLSNLIALKSPCNLLIFGFQP 123

Query: 109 DSLMWSALNHGGRTIFLEE--DSAWIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGRGS 166
             L+ S++N  G TIFL++  D     ++   F   + Y+  Y+   KEA  L++  R +
Sbjct: 124 QFLILSSMNEAGNTIFLDDNHDKTTTRKVTTNFNNTQIYNFNYNVPTKEAYKLLKHARNN 183

Query: 167 -ECTAIGDPRY---SMCGLALKGLPSEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGM 222
             CT   + R+   S C LALK LP+ VYE  WDVI+VD P+G   E+PGRM++IYTA +
Sbjct: 184 PACTP--NSRHLQTSKCKLALKNLPAIVYEKNWDVIVVDGPSGLSTESPGRMASIYTASV 241

Query: 223 LARNRDKGGDTDVFVHDVNRVVEDKFSKAFLCDKYMNKQEGRLRHFTIPSHRDHLDK-SF 281
           LAR    G  +DV VHDV+R++E  FS  FLCD+ +   +G+L HF I   R HL+  +F
Sbjct: 242 LARG---GNGSDVLVHDVDRMIEKWFSWEFLCDENLLYSKGKLWHFRI---RGHLNSTTF 295

Query: 282 CP 283
           CP
Sbjct: 296 CP 297


>Medtr4g094895.1 | polysaccharide biosynthesis protein | HC |
           chr4:39230376-39231956 | 20130731
          Length = 303

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 15/265 (5%)

Query: 13  LIIVAVLVTLFVLSVLISNSSTSNLPPAGNSEAKTSKTDCSLSSNCGKILASLSEALIHY 72
           L  +++L   F+ +++ +    S    A  S   T+     L        A++   L+HY
Sbjct: 29  LAFISILTLAFLATLIYTRDRESTTNTAIISSVITTPVSAPLP-------ATVINTLLHY 81

Query: 73  AT-SSITPQQTLKEISVSARVLEK-RSPCNFLVFGLGHDSLMWSALNHGGRTIFLEEDSA 130
           A+ S+ +   T  ++   + VL K  SPCN LVFGL  ++L+W ALNH G+T+F++E+  
Sbjct: 82  ASKSNDSYHMTYSDLKPISDVLRKCSSPCNLLVFGLTPETLLWKALNHNGKTVFIDENRY 141

Query: 131 WIEQIRRRFPMLESYHVAYDSKVKEADNLMEVGR---GSECTAIGDPRYSMCGLALKGLP 187
           +   I  + P +++Y V Y +K  E   L+   +    +EC  + +  +S C L +  LP
Sbjct: 142 YAAYIEEKHPEIDAYDVQYTTKRSEMKELIASAKEHVANECKPVQNLLFSDCKLGINDLP 201

Query: 188 SEVYETRWDVIMVDAPTGYYEEAPGRMSAIYTAGMLARNRDKGGD--TDVFVHDVNRVVE 245
           + VYE  WDVI+VD P G + EAPGRMSAI+TAG+LAR++ KGG+  T VF+HD +  VE
Sbjct: 202 NHVYEVDWDVILVDGPRGDWPEAPGRMSAIFTAGVLARSK-KGGNPKTHVFLHDFSGEVE 260

Query: 246 DKFSKAFLCDKYMNKQEGRLRHFTI 270
                 FLC + + +    + H+ +
Sbjct: 261 QVCGNEFLCKENLLEASESMGHYVL 285