Miyakogusa Predicted Gene

Lj0g3v0073009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073009.1 Non Characterized Hit- tr|H3DDP9|H3DDP9_TETNG
Uncharacterized protein OS=Tetraodon nigroviridis
GN=L,42.86,4e-19,GTP-BINDING PROTEIN-RELATED,NULL;
seg,NULL,CUFF.3647.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase super...   272   2e-73

>Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:17882585-17887926 |
           20130731
          Length = 589

 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/215 (64%), Positives = 153/215 (71%), Gaps = 4/215 (1%)

Query: 1   MIACGVLPIDRMTEHREAVQVVADRVPRHVIEGVYKITLPKPKSYESQSLPPLASELLRV 60
           MI CGVLPIDRMT+HRE VQVVA+RVPRHVIE +Y I+LPKPKSYESQS PPLASELLR 
Sbjct: 375 MITCGVLPIDRMTQHRECVQVVANRVPRHVIEEIYNISLPKPKSYESQSRPPLASELLRT 434

Query: 61  YCASRGYVASSGLPDETKAARQILKDYIDGKVPHYEMPPGVSSEEQALEDPTGXXXXXXX 120
           YCASRG   SSGLPDET+A+RQILKDYIDGK+PHYEMPPG+S++E A ED          
Sbjct: 435 YCASRGQTTSSGLPDETRASRQILKDYIDGKLPHYEMPPGLSTQELASEDSNEHDQVNPH 494

Query: 121 XXXXXGIEDSLDGESEQAPNLEHVLDDLKSFDLANGIASQKVT-XXXXXXXXXXXXXXXX 179
                 IEDS   E+E AP LEHVLDDL SFD+ANG+AS KV                  
Sbjct: 495 VSDASDIEDSSVVETELAPKLEHVLDDLSSFDMANGLASNKVAPKKTKESQKHHRKPPRT 554

Query: 180 XXXSWRAGN---DGTDGTPIARFFQKPANTGPVKV 211
              SWRAGN   D TDG PIARF QKP N+GP+KV
Sbjct: 555 KNRSWRAGNAGKDDTDGMPIARFHQKPVNSGPLKV 589