Miyakogusa Predicted Gene

Lj0g3v0073129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073129.1 Non Characterized Hit- tr|D8T650|D8T650_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.88,2e-17,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL;
BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carote,CUFF.3638.1
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110195.1 | retinal pigment epithelial membrane protein | ...   233   6e-62
Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |...    67   5e-12
Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC | chr8:13...    67   7e-12
Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |...    66   8e-12
Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |...    66   1e-11

>Medtr3g110195.1 | retinal pigment epithelial membrane protein | HC
           | chr3:51201204-51196407 | 20130731
          Length = 586

 Score =  233 bits (593), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 105/142 (73%), Positives = 123/142 (86%)

Query: 1   MPRYGNANSIKWFEVESNCTFHIINSFEDGHEVVVRGCRALDTIIPGPGPNSKEYEWFSR 60
           MPRYGNANSIKWFEVE NCTFHIINSFEDG EVVVRGCR+LD++IP P P+SKE+EW SR
Sbjct: 355 MPRYGNANSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSKEFEWLSR 414

Query: 61  CYEWRLNMQTGEVKEEDLCGTETVYMDFPMINEKFIGIKNKYAYTQVVDHAASTTRDRPK 120
           C+EWRLNM TGEVKE+DLCG + VYMDFPMINE F+G+K++YAYTQVVD  +STT+D PK
Sbjct: 415 CHEWRLNMLTGEVKEKDLCGNKLVYMDFPMINENFVGVKHRYAYTQVVDPTSSTTQDVPK 474

Query: 121 YGGLAKLYFEESRAKVPMRDKE 142
           Y G+AKLY EE+ A+  M  +E
Sbjct: 475 YRGIAKLYLEETCAEFSMSKRE 496


>Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
           | chr8:13873459-13869022 | 20130731
          Length = 575

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 9/139 (6%)

Query: 1   MPRYGNANS-IKWFEVESNCTFHIINSFEDGHEVVVRGCRA--LDTIIPGPGPNSKEYEW 57
           +PRY   +  I+WFE+ +   FH  N++E+  EVV+  CR   LD  +       K   +
Sbjct: 350 LPRYAKDDKLIRWFELPNCFIFHNANAWEEEDEVVMITCRLKNLDLDMVSEDVKDKLESF 409

Query: 58  FSRCYEWRLNMQTGEVKEEDLCGTETVYMDFPMINEKFIGIKNKYAYTQVVDHAASTTRD 117
            +  YE R NM+TG+  ++ L       +DFP +NE++ G K KY Y  ++D   S T  
Sbjct: 410 SNELYEMRFNMKTGKASQKKLSAFS---IDFPRVNERYTGRKQKYVYGTILD---SITTG 463

Query: 118 RPKYGGLAKLYFEESRAKV 136
             K+   AK  F +++ +V
Sbjct: 464 IVKFDLSAKPDFGKTKLEV 482


>Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC |
           chr8:13903093-13896651 | 20130731
          Length = 540

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 10/120 (8%)

Query: 1   MPRYG-NANSIKWFEVESNCTFHIINSFEDGHEVVVRGCRA----LDTIIPGPGPNSKEY 55
           +PRY  +   I+WFE+ +   FH  N++E+  E+V+  CR     LD +  G     K  
Sbjct: 313 LPRYAKDEKHIRWFELPNCFIFHNANAWEEEDEIVLITCRLENPNLDMV--GGAVKEKLD 370

Query: 56  EWFSRCYEWRLNMQTGEVKEEDLCGTETVYMDFPMINEKFIGIKNKYAYTQVVDHAASTT 115
            + +  YE R NM+TGE  ++ L  +    +DFP +NE + G K +Y Y   +D  A  T
Sbjct: 371 NFANELYEMRFNMKTGEASQKKLSASA---VDFPRVNESYTGRKQRYVYGTELDSIAKVT 427


>Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
           | chr8:13854442-13849769 | 20130731
          Length = 575

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 1   MPRYGNANS-IKWFEVESNCTFHIINSFEDGHEVVVRGCRA--LDTIIPGPGPNSKEYEW 57
           +PRY   +  I+WFE+ +   FH  N++E+  +VV+  CR   LD  +       K   +
Sbjct: 350 LPRYAKDDKLIRWFELPNCFIFHNANAWEEEDQVVLITCRLNNLDLDMVSEDVKDKLESF 409

Query: 58  FSRCYEWRLNMQTGEVKEEDLCGTETVYMDFPMINEKFIGIKNKYAYTQVVD 109
            ++ YE R NM+TG+  ++ L       +DFP +NE++ G K KY Y  ++D
Sbjct: 410 STQLYEMRFNMKTGKASQKKLSAFS---VDFPRVNERYTGRKQKYVYGTILD 458


>Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
           | chr8:13895762-13890670 | 20130731
          Length = 575

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 6/116 (5%)

Query: 1   MPRYGNANS-IKWFEVESNCTFHIINSFEDGHEVVVRGCRA--LDTIIPGPGPNSKEYEW 57
           +PRY   +  I+WFE+ +   FH  N++E+  EVV+  CR   LD  +       K   +
Sbjct: 350 LPRYAKDDKHIRWFELPNCFIFHNANAWEEEDEVVLITCRLKNLDLDMVAEDIKDKLKNF 409

Query: 58  FSRCYEWRLNMQTGEVKEEDLCGTETVYMDFPMINEKFIGIKNKYAYTQVVDHAAS 113
            +  YE R NM+TG+  ++ L    T  +DFP +NE++ G K KY Y  ++   A+
Sbjct: 410 SNELYEMRFNMKTGKAAQKKLS---TYSVDFPRVNERYTGRKQKYVYGTILGSNAT 462