Miyakogusa Predicted Gene

Lj0g3v0071399.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0071399.2 tr|G7K757|G7K757_MEDTR FAR1-related protein
OS=Medicago truncatula GN=MTR_5g072190 PE=4 SV=1,63.04,0,plant mutator
transposase zinc finger,Zinc finger, PMZ-type; ZF_SWIM,Zinc finger,
SWIM-type; coiled-,CUFF.3502.2
         (608 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g012160.1 | FAR1-related sequence protein | HC | chr3:3268...   150   3e-36
Medtr3g450850.1 | FAR1 DNA-binding domain protein | LC | chr3:17...   149   7e-36
Medtr4g071400.1 | hypothetical protein | HC | chr4:26956345-2695...   128   2e-29
Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC | chr4:12...   102   2e-21
Medtr3g095940.1 | hypothetical protein | LC | chr3:43843817-4383...    83   9e-16
Medtr5g083630.1 | hypothetical protein | LC | chr5:36081426-3608...    80   5e-15
Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC | chr6:17...    80   6e-15
Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-76698...    59   1e-08
Medtr2g105460.1 | hypothetical protein | LC | chr2:45475519-4547...    53   1e-06
Medtr8g447350.1 | hypothetical protein | HC | chr8:18615160-1861...    50   5e-06

>Medtr3g012160.1 | FAR1-related sequence protein | HC |
          chr3:3268880-3269161 | 20130731
          Length = 93

 Score =  150 bits (379), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 83/93 (89%)

Query: 2  IRVLELEKGIDPGNLPFLEKDIRNFMQSQSGIGKENDVADVLKLCKILSDRDDAFKYDFT 61
          +RVLELEK I  GNLPFL+KDIRNF+QS+S IGKEND +DVLKLCK L D DDAFKY+FT
Sbjct: 1  MRVLELEKKIVTGNLPFLDKDIRNFIQSRSCIGKENDASDVLKLCKNLKDIDDAFKYEFT 60

Query: 62 IDESNRLEHVIWAFGDSIRAYEAFRDVVVFYTT 94
          IDESN+LEH++WAFGDSIRAYE+F DVVVF TT
Sbjct: 61 IDESNKLEHIMWAFGDSIRAYESFGDVVVFDTT 93


>Medtr3g450850.1 | FAR1 DNA-binding domain protein | LC |
           chr3:17615614-17616669 | 20130731
          Length = 351

 Score =  149 bits (376), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 67/93 (72%), Positives = 84/93 (90%)

Query: 1   MIRVLELEKGIDPGNLPFLEKDIRNFMQSQSGIGKENDVADVLKLCKILSDRDDAFKYDF 60
           +IRVLELEK ++ GNLPFL+KDIRNF+QSQSG GKE D ++VLKLCK L D D+AF+Y+F
Sbjct: 194 IIRVLELEKNVNAGNLPFLDKDIRNFIQSQSGFGKEFDASNVLKLCKSLKDADNAFEYEF 253

Query: 61  TIDESNRLEHVIWAFGDSIRAYEAFRDVVVFYT 93
           +IDE+N+LEH+IW+FGDS+RAYEAF DV+VFYT
Sbjct: 254 SIDENNKLEHIIWSFGDSVRAYEAFGDVIVFYT 286


>Medtr4g071400.1 | hypothetical protein | HC |
           chr4:26956345-26956710 | 20130731
          Length = 121

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 79/103 (76%)

Query: 398 VMKNYFCIPRKYLPLRWRRESSLIPKSMHIINSSDRSTIEFMSLVQCLEAESFKTKDRIE 457
           ++KNY  +P KYLP RWRRESSLIPKS H+IN +D S+ +F SL++CLE ES KT +R +
Sbjct: 1   MLKNYLVLPSKYLPFRWRRESSLIPKSSHVINCNDVSSAKFQSLIRCLEVESLKTSEREQ 60

Query: 458 VAAKELQKVIQVLKDMPESQEQIHALEQVVPNNNECDVQNPII 500
           VA +EL+ +I  +K MPE+QE +  LE  V NN++CDV+NP++
Sbjct: 61  VATRELENIIIKIKGMPETQEHVIDLEADVSNNDDCDVENPVV 103


>Medtr4g035820.1 | FAR1 DNA-binding domain protein | LC |
           chr4:12632859-12628018 | 20130731
          Length = 668

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 22/163 (13%)

Query: 1   MIRVLELEKGIDPGNLPFLEKDIRNFMQSQSGIGKENDVADVLKLCKILSDRDDAFKYDF 60
           ++RV+ELEK +  G LP+ EKDIRN     +   + +DV D+LK C+        F+Y +
Sbjct: 216 IMRVIELEKNVKHGYLPYTEKDIRNLYVKANKKIEGSDVMDLLKYCEGAKKTSSKFQYAY 275

Query: 61  TIDESNRLEHVIWAFGDSIRAYEAFRDVVVFYTTYRINRYDMPLGLLVG-------IDNH 113
           T+DE  RLEH+ W+       Y+ + DVVVF TTY++N Y+MP G+  G       + +H
Sbjct: 276 TLDEERRLEHIFWSSASCFDWYQKYGDVVVFDTTYKVNSYEMPFGIFCGNYWALAYLRDH 335

Query: 114 GNSIFFGCVLL--RDEKTPAFTWAIKAFLNFVKGKCPQTILTD 154
               FFG +    R E   AF   IK F+N        T LTD
Sbjct: 336 ----FFGGMTTTGRSESINAF---IKRFIN------SHTSLTD 365



 Score = 97.1 bits (240), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 63/96 (65%)

Query: 242 FWALAYLKDFFFAGMTTTGRSESINSYIKRFLNVKTSLIDFVNQVGVAVNIRNQAGEEAR 301
           +WALAYL+D FF GMTTTGRSESIN++IKRF+N  TSL DF  QV VA++   Q  +   
Sbjct: 326 YWALAYLRDHFFGGMTTTGRSESINAFIKRFINSHTSLTDFAKQVDVAIDDIKQKEDHDI 385

Query: 302 MRQKYLNPQFKTGFPIEEHAASILTPYAFKLLQHEI 337
           M +K      K   P++E A  +LT ++F+  Q E+
Sbjct: 386 MLEKCKGSNMKLMSPLQEQAHCVLTRFSFQKFQEEL 421


>Medtr3g095940.1 | hypothetical protein | LC |
           chr3:43843817-43838164 | 20130731
          Length = 149

 Score = 82.8 bits (203), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 43/51 (84%)

Query: 310 QFKTGFPIEEHAASILTPYAFKLLQHEIELSTKYGATELSIGSYNVRFHTK 360
             +T FP EEHAAS+LTPYAFKLLQHEIELSTKY ATE+  GSY V++HTK
Sbjct: 93  HIRTCFPTEEHAASVLTPYAFKLLQHEIELSTKYAATEIDNGSYIVQYHTK 143


>Medtr5g083630.1 | hypothetical protein | LC |
          chr5:36081426-36082130 | 20130731
          Length = 112

 Score = 80.5 bits (197), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 46/58 (79%)

Query: 3  RVLELEKGIDPGNLPFLEKDIRNFMQSQSGIGKENDVADVLKLCKILSDRDDAFKYDF 60
          RVL LEKG+D  N PF +KDIRNF+QSQS IGKE D ++ LKLCK L D D+AF+++F
Sbjct: 19 RVLVLEKGVDAANFPFFDKDIRNFIQSQSAIGKEFDASNDLKLCKSLEDADNAFEHEF 76


>Medtr6g051425.1 | FAR1 DNA-binding domain protein | HC |
           chr6:17965556-17964534 | 20130731
          Length = 340

 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 16  LPFLEKDIRNFMQSQ-SGIGKENDVADVLKLCKILSDRDDAFKYDFTIDESNRLEHVIWA 74
           L    KD+ NF+ ++ S + K  D   ++   +    +D  F Y   +D+ +RL +V W 
Sbjct: 172 LGMTMKDVHNFVYTEKSKLIKGGDAQSLINHLQNRQAQDAMFYYSVQLDQESRLTNVFWR 231

Query: 75  FGDSIRAYEAFRDVVVFYTTYRINRYDMPLGLLVGIDNHGNSIFFGCVLLRDEKTPAFTW 134
            G S   Y+ F DVVVF TTYR N YD+     VG+ +H  ++ FGCVLL DE +  F +
Sbjct: 232 DGKSKVDYDCFGDVVVFDTTYRTNTYDLICAPFVGVIHHLQNVMFGCVLLSDETSCVFGF 291


>Medtr6g022070.1 | hypothetical protein | LC | chr6:7671087-7669835
           | 20130731
          Length = 337

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 159 MKEAISMVLPNTKHAFCIWHIVGKLSGWFSIPLGSRYNDFKTEFYKVYHSE-SADDFEQG 217
           M+ AI  V PN  H  C  H+    +     P       F  +F +    +   ++FE  
Sbjct: 1   MRNAIRTVFPNDHHHLCAKHLARNAASNIKTP------QFVPKFKQCMFGDFDIEEFESR 54

Query: 218 WKLMIAQFDISMDRHIDLLYSHRQFWALAYLKDFFFAGMTTTGRSESINSYIKRFLNVKT 277
           W+    +F +  ++ I  LY  R   + A++   F+AG  TT R E ++S   ++++V +
Sbjct: 55  WENFFGEFGLENNKWIHELYEKRNQCSTAHIWGTFYAGFRTTSRWEGLHSEFGKYVSVLS 114

Query: 278 SLIDFVNQ 285
           +LIDF+N 
Sbjct: 115 NLIDFLNH 122


>Medtr2g105460.1 | hypothetical protein | LC |
           chr2:45475519-45478266 | 20130731
          Length = 595

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 58  YDFTIDESNRLEHVIWAFGDSIRAYEAFRDVVVFYTTYRINRYDMPLGLLVGIDNH--GN 115
           Y  T  ES  +E + WA   S++ +  F  V+V  +TY+ N Y MP+  +VG+ ++    
Sbjct: 161 YSRTQSESTTIEDIFWAHPTSVKLFNNFPTVLVMDSTYKTNMYKMPMFEVVGVTSNDLTY 220

Query: 116 SIFFGCVLLRDEKTPAFTWAIKAFLNFVKGK 146
           S++FG V    EK   F W +K     +  K
Sbjct: 221 SVWFGFVT--HEKEENFVWVLKMLRKLLTSK 249


>Medtr8g447350.1 | hypothetical protein | HC |
           chr8:18615160-18613818 | 20130731
          Length = 184

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 22/110 (20%)

Query: 302 MRQKYLNPQFKTGFPIEEHAASILTPYAFKLLQHEIELSTKYGATELSIGSYNVRFHTKV 361
           M +K      K   P++E A S+LT ++F+  Q E E                 +++ +V
Sbjct: 1   MLEKCKGSNMKLMSPLQEQAHSVLTRFSFQKFQEEFE-----------------KYYKEV 43

Query: 362 DGGRLVIWVEEEESITCSCKEFEFSGILCRHAIRVLVMKNYFCIPRKYLP 411
           +  + V++ + E   TCS K FEF GILCRH + + + +    IP  YLP
Sbjct: 44  NSRKHVVFWDGEVD-TCSSKLFEFWGILCRHILSIFLQE----IPSNYLP 88