Miyakogusa Predicted Gene
- Lj0g3v0071389.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0071389.1 tr|A9T8E9|A9T8E9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_192620,26.12,2e-18,seg,NULL; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; no
description,Tetratricope,CUFF.3494.1
(314 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 436 e-122
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 198 4e-51
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 197 1e-50
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 2e-50
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 3e-50
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 195 4e-50
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 195 6e-50
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 192 4e-49
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 191 8e-49
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 188 6e-48
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 186 2e-47
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 185 5e-47
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 184 9e-47
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 184 1e-46
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 182 3e-46
Medtr1g059720.1 | organelle transcript processing protein, putat... 182 4e-46
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 181 5e-46
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 180 2e-45
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 180 2e-45
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 180 2e-45
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 180 2e-45
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 180 2e-45
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 180 2e-45
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 180 2e-45
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 179 2e-45
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 179 2e-45
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 179 3e-45
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 178 6e-45
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 178 6e-45
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 177 1e-44
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 175 5e-44
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 175 5e-44
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 175 6e-44
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 175 6e-44
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 174 7e-44
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 174 1e-43
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 174 1e-43
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 172 3e-43
Medtr3g052720.1 | organelle transcript processing protein, putat... 171 6e-43
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 171 8e-43
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 171 9e-43
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 171 1e-42
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 170 1e-42
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 170 2e-42
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 170 2e-42
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 170 2e-42
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 169 2e-42
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 169 2e-42
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 2e-42
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 169 3e-42
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 3e-42
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 3e-42
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 169 3e-42
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 4e-42
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 4e-42
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 169 4e-42
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 169 5e-42
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 168 5e-42
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 168 6e-42
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 168 8e-42
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 168 8e-42
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 167 9e-42
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 167 9e-42
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 167 1e-41
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 1e-41
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 167 1e-41
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 167 1e-41
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 1e-41
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 2e-41
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 167 2e-41
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 166 2e-41
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 166 2e-41
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 166 2e-41
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 166 2e-41
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 166 3e-41
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 166 3e-41
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 165 4e-41
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 165 4e-41
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 5e-41
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 5e-41
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 165 5e-41
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 165 6e-41
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 165 6e-41
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 6e-41
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 164 7e-41
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 7e-41
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 164 8e-41
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 8e-41
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 164 1e-40
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 164 1e-40
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 1e-40
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 164 1e-40
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 163 2e-40
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 163 2e-40
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 163 2e-40
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 163 2e-40
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 163 2e-40
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 163 2e-40
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 162 3e-40
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 162 3e-40
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 162 3e-40
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 162 4e-40
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 162 4e-40
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 162 4e-40
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 162 4e-40
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 162 4e-40
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 162 5e-40
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 162 5e-40
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 162 5e-40
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 161 6e-40
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 161 6e-40
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 161 6e-40
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 161 9e-40
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 161 1e-39
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 160 1e-39
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 160 1e-39
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 160 1e-39
Medtr5g006420.1 | organelle transcript processing protein, putat... 160 2e-39
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 160 2e-39
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 160 2e-39
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 160 2e-39
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 160 2e-39
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 159 3e-39
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 159 3e-39
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 159 4e-39
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 159 4e-39
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 159 4e-39
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 158 5e-39
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 158 6e-39
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 158 6e-39
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 158 7e-39
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 158 8e-39
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 1e-38
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 157 2e-38
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 156 2e-38
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 2e-38
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 2e-38
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 156 3e-38
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 156 3e-38
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 3e-38
Medtr4g113830.1 | organelle transcript processing protein, putat... 155 4e-38
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 155 4e-38
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 155 5e-38
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 155 6e-38
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 155 7e-38
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 155 7e-38
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 154 7e-38
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 154 9e-38
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 154 9e-38
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 154 1e-37
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 154 1e-37
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 154 1e-37
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 154 1e-37
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 153 2e-37
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 153 2e-37
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 153 2e-37
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 153 2e-37
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 152 3e-37
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 152 3e-37
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 3e-37
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 152 3e-37
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 3e-37
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 152 4e-37
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 4e-37
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 4e-37
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 152 4e-37
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 152 5e-37
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 151 6e-37
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 151 7e-37
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 151 7e-37
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 151 7e-37
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 151 8e-37
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 151 9e-37
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 151 1e-36
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 151 1e-36
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 151 1e-36
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 150 1e-36
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 150 1e-36
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 150 1e-36
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 150 1e-36
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 150 2e-36
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 150 2e-36
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 150 2e-36
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 150 2e-36
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 150 2e-36
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 149 2e-36
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 149 3e-36
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 149 4e-36
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 149 4e-36
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 148 5e-36
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 148 7e-36
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 147 1e-35
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 147 1e-35
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 147 2e-35
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 147 2e-35
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 147 2e-35
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 147 2e-35
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 146 2e-35
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 146 2e-35
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 146 3e-35
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 144 8e-35
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 144 8e-35
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 144 1e-34
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 144 2e-34
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 143 3e-34
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 142 3e-34
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 142 5e-34
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 142 5e-34
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 141 7e-34
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 141 7e-34
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 141 8e-34
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 141 8e-34
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 141 9e-34
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 141 9e-34
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 141 1e-33
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 140 1e-33
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 1e-33
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 140 2e-33
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 140 2e-33
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 139 3e-33
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 3e-33
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 138 5e-33
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 138 6e-33
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 137 9e-33
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 137 1e-32
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 137 1e-32
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 1e-32
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 137 2e-32
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 136 2e-32
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 136 3e-32
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 5e-32
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 5e-32
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 135 6e-32
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 134 8e-32
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 134 8e-32
Medtr3g117150.1 | organelle transcript processing protein, putat... 134 8e-32
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 134 8e-32
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 134 1e-31
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 134 2e-31
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 133 3e-31
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 133 3e-31
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 133 3e-31
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 132 6e-31
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 132 6e-31
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 131 7e-31
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 8e-31
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 131 9e-31
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 131 1e-30
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 130 2e-30
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 129 4e-30
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 128 8e-30
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 125 7e-29
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 124 9e-29
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 123 2e-28
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 3e-28
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 6e-28
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 121 9e-28
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 120 1e-27
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 3e-27
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 119 4e-27
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 119 4e-27
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 117 1e-26
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 109 4e-24
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 109 4e-24
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 107 1e-23
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 107 1e-23
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 107 1e-23
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 107 1e-23
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 107 2e-23
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 106 3e-23
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 105 5e-23
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 105 6e-23
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 105 8e-23
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 102 4e-22
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 102 4e-22
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 102 6e-22
Medtr6g460480.1 | organelle transcript processing protein, putat... 98 1e-20
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 98 1e-20
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 97 2e-20
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 96 6e-20
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 89 5e-18
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 89 5e-18
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 88 1e-17
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 77 2e-14
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 75 1e-13
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 73 3e-13
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 72 7e-13
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 72 9e-13
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 7e-12
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 8e-12
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 66 4e-11
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 66 4e-11
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 66 5e-11
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 66 5e-11
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 65 7e-11
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 65 7e-11
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 64 2e-10
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 63 3e-10
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 63 3e-10
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 5e-10
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 63 5e-10
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 5e-10
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 62 6e-10
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-09
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 60 2e-09
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 2e-09
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 60 3e-09
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 4e-09
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 59 4e-09
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 59 4e-09
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 59 4e-09
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 59 5e-09
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 59 6e-09
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 6e-09
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 59 7e-09
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 59 8e-09
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 9e-09
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 58 1e-08
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 58 1e-08
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 58 1e-08
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 58 1e-08
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 2e-08
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 57 3e-08
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 57 3e-08
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 57 3e-08
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 57 3e-08
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-08
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-08
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 57 3e-08
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 57 3e-08
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 56 4e-08
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 56 4e-08
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 56 4e-08
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 56 4e-08
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 4e-08
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 5e-08
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 56 5e-08
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 56 5e-08
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 6e-08
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 6e-08
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 6e-08
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 55 7e-08
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr1g085280.1 | ribosomal protein L15 | HC | chr1:38067122-380... 55 8e-08
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 55 8e-08
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 55 8e-08
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 9e-08
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 9e-08
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 9e-08
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 55 1e-07
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 1e-07
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 1e-07
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 55 1e-07
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-07
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 3e-07
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr2g096880.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 53 3e-07
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 53 4e-07
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 53 4e-07
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 52 5e-07
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 52 7e-07
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 52 7e-07
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 9e-07
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 1e-06
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 52 1e-06
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 51 1e-06
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 51 1e-06
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 51 1e-06
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-06
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 51 2e-06
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-06
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 50 2e-06
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 50 2e-06
Medtr6g065150.1 | PPR domain protein | LC | chr6:24123555-241231... 50 2e-06
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 50 2e-06
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 50 3e-06
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 50 3e-06
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 50 3e-06
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 50 4e-06
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 49 5e-06
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 49 5e-06
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 6e-06
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 49 7e-06
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 49 7e-06
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/316 (68%), Positives = 249/316 (78%), Gaps = 3/316 (0%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAA--QNDGSFKAIALYRKMXXX 58
+I+LY+ N+ TA+ LF+ MDVPPNESTFNPIIAAL+ QN+ SFKAI+ YR+M
Sbjct: 124 IIALYSRV-QNITTAVNLFNEMDVPPNESTFNPIIAALSLSNQNNASFKAISFYRRMTGL 182
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
V++AALNLIKEIHGY +RNDID HPQL SGLIEAYGRCGCL++S
Sbjct: 183 KLKPGLITLLALVRASVSIAALNLIKEIHGYAMRNDIDSHPQLSSGLIEAYGRCGCLMDS 242
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF MR DKDVV WS+LISA ALHGEAK ALE F+EME++GVKPDGITFL VLKACS
Sbjct: 243 RTVFKNMRGCDKDVVVWSNLISACALHGEAKEALEFFQEMEVSGVKPDGITFLAVLKACS 302
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
HAG D+ALC+F +M RDYGVE +S+HYSCLVDVLSRAGRL+EAYEVI+GMPVKVTAKAW
Sbjct: 303 HAGLDDEALCFFMKMHRDYGVEPNSEHYSCLVDVLSRAGRLYEAYEVIKGMPVKVTAKAW 362
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
GALLGAC N+GELGLAEIAG+A AEVEP+NAANYVLLAK+YASVG
Sbjct: 363 GALLGACTNYGELGLAEIAGKALAEVEPDNAANYVLLAKIYASVGRREEADRMIREMKEK 422
Query: 299 GVKSTTGSSWVVYSES 314
GVK+T+G+SWVVYSES
Sbjct: 423 GVKTTSGTSWVVYSES 438
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 160/299 (53%), Gaps = 6/299 (2%)
Query: 14 TALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
TAL++F ++ N T+ IIA+ QN +A+ L+R M
Sbjct: 183 TALDVFKKFKAGELELNVVTWTSIIAS-CVQNGKDMEALELFRDMQADGVEPNAVTIPSL 241
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C N++AL KEIH + +R I +GS LI+ Y CG + S N F +M +
Sbjct: 242 IPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPF--R 299
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
++V+W+S++S YA+HG+AK +E F M +G KPD ITF VL AC+ G ++ YF
Sbjct: 300 NLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYF 359
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M ++Y V+ +HY+C+V +LSR G+L EAY +I+ MP + A WGALL +CR
Sbjct: 360 NSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHHN 419
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L L EIA +EP+N NY+LL+ +YAS G G++ G SW+
Sbjct: 420 LSLGEIAAEKLFVLEPDNPGNYILLSNIYASKGMWDEENRVRDMMKSKGLQKNPGCSWI 478
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 47/272 (17%)
Query: 11 NLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXX 66
N+ A E+F M V PN ++N +IA N G + +A+ L+ +M
Sbjct: 44 NVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFG--NVGLYDEAVRLFHEMVSEGFLPDGST 101
Query: 67 XXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGC------------ 114
N+ + + K++HGY I+ ++ + S L++ YGRCGC
Sbjct: 102 VSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEID 161
Query: 115 ------------------LVNSC-NVFSKMR--DMDKDVVAWSSLISAYALHGEAKAALE 153
LV++ +VF K + +++ +VV W+S+I++ +G+ ALE
Sbjct: 162 QTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALE 221
Query: 154 TFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
F++M+ GV+P+ +T ++ AC S + C+ R G+ S L+
Sbjct: 222 LFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLR----KGIFDDVYVGSALI 277
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
D+ + GR+ + MP + +W +++
Sbjct: 278 DMYANCGRIRLSQNCFDEMPFR-NLVSWNSIM 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
S L+ Y +C + ++ +F M D+DV+ WS++I+ Y+ G A E F EM G
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGM--CDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEG 59
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V+P+ +++ G++ + G D+A+ F M + G SC VL G L +
Sbjct: 60 VEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSE-GFLPDGSTVSC---VLPGVGNLEDV 115
Query: 223 Y--EVIRGMPVKVTAKAWGALLGACRN-FGELGLAEIAGRASAEVE 265
+ + G +K+ ++ ++ A + +G G A R E++
Sbjct: 116 LMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEID 161
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 164/306 (53%), Gaps = 5/306 (1%)
Query: 4 LYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXX 63
+YA S L A + F M V + +N +I + + QN AI L+R+M
Sbjct: 524 MYAKS-GRLDLAYQFFRRMPVK-DSVCWNLMIVSFS-QNGKPELAIDLFRQMGTSGTKFD 580
Query: 64 XXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFS 123
C N AL KE+H + +RN + S LI+ Y +CG L + +VF
Sbjct: 581 SVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFD 640
Query: 124 KMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 183
M K+ V+W+S+I+AY HG + L+ F EM AG++PD +TFL ++ AC HAG
Sbjct: 641 MMDW--KNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLV 698
Query: 184 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
D+ + YF M +YG+ A +H++C+VD+ RAGRLHEA++ I+ MP A WG+LLG
Sbjct: 699 DEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758
Query: 244 ACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKST 303
ACR G + LA++A + E++P N+ YVLL+ ++A G GV+
Sbjct: 759 ACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKI 818
Query: 304 TGSSWV 309
G SW+
Sbjct: 819 PGYSWI 824
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 18/261 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES-TFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+I++Y+ NL A ++F +M P ++ T+N +IA QN + +A+AL++ M
Sbjct: 319 IITMYSKC-GNLFDARKIFDIM--PQTDTVTWNGLIAGYV-QNGFTDEAVALFKAMVTSG 374
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
+ +L KE+H Y +R+ + L S L++ Y + G + +C
Sbjct: 375 VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMAC 434
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC-- 177
F + + DV +++IS Y L+G AL F+ + G+ P+ +T VL AC
Sbjct: 435 KTFQQ--NTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAA 492
Query: 178 -SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
+ + C + G+E S + + +++GRL AY+ R MPVK +
Sbjct: 493 LASLKLGKELHCDILKK----GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSV- 547
Query: 237 AWGALLGACRNFGELGLAEIA 257
W ++ + F + G E+A
Sbjct: 548 CWNLMIVS---FSQNGKPELA 565
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++HG IR+ + P + + +I Y +CG L ++ +F M D V W+ LI+ Y
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQ--TDTVTWNGLIAGYVQ 356
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEA 201
+G A+ FK M +GVK D ITF L + +G + + Y R +GV
Sbjct: 357 NGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR----HGVPF 412
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIR 227
S LVD+ + G + A + +
Sbjct: 413 DVYLKSALVDIYFKGGDVEMACKTFQ 438
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+GS LI+ Y G + ++ +F ++ +D + W+ +++ Y +G+ +AL TF+EM
Sbjct: 214 IGSSLIKLYTDNGYIHDAKYLFDELPV--RDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
+ VKP+ ++F+ +L C+ G + + R G E+ + ++ + S+ G L
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFESDPTVANTIITMYSKCGNLF 330
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRN 247
+A ++ MP T G + G +N
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQN 357
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++SLY L L F M+ N +N +I + QN+ F A+ ++ +M
Sbjct: 543 LVSLYVQCGKILLAKL-FFDNME-EKNLVCWNTMINGFS-QNEFPFDALDMFHQMLSSKI 599
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C V+AL L KE+H + +++ + H + LI+ Y +CGC+ S N
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQN 659
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F ++ K V W+ LI+ Y +HG + A+E FK M+ AG +PD +TF+ +L AC+HA
Sbjct: 660 IFDRVHL--KGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHA 717
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + L Y +MQ +G++ +HY+C+VD+L RAGRL+EA E++ +P K ++ W +
Sbjct: 718 GLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSS 777
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL +CRN+ +L + E E+ P+ A NYVL++ YA +G G+
Sbjct: 778 LLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGL 837
Query: 301 KSTTGSSWV 309
+ G SW+
Sbjct: 838 QKDAGCSWI 846
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
S++N +I QN KA+ LY M C + +L+ KEIHG
Sbjct: 468 SSWNALIGG-HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHG 526
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+RN + + L+ Y +CG ++ + F M + K++V W+++I+ ++ +
Sbjct: 527 SMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEE--KNLVCWNTMINGFSQNEFP 584
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
AL+ F +M + + PD I+ +G L ACS
Sbjct: 585 FDALDMFHQMLSSKIWPDEISIIGALGACSQV 616
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L HG ++ + ++ S L++ Y +CG L + +F +K+V+
Sbjct: 309 CARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN---EKNVI 365
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTR 192
+W+S+I Y+ + + A E ++M+M VK + +T L VL C F +
Sbjct: 366 SWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEE-------IQFLK 418
Query: 193 MQRDYG-------VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ +G +++ + V ++ G LH A V GM K+ + +W AL+G
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVS-SWNALIGG 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 83 IKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+KEIHGY +R+ I + + + Y +CG L + VF M K V +W++LI
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMES--KMVSSWNALIGG 476
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+ +G + AL+ + M +G++PD T +L AC+
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACA 513
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CV V + L + +HG+ ++ + +G+ LI YG+ G + ++ VF KM +++V
Sbjct: 206 CVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP--QRNLV 263
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA--GVKPDGITFLGVLKACSHAGFADDALCYFT 191
+W+S++ A +G + + FK + G+ PD T + V+ C+ G + F
Sbjct: 264 SWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFH 322
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ G+ S L+D+ S+ G L EA + V +W +++G
Sbjct: 323 GLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVI--SWNSMIGG 373
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 165/309 (53%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ Y D + A + F +M P + I A AQ+ +A+ ++ ++
Sbjct: 334 MITGYGQIGD-IAQARKFFDMM--PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++AAL L K+IHG ++ +G+ L+ Y +CG + + +
Sbjct: 391 SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F + + KDVV+W+++++ YA HG + AL F+ M+ AGVKPD IT +GVL ACSH
Sbjct: 451 TFEGIEE--KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D YF M +DYGV +S HY+C++D+L RAGRL EA ++IR MP + A +WGA
Sbjct: 509 GLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGA 568
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGA R G L E A ++EP+N+ YVLL+ +YA+ G GV
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGV 628
Query: 301 KSTTGSSWV 309
+ G SWV
Sbjct: 629 QKVPGYSWV 637
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 92 RNDIDPHPQLG----SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGE 147
RN D P+ + ++ Y R L ++ +F M + KDVV+W+SL+S YA +G
Sbjct: 100 RNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE--KDVVSWNSLLSGYAQNGY 157
Query: 148 AKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS 207
A E F M + + I++ G+L A H G ++A C + D+ + + ++
Sbjct: 158 VDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEA-CLLFESKSDWDLIS----WN 208
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
CL+ R +L +A + MPV+ A +W ++ G L A
Sbjct: 209 CLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISGYAQGGGLSQAR 255
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 164/309 (53%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+IS Y + D + A ELF +M + ++ IIA A Q K + + KM
Sbjct: 302 IISGYGQNGD-IAQARELFDMM-TQRDCVSWAAIIAGYA-QTGHYEKVMHMLVKMKRDGK 358
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +AAL L K++HG ++ D +G+ L+E Y +CG + + +
Sbjct: 359 SLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYD 418
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF +M+ KD+++W+++++ YA HG + AL F M+ AG KPD IT +GVL ACSH
Sbjct: 419 VFERMQL--KDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHT 476
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D YF M +DYG+ +S HY+C++D+L RAG L EA+ ++R MP + A WGA
Sbjct: 477 GLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGA 536
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGA R G L E A +EP NA YVLL+ +YA++G G+
Sbjct: 537 LLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGI 596
Query: 301 KSTTGSSWV 309
+ G SWV
Sbjct: 597 QKIPGYSWV 605
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 159/291 (54%), Gaps = 13/291 (4%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
V +E+T+N +I +N S +A+ ++RKM C L +
Sbjct: 276 VRADEATWNAVIGG-CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 334
Query: 84 KEIHGYGIRNDIDPHPQLG-----SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
KEIH Y R H ++G + L+ Y +CG L S NVF MR KDVVAW+++
Sbjct: 335 KEIHCYVFR-----HWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRR--KDVVAWNTM 387
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
I A A+HG K AL F +M ++ V+P+ +TF GVL CSH+ ++ + F M RD+
Sbjct: 388 IIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHL 447
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
VE ++HYSC+VD+ SRAGRL+EAY+ I+GMP++ TA AWGALL ACR + + LA+I+
Sbjct: 448 VEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISA 507
Query: 259 RASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ E+EP N NYV L + + G+ T G SW+
Sbjct: 508 KKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWL 558
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 15 ALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
A +LF ++P P+ +T + +I+AL S +AI +Y +
Sbjct: 31 ARQLFD--NIPQPDPTTCSTLISALTTHG-LSNEAIKIYSSLQERGIKPDMPVFLAAAKA 87
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +KE+H R + +G+ LI AYG+C C+ + VF + + +DVV
Sbjct: 88 CAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL--VVRDVV 145
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+W+SL S Y G + ++ F+EM +GVKP+ +T +L AC+
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAE 191
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
K + ++R+M C + L KEIHG+ +R+ + + + S L+
Sbjct: 162 KGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALV 221
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +C + + VF M +DVV+W+ +++AY + E + F +M GV+ D
Sbjct: 222 SLYAKCLSVREARMVFDLMPH--RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRAD 279
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQR 195
T+ V+ C G +++A+ F +MQ+
Sbjct: 280 EATWNAVIGGCMENGRSEEAVEMFRKMQK 308
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 156/286 (54%), Gaps = 3/286 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
V PN +++ +I+ A++ K++ L+R+M C +AALNL
Sbjct: 364 VRPNVISWSAVISGFASKGRLE-KSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLG 422
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+E+H Y IRN +D + +G+GL+ Y +CG + VF ++ +D+++W+SLI Y
Sbjct: 423 RELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKG--RDLISWNSLIGGYG 480
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+HG + A+ TF EM AG++PD ITF+ VL ACSHAG F RM ++ +E +
Sbjct: 481 MHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTV 540
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY+C+VD+L RAG L EA++++R MP++ WGALL +CR + + L E
Sbjct: 541 EHYACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIESRILA 600
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ E +++LL+ +YA G G K G SW+
Sbjct: 601 LKSEITGSFMLLSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWI 646
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 21 LMDVPPNES----TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
+ P ES +N II A + ++ A+ +Y +M C
Sbjct: 80 IFTTTPFESLSNLVWNSIIRANVSHGYYNY-AVKIYHQMMKFGFLPDGFTLPLIIKSCSK 138
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ ++ L K +H + + H + + L+ YG+ + ++C VF M + + V++W+
Sbjct: 139 IGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGM--VVRSVLSWN 196
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+L+S YA + + A FK ME+ G++P+ +T+ +L + + G D+ + F ++ R
Sbjct: 197 TLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELF-KVMRI 255
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
G+E S + + ++ V + + E I G +K
Sbjct: 256 KGIEISGEAVAVVLSVCADMDGVQRGKE-IHGFVIK 290
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L ++IH I L + LI Y R + + +F+ + W+S+
Sbjct: 38 TLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSI 97
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDY 197
I A HG A++ + +M G PDG T ++K+CS G LC +
Sbjct: 98 IRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSV--GLCKIVHCHVLET 155
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRNFGELGLAEI 256
G + + LV + + R+ +A +V GM V+ + +W L+ G NF +G +
Sbjct: 156 GFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVR-SVLSWNTLVSGYAFNFDYVGAFRV 214
Query: 257 AGRASAE-VEPENAANYVLLAKMYAS 281
R E +EP NYV + +S
Sbjct: 215 FKRMELEGLEP----NYVTWTSLLSS 236
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVP---PNESTFNPIIAALAAQNDGSF-KAIALYRKMX 56
++S YA + D + A +F M++ PN T+ ++++ A G F + + L++ M
Sbjct: 198 LVSGYAFNFDYVG-AFRVFKRMELEGLEPNYVTWTSLLSSHA--RCGLFDETMELFKVMR 254
Query: 57 XXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCG-CL 115
C ++ + KEIHG+ I+ + + + + LI YG+ L
Sbjct: 255 IKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDL 314
Query: 116 VNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG----VKPDGITFL 171
++ +FS +++ K +V+W++LIS+YA G A E F ++E + V+P+ I++
Sbjct: 315 GDAHKIFSDIKN--KSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWS 372
Query: 172 GVLKACSHAGFADDALCYFTRMQ 194
V+ + G + +L F +MQ
Sbjct: 373 AVISGFASKGRLEKSLELFRQMQ 395
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 156/296 (52%), Gaps = 12/296 (4%)
Query: 26 PNESTFNPIIAALAAQN------------DGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
P+ +T+N I+ A A + D S +++ L+R M
Sbjct: 316 PDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISA 375
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ A++ +H + +RN I + +G+ ++ Y +CGCL +C VF KM + D+D
Sbjct: 376 CSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSF 435
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
++++I +A+HG ALE +++M+ G+ PD TF+ + ACSH G ++ L F M
Sbjct: 436 CYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSM 495
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ +GVE +HY CL+D+L RAGRL EA E + MP+K A W +LLGA R G LG+
Sbjct: 496 KEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGV 555
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E+A E+EPE + NYVLL+ MYASVG GV G S V
Sbjct: 556 GEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLV 611
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 137/236 (58%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AA + KE+HGY R DP S L+ Y +CG + VF++M D+V
Sbjct: 307 CADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQM--PRPDLV 364
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+SLI YA +G+ AL+ F+ + +G KPD ITF+GVL AC+HAG D L YF +
Sbjct: 365 SWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSV 424
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ +G+ ++DHY+C++D+L+R+GR EA +I MP+K W +LLG CR G + L
Sbjct: 425 KEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIEL 484
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE A +A E+EPEN A Y+ L+ +YA+ G G+ G SW+
Sbjct: 485 AERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWI 540
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KEIHGY IR+ ++ + + L++ YG+CG L + +F +M DKD+V+W+++I
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM--ADKDIVSWTTMIHRCF 273
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVE 200
G K F+++ +GV+P+ TF GVL AC+ + Y TR+ G +
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV----GYD 329
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
S S LV V S+ G A V MP + +W +L+
Sbjct: 330 PFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+ L L K +H + ++ P + + LI Y +CG LV++ +F ++ KD+
Sbjct: 73 CLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEI--PQKDLC 130
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++IS YA G + A + F EM D ++ V+ G+ +AL F M
Sbjct: 131 SWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMM 186
Query: 194 QRD 196
Q +
Sbjct: 187 QEN 189
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 153/257 (59%), Gaps = 3/257 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
+E T+N +I + +A+ L+ +M C ++A+L+ +++
Sbjct: 299 DEGTWNAMIKVFERKG-LDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQV 357
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H +R++ D + S LI Y +CG LV + +F+ R + KDVV W+S+I+ Y+ HG
Sbjct: 358 HARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFN--RFLFKDVVMWNSMITGYSQHG 415
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ AL F +M +GV+PD +TF+GVL ACS++G + F M+ Y VE +HY
Sbjct: 416 LGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHY 475
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
+C+VD+L RAGR+ EA E++ MP++ A WGALLGACRN +L LAE+A A++EP
Sbjct: 476 ACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEP 535
Query: 267 ENAANYVLLAKMYASVG 283
+NA YVLL+ MYA+ G
Sbjct: 536 KNAGPYVLLSHMYATKG 552
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 133/233 (57%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+A L +H Y ++ ++ S L++ Y +CG L + +F + DKD++ W+
Sbjct: 430 LADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWT 489
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
++I AY HG + A+ F +M +G KP+ +TF VL ACSHAG D L F M +
Sbjct: 490 AIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKK 549
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
Y V S DHY+C+VD+L RAGRL++AY +IR MP+ WGALLGAC + L EI
Sbjct: 550 YQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIHENVELGEI 609
Query: 257 AGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A R + E+EPEN NYVLLAK+YA+VG G++ T +S V
Sbjct: 610 AARWTFELEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLV 662
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+ +I D A+ L R M C ++ +L K +H +
Sbjct: 283 TWTTLINGYVVNGDAR-SALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAW 341
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
IR +I+ + + LI+ Y +C S VF M+ K W++++S + + A+
Sbjct: 342 AIRQNIESEVVMETALIDMYAKCNEGNLSYKVF--MKTSKKRTAPWNAVLSGFVHNRLAR 399
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD-----DALCYFTRMQRDYGVEASSD 204
A++ FKEM + V+PD TF +L A +A AD + CY ++ G +
Sbjct: 400 NAVQLFKEMLLENVQPDSPTFNSLLPA--YAILADLKQAMNMHCYLVKL----GFLCKLE 453
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVK-VTAKAWGALLGACRNFGELGLAEIA 257
S LVD+ S+ G L A+++ +P+K W A++ A +G+ G E+A
Sbjct: 454 VASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDA---YGKHGYGEMA 504
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I L +N+ + A+ +Y +M C + + L +E+
Sbjct: 182 SWNTLINGLF-RNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRAL 240
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+ + + + L++ Y +CG + + + + M + KDVV W++LI+ Y ++G+A+
Sbjct: 241 TLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEE--KDVVTWTTLINGYVVNGDAR 298
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
+AL + M++ GVKP+ ++ +L AC C R +E+ + L
Sbjct: 299 SALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQ-NIESEVVMETAL 357
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+D+ ++ + +Y+V K TA W A+L
Sbjct: 358 IDMYAKCNEGNLSYKVFMKTSKKRTA-PWNAVL 389
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 154/279 (55%), Gaps = 4/279 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N ++AA A QN ++I+L R+M +VA L +EIHG+G
Sbjct: 217 WNSMLAAYA-QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFG 275
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
R+ + ++ + LI+ Y +CG + + +F ++R+ K VV+W+++I+ YA+HG A
Sbjct: 276 WRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLRE--KRVVSWNAIITGYAMHGLAVG 333
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
AL+ F +M +PD ITF+GVL ACS D+ + M RDYG+ + HY+C++
Sbjct: 334 ALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMI 392
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
D+L G+L EAY++IR M VK + WGALL +C+ G + LAE+A E+EP+++
Sbjct: 393 DLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSG 452
Query: 271 NYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
NYV+LA MYA G +K SW+
Sbjct: 453 NYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWI 491
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXX 58
++ LYA S ++L A LF D P ++ F N +I A N AI LY KM
Sbjct: 88 LVHLYAVS-NSLLNARNLF---DKIPKQNLFLWNVLIRGYA-WNGPHDNAIILYHKMLDY 142
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C ++A+ + IH Y I++ + +G+ LI+ Y +CGC++++
Sbjct: 143 GLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDA 202
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF K+ + +D V W+S+++AYA +G ++ +EM GV+P T + V+ +
Sbjct: 203 GRVFDKI--VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSS- 259
Query: 179 HAGFADDALCYFTRMQRDY----GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
AD A + R + G +++ + L+D+ ++ G + A + + K
Sbjct: 260 ----ADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 235 AKAWGALLGACRNFG-ELGLAEIAGRASAEVEPEN 268
+W A++ G +G ++ + E P++
Sbjct: 316 V-SWNAIITGYAMHGLAVGALDLFDKMRKEDRPDH 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C++ ALN K++H I + L + L+ Y L+N+ N+F K+ +++
Sbjct: 57 CIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP--KQNLF 114
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-----AGFADDALC 188
W+ LI YA +G A+ + +M G++PD T VLKACS G +
Sbjct: 115 LWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYV 174
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ +RD V A+ L+D+ ++ G + +A V + V+ A W ++L A
Sbjct: 175 IKSGWERDLFVGAA------LIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAA 223
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 154/295 (52%), Gaps = 5/295 (1%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A +LF M + T+N +IA + S++++ ++ +M C
Sbjct: 264 AKQLFGEM-TQKDTITWNTLIAGFETLD--SYESLCIFSQMVSEGFSPNCFTFTSVIAAC 320
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
N+A L +++HG I +D + +L + LI+ Y +CG + +S +FS MR ++V+
Sbjct: 321 ANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRH--TNLVS 378
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S++ Y HG K A++ F EM +G+KPD I F+ VL ACSHAG D+ L YF M
Sbjct: 379 WTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMT 438
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
Y V D Y+C+VD+LSRAGR+ EAYE+I MP K W ALLGAC+ + + +
Sbjct: 439 SYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQ 498
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++A E++P A YVLL+ A+ G K G SW+
Sbjct: 499 KLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWI 553
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 108/233 (46%), Gaps = 14/233 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA D++ A +F + N ++ +I + D +F + ++R+M
Sbjct: 149 LMDMYATCCDSMDNARLVFEDIGTK-NAVSWTTLITGYTHRRD-AFGGLRVFRQMFMEEG 206
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ + NL K++H I + + + + + +++ Y RC C +
Sbjct: 207 ELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQ 266
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F +M KD + W++LI+ + ++ +L F +M G P+ TF V+ AC
Sbjct: 267 LFGEM--TQKDTITWNTLIAGFETL-DSYESLCIFSQMVSEGFSPNCFTFTSVIAAC--- 320
Query: 181 GFADDALCYFTRMQR----DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
A+ A+ Y + G++ + + + L+D+ ++ G + +++++ GM
Sbjct: 321 --ANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGM 371
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 148/284 (52%), Gaps = 2/284 (0%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXX-XCVNVAALNLIKEIHG 88
T+N +I+ A QN + + + +YR+M C N+ A + +E+
Sbjct: 229 TWNAMISGYA-QNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEK 287
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
R + L + LI Y RCG LV + VF M + K VV+W+++I Y +HGE
Sbjct: 288 EIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEG 347
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
+ A+E F M +GVKPD F+ VL ACSHAG + L YF M+R YG++ +HYSC
Sbjct: 348 ETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSC 407
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
LVD+L R+GRL EA ++I M VK WGALLGAC+ + LAE+A + E+EP N
Sbjct: 408 LVDLLGRSGRLKEAMDLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIELEPTN 467
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYS 312
YVLL+ +Y+ ++ G S+V Y
Sbjct: 468 IGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNLRKDPGCSYVEYK 511
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 86 IHG----YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+HG +G ND+ +G+ + Y +CG + VF ++ + KD++ W+++IS
Sbjct: 183 LHGCCFKFGFENDL----SVGNSFLTMYVKCGEVEYGRKVFDEI--LVKDLITWNAMISG 236
Query: 142 YALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
YA +G A+ LE ++EM ++ GV PD +T LGVL +C++ G + R +G
Sbjct: 237 YAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDR-FGFR 295
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKV-TAKAWGALLGACRNFGE 250
++S + L+++ +R G L A EV M + + +W A++G GE
Sbjct: 296 SNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGE 346
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 14/304 (4%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL +F +MD + ++N II+ D + + L+ +M C
Sbjct: 288 ALNVFEVMD-EKDMFSWNSIISVHQRCGD-HYGTLKLFDRMLGNKVQPDLVTVTTVLPAC 345
Query: 75 VNVAALNLIKEIHGY---------GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM 125
++AAL +EIHGY G ND D L + L++ Y +CG + ++ VF M
Sbjct: 346 THLAALMHGREIHGYMIVNGLGKEGRNNDFDD-VLLNNALMDMYAKCGSMRDARMVFDNM 404
Query: 126 RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 185
+ KDV +W+ +I+ Y +HG AL+TF M A + P+ I+F+G+L ACSHAG +
Sbjct: 405 TE--KDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKE 462
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
L + M YGV S +HY+C++D+L RAG+L EAY+++ MP K W ALL AC
Sbjct: 463 GLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLAAC 522
Query: 246 RNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTG 305
R + + LAEIA E+EP + NYVL++ +Y VG VK G
Sbjct: 523 RIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKRPG 582
Query: 306 SSWV 309
SW+
Sbjct: 583 CSWI 586
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C L K++H + ++N P + +I Y +C + + VF+ DK+V
Sbjct: 39 CAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDKNVF 98
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVK-PDGITFLGVLKACSHAGFADDALCYFTR 192
A++++I+ + +G ++ + +K+M + GV PD TF V++AC AG +
Sbjct: 99 AYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGL 158
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ + +G+E S LV + + +A+EV +PV+ W +++ G
Sbjct: 159 LFK-FGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVR-DVVLWNSMVNGYAQIG 213
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 12/228 (5%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX-XXXXXCVNVAALNLIKE 85
N +N IIA + N S + LY++M C + + +K+
Sbjct: 96 NVFAYNAIIAGFVS-NGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKK 154
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG + ++ +GS L+ Y + +V++ VF ++ +DVV W+S+++ YA
Sbjct: 155 IHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPV--RDVVLWNSMVNGYAQI 212
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC---YFTRMQRDYGVEAS 202
G + AL F+ M GV P T GVL S G D+ + T+M G +S
Sbjct: 213 GCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKM----GYHSS 268
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ L+D+ + +A V M K +W +++ + G+
Sbjct: 269 VVVLNALIDMYGKCKCASDALNVFEVMDEK-DMFSWNSIISVHQRCGD 315
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 166/309 (53%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA D +A ++F LM + +N +I A N +A++L+R+M
Sbjct: 181 LLHIYAACGDT-ESAYKVFELMG-ERDLVAWNSVINGFAL-NGKPNEALSLFREMSLKGV 237
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + AL L + +H Y ++ + + + + L++ Y +CG + +
Sbjct: 238 EPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQ 297
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VFS+M + ++VV+W+SL+ A++G + AL FKEME + P ITF+GVL ACSH
Sbjct: 298 VFSEMSE--RNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPREITFVGVLYACSHC 355
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ YF RM+ +YG+ +HY C+VD+LSRAG + AYE I+ MP++ A W
Sbjct: 356 GMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRT 415
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGAC G+L L EIA ++EP+++ +YVLL+ +YAS GV
Sbjct: 416 LLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWSDVQTVRRSMIEDGV 475
Query: 301 KSTTGSSWV 309
T G S V
Sbjct: 476 WKTPGYSLV 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 13/247 (5%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN T+N +I A ++D S A+ LYRKM + +
Sbjct: 103 PNVFTWNTMIRGYA-ESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEM 161
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH +RN + + + L+ Y CG ++ VF M ++D+VAW+S+I+ +AL+
Sbjct: 162 IHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMG--ERDLVAWNSVINGFALN 219
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEAS 202
G+ AL F+EM + GV+PDG T + + AC+ G Y ++ G+ +
Sbjct: 220 GKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKV----GLTGN 275
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAGRA 260
+ L+D ++ G + EA +V M + +W +L+ A FGE L
Sbjct: 276 LHVNNSLLDFYAKCGSIREAQQVFSEMSER-NVVSWTSLVVGLAVNGFGEEALGLFKEME 334
Query: 261 SAEVEPE 267
++ P
Sbjct: 335 RQKIVPR 341
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 6/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA + A +LF +M V + T+ +I A + +++++ L+ ++
Sbjct: 142 LVDMYAKCA-VIEDARKLFDVM-VSKDLVTWTVMIGCYADYD--AYESLVLFDRLREEGF 197
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + A++ + ++ Y N + LG+ +I+ Y +CGC+ ++
Sbjct: 198 VSDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSARE 257
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF +M++ K+V++WS++I+AY HG+ K AL+ F M G+ P+ ITF+ +L ACSH+
Sbjct: 258 VFDRMKE--KNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHS 315
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ L +F M RDYGV HY+C+VD+L RAGRL EA ++I M V+ + W A
Sbjct: 316 GLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSA 375
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGACR G + LA + E++P+N YVLL+ +YA G +
Sbjct: 376 LLGACRVHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKL 435
Query: 301 KSTTGSSWV 309
K G +W+
Sbjct: 436 KKVPGWTWI 444
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 151/272 (55%), Gaps = 1/272 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
A +D +A++L+ +M + AL+ + +HGY ++ ++D
Sbjct: 395 AMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLK 454
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
L + L+ +Y +CGC+ + +F++ + KD+VAW+S+I+AY+ HGE E + +++
Sbjct: 455 SLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIK 514
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
++ VKPD +TFLG+L AC ++G D F M YG + S +H +C+VD+L RAG++
Sbjct: 515 LSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKI 574
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFG-ELGLAEIAGRASAEVEPENAANYVLLAKM 278
EA ++I + A+ +G LL AC+ G E AE+A ++EPEN ANYVLL+ +
Sbjct: 575 DEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNI 634
Query: 279 YASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+A+ G G+K T G SWVV
Sbjct: 635 FAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVV 666
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H IRN D + + L++ Y C L ++ +F ++D + VV+WS++I YA
Sbjct: 338 KQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKD--RTVVSWSAMIKGYA 395
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+H AL F EM+++G K D + + +L A + G AL Y + Y ++ +
Sbjct: 396 MHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIG----ALHYVGYLH-GYSLKTNL 450
Query: 204 DHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVT-AKAWGALLGACRNFGE 250
D + L++ ++ G + A ++ + AW +++ A N GE
Sbjct: 451 DSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGE 502
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
V +L + K +H + +++ + + L+ Y + L ++ +F KM + KDVV
Sbjct: 228 VESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPE--KDVVV 285
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFT 191
W+ +IS Y+ G K +LE M +G++PD T + + + + +
Sbjct: 286 WNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVI 345
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
R DY V ++ LVD+ S L+ A ++ G+ T +W A++
Sbjct: 346 RNGSDYQVSV----HNSLVDMYSTCADLNSARKIF-GLIKDRTVVSWSAMI 391
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 140/260 (53%), Gaps = 2/260 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+ ++R+M C + AL + K IH Y +N + + LIE
Sbjct: 227 ALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIE 286
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CGC+ + N+F ++ ++KDV++WS++I A HG+ A++ F+EM V P+
Sbjct: 287 MYAKCGCIDEAWNLFDQL--VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNE 344
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
ITFLGVL ACSH G D+ L YF M Y +E +HY CL+D+L R+G L +A + I
Sbjct: 345 ITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTIS 404
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP+K ++ W +LL +CR L +A IA + E+EPE + NYVLLA MYA G
Sbjct: 405 KMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWED 464
Query: 288 XXXXXXXXXXXGVKSTTGSS 307
+K T GSS
Sbjct: 465 VSNIRKLIRNKRIKKTPGSS 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXX---XXXXXXXXXXCVNVAALNL 82
PN T+N II A N AI+++ +M C + L
Sbjct: 71 PNIFTYNAIIRTYA-HNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRL 129
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD------------- 129
++HG + D H + LI+ Y + G L N+C VF +M D
Sbjct: 130 GMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVK 189
Query: 130 ----------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 173
+ +V+W+++I+ Y G AL+ F+EM+M G++PD I+ + V
Sbjct: 190 LGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAV 249
Query: 174 LKACSHAGFADDALCYFTRMQRDY-GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
L AC+ G + + + M D G + + L+++ ++ G + EA+ + + V+
Sbjct: 250 LPACAQLGALE--VGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQL-VE 306
Query: 233 VTAKAWGALLGACRNFGE 250
+W ++G N G+
Sbjct: 307 KDVISWSTMIGGLANHGK 324
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 140/260 (53%), Gaps = 2/260 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+ ++R+M C + AL + K IH Y +N + + LIE
Sbjct: 227 ALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIE 286
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CGC+ + N+F ++ ++KDV++WS++I A HG+ A++ F+EM V P+
Sbjct: 287 MYAKCGCIDEAWNLFDQL--VEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNE 344
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
ITFLGVL ACSH G D+ L YF M Y +E +HY CL+D+L R+G L +A + I
Sbjct: 345 ITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTIS 404
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP+K ++ W +LL +CR L +A IA + E+EPE + NYVLLA MYA G
Sbjct: 405 KMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWED 464
Query: 288 XXXXXXXXXXXGVKSTTGSS 307
+K T GSS
Sbjct: 465 VSNIRKLIRNKRIKKTPGSS 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 37/258 (14%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXX---XXXXXXXXXXCVNVAALNL 82
PN T+N II A N AI+++ +M C + L
Sbjct: 71 PNIFTYNAIIRTYA-HNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRL 129
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD------------- 129
++HG + D H + LI+ Y + G L N+C VF +M D
Sbjct: 130 GMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVK 189
Query: 130 ----------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 173
+ +V+W+++I+ Y G AL+ F+EM+M G++PD I+ + V
Sbjct: 190 LGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAV 249
Query: 174 LKACSHAGFADDALCYFTRMQRDY-GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
L AC+ G + + + M D G + + L+++ ++ G + EA+ + + V+
Sbjct: 250 LPACAQLGALE--VGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQL-VE 306
Query: 233 VTAKAWGALLGACRNFGE 250
+W ++G N G+
Sbjct: 307 KDVISWSTMIGGLANHGK 324
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 4/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L E F M N ++N +IA +N+ AI L+ +M
Sbjct: 354 DLKRVKEFFENMP-HKNLISWNSVIAGYE-KNEDYKGAIELFSQMQLKGERPDRHTLSSI 411
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+ L L K+IH + + + P + + LI Y RCG + ++ +VF++M+ + K
Sbjct: 412 LSVSTGLVDLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYK 469
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV+ W+++I YA HG A ALE F+ M+ ++P ITF+ VL AC+HAG ++ F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M DYG+E +H++ LVD+L R G+L EA ++I MPVK WGALLGACR
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ LA++A +A +EPE++A Y LL +YA +G VK G SW+
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 97 PHPQLGS--GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
P P + S +I + + G L F M K++++W+S+I+ Y + + K A+E
Sbjct: 335 PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPH--KNLISWNSVIAGYEKNEDYKGAIEL 392
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F +M++ G +PD T +L + G D L V + L+ + S
Sbjct: 393 FSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYS 450
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
R G + +A V M + W A++G
Sbjct: 451 RCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 4/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L E F M N ++N +IA +N+ AI L+ +M
Sbjct: 354 DLKRVKEFFENMP-HKNLISWNSVIAGYE-KNEDYKGAIELFSQMQLKGERPDRHTLSSI 411
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+ L L K+IH + + + P + + LI Y RCG + ++ +VF++M+ + K
Sbjct: 412 LSVSTGLVDLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYK 469
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV+ W+++I YA HG A ALE F+ M+ ++P ITF+ VL AC+HAG ++ F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M DYG+E +H++ LVD+L R G+L EA ++I MPVK WGALLGACR
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ LA++A +A +EPE++A Y LL +YA +G VK G SW+
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 97 PHPQLGS--GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
P P + S +I + + G L F M K++++W+S+I+ Y + + K A+E
Sbjct: 335 PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPH--KNLISWNSVIAGYEKNEDYKGAIEL 392
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F +M++ G +PD T +L + G D L V + L+ + S
Sbjct: 393 FSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYS 450
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
R G + +A V M + W A++G
Sbjct: 451 RCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 4/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L E F M N ++N +IA +N+ AI L+ +M
Sbjct: 354 DLKRVKEFFENMP-HKNLISWNSVIAGYE-KNEDYKGAIELFSQMQLKGERPDRHTLSSI 411
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+ L L K+IH + + + P + + LI Y RCG + ++ +VF++M+ + K
Sbjct: 412 LSVSTGLVDLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYK 469
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV+ W+++I YA HG A ALE F+ M+ ++P ITF+ VL AC+HAG ++ F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M DYG+E +H++ LVD+L R G+L EA ++I MPVK WGALLGACR
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ LA++A +A +EPE++A Y LL +YA +G VK G SW+
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 97 PHPQLGS--GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
P P + S +I + + G L F M K++++W+S+I+ Y + + K A+E
Sbjct: 335 PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPH--KNLISWNSVIAGYEKNEDYKGAIEL 392
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F +M++ G +PD T +L + G D L V + L+ + S
Sbjct: 393 FSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYS 450
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
R G + +A V M + W A++G
Sbjct: 451 RCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 4/299 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L E F M N ++N +IA +N+ AI L+ +M
Sbjct: 354 DLKRVKEFFENMP-HKNLISWNSVIAGYE-KNEDYKGAIELFSQMQLKGERPDRHTLSSI 411
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+ L L K+IH + + + P + + LI Y RCG + ++ +VF++M+ + K
Sbjct: 412 LSVSTGLVDLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYK 469
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
DV+ W+++I YA HG A ALE F+ M+ ++P ITF+ VL AC+HAG ++ F
Sbjct: 470 DVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQF 529
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M DYG+E +H++ LVD+L R G+L EA ++I MPVK WGALLGACR
Sbjct: 530 NSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSN 589
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ LA++A +A +EPE++A Y LL +YA +G VK G SW+
Sbjct: 590 VDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 97 PHPQLGS--GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
P P + S +I + + G L F M K++++W+S+I+ Y + + K A+E
Sbjct: 335 PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPH--KNLISWNSVIAGYEKNEDYKGAIEL 392
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F +M++ G +PD T +L + G D L V + L+ + S
Sbjct: 393 FSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYS 450
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
R G + +A V M + W A++G
Sbjct: 451 RCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
+IS +A D + E+F LM+ V P+ ++ +++ QN + +A ++KM
Sbjct: 239 LISGFAQKCDREMVS-EIFRLMNEDRVEPDVVSWTSVLSGFV-QNFRNEEAFDAFKKMLL 296
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C A + KEIHGY + ++ + S L++ Y +CG +
Sbjct: 297 LGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISE 356
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKA 176
+ +F KM + K+ V +S+I YA HG + A+E F +MEM GV K D +TF L A
Sbjct: 357 ARTLFYKMPE--KNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTA 414
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
CSH G + F MQ Y +E +HY+C+VD+ RAG+L EAY +I+ MPVK
Sbjct: 415 CSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLF 474
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
WGALL ACRN G + LAE+A + +E+EPE+A N +LL+ +YA G
Sbjct: 475 VWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIK 534
Query: 297 XXGVKSTTGSSWV 309
++ G SW+
Sbjct: 535 KGKLRKLQGLSWI 547
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H N + S LI Y CG L + +F K+ ++ W +LI+ A
Sbjct: 49 KKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQ--TNIHRWIALIATCA 106
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFL--GVLKACSHAG---FADDALCYFTRMQRDYG 198
G ALE F EM+ + F+ VLKAC H G + + C + +
Sbjct: 107 RCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEID 166
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
S S L+ + S+ G + +A +V GM VK
Sbjct: 167 AFVS----SALIVMYSKCGEVRDARKVFDGMVVK 196
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++H ++ + + S LI Y +CG + ++ VF M + KD+VA ++++S YA
Sbjct: 152 EQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGM--VVKDLVAMNAVVSGYA 209
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD----DALCYFTRMQRDYGV 199
G AL + M++ GV P+ +T+ ++ +GFA + + R+ + V
Sbjct: 210 QQGLPNEALSLVENMKLMGVNPNVVTWNALI-----SGFAQKCDREMVSEIFRLMNEDRV 264
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK---VTAKAWGALLGAC 245
E ++ ++ + R EA++ + M + T+ ALL AC
Sbjct: 265 EPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPAC 313
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 153/280 (54%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N II+ +++ G A++ + +M C N+A + L K+IHG
Sbjct: 541 SWNSIISGFSSEKQGE-NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQ 599
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ + + S +++ Y +CG + +S +F K +D V WS++I AYA HG +
Sbjct: 600 ILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPK--RDYVTWSAMICAYAYHGLGE 657
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
A++ F+EM++ VKP+ F+ VL+AC+H GF D L YF M+ YG++ +HYSC+
Sbjct: 658 DAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L R+G+++EA E+I MP + W LLG CR G + +AE A + +++P+++
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDS 777
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ YVLL+ +YA G +K G SW+
Sbjct: 778 SAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 12/241 (4%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N IIAA QN+ + +AL+ M C ALN E+HG
Sbjct: 440 SWNAIIAA-HEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I++ + +GS +I+ Y +CG LV + + ++ + + V+W+S+IS ++ + +
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE--RTTVSWNSIISGFSSEKQGE 556
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--S 207
AL F M GV PD T+ VL C++ + ++ + ++ SD Y S
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK---LQLHSDVYIAS 613
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
+VD+ S+ G + ++ + P K W A++ A + GL E A + E++ +
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICA---YAYHGLGEDAIKLFEEMQLQ 669
Query: 268 N 268
N
Sbjct: 670 N 670
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 19/274 (6%)
Query: 2 ISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
+ +YA D + A ++F+ P +S N +I A Q D +A+ ++R +
Sbjct: 313 LDMYAKC-DRMVDARKVFNTFPNPTRQS-HNALIVGYARQ-DQVLEALEIFRSLQKSYLD 369
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
C + ++HG ++ +D + + + +++ Y +CG L+ +C +
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLI 429
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS--- 178
F M KD V+W+++I+A+ + + L F M + ++PD TF V+KAC+
Sbjct: 430 FDDMEI--KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKK 487
Query: 179 --HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
+ G + M D+ V ++ C +L A ++HE E + T
Sbjct: 488 ALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE-------ERTTV 540
Query: 237 AWGALLG--ACRNFGELGLAEIAGRASAEVEPEN 268
+W +++ + GE L+ + V P+N
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDN 574
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 42/209 (20%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDM--- 128
C N+ A+N K+ H P + + L++ Y +C L + NVF KM RD+
Sbjct: 48 CSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISW 107
Query: 129 ------------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
++DVV+W+S++S Y +G + ++E F +M + ++
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 165 PDGITFLGVLKACSHAGFADDAL-----CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
D TF VLKAC+ G D L C +M D V + LVD+ S +L
Sbjct: 168 HDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTG----TALVDMYSTCKKL 221
Query: 220 HEAYEVIRGMPVKVTAKAWGALL-GACRN 247
A+ + MP + + W A++ G RN
Sbjct: 222 DHAFNIFCEMPER-NSVCWSAVIAGYVRN 249
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 19/275 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +Y+ + L A +F ++P S + A +ND + + LY+ M
Sbjct: 211 LVDMYS-TCKKLDHAFNIF--CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGM 267
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++A L ++H Y ++ + +G+ ++ Y +C +V++
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARK 327
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF+ + + + ++LI YA + ALE F+ ++ + + D I+ G L ACS
Sbjct: 328 VFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI 385
Query: 181 GFADDALCYFTRMQ-RDYGVEASSDHYSC----LVDVLSRAGRLHEAYEVIRGMPVKVTA 235
Y +Q V+ D C ++D+ ++ G L EA + M +K A
Sbjct: 386 K------GYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DA 438
Query: 236 KAWGALLGACRN--FGELGLAEIAGRASAEVEPEN 268
+W A++ A E LA + +EP++
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDD 473
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN K+I ++ KM C + L ++H I+ D
Sbjct: 147 QNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVV 206
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
G+ L++ Y C L ++ N+F +M +++ V WS++I+ Y + L+ +K M
Sbjct: 207 TGTALVDMYSTCKKLDHAFNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 161 AGVKPDGITFLGVLKACS 178
G+ TF ++C+
Sbjct: 265 EGMGVSQATFASAFRSCA 282
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 153/280 (54%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N II+ +++ G A++ + +M C N+A + L K+IHG
Sbjct: 541 SWNSIISGFSSEKQGE-NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQ 599
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ + + S +++ Y +CG + +S +F K +D V WS++I AYA HG +
Sbjct: 600 ILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPK--RDYVTWSAMICAYAYHGLGE 657
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
A++ F+EM++ VKP+ F+ VL+AC+H GF D L YF M+ YG++ +HYSC+
Sbjct: 658 DAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L R+G+++EA E+I MP + W LLG CR G + +AE A + +++P+++
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDS 777
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ YVLL+ +YA G +K G SW+
Sbjct: 778 SAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 12/241 (4%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N IIAA QN+ + +AL+ M C ALN E+HG
Sbjct: 440 SWNAIIAA-HEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
I++ + +GS +I+ Y +CG LV + + ++ + + V+W+S+IS ++ + +
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE--RTTVSWNSIISGFSSEKQGE 556
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--S 207
AL F M GV PD T+ VL C++ + ++ + ++ SD Y S
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK---LQLHSDVYIAS 613
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
+VD+ S+ G + ++ + P K W A++ A + GL E A + E++ +
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICA---YAYHGLGEDAIKLFEEMQLQ 669
Query: 268 N 268
N
Sbjct: 670 N 670
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 19/274 (6%)
Query: 2 ISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
+ +YA D + A ++F+ P +S N +I A Q D +A+ ++R +
Sbjct: 313 LDMYAKC-DRMVDARKVFNTFPNPTRQS-HNALIVGYARQ-DQVLEALEIFRSLQKSYLD 369
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
C + ++HG ++ +D + + + +++ Y +CG L+ +C +
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLI 429
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS--- 178
F M KD V+W+++I+A+ + + L F M + ++PD TF V+KAC+
Sbjct: 430 FDDMEI--KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKK 487
Query: 179 --HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
+ G + M D+ V ++ C +L A ++HE E + T
Sbjct: 488 ALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE-------ERTTV 540
Query: 237 AWGALLG--ACRNFGELGLAEIAGRASAEVEPEN 268
+W +++ + GE L+ + V P+N
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDN 574
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 42/209 (20%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDM--- 128
C N+ A+N K+ H P + + L++ Y +C L + NVF KM RD+
Sbjct: 48 CSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISW 107
Query: 129 ------------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
++DVV+W+S++S Y +G + ++E F +M + ++
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167
Query: 165 PDGITFLGVLKACSHAGFADDAL-----CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
D TF VLKAC+ G D L C +M D V + LVD+ S +L
Sbjct: 168 HDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTG----TALVDMYSTCKKL 221
Query: 220 HEAYEVIRGMPVKVTAKAWGALL-GACRN 247
A+ + MP + + W A++ G RN
Sbjct: 222 DHAFNIFCEMPER-NSVCWSAVIAGYVRN 249
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 19/275 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +Y+ + L A +F ++P S + A +ND + + LY+ M
Sbjct: 211 LVDMYS-TCKKLDHAFNIF--CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGM 267
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++A L ++H Y ++ + +G+ ++ Y +C +V++
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARK 327
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF+ + + + ++LI YA + ALE F+ ++ + + D I+ G L ACS
Sbjct: 328 VFNTFPNPTRQ--SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAI 385
Query: 181 GFADDALCYFTRMQ-RDYGVEASSDHYSC----LVDVLSRAGRLHEAYEVIRGMPVKVTA 235
Y +Q V+ D C ++D+ ++ G L EA + M +K A
Sbjct: 386 K------GYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DA 438
Query: 236 KAWGALLGACRN--FGELGLAEIAGRASAEVEPEN 268
+W A++ A E LA + +EP++
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDD 473
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN K+I ++ KM C + L ++H I+ D
Sbjct: 147 QNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVV 206
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
G+ L++ Y C L ++ N+F +M +++ V WS++I+ Y + L+ +K M
Sbjct: 207 TGTALVDMYSTCKKLDHAFNIFCEMP--ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264
Query: 161 AGVKPDGITFLGVLKACS 178
G+ TF ++C+
Sbjct: 265 EGMGVSQATFASAFRSCA 282
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 2/276 (0%)
Query: 34 IIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN 93
++ + +N +A+ LY +M C +++AL L + IH Y +
Sbjct: 258 VMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKK 317
Query: 94 DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALE 153
+ P+ L + LI+ Y RCGCL ++ VF +M+ +DV +W+SLISAY + G+ A+
Sbjct: 318 KLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF--RDVASWTSLISAYGMTGQGCNAVA 375
Query: 154 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 213
F EM +G PD I F+ +L ACSH+G D+ YF +M DY + +HY+CLVD+L
Sbjct: 376 LFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLL 435
Query: 214 SRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYV 273
RAGR+ EAY +I+ MP++ + W LL +CR F + + +A ++ PE + YV
Sbjct: 436 GRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYV 495
Query: 274 LLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LL+ +YA G ++ T G S V
Sbjct: 496 LLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNV 531
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG ++ +D + +G+GLI YG+CGCL + VF +M + KDVV+W+S+++ YA +
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM--IWKDVVSWNSMVAGYAHN 198
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
ALE +EME G KPDG T ++ A ++
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLMPAVANT 233
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ +K++H + +P LG L+ +Y CG + VF +M D ++VV ++ +I
Sbjct: 34 IKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSD--RNVVFYNVMI 91
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+Y + L F+EM G +PD T+ VLKACS
Sbjct: 92 RSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACS 130
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 153/285 (53%), Gaps = 6/285 (2%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN T+N I+A L +N A+ L+ +M C +A ++ K+
Sbjct: 505 PNVYTWNSILAGLV-ENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQ 563
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H Y IR D +G+ L++ Y +CG + + V++K+ + ++V +++++AYA+H
Sbjct: 564 VHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISN--PNLVCHNAMLTAYAMH 621
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-CYFTRMQRDYGVEASSD 204
G + + F+ M + V+PD +TFL VL +C HAG C++ + Y + +
Sbjct: 622 GHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFY--LMETYNITPTLK 679
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+C+VD+LSRAG+L EAY++I+ MP++ + W ALLG C E+ L EIA E+
Sbjct: 680 HYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIEL 739
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
EP N NYVLLA +YAS G G++ + G SW+
Sbjct: 740 EPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWI 784
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 16 LELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
LE L ++ PN T++ +I ++ N +++ L+ +M C
Sbjct: 223 LENMLLSELEPNVVTWSAVIGGFSS-NAYDVESVELFARMVGAGVAPDARTLASVLPACS 281
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ L + KE+HGY +R+++ + + + L+ Y RCG + ++ +FSK K ++
Sbjct: 282 RMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFA--RKCAASY 339
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++I Y +G A E F +ME GV+ D I++ ++ DDAL F +
Sbjct: 340 NTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLM 399
Query: 196 DYGVEASS 203
+ G+E S
Sbjct: 400 E-GIEPDS 406
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L +++HG +++ + +G+ LI+ YG+CG L + V M KD V
Sbjct: 144 CCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQ--KDCV 201
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I+A +G AL+ + M ++ ++P+ +T+ V+ S + +++ F RM
Sbjct: 202 SWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM 261
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 102/255 (40%), Gaps = 46/255 (18%)
Query: 11 NLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXX 67
N+ A ELF+ M+ V + ++N +I+ N A+ L+R +
Sbjct: 351 NVGKAKELFYQMEQEGVERDRISWNCMISG-HVDNFMFDDALMLFRDLLMEGIEPDSFTL 409
Query: 68 XXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS--------- 118
++ + KEIH I + + +G L+E Y +C ++ +
Sbjct: 410 GSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE 469
Query: 119 ---------------CNVFSKMRDM---------DKDVVAWSSLISAYALHGEAKAALET 154
CN K+R++ + +V W+S+++ + + A++
Sbjct: 470 RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQL 529
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD---HY-SCLV 210
F EM+++ ++PD T +L ACS A + + Y + A D H + LV
Sbjct: 530 FNEMQVSSLRPDIYTVGIILAACSKL-----ATIHRGKQVHAYSIRAGYDSDAHIGATLV 584
Query: 211 DVLSRAGRLHEAYEV 225
D+ ++ G + Y+V
Sbjct: 585 DMYAKCGSIKHCYQV 599
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 11/315 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M+S YA + L ++M+ N ++N +IA QN + +A+ L+ +
Sbjct: 325 MVSGYAKASSVKAARLMFSNMME--RNVVSWNALIAGYT-QNGENEEAVRLFLLLKRESI 381
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIH------GYGIRNDIDPHPQLGSGLIEAYGRCGC 114
C N+A L L ++ H G+ ++ D +G+ LI+ Y +CG
Sbjct: 382 WPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+ + VF +M +++D V+W+++I YA +G ALE F+EM ++G +PD +T +GVL
Sbjct: 442 VEDGRLVFERM--LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVL 499
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
ACSHAG ++ CYF M ++G+ DHY+C+VD+L RAG L EA +I+ MP++
Sbjct: 500 SACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPD 559
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
A WG+LL AC+ G + L + E++P N+ YVLL+ MYA +G
Sbjct: 560 AVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQ 619
Query: 295 XXXXGVKSTTGSSWV 309
GV G SW+
Sbjct: 620 MRQMGVIKQPGCSWI 634
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L AL LF M ++ ++N +++ A Q D +A+ M
Sbjct: 101 LDEALNLFKCMP-ERDQCSWNAMVSGFA-QRDRFEEALRFVVDMHSEDFVLNEYSFGSAL 158
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-K 130
C + L++ +IHG ++ +GS L++ Y +C + ++ F DMD +
Sbjct: 159 SACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD---DMDVR 215
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
++V+W+SLI+ Y +G A ALE F M G++PD IT V AC+ + L
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
R+ + + LVD+ ++ R++EA V MP++
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 152/310 (49%), Gaps = 36/310 (11%)
Query: 1 MISLYAHSPDNLP-TALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
MI+ YA + +P ALELF +M + ++ NPI Q
Sbjct: 251 MIACYA--KNEMPMKALELFQIMMLEACDTVPNPITMVSVLQ------------------ 290
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++AAL K +H Y +R +D + + LI YGRCG +
Sbjct: 291 -------------ACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQ 337
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF M+ +DV++W+SLIS Y +HG K A++ F+ M GV P ITF+ VL ACSH
Sbjct: 338 RVFDYMKK--RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSH 395
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG ++A F M Y + +HY+C+VD+L RA RL EA E+I+ M K WG
Sbjct: 396 AGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWG 455
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
+LLG+CR + LAE A E+EP+NA NYVLL+ +YA G
Sbjct: 456 SLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRG 515
Query: 300 VKSTTGSSWV 309
++ SW+
Sbjct: 516 LQKIPSCSWI 525
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV----NVAALNLIKE 85
+N I ALA + G + LY +M CV ++ L KE
Sbjct: 142 VWNAIFRALAMASRGE-DLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKE 200
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH + +R+ + H + + L++ Y R G + + +VF M D K++V+WS++I+ YA +
Sbjct: 201 IHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPD--KNIVSWSAMIACYAKN 258
Query: 146 GEAKAALETFKEM--EMAGVKPDGITFLGVLKAC-SHAGFADDALCYFTRMQRDYGVEAS 202
ALE F+ M E P+ IT + VL+AC S A L + ++R G++++
Sbjct: 259 EMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR--GLDST 316
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+ L+ + R G + V M K +W +L+ +G GL + A
Sbjct: 317 LPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLISI---YGMHGLGKKA 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+ +L+ ++H + + +D P L + LI Y G + ++C VF + R+ K +
Sbjct: 84 CIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETRE--KTIF 141
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++ A A+ + L + +M G+ + T+ VLKAC ++ ++C +
Sbjct: 142 VWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACV---VSELSICPLRKG 198
Query: 194 QR------DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ +G E + L+DV +R G + A V MP K +W A++ AC
Sbjct: 199 KEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDK-NIVSWSAMI-ACYA 256
Query: 248 FGELGL 253
E+ +
Sbjct: 257 KNEMPM 262
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 147/273 (53%), Gaps = 8/273 (2%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX----XXXXXXXXXXX 70
AL LF M+ N T+N II L Q + +++ ++ +M
Sbjct: 214 ALNLFRKMN-GRNIITWNSIITGLV-QAGHAKESLEIFHEMQFLSGDDVVKPDKITIASV 271
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + +++ K +H Y +NDI+ +G+ L+ YG+CG + + +F+ M + K
Sbjct: 272 LSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPE--K 329
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D AW+++IS +ALHG K A + F EME AGVKP+ +TF+G+L ACSH+G + C F
Sbjct: 330 DASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCF 389
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M+R Y +E HY+C+VD+LSRA EA +IR MP+K WGALLG C+ G
Sbjct: 390 DVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGN 449
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ L E ++EP N A Y+ L +Y G
Sbjct: 450 IKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAG 482
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ ++ Y R G + + N+F KM ++++ W+S+I+ G AK +LE F EM+
Sbjct: 199 NSMVVGYLRNGEVEMALNLFRKMNG--RNIITWNSIITGLVQAGHAKESLEIFHEMQFLS 256
Query: 163 ----VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
VKPD IT VL AC+ G D ++++ +E + LV++ + G
Sbjct: 257 GDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKN-DIECDVVIGTALVNMYGKCGD 315
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLG--ACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
+ +A E+ MP K A AW A++ A FG+ A V+P + LL+
Sbjct: 316 VQQAIEIFNDMPEK-DASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLS 374
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 131/237 (55%), Gaps = 3/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL KE+H Y + + +GS LI+ Y +CG L S VF K+++ K++
Sbjct: 253 CAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKE--KNLF 310
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+I A HG AK AL F EME G++P+ +TF+ VL AC+HAGF + +FT M
Sbjct: 311 CWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSM 370
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
DY + +HY C+VD+LS+ G L +A E+IRGM + + WGALL C+ L +
Sbjct: 371 IEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEI 430
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV-KSTTGSSWV 309
A + R +EP N+ +Y LL MYA V GV K GSSW+
Sbjct: 431 ARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWI 487
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 159/306 (51%), Gaps = 5/306 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+IS ++ D L E F M N ++N +IA +N+ AI L+ +M
Sbjct: 271 IISGFSQIGD-LKRVKEFFENMP-HKNLISWNSVIAGYE-KNEDYKGAIELFSQMQLKGE 327
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+ L L K+IH + + + P + + LI Y RCG + ++ +
Sbjct: 328 RPDRHTLSSILSVSTGLVDLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARH 386
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF++M+ + KDV+ W+++I YA HG A ALE F+ M+ ++P ITF+ VL AC+HA
Sbjct: 387 VFNEMK-LYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHA 445
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G ++ F M DYG+E +H++ LVD+L R G+L EA ++I MPVK WGA
Sbjct: 446 GLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGA 505
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLGACR + LA++A +A +EPE++A Y LL +YA +G V
Sbjct: 506 LLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNV 565
Query: 301 KSTTGS 306
K GS
Sbjct: 566 KKQAGS 571
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 97 PHPQLGS--GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
P P + S +I + + G L F M K++++W+S+I+ Y + + K A+E
Sbjct: 261 PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPH--KNLISWNSVIAGYEKNEDYKGAIEL 318
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F +M++ G +PD T +L + G D L V + L+ + S
Sbjct: 319 FSQMQLKGERPDRHTLSSILSVST--GLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYS 376
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
R G + +A V M + W A++G
Sbjct: 377 RCGEIGDARHVFNEMKLYKDVITWNAMIGG 406
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 153/283 (54%), Gaps = 5/283 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS YA + + + A E+F M V N ++N +I QN A+ M
Sbjct: 396 MISGYAQAGE-MDRATEIFEAMGVR-NVISWNSLITGFL-QNGLYLDALKSLVLMGQEGK 452
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C N+AAL + K++H +++ + + LI Y +CG + ++
Sbjct: 453 KPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEK 512
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF + +D +++W+SLIS YAL+G A A F++M G PD +TF+G+L ACSHA
Sbjct: 513 VFKDIEGVD--LISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHA 570
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + + F M + +E ++HYSCLVD+L R GRL EA+ ++RGM VK A WG+
Sbjct: 571 GLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGS 630
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL ACR + L +IA E+EP NA+NY+ L+ M+A G
Sbjct: 631 LLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAG 673
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ L+R++ +AAL+L K++H + +R++I L + LI
Sbjct: 225 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLI 284
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKP 165
+ Y +CG L S +F M ++ V++W++++ Y+ HGE + L+ F M E VKP
Sbjct: 285 DMYSKCGNLTYSRRIFDTM--YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKP 342
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
D +T L VL CSH G D L F M VE +HY C+VD+L R+GR+ EA+E
Sbjct: 343 DSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFE 402
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
I+ MP + TA WG+LLGACR + + E AG+ E+EP NA NYV+L+ +YAS G
Sbjct: 403 FIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAG 461
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CVN A + +H + I+ P L + LI Y +C L ++ NVF +M + ++VV
Sbjct: 50 CVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPE--RNVV 107
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA-GFADDALCYFTR 192
+W+++ISAY+ G A AL F +M +G +P+ TF VL +C+ + GF +
Sbjct: 108 SWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHSLI 167
Query: 193 MQRDYGVEASSDHY---SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
++ +Y DH S L+D+ ++ G++HEA V +P + + G +
Sbjct: 168 IKLNY-----EDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISG----YA 218
Query: 250 ELGLAEIAGRASAEVEPEN-AANYV 273
+LGL E A ++ E +NYV
Sbjct: 219 QLGLDEEALELFRRLQGEGMKSNYV 243
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 12/280 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY D+L A +F M N ++ +I+A + + S +A+ L+ +M
Sbjct: 81 LIVLYTKC-DSLGDAHNVFDEMP-ERNVVSWTAMISAYSQRGYAS-QALNLFLQMLRSGT 137
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + L ++IH I+ + + H +GS L++ Y + G + +
Sbjct: 138 EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEART 197
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF + + +DVV+ +++IS YA G + ALE F+ ++ G+K + +T+ GVL A S
Sbjct: 198 VFECLPE--RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGL 255
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
D + R + + + L+D+ S+ G L + + M + T +W A
Sbjct: 256 AALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYER-TVISWNA 313
Query: 241 LLGACRNFGE----LGLAEIAGRASAEVEPENAANYVLLA 276
+L GE L L + R +V+P++ +L+
Sbjct: 314 MLVGYSKHGEGREVLKLFTLM-REETKVKPDSVTILAVLS 352
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 135/239 (56%), Gaps = 4/239 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ L+R++ +AAL+L K++H + +R++I L + LI
Sbjct: 41 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLI 100
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKP 165
+ Y +CG L S +F M ++ V++W++++ Y+ HGE + L+ F M E VKP
Sbjct: 101 DMYSKCGNLTYSRRIFDTM--YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKP 158
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
D +T L VL CSH G D L F M VE +HY C+VD+L R+GR+ EA+E
Sbjct: 159 DSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFE 218
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
I+ MP + TA WG+LLGACR + + E AG+ E+EP NA NYV+L+ +YAS G
Sbjct: 219 FIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAG 277
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 141/246 (57%), Gaps = 8/246 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +AAL KEIH Y ++ + +GS L++ Y +CGCL S VF +M ++V+
Sbjct: 519 CAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV--RNVI 576
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG-----VKPDGITFLGVLKACSHAGFADDALC 188
W+ LI AY +HG+ + AL+ F+ M G ++P+ +T++ + + SH+G D+ L
Sbjct: 577 TWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLN 636
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKV-TAKAWGALLGACRN 247
F M+ +G+E +SDHY+CLVD+L R+G++ EAY +I+ MP + AW +LLGAC+
Sbjct: 637 LFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKI 696
Query: 248 FGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
L + EIA + ++P A+ YVLL+ +Y+S G GV+ G S
Sbjct: 697 HQNLEIGEIAAKNLFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCS 756
Query: 308 WVVYSE 313
W+ + +
Sbjct: 757 WIEHGD 762
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVN-VAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
A+ L+R M C N + L L K++H + +RN D + L+
Sbjct: 170 AVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALV 228
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y + G + + +F D KD+V+W+++IS+ + + + AL M +GV+P+
Sbjct: 229 TMYAKLGRVYEAKTLFDVFDD--KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPN 286
Query: 167 GITFLGVLKACSHAGF--ADDALCYFTRMQRDYGVEASSDHYSC-LVDVLSRAGRLHEAY 223
G+T VL ACSH + F M D +E S C LVD+ + +
Sbjct: 287 GVTLASVLPACSHLEMLGCGKEIHAFVLMNNDL-IENS--FVGCALVDMYCNCKQPEKGR 343
Query: 224 EVIRGMPVKVTAKAWGALL-GACRN 247
V GM + T W A++ G RN
Sbjct: 344 LVFDGM-FRRTIAVWNAMIAGYVRN 367
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXX 58
++++YA L E L DV ++ ++N II++L+ QND +A+ M
Sbjct: 227 LVTMYA----KLGRVYEAKTLFDVFDDKDLVSWNTIISSLS-QNDRFEEALLYLHVMLQS 281
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGI-RNDIDPHPQLGSGLIEAYGRCGCLVN 117
C ++ L KEIH + + ND+ + +G L++ Y C
Sbjct: 282 GVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEK 341
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKA 176
VF M + + W+++I+ Y + A+E F EM G+ P+ +T VL A
Sbjct: 342 GRLVFDGM--FRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA 399
Query: 177 CSHA-GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTA 235
C F D + ++ +G E + L+D+ SR GR+ A + M K
Sbjct: 400 CVRCESFLDKEGIHSCVVK--WGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIV 457
Query: 236 KAWGALL 242
+W ++
Sbjct: 458 -SWNTMI 463
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 40 AQNDGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPH 98
Q+ +F +AI+ Y M + LNL K++H + +
Sbjct: 60 TQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALP 119
Query: 99 PQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
+ + + YG+CG + + VF ++ ++D V+W+S+I+A E + A+ F+ M
Sbjct: 120 TAVPNSFVNMYGKCGDIDAARRVFDEI--TNRDDVSWNSMINAACRFEEWELAVHLFRLM 177
Query: 159 EMAGVKPDGITFLGVLKACSH 179
+ V P T + V ACS+
Sbjct: 178 LLENVGPTSFTLVSVAHACSN 198
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 3/286 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
+ + +++ II+ QN + KA+ ++R+M C ++AAL
Sbjct: 374 IAKDTVSYSAIISG-CVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
HGY + + + +I+ Y +CG + S +F +M++ +D+++W+++I Y
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQN--RDIISWNTMIIGYG 490
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+HG AL F+E++ G+KPD +T + VL ACSH+G + +F+ M +++ ++
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY C+VD+L+RAG L EAY I+ MP + WGALL ACR + + E +
Sbjct: 551 AHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQL 610
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ PE N+VL++ +Y+SVG G K + G SWV
Sbjct: 611 LGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWV 656
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L K++H + I++ +D +G+ LI Y +CG + N+ +M + KD V
Sbjct: 322 CAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM--IAKDTV 379
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTR 192
++S++IS +G A+ AL F++M+ +G+ P T + +L ACSH A C+
Sbjct: 380 SYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYT 439
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+ R + + S + ++D+ S+ G++ + E+ M
Sbjct: 440 VVRGFTNDTSI--CNAIIDMYSKCGKITISREIFDRM 474
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 20 HLMDVPPNEST--FNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
H+ D P S +N +I A G F+ +I LY M C +
Sbjct: 62 HVFDQIPKPSVVLWNMMIRTYAW--SGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ AL L + IH + + + + L+ Y +CG L + +F+ + D+D+VAW+
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
++I+A++ H + + +M+ AGV P+ T + +L A
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQAN 224
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
AL+ K IH Y IRN + L + L++ Y +C L + +F+ + K+ V WS++
Sbjct: 225 ALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN--KKNDVCWSAM 282
Query: 139 ISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACS 178
I Y LH AL + +M + G+ P T +L+AC+
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACA 323
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 139/244 (56%), Gaps = 2/244 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQ+ +A+AL+++M C ++AAL+L K IH Y +N+ + +
Sbjct: 416 AQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNV 475
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
LG+ L++ Y +CGC+ N+ VF M + K V W++LI A++G + +L F +M+
Sbjct: 476 ILGTTLVDMYMKCGCVENALEVFYAMEE--KGVSTWNALILGLAMNGLVEKSLNVFADMK 533
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
P+ ITF+GVL AC H G D+ YF+ M +++ +E + HY C+VD+L RAG L
Sbjct: 534 KTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLL 593
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA E+I MP+ WGALLGACR + E GR +++P++ +VLL+ +Y
Sbjct: 594 KEAEELIESMPMAPDVATWGALLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVLLSNIY 653
Query: 280 ASVG 283
AS G
Sbjct: 654 ASKG 657
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 37/234 (15%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN +A+ L+ M C +++A+ + + +HG + I +
Sbjct: 285 QNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVS 344
Query: 101 LGSGLIEAYGRCGCLVNSCNVFS---------------------------KMRD--MDKD 131
L + LI Y CG ++++ +FS K+ D ++KD
Sbjct: 345 LQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKD 404
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL---C 188
VV+WS++IS YA HG A+ F+EM++ G++PD + V+ AC+H D
Sbjct: 405 VVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHA 464
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
Y ++ + + V + LVD+ + G + A EV M K W AL+
Sbjct: 465 YISKNEFNVNVILGTT----LVDMYMKCGCVENALEVFYAMEEK-GVSTWNALI 513
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
N+ A +F + VP N ST ++A A QN + +AI +Y KM
Sbjct: 258 NVSEARRIFDEITVPWNPSTCAALLACYA-QNGHAREAIEMYEKMRRAKIKVTDVAMVGA 316
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSG-LIEAYGRCGCLVNSCNVFSKMRDMD 129
C + + + + Y I + S LI +CG + + F+ MR+
Sbjct: 317 ISACAQLRDIRMSNSL-TYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRN-- 373
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+D+ +S++I+A+A HG+++ A++ F +M+ G+KP+ +TF+GVL ACS +G ++ +
Sbjct: 374 RDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCRF 433
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M YG+E +HY+C+VD+L RAG+L +AY +I+ A WG+LL ACR +G
Sbjct: 434 FQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG 493
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ L EIA R E++P ++ NYVLLA YAS G+K +G SW+
Sbjct: 494 NVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSWI 553
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I YA S D + +A ELF + +P + + +QN KA+ +RKM
Sbjct: 181 LIVAYARSGD-MDSACELF--VGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGV 237
Query: 61 XXXXXXXXXXXXXCVNVAA---LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C + + I+EI R + +GS LI+ Y +CG +
Sbjct: 238 VTDEITLVGAISACAQLGVSGYADWIREI-AESSRFGSGSNVFVGSALIDMYSKCGNVEE 296
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ NVF M++M+ V ++SS+I +A+HG A++A++ F EM G+KP+ +TF+G+ AC
Sbjct: 297 AYNVFKGMKEMN--VFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTAC 354
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SHAG + F M+ YGV ++DHY+C+ D+L RAG L +A ++++ MP++
Sbjct: 355 SHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGV 414
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
WGALLGA G +AEIA R+ E+EP+N NY+LL+K YA
Sbjct: 415 WGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMRE 474
Query: 298 XGVKSTTGSSWV 309
++ G SWV
Sbjct: 475 KQLRKNPGCSWV 486
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 145/280 (51%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +IA N + + L++ M C +++AL K++H
Sbjct: 229 TWNAMIAGYV-DNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQL 287
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ + + LI Y +CG L +S ++F ++ KDVV W+++IS YA HG +
Sbjct: 288 VCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPR--KDVVTWNAMISGYAQHGAGE 345
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
AL F EM+ + +KPD ITF+ VL AC+HAG D YF M +++G++ +HY C+
Sbjct: 346 KALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCM 405
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAGRL EA ++++ MP K +G LLGACR + +AE A + E++P +A
Sbjct: 406 VDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLLELDPTSA 465
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
YV LA +YA+ V G SW+
Sbjct: 466 TGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYSWI 505
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFAD 184
K +V W+++I+ Y +G A+ L+ FK M GVKP+ ++ VL CS G
Sbjct: 225 KTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQV 284
Query: 185 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG- 243
L + + RD S L+ + S+ G L +++++ +P K W A++
Sbjct: 285 HQLVCKSPLSRDTTAVTS------LISMYSKCGDLKDSWDLFVQIPRKDVV-TWNAMISG 337
Query: 244 -ACRNFGELGLAEIAGRASAEVEPE 267
A GE L +E++P+
Sbjct: 338 YAQHGAGEKALHLFDEMKKSEIKPD 362
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 3/286 (1%)
Query: 23 DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
+V +E T++ +I +N +A+ ++RKM C L +
Sbjct: 540 EVKADEITWSVVIGG-CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRM 598
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
KEIH Y R+ D + L++ Y +CG L S NVF M KDV +W+++I A
Sbjct: 599 GKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPI--KDVFSWNTMIFAN 656
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+HG K AL F++M ++ VKPD TF VL ACSH+ ++ + F M RD+ VE
Sbjct: 657 GMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPE 716
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++HY+C+VD+ SRAG L EAY I+ MP++ TA AW A L CR + + LA+I+ +
Sbjct: 717 AEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLF 776
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
E++P +ANYV L + + G+ T G SW
Sbjct: 777 EIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSW 822
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+ + ++RKM C ++ L KEIHG+ +R+ + + S +
Sbjct: 124 QGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFV 183
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +C C+ + VF M +DVV W+SL S Y G + L F+EM + GVKPD
Sbjct: 184 NFYAKCLCVREAQTVFDLMPH--RDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPD 241
Query: 167 GITFLGVLKACS 178
+T +L ACS
Sbjct: 242 PVTVSCILSACS 253
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
K + ++R+M C + L K IHG+ +++ + + + L+
Sbjct: 326 KGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALV 385
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y C C+ + VF M ++VV W+SL S Y G + L F+EM + GVKPD
Sbjct: 386 NLYANCLCVREAQTVFDLMPH--RNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPD 443
Query: 167 GITFLGVLKACS 178
+T L +L ACS
Sbjct: 444 LVTMLSILHACS 455
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
K + ++R+M C ++ L K IHG+ +++ + + + + L+
Sbjct: 225 KGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALV 284
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y C C+ + VF M ++V+ W+SL S Y G + L F+EM + GVKPD
Sbjct: 285 NLYESCLCVREAQAVFDLMPH--RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPD 342
Query: 167 GITFLGVLKACSH 179
+ +L ACS
Sbjct: 343 PMAMSSILPACSQ 355
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 45/236 (19%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
K + ++R+M C ++ L K IHG+ +R+ + + + L+
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALL 486
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGE------------------- 147
Y +C C+ + VF + ++V +W+ +++AY + E
Sbjct: 487 SLYAKCVCVREAQVVFDLIPH--REVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKAD 544
Query: 148 ----------------AKAALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADDALC 188
+ A+E F++M+ G KPD T +L+ACS + + C
Sbjct: 545 EITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHC 604
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
Y R +D+ + + + LVD+ ++ G L + V MP+K +W ++ A
Sbjct: 605 YVFRHWKDWDLART----NALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFA 655
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+K+ H R + +G+ I AYG+C C+ + VF + + +DVV W+SL + Y
Sbjct: 59 VKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDL--VARDVVTWNSLSACY 116
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
G + L F++M + VK + +T +L CS
Sbjct: 117 VNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCS 152
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 14 TALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+A +F LM P +T +N +I+ + F A+ L+ +M
Sbjct: 361 SAETIFKLM---PKTTTVSWNVMISGYVTEGK-LFDALRLFGEMSKSFVEPDAITFTSVL 416
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C +AAL +EIH + ++ + + L++ Y +CG + + VF + + +D
Sbjct: 417 AACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE--RD 474
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+V+W+S+I+AY HG ALE F EM + VKPD +TFL +L ACSHAG DD L +F
Sbjct: 475 LVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFN 534
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP-VKVTAKAWGALLGACRNFGE 250
+M YG+ +HYSCL+ +L RAGRLHEAYE+++ P + + L ACR
Sbjct: 535 QMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKN 594
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
L L + +P++++ Y++L+ MYAS G G+K G SW+
Sbjct: 595 LDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIE 654
Query: 311 YSE 313
+E
Sbjct: 655 INE 657
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 14/271 (5%)
Query: 11 NLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
L A+E+F M PN++ +N +I + DG I L+++M
Sbjct: 257 QLEMAIEVFEQM---PNKTVVAWNSMINGYGFKGDG-ISCIQLFKRMYSEGVKPTLTTLT 312
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C A L K +HGY IRN I P L S L++ Y +CG + ++ +F M
Sbjct: 313 STLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPK- 371
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDAL 187
V+W+ +IS Y G+ AL F EM + V+PD ITF VL ACS A
Sbjct: 372 -TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ ++R+ G + L+D+ ++ G + EA+ V + +P + +W +++ A +
Sbjct: 431 IHNLIVERNLG--NNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLV-SWTSMITAYGS 487
Query: 248 FGEL--GLAEIAGRASAEVEPENAANYVLLA 276
G + L A + V+P+ +L+
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILS 518
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+ +EIH + + + + L++ YG+CG L + VF +M + K VV
Sbjct: 217 CARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPN--KTVV 274
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA-----GFADDALC 188
AW+S+I+ Y G+ + ++ FK M GVKP T L ACS + G
Sbjct: 275 AWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYI 334
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW---------- 238
R+Q D + +S L+D+ + G++ A + + MP K T +W
Sbjct: 335 IRNRIQPDIFLNSS------LMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMISGYVTE 387
Query: 239 GALLGACRNFGEL 251
G L A R FGE+
Sbjct: 388 GKLFDALRLFGEM 400
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH ++ + +GS L+ Y +C + +F +M D KDV W+++IS Y
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD--KDVACWNTVISCYYQS 185
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G+ + AL F M G +PD +T + +C+ D + G S
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS-GFRMDSFV 244
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ LVD+ + G+L A EV MP K T AW +++
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNK-TVVAWNSMI 280
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 14 TALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+A +F LM P +T +N +I+ + F A+ L+ +M
Sbjct: 361 SAETIFKLM---PKTTTVSWNVMISGYVTEGK-LFDALRLFGEMSKSFVEPDAITFTSVL 416
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C +AAL +EIH + ++ + + L++ Y +CG + + VF + + +D
Sbjct: 417 AACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE--RD 474
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+V+W+S+I+AY HG ALE F EM + VKPD +TFL +L ACSHAG DD L +F
Sbjct: 475 LVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFN 534
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP-VKVTAKAWGALLGACRNFGE 250
+M YG+ +HYSCL+ +L RAGRLHEAYE+++ P + + L ACR
Sbjct: 535 QMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKN 594
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
L L + +P++++ Y++L+ MYAS G G+K G SW+
Sbjct: 595 LDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIE 654
Query: 311 YSE 313
+E
Sbjct: 655 INE 657
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 14/271 (5%)
Query: 11 NLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
L A+E+F M PN++ +N +I + DG I L+++M
Sbjct: 257 QLEMAIEVFEQM---PNKTVVAWNSMINGYGFKGDG-ISCIQLFKRMYSEGVKPTLTTLT 312
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C A L K +HGY IRN I P L S L++ Y +CG + ++ +F M
Sbjct: 313 STLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPK- 371
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDAL 187
V+W+ +IS Y G+ AL F EM + V+PD ITF VL ACS A
Sbjct: 372 -TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ ++R+ G + L+D+ ++ G + EA+ V + +P + +W +++ A +
Sbjct: 431 IHNLIVERNLG--NNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLV-SWTSMITAYGS 487
Query: 248 FGEL--GLAEIAGRASAEVEPENAANYVLLA 276
G + L A + V+P+ +L+
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILS 518
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+ +EIH + + + + L++ YG+CG L + VF +M + K VV
Sbjct: 217 CARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPN--KTVV 274
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA-----GFADDALC 188
AW+S+I+ Y G+ + ++ FK M GVKP T L ACS + G
Sbjct: 275 AWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYI 334
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW---------- 238
R+Q D + +S L+D+ + G++ A + + MP K T +W
Sbjct: 335 IRNRIQPDIFLNSS------LMDLYFKCGKVESAETIFKLMP-KTTTVSWNVMISGYVTE 387
Query: 239 GALLGACRNFGEL 251
G L A R FGE+
Sbjct: 388 GKLFDALRLFGEM 400
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH ++ + +GS L+ Y +C + +F +M D KDV W+++IS Y
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD--KDVACWNTVISCYYQS 185
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G+ + AL F M G +PD +T + +C+ D + G S
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS-GFRMDSFV 244
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ LVD+ + G+L A EV MP K T AW +++
Sbjct: 245 SAALVDMYGKCGQLEMAIEVFEQMPNK-TVVAWNSMI 280
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N II+ G +A+AL+ +M C + AL++ IH Y
Sbjct: 359 WNAIISGCVQAKQGK-EALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
R+ + LG+ L++ Y +CG + + VF ++ ++ + W+++I ALHG A+
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQ--RNCLTWTAVICGLALHGNAQD 475
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
AL F +M G+ PD ITFLGVL AC H G ++ YF+ M + V HYSC+V
Sbjct: 476 ALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMV 535
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
D+L RAG L EA E+++ MP+ A GAL ACR +G + + E E++P+++
Sbjct: 536 DLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSG 595
Query: 271 NYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
NYVLLA MY+ GV+ T G S V
Sbjct: 596 NYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLV 634
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 32/242 (13%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +I + + +AI +Y++M C V LNL KE H Y
Sbjct: 226 TWNSMITG-CVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCY 284
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM------------------------ 125
+ ++ L + L++ Y +CG L+ + +F M
Sbjct: 285 IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVA 344
Query: 126 RDM-----DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
R++ +K VV W+++IS + K AL F EM++ ++PD +T + L ACS
Sbjct: 345 REILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQL 404
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D + ++R + + + LVD+ ++ G + A +V +P + W A
Sbjct: 405 GALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTA 462
Query: 241 LL 242
++
Sbjct: 463 VI 464
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L ++ + +G DI H + I CG L + +VF+K R +D+V W+S+I
Sbjct: 178 LGVLGHVLKFGFECDIFVH----NASITMLLSCGELSVAYDVFNKSRV--RDLVTWNSMI 231
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADDALCYFTRMQRD 196
+ G A A++ +KEME V+P+ IT +G++ +CS + CY ++
Sbjct: 232 TGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI----KE 287
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+G+E + + L+D+ + G L A + M K T +W ++ FG L +A
Sbjct: 288 HGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK-TLVSWTTMVLGYARFGFLDVAR 345
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 11 NLPTALELFHLMD--VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
N+ ALE F+ MD V N ++N ++A + R M
Sbjct: 263 NVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLV 322
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C N+ LNL +H Y N+I L + L+ Y +CG + + +VF +M
Sbjct: 323 SVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPV- 381
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
K +V+W+S+I Y LHG ALE F EME AG KP+ TF+ VL ACSHAG +
Sbjct: 382 -KSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWW 440
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
YF M+R Y +E +HY C+VD+L+RAG + + E+I + VK + WGALL CR
Sbjct: 441 YFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCRTH 500
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSW 308
+L LAE + E+EP++ + Y+LL+ +YA+ G G++ SS
Sbjct: 501 LDLELAENVAKRLVELEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASSL 560
Query: 309 V 309
V
Sbjct: 561 V 561
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 156/284 (54%), Gaps = 6/284 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++++YA NL +A +F L+ V + ++ +IA A +A+ L+R+M
Sbjct: 258 LLTMYARC-GNLTSARIIFDLI-VRKSVLSWTSMIAGYAHSRRPK-EALDLFRRMVMTEI 314
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ +L + +EI Y N + Q+ + L+ Y +CG + +
Sbjct: 315 KPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKARE 374
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSH 179
VF ++ + KD+ WSS+I++Y +HG A+ F++M A +KPD I + +L ACSH
Sbjct: 375 VFERVEN--KDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSH 432
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+G +D L YF MQ D+G+ + +HY+CLVD+L+R G+L A + I MP V A+A
Sbjct: 433 SGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAMPTDVQAEALS 492
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL ACR G + L E+ +V P+++++YV +A +Y SVG
Sbjct: 493 PLLSACRIHGNIELGELVAAKLLDVSPKSSSSYVGVANLYNSVG 536
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 45 SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSG 104
S +A+ L+ +M C+ + L +H ++ + +
Sbjct: 198 SVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNL 257
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
L+ Y RCG L ++ +F + + K V++W+S+I+ YA K AL+ F+ M M +K
Sbjct: 258 LLTMYARCGNLTSARIIFDLI--VRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIK 315
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQR---DYGVEASSDHYSCLVDVLSRAGRLHE 221
P+ T VL AC+ G +LC +++ + G E + LV + S+ G +++
Sbjct: 316 PNRATLATVLSACADLG----SLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINK 371
Query: 222 AYEVIRGMPVKVTAKAWGALLGA 244
A EV + K W +++ +
Sbjct: 372 AREVFERVENK-DLTLWSSMINS 393
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ ++ +HG+ R + + L++ Y +C + ++ VF +M + + VV
Sbjct: 20 CANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPE--RSVV 77
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL------ 187
+W+SLISAY + AL KEM + G KP TF+ +L S + + L
Sbjct: 78 SWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSM 137
Query: 188 -CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
C+ ++ E S D+ L+ + ++ G++ EA +V M K T +W ++G
Sbjct: 138 HCFVIKLGL-VCFEVSLDN--SLMGMYAQFGQMDEARKVFDFMDEK-TIVSWTTIMG 190
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 135/233 (57%), Gaps = 2/233 (0%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+++L KEIHG+ IR + + L++ Y RCG + N+ N+F+ ++ +D++ W+
Sbjct: 566 LSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ--RDLILWT 623
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
S+I+A +HG K A++ F +M V PD ITFL +L ACSH+G + +F M+ +
Sbjct: 624 SMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNE 683
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEI 256
Y +E +HY+CLVD+L+R+ L EAY +R MP++ +A+ W ALLGACR L E+
Sbjct: 684 YKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEV 743
Query: 257 AGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A + ++ EN+ NYVL++ +A+ G +K G SW+
Sbjct: 744 AAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWI 796
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 19/221 (8%)
Query: 30 TFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
T+N +I A + G + +AI LY++M C L EIHG
Sbjct: 115 TWNAMIGACVSA--GRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
++ + + LI Y +CG L + +F D V+W+S+ISA+ GE+
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD-YGVEASSDHYS 207
AL F+ M+ GV+ + TF+ L+AC F ++ R + V S+H++
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPT--------FIKIGRGIHAVILKSNHFT 284
Query: 208 ------CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
L+ + + G++ +A V + M K +W LL
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLL 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++ IIA A QN+ A+ L RK+ C + + LIKEIHGY
Sbjct: 420 SWTTIIAGYA-QNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY 478
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ + + + ++ YG + + +VF + KD+V+W+S+I+ +G A
Sbjct: 479 VLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINS--KDIVSWTSMITCCVHNGLAI 535
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--- 206
ALE F + ++PD IT + VL +A AL + + +G +
Sbjct: 536 EALELFNSLIETNIEPDLITLVSVL-------YAAAALSSLKKGKEIHGFLIRKGFFLEG 588
Query: 207 ---SCLVDVLSRAGRLHEAYEVI 226
+ LVD+ +R G + A +
Sbjct: 589 LIANSLVDMYARCGTMENARNIF 611
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+H Y I++ ID + +G+ LI+ YG+C C+ + F M +KD+++W+++I+ YA
Sbjct: 373 EVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP--EKDLISWTTIIAGYAQ 430
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+ AL +++++ + D + +L ACS
Sbjct: 431 NECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 74 CVNVAALNLIKEIHGYGIR--NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + AL +++H + ++ N +D L + + YG+CG ++ VF KM + +
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAVKVFDKMSE--RT 112
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ W+++I A G A+E +KEM + GV D TF VLKAC
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 1 MISLYAHSPDNLPTALELFH--LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
+I++YA D L A LF LM+ + ++N II+A + + S +A++L+R+M
Sbjct: 189 LIAMYAKCGD-LGGARVLFDSGLME-KDDPVSWNSIISAHVGEGE-SLEALSLFRRMQEV 245
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C + + + IH ++++ + + LI Y CG + ++
Sbjct: 246 GVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
VF M + KD V+W++L+S + A+ F++M+ +G KPD ++ L ++ A
Sbjct: 306 ERVFKSM--LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 150/281 (53%), Gaps = 5/281 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA S +N+ A +F M + N +N +I DG+ + + L ++M
Sbjct: 311 LINMYAKS-ENIIDARRVFDEMSIR-NVVAWNTMIVGFGNHGDGN-EVMKLVKEMLREGF 367
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +A+ ++H + ++ + + LI AY +CG + ++
Sbjct: 368 LPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFK 427
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F D+V W+SLI AYA HG A+ + E F++M G+KPD I FLGVL AC+H
Sbjct: 428 CFELTSQ--PDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHC 485
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G L YF M Y + S+HY+CLVD+L R G ++EA+E++R MP++V + GA
Sbjct: 486 GLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGA 545
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+G+C+ + LA++A +EPE + NY +++ ++AS
Sbjct: 546 FIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFAS 586
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 19/235 (8%)
Query: 27 NESTFNPIIAALAAQND-----GSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
N ++N +I A +ND G + +R+M C +
Sbjct: 125 NVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIE 184
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+ ++H + ++ D +G L+ Y +CG + N+ VF + +D+V W+ ++S
Sbjct: 185 MGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSC--RDLVMWNVMVSC 242
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY--FTRMQRDYGV 199
Y + + A F M + V D TF +L S DDAL Y F + +
Sbjct: 243 YVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVIS-----DDALEYYDFGKQVHSLVL 297
Query: 200 EASSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
S D S L+++ +++ + +A V M ++ AW ++ N G+
Sbjct: 298 RQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIR-NVVAWNTMIVGFGNHGD 351
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + +R I LG+ LI Y RCG + S VF +M + ++VV W++LI+ A+H
Sbjct: 204 VHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPE--RNVVTWTALINGLAVH 261
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G ++ AL+ F EM+ +G+KPDG F+GVL ACSH G +D F M+ ++G++ +H
Sbjct: 262 GRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEH 321
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y C+VD+L RAG + EA++ + MP+K + W LLGAC N LGLAE A E++
Sbjct: 322 YGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELD 381
Query: 266 PENAANYVLLAKMYASVG 283
P + +YVLL+ Y VG
Sbjct: 382 PYHDGDYVLLSNAYGRVG 399
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI AYG G L + +F +MR +D+V+WS+LIS + AL F++M+M
Sbjct: 116 NALINAYGSRGSLDVAVKLFDEMRR--RDIVSWSTLISCLVKNNLPAEALSVFQQMQMGH 173
Query: 163 VKP----DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
D L V+ A S G + + + + R G+ + + L+++ SR G
Sbjct: 174 RDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVR-MGIVMTVPLGTALINMYSRCGL 232
Query: 219 LHEAYEVIRGMPVKVTAKAWGALL 242
+ + +V MP + W AL+
Sbjct: 233 IDRSVKVFDEMPER-NVVTWTALI 255
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 165/312 (52%), Gaps = 7/312 (2%)
Query: 1 MISLYAH-SPDNLPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
+I LY+ +P + +++F ++P P+ +N +I+ + D A++ +R+M
Sbjct: 284 LIDLYSKCAPHGMLECMKVFE--EIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRV 341
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP-QLGSGLIEAYGRCGCLVN 117
C N+++ ++ K++H I++DI + + + + Y +CG L +
Sbjct: 342 GFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHD 401
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ +F M + ++ V+ +S+I+ YA HG +L+ F+ M + P+ ITF+ VL AC
Sbjct: 402 ARRIFDTMPE--QNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSAC 459
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+H G D+ YF M+ +G+E ++HYSC++D+L RAG+L++A +I MP +
Sbjct: 460 AHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIE 519
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
W ALLGAC+ G + LA A ++EP NAA YV+L+ +YAS
Sbjct: 520 WAALLGACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRE 579
Query: 298 XGVKSTTGSSWV 309
GVK G SW+
Sbjct: 580 RGVKKKPGCSWI 591
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I A +G+ KA+ L+ +M + L + HG
Sbjct: 210 SWNAMIVACGQHREGA-KALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGK 268
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCG--CLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGE 147
I++ + +GSGLI+ Y +C ++ VF ++ D+V W+++IS ++ H +
Sbjct: 269 MIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIP--KPDLVLWNTMISGFSQHED 326
Query: 148 -AKAALETFKEMEMAGVKPDGITFLGVLKACSH-----AGFADDALCYFTRMQRDYGVEA 201
+ AL +F+EM+ G PD +F+ V+ ACS+ G AL ++ D
Sbjct: 327 LCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALA----IKSDIPCNR 382
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
S + + V + S+ G LH+A + MP + T + G ++ E+
Sbjct: 383 VSVN-NAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEI 431
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 4 LYAHSPDNLPT-ALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXX 61
++A + NLP A +LF ++P P+ ++N +IA A + + +A+++++++
Sbjct: 83 IHACAKHNLPNLAHQLFD--EIPEPDVVSYNTLIAVHARRGECG-QAVSVFKEVREVGLV 139
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
+V + L++++H + + D + + + ++ YGR G L + V
Sbjct: 140 LDGFTLSGVIS--ASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRV 197
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
F +M + +D+V+W+++I A H E AL F EME G++ D T VL A
Sbjct: 198 FREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTA 252
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA-CSHAGFADDAL 187
+ DVV++++LI+ +A GE A+ FKE+ G+ DG T GV+ A G
Sbjct: 104 EPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVEDVGLVRQLH 163
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK-AWGALLGAC- 245
C+ D + +C R GRL+EA+ V R M +W A++ AC
Sbjct: 164 CFALLCGYDCYASVCNAVLACY----GRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACG 219
Query: 246 ---------RNFGEL 251
R FGE+
Sbjct: 220 QHREGAKALRLFGEM 234
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 152/300 (50%), Gaps = 4/300 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
++ ALELF LM P + + QN KA+ L+ +M
Sbjct: 160 DMERALELFWLM--PSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLAS 217
Query: 71 XX-XCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C N+ AL + + + Y +N + + + ++E Y +CG + + VF ++
Sbjct: 218 VLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRF- 276
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+++ +W+S+I A+HG+ A++ + +M G PD +TF+G+L AC+H G +
Sbjct: 277 RNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHV 336
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M RD+ + +HY C+VD+L RAGRL EAYEVI+ MP+K + WG LLGAC G
Sbjct: 337 FQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHG 396
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ LAE+A + +EP N NYV+L+ +YAS G + T G S++
Sbjct: 397 NVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFI 456
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL A L H P +N +I A ++++ + LY +M
Sbjct: 31 NLNYAQVLLH-HSQKPTTFLYNKLIQACSSKH----QCFTLYSQMYLHGHSPNQYTFNFL 85
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMR---- 126
C ++++L+L + IH +++ + L++ Y + GCL + NVF +M
Sbjct: 86 FTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKEL 145
Query: 127 --------------DMD-----------KDVVAWSSLISAYALHGEAKAALETFKEMEM- 160
DM+ ++VV+W++++S Y + + + AL F ME
Sbjct: 146 ATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMERE 205
Query: 161 AGVKPDGITFLGVLKACSHAG 181
V P+ +T VL AC++ G
Sbjct: 206 KDVSPNEVTLASVLPACANLG 226
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 152/284 (53%), Gaps = 7/284 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y D + + +F +D P +N II +LA N + +A+AL+R++
Sbjct: 153 LINMYTACGD-IDASRRVFDKID-EPCVVAYNAIIMSLARNNRAN-EALALFRELQEIGL 209
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + +L+L + +H Y + D + ++ + LI+ Y +CG L ++ N
Sbjct: 210 KPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVN 269
Query: 121 VFSKMRDMDK-DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF RDM K D AWS++I AYA HG+ A+ EM+ V+PD ITFLG+L ACSH
Sbjct: 270 VF---RDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSH 326
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G ++ YF M +YG+ S HY C+VD+L RAGRL EAY+ I +P+K T W
Sbjct: 327 NGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWR 386
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL AC G + + + E++ + +YV+ + + A G
Sbjct: 387 TLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYG 430
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 29/259 (11%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN FN + A ND + I +R+ V AL K+
Sbjct: 90 PNIVLFNTMARGYARLND-PLRMITHFRRCLRLVS---------------KVKALAEGKQ 133
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + ++ + + + LI Y CG + S VF K+ + VVA++++I + A +
Sbjct: 134 LHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKID--EPCVVAYNAIIMSLARN 191
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
A AL F+E++ G+KP +T L VL +C+ G D R +Y + D
Sbjct: 192 NRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLD-----LGRWMHEYVKKYGFDR 246
Query: 206 Y----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRAS 261
Y + L+D+ ++ G L +A V R MP + T +AW A++ A G+ G I+
Sbjct: 247 YVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDT-QAWSAIIVAYATHGD-GFQAISMLNE 304
Query: 262 AEVEPENAANYVLLAKMYA 280
+ E L +YA
Sbjct: 305 MKKEKVQPDEITFLGILYA 323
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KA+A++ +M C + L ++IHG + +D + S LI
Sbjct: 458 KALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALI 517
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG L + N+F ++ + D V W+++IS YA HG + AL+ F++ME + VK +
Sbjct: 518 DMYSKCGNLTEAKNIFERISN--PDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKAN 575
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+T L +L ACSH G +D L F +M+ YGV +HY+C+VD+L R GRL EA I
Sbjct: 576 AVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFI 635
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRA--SAEVEPENAANYVLLAKMYASVGX 284
MP++ W LLGACR G L E A + S + EPE+++ YVLL+ Y G
Sbjct: 636 DKMPIEPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGL 695
Query: 285 XXXXXXXXXXXXXXGVKSTTGSSWV 309
G++ G SW+
Sbjct: 696 LEDGIGLRDVMKERGIRKEPGYSWI 720
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 77 VAALNLIKEIHGYGIRNDIDP-HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ L +KE HG ++ D + + L +AY +C L VF KM KD+V+W
Sbjct: 386 LKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEK--KDIVSW 443
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++++AY E AL F +M G P+ TF V+ AC LC Q+
Sbjct: 444 TTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACG-------GLCLLEYGQQ 496
Query: 196 DYGV--EASSDHYSC----LVDVLSRAGRLHEAYEVIRGM--PVKVTAKAWGALLGACRN 247
+G+ +AS D SC L+D+ S+ G L EA + + P VT W A++
Sbjct: 497 IHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVT---WTAIIST--- 550
Query: 248 FGELGLAEIAGRASAEVE 265
+ + GL E A + ++E
Sbjct: 551 YAQHGLVEDALQLFRKME 568
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 LMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
+ D + F+ + +A+ G ++ A+ L+ M CV + +
Sbjct: 125 VFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDS 184
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+ + +H + H +G+ L+ Y + G S NVF+ M D++ V+W+++I
Sbjct: 185 VVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVND--VSWNAMI 242
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY-FTRMQRDYG 198
S + +G A + M GV P+ TFL + KA G D C+ R ++G
Sbjct: 243 SGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLG--DINRCHEVHRYAYEWG 300
Query: 199 VEASSDHYSCLVDVLSRAGRLHEA 222
+++++ + L+++ S+ G L +A
Sbjct: 301 LDSNTSVGTALINMYSKCGVLCDA 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVF-SKMRDMDKDVVAWSSL 138
+N E+H Y +D + +G+ LI Y +CG L ++ +F SK + + W+++
Sbjct: 286 INRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVN-APWNAM 344
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
I+ Y+ G ALE F M VKPD TF V +
Sbjct: 345 ITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNS 382
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A ELF M NE T+ +IA + Q +A+ L+ +M
Sbjct: 195 LDRARELFDEMP-QRNEVTWGTMIAGYS-QAKLCREAVELFNEMIGLEFIPDNIALVSVL 252
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + L + +H Y RN I L +GL++ Y +CGC+ + F +KD
Sbjct: 253 SACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESC--TNKD 310
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V W++++ +A+HG+ LE F M G+KPDG+TFLGVL CSHAG +A F
Sbjct: 311 VFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFD 370
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ YGV HY C+ D+L+RAG + E+ E+I+GMP AWG LLG CR G +
Sbjct: 371 EMETVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNV 430
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+A+ A + E++PE+ Y ++A +YA+
Sbjct: 431 EIAKQAAQQVMEIKPEDGGVYSVMANIYAN 460
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 149/280 (53%), Gaps = 5/280 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ YA+ + ALE F+ M N ++N II Q +A+ L+ +M
Sbjct: 307 MINAYANH-GLIDCALEFFNQMP-GKNVVSWNSIIWC-HVQEGLYAEAVDLFYRMCDSGV 363
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++ L L K+ H Y N+I L + +I+ Y +CG L + +
Sbjct: 364 MANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMD 423
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF M + K+ V+W+ +I A ALHG K A+E F++M+ +GV PD ITF G+L ACSH+
Sbjct: 424 VFFGMPE--KNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHS 481
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D YF M +G+ +HY+C+VD+L R G L EA +I+ MPVK W A
Sbjct: 482 GLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSA 541
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
LLGACR +G L + + + E+ N+ YVLL+ MY+
Sbjct: 542 LLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYS 581
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 7/230 (3%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN+ FN +I + +D K++ LYR+M C + L
Sbjct: 97 PNKFMFNHLIKGYSNSSD-PIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVC 155
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + + H + + ++ Y CG + ++ VF + + + +V+W+S+I+ Y+
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISE--RTLVSWNSMINGYSKM 213
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY-GVEASSD 204
G ++ A+ F+EM+ G++PD T +G+L + G D L F + G+E S
Sbjct: 214 GRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFD--LGRFVHLHMVVTGIEIDSI 271
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+ L+D+ ++ G L A V M K +W ++ A N G + A
Sbjct: 272 VTNALMDMYAKCGNLKCAKSVFDQMLDK-DVVSWTCMINAYANHGLIDCA 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 41/199 (20%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+L + +H + + I+ + + L++ Y +CG L + +VF +M +DKDVV+W+ +I
Sbjct: 251 FDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM--LDKDVVSWTCMI 308
Query: 140 SAYALHGEAKAALETFKEME-------------------------------MAGVKPDGI 168
+AYA HG ALE F +M +GV +
Sbjct: 309 NAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDT 368
Query: 169 TFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
T + +L +CSH G A Y D + S+ + ++D+ ++ G L A +V
Sbjct: 369 TLVAILSSCSHMGDLALGKQAHSYIF----DNNITLSATLCNAIIDMYAKCGALQTAMDV 424
Query: 226 IRGMPVKVTAKAWGALLGA 244
GMP K A +W ++GA
Sbjct: 425 FFGMPEK-NAVSWNVIIGA 442
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 6/238 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM--DKD 131
C +AAL+ +EIHG+ +R + L++ Y +CG LV + +F DM KD
Sbjct: 507 CAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF----DMIPKKD 562
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+++W+ +I+ Y +HG A+ TF EM +AG++PD +F +L ACSH+G ++ +F
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN 622
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ + GVE +HY+C+VD+L+R G L +AY+ I MP+K WG LL CR ++
Sbjct: 623 SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDV 682
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE E+EP+N YV+LA +YA G K G SW+
Sbjct: 683 KLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 740
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L+L + +HG+G++ + L++ Y +CG L + VF KM D +V
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD--TTIV 363
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I+AY G A+ F EM+ GV+PD T ++ AC+ + D + +
Sbjct: 364 SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 423
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
++ G+ ++ + L+++ ++ G + EA V +PVK +W ++G
Sbjct: 424 IKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIV-SWNTMIG 471
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
NL A E+F M ++ IIAA + S AI L+ +M
Sbjct: 346 NLNGATEVFVKMG-DTTIVSWTSIIAAYVREGLYS-DAIGLFDEMQSKGVRPDIYTVTSI 403
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C ++L+ +++H Y I+N + + + + LI Y +CG + + VFSK+ K
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV--K 461
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-CY 189
D+V+W+++I Y+ + ALE F +M+ KPD IT VL AC+ D +
Sbjct: 462 DIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIH 520
Query: 190 FTRMQRDYGVEASSDHYSC-LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--ACR 246
++R Y S H +C LVD+ ++ G L A + +P K +W ++
Sbjct: 521 GHILRRGY---FSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMH 576
Query: 247 NFGELGLAEIAGRASAEVEPENAANYVLL 275
FG ++ A +EP+ ++ +L
Sbjct: 577 GFGNEAISTFNEMRIAGIEPDESSFSAIL 605
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 78 AALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
AAL +KE +HGY ++ + + + LI AY + G + ++ N+F ++ + DVV+
Sbjct: 206 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE--PDVVS 263
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S+I+ ++G + LE F +M + GV+ D T + VL AC++ G R
Sbjct: 264 WNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLS-----LGRAL 318
Query: 195 RDYGVEASSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+GV+A + L+D+ S+ G L+ A EV M T +W +++ A
Sbjct: 319 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +L K +H I N I LG+ L+ Y CG LV +F K+ M+ V
Sbjct: 104 CAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKVF 161
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
W+ L+S YA G + ++ FK+M+ GV + TF VLK
Sbjct: 162 LWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK 203
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 4/281 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +I A QN +A+ L+ M +++ K IHG
Sbjct: 405 TWNAMILGYA-QNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGL 463
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
IR ++D + + + L++ Y +CG + + +F M++ + V+ W+++I Y HG K
Sbjct: 464 AIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQE--RHVITWNAMIDGYGTHGLGK 521
Query: 150 AALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
AAL+ F +M+ A +KP+ ITFL V+ ACSH+GF ++ L YF M+ YG+E S DHY
Sbjct: 522 AALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGA 581
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L RAG+L +A++ I MP+K GA+LGAC+ + L E A E++P+
Sbjct: 582 MVDLLGRAGKLDDAWKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFELDPDE 641
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
Y+L+A MYAS G+ T G S V
Sbjct: 642 GGYYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPGCSLV 682
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N ++A A QN + KA+ L M +V L + + +HGY
Sbjct: 204 WNTVVAGYA-QNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYA 262
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
+R D + + L++ Y +CG + VF +M K+VV+W+++I A +GE++
Sbjct: 263 VRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSS--KNVVSWNTVIDGLAQNGESEE 320
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
A TF +M V+P ++ +G L ACS+ G + + R+ + ++ + L+
Sbjct: 321 AFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGK-FVHRLLDQMKLSSNVSVMNSLI 379
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGAL-LGACRN 247
+ S+ R+ A V + K T W A+ LG +N
Sbjct: 380 SMYSKCKRVDIAASVFDNLEGK-TNVTWNAMILGYAQN 416
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+HG I+N + + + ++ Y +C + ++ +F +M + +D+V W+++++ YA
Sbjct: 156 EVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPE--RDLVCWNTVVAGYAQ 213
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEA 201
+G A+ AL+ +M+ G K D IT + VL A + Y R+ D V
Sbjct: 214 NGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNV 273
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL--GLAEIAGR 259
S + L+D+ + G + V + M K +W ++ GE A
Sbjct: 274 S----TALLDMYFKCGEVETGRLVFQRMSSK-NVVSWNTVIDGLAQNGESEEAFATFLKM 328
Query: 260 ASAEVEPENAA 270
+VEP N +
Sbjct: 329 FEEKVEPTNVS 339
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +AAL+ +EIHG+ +R + L++ Y +CG LV + +F + KD++
Sbjct: 782 CAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPK--KDLI 839
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+ +I+ Y +HG A+ TF EM +AG++PD +F +L ACSH+G ++ +F M
Sbjct: 840 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSM 899
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ + GVE +HY+C+VD+L+R G L +AY+ I MP+K WG LL CR ++ L
Sbjct: 900 RNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKL 959
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE E+EP+N YV+LA +YA G K G SW+
Sbjct: 960 AEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 1015
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+ L+L + +HG+G++ + L++ Y +CG L + VF KM D +V+W
Sbjct: 583 NIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTT--IVSW 640
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S I+AY G A+ F EM+ GV+PD T ++ AC+ + D + + +
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ G+ ++ + L+++ ++ G + EA V +PVK +W ++G
Sbjct: 701 N-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIV-SWNTMIGG 747
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 17/271 (6%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQ-NDGSFK-AIALYRKMXXXXXXXXXXXXX 68
NL A E+F V ++T + +AA +G + AI L+ +M
Sbjct: 621 NLNGATEVF----VKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 676
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C ++L+ +++H Y I+N + + + + LI Y +CG + + VFSK+
Sbjct: 677 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP-- 734
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL- 187
KD+V+W+++I Y+ + ALE F +M+ KPD IT VL AC+ D
Sbjct: 735 VKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGRE 793
Query: 188 CYFTRMQRDYGVEASSDHYSC-LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--A 244
+ ++R Y S H +C LVD+ ++ G L A + +P K +W ++
Sbjct: 794 IHGHILRRGY---FSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYG 849
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLL 275
FG ++ A +EP+ ++ V+L
Sbjct: 850 MHGFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 78 AALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
AAL +KE +HGY ++ + + + LI AY + G + ++ N+F ++ + DVV+
Sbjct: 481 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE--PDVVS 538
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S+I+ ++G + LE F +M + GV+ D T + VL A ++ G R
Sbjct: 539 WNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS-----LGRAL 593
Query: 195 RDYGVEASSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+GV+A + L+D+ S+ G L+ A EV M T +W + + A
Sbjct: 594 HGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTIAA 646
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +L K +H I N I LG+ L+ Y CG LV +F K+ M+ V
Sbjct: 379 CAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKVF 436
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
W+ L+S YA G + ++ FK+M+ GV + TF VLK
Sbjct: 437 LWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLK 478
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 1/275 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QND S +A+ LYR+M C +++L +EIH D
Sbjct: 623 TQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDE 682
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
S L++ Y +CG + ++ VF ++ + KDV++W+S+I +A +G A+ AL+ F EM
Sbjct: 683 LTSSALVDMYAKCGDVKSAAKVFEEL-PIKKDVISWNSMIVGFAKNGYAERALKVFDEMT 741
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
++ V PD +TFLGVL ACSHAG + F M Y + DH++C+VD+L R G L
Sbjct: 742 LSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFL 801
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA E I + V+ A W LLGAC G+ A E+EP+N++ YVLL M+
Sbjct: 802 EEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEPQNSSPYVLLYNMH 861
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSES 314
A G V+ T G SW+V ++
Sbjct: 862 AGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVVDKT 896
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXX 70
L A ELF MD N +N +I+ + G K A+ YRKM
Sbjct: 191 LDHACELFDEMDGCGNVVAWNVMISGHGKR--GYHKEAVEFYRKMRMNGVISSRSTLASV 248
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
+ L +HG ++ + + S LI YG+C L ++ VF + D+
Sbjct: 249 LSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVV--CDR 306
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD-DALCY 189
+VV W++++ YA +G +E F EM G PD T+ +L +C+ F D +
Sbjct: 307 NVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLH 366
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
T +++ + + + LVD+ ++AG L EA + M + +W A+L
Sbjct: 367 STIIKKRFTDNLCVN--NALVDMYAKAGALKEARKQFERMKYRDNI-SWNAIL 416
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA + L A + F M N S +N I+ Q + +A ++R+M
Sbjct: 384 LVDMYAKAG-ALKEARKQFERMKYRDNIS-WNAILVGYV-QEEEETEAFNMFRRMNRHGV 440
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C N+ L + HG ++ +D + GS LI+ Y +CG + ++
Sbjct: 441 VPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARK 500
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
++S M + VV+ ++LI+ YA+ + K A+ EM++ G+KP ITF ++ C +
Sbjct: 501 IYSCMPEWS--VVSMNALIAGYAIK-DTKEAINLLHEMQILGLKPSEITFASLIDCCKES 557
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 17/249 (6%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
+ N +IA A ++ + +AI L +M C + L +IH
Sbjct: 512 SMNALIAGYAIKD--TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCA 569
Query: 90 GIRNDIDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
++N + + LG+ L+ Y L +FS++ ++ K +V W++LIS + + +
Sbjct: 570 ILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNL-KSIVLWTALISGHTQNDCS 628
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD-----ALCYFTRMQRDYGVEASS 203
AL ++EM + PD TF+ VL+AC+ D +L + T D E +S
Sbjct: 629 DQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLD---ELTS 685
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRN-FGELGLAEIAGRAS 261
S LVD+ ++ G + A +V +P+K +W +++ G +N + E L
Sbjct: 686 ---SALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTL 742
Query: 262 AEVEPENAA 270
+ V P++
Sbjct: 743 SSVSPDDVT 751
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
I + AQN + L+ +M C L++ +++H I+
Sbjct: 314 ILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKR 373
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ + + L++ Y + G L + F +M+ +D ++W++++ Y E A
Sbjct: 374 FTDNLCVNNALVDMYAKAGALKEARKQFERMKY--RDNISWNAILVGYVQEEEETEAFNM 431
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+ M GV PD + +L AC + + L F + G++ + S L+D+ S
Sbjct: 432 FRRMNRHGVVPDEVCMASILSACGNIKVLEAGL-QFHGLSVKLGLDTNLFAGSSLIDMYS 490
Query: 215 RAGRLHEAYEVIRGMP 230
+ G + +A ++ MP
Sbjct: 491 KCGGIEDARKIYSCMP 506
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-DV 132
C + L +H I+N + L LI Y +C CL ++ +F+ + +D D
Sbjct: 82 CTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVSRLDNLDT 141
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
+++LI Y G AL+ F EM+ +G D + + VL AC + G D A F
Sbjct: 142 ATFTALIGGYVRVGMFDDALQLFDEMQ-SGFVLDELVIVTVLNACVNLGKLDHACELFDE 200
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
M V A ++ ++ + G EA E R M
Sbjct: 201 MDGCGNVVA----WNVMISGHGKRGYHKEAVEFYRKM 233
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
N+ A +F + VP N ST ++A A QN + +AI +Y KM
Sbjct: 258 NVSEARRIFDEIPVPLNPSTCAALLACYA-QNGHAREAIEMYEKMRRAKIKVTDVAMVGA 316
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGS-GLIEAYGRCGCLVNSCNVFSKMRDMD 129
C + + + + Y I + S LI +CG + + F+ MR+
Sbjct: 317 ISACAQLRDIRM-SNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRN-- 373
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+D+ +S++I+A+A HG+++ A++ F +M+ G+ P+ +TF+GVL ACS +G ++ +
Sbjct: 374 RDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRF 433
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M YG+E +HY+C+VD+L RAG+L +AY +I+ A WG+LL ACR +G
Sbjct: 434 FQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYG 493
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ L EIA R E++P ++ NYVLLA YAS G+K +G SW+
Sbjct: 494 NVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWI 553
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 153/281 (54%), Gaps = 4/281 (1%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
+T+N ++ + A+ND +A+ L+ K+ C +A+++L+++ HG
Sbjct: 558 TTWN-LMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHG 616
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
Y IR+ + L L++AY +CG + + +F +DKD+V ++++I YA+HG +
Sbjct: 617 YIIRSSFED-LHLKGTLLDAYAKCGIIGYAYKIFQS--SVDKDLVMFTAMIGGYAMHGMS 673
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
+ ALETF M G+KPD + F +L ACSHAG + L F +++ +G++ + + ++C
Sbjct: 674 EKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFAC 733
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L+R G + EAY + +P++ A WG LLGAC+ + E+ L I ++E +
Sbjct: 734 VVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEAND 793
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
NY++L+ +YA+ +K G SW+
Sbjct: 794 IGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWI 834
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM-DKDV 132
C LN K +HGY I++ + G+ L+ Y +CG + +C+ ++ + KDV
Sbjct: 156 CARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLV--ACDAYAVFDSIIHKDV 213
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
V+W+++I+ A +G K A F M VKP+ T +L C A F ++ R
Sbjct: 214 VSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC--ASFDENIAHRCGR 271
Query: 193 MQRDYGV---EASSDHYSC--LVDVLSRAGRLHEAYEVIRGMPVK 232
Y + E S+D C L+ + GR EA + M +
Sbjct: 272 QIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDAR 316
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQL------GSGLIEAYGRCGCLVNSCNVFSKMRD 127
C + L K++H Y +R HP L G+ L+ Y +CG + + + FS +
Sbjct: 364 CAQLDNLQAGKQVHAYILR-----HPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISR 418
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
KD+++W+S++ A+ L M ++PD +T L ++ C+ +L
Sbjct: 419 --KDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCA-------SL 469
Query: 188 CYFTRMQRDYGVEASSDHYSC---------LVDVLSRAGRLHEAYEVIRGMPVK 232
+++ +G S C ++D S+ G + A ++ + + K
Sbjct: 470 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEK 523
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 130/214 (60%), Gaps = 7/214 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQ---LGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + +L+ +++H + +R+ ++ + + + L++ Y +CG + + FS M+ K
Sbjct: 226 CGAIGSLDFGRKVHSF-VRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKR--K 282
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKACSHAGFADDALCY 189
+VV+W+ +I +A HG + AL F M V +PD ITFL VL ACSH G D+ Y
Sbjct: 283 NVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRY 342
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
F M RDY ++ + HY C+VD+L RAG EAYE+I+ MPV+ A W LL ACRN+G
Sbjct: 343 FEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYG 402
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ L E + E+EP+++++YVLLA MYAS G
Sbjct: 403 NVELGEKVRKHLMELEPDHSSDYVLLANMYASTG 436
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 146/283 (51%), Gaps = 3/283 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T++ I+A QN A+ L+R C +A L K++
Sbjct: 222 NAVTWSSILAGYV-QNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQV 280
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H ++ + + S LI+ Y +CGC+ + VF + + +V W+++IS + H
Sbjct: 281 HAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQG--EELRSIVLWNAMISGFGRHA 338
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
A A+ F++M+ G+ PD +T++ VL ACSH G + YF M R++ + S HY
Sbjct: 339 CALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLHY 398
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
SC+VD+L RAG +H+AY++I MP T+ WG+LL +CR G + AEIA + E+EP
Sbjct: 399 SCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGNIEFAEIAAKHLFEMEP 458
Query: 267 ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+NA N+VLLA +YA+ +K G+SW+
Sbjct: 459 DNAGNHVLLANIYAANKKWEEVAKTRKLLRDSELKKDRGTSWI 501
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H + I+ +D + +G+ L+ Y +C + ++ +F M + + V WSS+++ Y
Sbjct: 178 QLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMP--ETNAVTWSSILAGYVQ 235
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA---DDALCYFTRMQRDYGVEA 201
+G +AAL F++ ++ G + D FL C+ AG A + + + +G
Sbjct: 236 NGLHEAALLLFRDYQLMGFEQDA--FLISSAVCACAGLATLIEGKQVHAISCKSGFG--- 290
Query: 202 SSDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
S+ Y S L+D+ ++ G + EAY V +G ++ + W A++
Sbjct: 291 -SNIYVTSSLIDMYAKCGCIREAYIVFQGEELR-SIVLWNAMIS 332
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 155/286 (54%), Gaps = 6/286 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
+++T+N IIA QN + KAI L ++M C ++ ++ L +++
Sbjct: 492 DQATWNAIIAGYT-QNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQL 550
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
HG+ IR ++ + +G+ L + Y +CG + + NVF +R +K+ V +++++ Y HG
Sbjct: 551 HGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVF--LRTPEKNSVTYTTMMMCYGQHG 608
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
K AL + M +G++PD +TF+ +L AC+++G D+ L F M++ + ++ S +HY
Sbjct: 609 MGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHY 668
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKV-TAKAWGALLGACRNFG--ELGLAEIAGRASAE 263
C+ D+L R GR+ EAYE ++G+ T + WG+LLG+CRN G ELG A +
Sbjct: 669 CCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMG 728
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ A +VLL+ +YA G G+ TG SWV
Sbjct: 729 MDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWV 774
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 10 DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
+++ T+L++F M + + ++N II+A QN +A+ L +M
Sbjct: 374 NHVDTSLKVFDKM-LERDAVSWNTIISAFV-QNGFDEEALMLVCEMQKQKFLIDSVTATA 431
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
N+ L + K+ H Y IR I + S LI+ Y + G + + +F + D
Sbjct: 432 LLSAASNLRNLYVGKQTHAYLIRRGIQ-FEGMESYLIDMYAKSGSIRTAELLFEQNCSSD 490
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
+D W+++I+ Y +G + A+ K+M + V P+ +T +L ACS G
Sbjct: 491 RDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 150/272 (55%), Gaps = 8/272 (2%)
Query: 11 NLPTALELFHLMDVPPNES-TFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXX 68
NL A +LF D+P + ++ +I++ + G F KA+ L+++M
Sbjct: 258 NLVAARKLFD--DMPHRDVISWTSMISSYSQA--GQFGKAVRLFQEMMVTKVKPDEITVA 313
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C ++ AL++ + +H Y + D++ +G+ LI+ Y +CG + +VF +M
Sbjct: 314 SVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGK- 372
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
+D V+W+S+I+ A++G A +AL F M GV+P TF+GVL AC+HAG D L
Sbjct: 373 -RDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLE 431
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
YF M+R YG+ HY C+VD+LSR+G L AYE I+ MP+ W LL A +
Sbjct: 432 YFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVH 491
Query: 249 GELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
G L LAEIA + E +P N+ NY+L + YA
Sbjct: 492 GNLHLAEIATKKLLETDPSNSGNYILSSNTYA 523
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ YA SP N+ A ELF +P P S +N +I + Q + +AI Y M
Sbjct: 16 LLKSYALSPTNILKANELFR--QIPRPTLSHWNIMIRGWS-QTNQPIEAIRNYNLMYSQA 72
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++ ++ +H ++ D + + LI Y L +
Sbjct: 73 LFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGFAR 131
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF +M + +D+V+W+SLI Y L F+EM MA VK D +T + V+ AC+
Sbjct: 132 KVFDEMSE--RDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTV 189
Query: 180 AG 181
G
Sbjct: 190 LG 191
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +I A QN +A+ L+ M +++ + K IHG
Sbjct: 388 TWNAMILGYA-QNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGL 446
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
IR +D + + LI+ Y +CG + +F M + + V+ W+++I Y HG K
Sbjct: 447 AIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHE--RHVITWNAMIDGYGTHGLGK 504
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
A++ F M+ V P+ TFL V+ ACSH+GF ++ L +F M+ DYG+E S DHYS +
Sbjct: 505 EAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAV 564
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAG+LH A+ +I MP+K GA+LGAC+ + L E A E++P+
Sbjct: 565 VDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAADKLFELDPDEG 624
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+VLLA MY S G+ T G S+V
Sbjct: 625 GYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFV 664
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
A+N A+ Y +M C L +EIHG I N +
Sbjct: 94 AKNSSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDL 153
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
G++ Y +CG + ++ VF ++ + KD+V+W+SLI+ YA +G K AL+ F M+
Sbjct: 154 FSMIGVMGFYVKCGEIDDAFKVFERLSE--KDLVSWTSLIAGYAQNGYPKRALDLFYRMQ 211
Query: 160 MAGVKPDGITFLGVLKA 176
AG+K D +T + +L A
Sbjct: 212 EAGLKADSVTLVSILPA 228
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN +A+ L+ +M ++ L + K IHGY +R +
Sbjct: 195 AQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKV 254
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + L+ Y CGC + VF M ++K V+W+++I YA G+++ A TF +M
Sbjct: 255 SVINALLYMYFECGCERIARLVFEGM--INKCAVSWNTMIDGYAQIGKSEEAFATFLKML 312
Query: 160 MAGVKPDGITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
GV+P + + L AC+ G + +Q+ E + L+ + S+ R
Sbjct: 313 DEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPV--MNSLLSMYSKCKR 370
Query: 219 LHEAYEVIRGMPVKVTAKAWGAL-LGACRN 247
+ A + + K T W A+ LG +N
Sbjct: 371 VDLAASIFENLK-KKTNVTWNAMILGYAQN 399
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 6/298 (2%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A+ +F M V + +N IIAA A +DG +A+ALY+ M
Sbjct: 233 LLEAVGVFREM-VTGDSVVWNSIIAAFAQHSDGD-EALALYKSMRREGFPADQSTLTSVL 290
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + L L +++H + ++ D D L + L++ Y +CG L ++ +FS+M KD
Sbjct: 291 RACTGSSLLELGRQVHVHVLKFDQDL--ILNNALLDMYCKCGSLEDAKFIFSRM--AVKD 346
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V++WS++IS A +G + AL F M+++G +P+ IT LGVL ACSHAG ++ YF
Sbjct: 347 VISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFR 406
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ YG++ +HYSCL+D+L RAG+L E ++I M + W LL ACR +
Sbjct: 407 SMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNV 466
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LA A + +++ ++A YVLL+ +YA+ G++ G SW+
Sbjct: 467 DLATYAAKEILKLDQQDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWI 524
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+ A+ K +H + N P L + L+ Y + L + VF KM + ++VV
Sbjct: 94 CLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPE--RNVV 151
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++ISAY+ A++ M GV P+ TF VL+AC + LC ++
Sbjct: 152 SWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRAC-------ERLCDLKQV 204
Query: 194 QR---DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
G+E+ S L+D S+ G L EA V R M V + W +++ A
Sbjct: 205 HSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREM-VTGDSVVWNSIIAA 257
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+K++H ++ ++ + S LI+AY + G L+ + VF +M + D V W+S+I+A+
Sbjct: 201 LKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREM--VTGDSVVWNSIIAAF 258
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
A H + AL +K M G D T VL+AC+ + +L R + ++
Sbjct: 259 AQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGS-----SLLELGRQVHVHVLKFD 313
Query: 203 SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
D + L+D+ + G L +A + M VK +W ++
Sbjct: 314 QDLILNNALLDMYCKCGSLEDAKFIFSRMAVK-DVISWSTMIS 355
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL++ K +H Y + +G+ LI+ Y +CG + N+ VF+ + KD++
Sbjct: 315 CSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDR--KDII 372
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++I+ A+HG A AL F M+ G +PDG+TF+G+L AC+H G D YF M
Sbjct: 373 SWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSM 432
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y + +HY C+VD+L RAG L +A IR MP++ A W ALLGACR + + +
Sbjct: 433 VDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEI 492
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
AE+A + E+EP N AN+V+++ +Y +G G + G S
Sbjct: 493 AELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCS 546
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 152/281 (54%), Gaps = 4/281 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXX-XXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N +IA + AQN S +A +L+ M C + AL + K IH
Sbjct: 266 SWNSLIA-VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHD 324
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
++ +++ + +G+ +++ Y +CG + + F +++ K+V +W+ +++ Y +HG
Sbjct: 325 QVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKR--KNVKSWTVMVAGYGMHGHG 382
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
K A++ F EM G+KP+ ITF+ VL ACSHAG + +F +M+ ++ VE +HYSC
Sbjct: 383 KEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSC 442
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L RAG L EAY +I+ M VK WG+LLGACR + L EI+ R +++P N
Sbjct: 443 MVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSN 502
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
YVLL+ +YA G G+ T G S V
Sbjct: 503 CGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIV 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V ++ + +HG ++ + +G+ L++AY +CG + S VF M + DV
Sbjct: 208 CARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME--ETDVC 265
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTR 192
+W+SLI+ YA +G + A F +M G V+ + +T VL AC+H+G C +
Sbjct: 266 SWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQ 325
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + +E + + +VD+ + GR+ A + + K K+W ++
Sbjct: 326 VVK-MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRK-NVKSWTVMV 373
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 152/281 (54%), Gaps = 4/281 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXX-XXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N +IA + AQN S +A +L+ M C + AL + K IH
Sbjct: 266 SWNSLIA-VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHD 324
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
++ +++ + +G+ +++ Y +CG + + F +++ K+V +W+ +++ Y +HG
Sbjct: 325 QVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKR--KNVKSWTVMVAGYGMHGHG 382
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
K A++ F EM G+KP+ ITF+ VL ACSHAG + +F +M+ ++ VE +HYSC
Sbjct: 383 KEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSC 442
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L RAG L EAY +I+ M VK WG+LLGACR + L EI+ R +++P N
Sbjct: 443 MVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSN 502
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
YVLL+ +YA G G+ T G S V
Sbjct: 503 CGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIV 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V ++ + +HG ++ + +G+ L++AY +CG + S VF M + DV
Sbjct: 208 CARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME--ETDVC 265
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFTR 192
+W+SLI+ YA +G + A F +M G V+ + +T VL AC+H+G C +
Sbjct: 266 SWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQ 325
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ + +E + + +VD+ + GR+ A + + K K+W ++
Sbjct: 326 VVK-MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRK-NVKSWTVMV 373
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 151/284 (53%), Gaps = 5/284 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
++ ++N +I + Q S +++ L+ +M C +++++ KEI
Sbjct: 503 DKVSYNILIIGYS-QTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEI 561
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
HG+ +R H + L++ Y +CG + + VF +++ KDV +W+++I Y + G
Sbjct: 562 HGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQH--KDVASWNTMILGYGMRG 619
Query: 147 EAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
E + A+ F+ M E GV+ D ++++ VL ACSH G + YF +MQ DY +E + H
Sbjct: 620 EFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQ-DYNIEPTHTH 678
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+L RAG++ EA +IRG+ + A WGALLGACR +G + L A +++
Sbjct: 679 YACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLK 738
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P++ Y+LL+ MYA G G K G SWV
Sbjct: 739 PDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCSWV 782
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +YA S + A +F+ M N ++N ++A A QN F A+ L R+M
Sbjct: 379 LIDMYAKSGSS-RVASTIFNKMG-DRNIVSWNSMVANFA-QNRHHFAAVELLRQMQAHGE 435
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + LN+ KEIH I+ L + L + Y +CG L + N
Sbjct: 436 NPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARN 495
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF+ KD V+++ LI Y+ + +L F EM ++G+ PD ++F+G++ AC+H
Sbjct: 496 VFNVSI---KDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAH 551
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 17 ELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
++F MD NE ++N +I + + S A+ +R M
Sbjct: 293 KVFDEMD-ERNEVSWNAVITGFSFRGL-SMDALDAFRSMINTGMRPNPVTISSMLPVLGE 350
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ L E+HGY +R I+ +G+ LI+ Y + G + +F+KM D +++V+W+
Sbjct: 351 LGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGD--RNIVSWN 408
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
S+++ +A + AA+E ++M+ G P+ +TF VL AC+ GF + R+ +
Sbjct: 409 SMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQT 468
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
G + L D+ S+ G L A V
Sbjct: 469 -GCATDLFLSNALTDMYSKCGHLSLARNVF 497
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 14 TALELFHLMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
T+L LF +P +++ F N +I A + G F +Y M
Sbjct: 85 TSLILFQ-NTLPFSKTAFLWNTLIRAYSIA--GFFDGFGVYNTMVRSGVKPDDHTYPFVL 141
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + + +E+HG + D +G+ L+ YG CG V++ NVF +M + DK
Sbjct: 142 KACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDK- 200
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGITFLGVLKACSHAGFADDALCY 189
V+W+++I + G + +L FKEM +A V+PD +T + VL C AD
Sbjct: 201 -VSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVC-----ADSENVV 254
Query: 190 FTRMQRDY----GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
R+ Y G+ + LVDV + G +V M + +W A++
Sbjct: 255 MARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDER-NEVSWNAVI 310
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPP--NESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
M++ YA D L +A F D P N ++ +IA + QN+ +++ L+ +M
Sbjct: 267 MVNGYAKCGD-LESARRFF---DQTPRKNAVCWSAMIAGYS-QNNKPKESLKLFHEMMER 321
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDP-HPQLGSGLIEAYGRCGCLVN 117
C + LNL IH Y + I P L + +++ Y +CG +
Sbjct: 322 GVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDA 381
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ VFS M + +++++W+++I+ YA +G AK A+ F +M G +P+ ITF+ +L AC
Sbjct: 382 ATEVFSTMPE--RNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTAC 439
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SH G + YF M+R YG++ HY+C+VD+L R G L EAY++I MP++ A
Sbjct: 440 SHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAA 499
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
WGALL ACR G + LA ++ ++PE++ YVLLA A+
Sbjct: 500 WGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKD 559
Query: 298 XGVKSTTGSSWV 309
GVK G S +
Sbjct: 560 KGVKKIPGYSLI 571
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+GLI Y G L N+ VF + DKDVV W+++I YA H ++ A+E F+ M ++
Sbjct: 133 NGLIHFYAERGLLKNARQVFDE--SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSH 190
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V+P+ +T + V+ ACS G + +++ + + S ++ L+D+ + L +A
Sbjct: 191 VEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE-EKNMRCSLSLHNALLDMYVKCDCLVDA 249
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
E+ M K +W +++ G+L E A R + +NA
Sbjct: 250 RELFDRMATK-DVYSWTSMVNGYAKCGDL---ESARRFFDQTPRKNA 292
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 126/205 (61%), Gaps = 3/205 (1%)
Query: 80 LNLIKEIHGYGIRNDIDPHP-QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L L + + Y N ID + S L++ +CG + + +F +M + +D+V++ S+
Sbjct: 325 LKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPE--RDLVSYCSM 382
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
I +++HG + A+ F M M G+ PD F VL ACSH+G D YF M+ +YG
Sbjct: 383 IHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYG 442
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
+ + DH++C+VD+L R+G+L +AYE+I+ M ++ A AWGAL+GAC+ G+ L EI
Sbjct: 443 ISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQGDTELGEIVA 502
Query: 259 RASAEVEPENAANYVLLAKMYASVG 283
E+EP+NAANYVLL+ +YA+ G
Sbjct: 503 NRLFELEPQNAANYVLLSNIYAAAG 527
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +++ Y + G + +S +F + +KDVV WS+LIS Y +GEA AL+ F EME
Sbjct: 247 TTMVDGYAKAGDMESSRFLFEQA--AEKDVVTWSALISGYVQNGEANEALKVFLEMESMN 304
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG---VEASSDH-YSCLVDVLSRAGR 218
V PD +G++ A S G L R+ G ++ DH S LVD+ ++ G
Sbjct: 305 VIPDEFVLVGLMSAASQLG----DLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGN 360
Query: 219 LHEAYEVIRGMP 230
+ A ++ + MP
Sbjct: 361 MERALKLFQEMP 372
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K +HG R +D +G+ LI+ YG+CG + ++ VF+++ +++VV+W++++ Y
Sbjct: 135 KSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNEL--TERNVVSWTAMVVGYV 192
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G+ A + F M + V G +K G A F M E +
Sbjct: 193 TAGDVVKAKKVFDGMPLRNVASWNAMIRGFVK----VGDLSSARGVFDSMP-----EKNV 243
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
++ +VD ++AG + E+ + + W AL+ GE A A + E
Sbjct: 244 VSFTTMVDGYAKAGDM-ESSRFLFEQAAEKDVVTWSALISGYVQNGE---ANEALKVFLE 299
Query: 264 VEPENAA--NYVLLAKMYAS 281
+E N +VL+ M A+
Sbjct: 300 MESMNVIPDEFVLVGLMSAA 319
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPP--NESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
M++ YA D L +A F D P N ++ +IA + QN+ +++ L+ +M
Sbjct: 317 MVNGYAKCGD-LESARRFF---DQTPRKNAVCWSAMIAGYS-QNNKPKESLKLFHEMMER 371
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDP-HPQLGSGLIEAYGRCGCLVN 117
C + LNL IH Y + I P L + +++ Y +CG +
Sbjct: 372 GVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDA 431
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ VFS M + +++++W+++I+ YA +G AK A+ F +M G +P+ ITF+ +L AC
Sbjct: 432 ATEVFSTMPE--RNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTAC 489
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SH G + YF M+R YG++ HY+C+VD+L R G L EAY++I MP++ A
Sbjct: 490 SHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAA 549
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
WGALL ACR G + LA ++ ++PE++ YVLLA A+
Sbjct: 550 WGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKD 609
Query: 298 XGVKSTTGSSWV 309
GVK G S +
Sbjct: 610 KGVKKIPGYSLI 621
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+GLI Y G L N+ VF + DKDVV W+++I YA H ++ A+E F+ M ++
Sbjct: 183 NGLIHFYAERGLLKNARQVFDE--SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSH 240
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V+P+ +T + V+ ACS G + +++ + + S ++ L+D+ + L +A
Sbjct: 241 VEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE-EKNMRCSLSLHNALLDMYVKCDCLVDA 299
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
E+ M K +W +++ G+L E A R + +NA
Sbjct: 300 RELFDRMATK-DVYSWTSMVNGYAKCGDL---ESARRFFDQTPRKNAV 343
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + + + +H + N L + LI+ YG+CGCL + VF + + K ++
Sbjct: 251 CAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKR--KSLI 308
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++++ A HG A+ A F+ M +GV PDG+T L +L A +H GF D+ + F M
Sbjct: 309 TWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESM 368
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
QRDYGVE +HY +VD+L R+GRL EAY ++ MP+ WGALLGACR G++G+
Sbjct: 369 QRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGM 428
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E + E++P+ Y+LL +Y + G G + G SWV
Sbjct: 429 GERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
+R +D SGL+ A+ + G L + VF M + +DVV+W+ ++SAY+
Sbjct: 167 VRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE--RDVVSWTIMLSAYSKAKRPHE 224
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY---- 206
L+ F+EM +AGV PD +T L V+ AC+ G A+ RM + VE + +
Sbjct: 225 TLDLFQEMRLAGVWPDEVTVLSVISACAELGDAE-----MGRMVHKF-VEENGFGWMVAL 278
Query: 207 -SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ L+D+ + G L EA++V K + W A++ C N G
Sbjct: 279 CNSLIDMYGKCGCLEEAWQVFDRTKRK-SLITWNAMMMVCANHG 321
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + + + +H + N L + LI+ YG+CGCL + VF + + K ++
Sbjct: 251 CAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKR--KSLI 308
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++++ A HG A+ A F+ M +GV PDG+T L +L A +H GF D+ + F M
Sbjct: 309 TWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESM 368
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
QRDYGVE +HY +VD+L R+GRL EAY ++ MP+ WGALLGACR G++G+
Sbjct: 369 QRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGM 428
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E + E++P+ Y+LL +Y + G G + G SWV
Sbjct: 429 GERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
+R +D SGL+ A+ + G L + VF M + +DVV+W+ ++SAY+
Sbjct: 167 VRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE--RDVVSWTIMLSAYSKAKRPHE 224
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY---- 206
L+ F+EM +AGV PD +T L V+ AC+ G A+ RM + VE + +
Sbjct: 225 TLDLFQEMRLAGVWPDEVTVLSVISACAELGDAE-----MGRMVHKF-VEENGFGWMVAL 278
Query: 207 -SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ L+D+ + G L EA++V K + W A++ C N G
Sbjct: 279 CNSLIDMYGKCGCLEEAWQVFDRTKRK-SLITWNAMMMVCANHG 321
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQL--GSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C ++ALN K+IH Y +R + L + LI+ Y + G + + VF M ++
Sbjct: 373 CARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK--RN 430
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V+W+SL++ Y +HG ++ A F EM + PDGITFL VL ACSH+G D + F
Sbjct: 431 AVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFY 490
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
RM +D+GV+ +HY+C+VD+L RAGRL EA +I M ++ T W +LL ACR +
Sbjct: 491 RMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTHSNI 550
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE A + E++ +N Y LL+ +YA+ G+K G SWV
Sbjct: 551 ELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 608
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 29/285 (10%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES---TFNPIIAALAAQNDGSFKAIALYRKMXX 57
M++ Y+ + AL LF M ES T++ +I+ A + G +A+ ++R+M
Sbjct: 187 MVTGYSQNG-RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGC-EAMDVFRQMCG 244
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIR-------NDIDPHPQLGSGLIEAYG 110
C +V AL KE H Y ++ ND + + LI+ Y
Sbjct: 245 CRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYA 304
Query: 111 RCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGI 168
+C L + +F ++ D+DVV W+ +I YA HG+A AL+ F EM + P+
Sbjct: 305 KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF 364
Query: 169 TFLGVLKAC---SHAGFADDALCYFTRMQRDYGVEASSDHY---SCLVDVLSRAGRLHEA 222
T VL +C S F Y R Y SD +CL+D+ S++G + A
Sbjct: 365 TISCVLMSCARLSALNFGKQIHAYVLRRSLIY-----SDVLFVANCLIDMYSKSGDVDTA 419
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
V M K A +W +LL +G G +E A R E+ E
Sbjct: 420 QVVFDSMS-KRNAVSWTSLLTG---YGMHGRSEDAFRVFDEMRKE 460
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++HG+ +R+ + +G+ L++ Y +CG + ++ VF +MR KDVV W+++++ Y+
Sbjct: 135 RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRF--KDVVTWNAMVTGYS 192
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+G + AL F +M ++ D +T+ V+ + GF +A+ F +M
Sbjct: 193 QNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 242
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM--RDMDKD 131
C ++ L IHG IR + + + + +I YG+C +V++ VF ++ R + D
Sbjct: 20 CGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGI-CD 78
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYF 190
V W+S++S Y+ A+ F+EM + G+ PD + + +L C + G LC
Sbjct: 79 SVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGL---GLC-- 133
Query: 191 TRMQRDYGVEAS--SDHY--SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
R + V + D + + LVD+ ++ G++ +A +V M K W A++
Sbjct: 134 GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK-DVVTWNAMV 188
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ ++ S D + A F +M N T+N +++ QN S + + LY M
Sbjct: 451 MITAFSRSGD-IGKARGYFDMMP-ERNIVTWNSMLSTYV-QNGFSEEGLKLYVSMRSNGV 507
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++A + L ++ + + + + + + ++ Y RCG + + N
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKN 567
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F + D KD+++W+++++A+A +G ++TF++M KP+ I+++ VL CSH
Sbjct: 568 TFDSIDD--KDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHM 625
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + YF M R +G+ +++H+SC+VD+L RAG L +A ++I GMP K A W A
Sbjct: 626 GLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSA 685
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LLG+CR +L LAE A + E++ E + YVLL+ MY+ G G+
Sbjct: 686 LLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGI 745
Query: 301 KSTTGSSWV 309
+++ G SW+
Sbjct: 746 RTSRGCSWI 754
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 15/301 (4%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL++F+ M +E ++N +I+ + G + +A++ +M C
Sbjct: 231 ALQIFNRMP-ERDEVSWNTLISIFSQHGFG-VQCLAMFVEMCNQGFSPNFMTYGSVLSAC 288
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ + L +H +R + G+GLI+ Y +CGCL + VF +R+ D ++
Sbjct: 289 ASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH--IS 346
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+SLI+ G + AL F +M + V D +L CS +A
Sbjct: 347 WNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTI 406
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+ G+ +S+ + ++ + ++ G +A V R MP++ T +W A++ A G++G A
Sbjct: 407 KS-GMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI-SWTAMITAFSRSGDIGKA 464
Query: 255 EIAGRASAEVEPE-NAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSE 313
R ++ PE N + + Y G GV+ W+ ++
Sbjct: 465 ----RGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ----PDWITFTT 516
Query: 314 S 314
S
Sbjct: 517 S 517
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN--DIDPHPQLGSG 104
KA L RKM C ++++ + +++H Y +R DI+ L S
Sbjct: 187 KAFELIRKMPLLKLKYDHFTLSAALRACTGLSSVEMGRQLHSYLLRTMADIESDVFLQST 246
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMD------KDVVAWSSLISAYALHGEAKAALETFKEM 158
LIE YG+CG +V + K+ MD +DVV W+S++ Y +G K ++ + EM
Sbjct: 247 LIEMYGKCG-MVEKAQLVFKLDGMDIRKERSRDVVFWTSMLGVYGKNGHYKEVIDLYSEM 305
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
G+KPDGI+FL ++ AC H G D + YF M D+ ++ +HYSCLVD+L RAG
Sbjct: 306 LREGIKPDGISFLTIISACGHTGQVDAGVKYFESMTNDFKLDPGPEHYSCLVDLLCRAGE 365
Query: 219 LHEAYEVI------RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANY 272
L++A+E++ +G+ + WGALL AC + G + L ++A + + E++P+NA
Sbjct: 366 LNKAWELLNETCHHKGIG-NCSVSMWGALLSACVDSGNIELGKLAAQRALELDPQNAGIC 424
Query: 273 VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
V+L+ +YA +G G++ G SWV
Sbjct: 425 VMLSNVYARLGMWDEIGRLRVLINQRGLRKDVGCSWV 461
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 8/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES-TFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+I +YA + L +L F+++ P ++ ++N IIA QN + + +R+M
Sbjct: 268 LIDMYAKC-NRLECSLRAFYIL--PRKDAISWNSIIAG-CVQNGEFDRGLGFFRRMLKEN 323
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++ AL+L +++HG +R D + + S L++ Y +CG + +
Sbjct: 324 VKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMAR 383
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF ++ +D+VAW+++I A+HG A A+ F+ M GV+P + F+ VL ACSH
Sbjct: 384 YVFDRIDK--RDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSH 441
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP-VKVTAKAW 238
AG D+ YF M+RD+G+ +HY+ + D+L RAGRL EAY+ I M V+ T W
Sbjct: 442 AGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVW 501
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
LL ACR + LAE V+ EN YVL++ +Y++
Sbjct: 502 SILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKK 561
Query: 299 GVKSTTGSSWV 309
G+K T SW+
Sbjct: 562 GLKKTPACSWI 572
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+N KEIHGY +RN D +GS LI+ Y +C L S F + KD ++W+S+I
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP--RKDAISWNSII 300
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ---RD 196
+ +GE L F+ M VKP ++F V+ AC+H AL ++
Sbjct: 301 AGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHL----TALSLGRQLHGCIVR 356
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
G + + S LVD+ ++ G + A V + K AW A++ C G
Sbjct: 357 LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMHGH 409
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Query: 12 LPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ +A ++F+ +P P++ + +I+ +N +A+ Y +M
Sbjct: 551 MKSARKVFN--QIPSPDDVAWTTVISG-CVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + AL K+IH ++ + P + + L++ Y +CG + ++ +F +M +
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT--R 665
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
V W+++I A HG A+ AL F EM+ GV PD +TF+GVL ACSH+G DA F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
MQ+ YGVE +HYSCLVD LSRAG + EA +V+ MP + +A + LL ACR G+
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E ++P ++A YVLL+ +YA+ VK G SW+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWI 844
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IH I+ + SG+++ Y +CG + ++ VF+++ D VAW+++IS
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCV 577
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+GE + AL T+ +M +AGV+PD TF ++KACS T +++ + A+
Sbjct: 578 ENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS----------LLTALEQGKQIHANI 627
Query: 204 DHYSC---------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+C LVD+ ++ G + +AY + R M + A W A++
Sbjct: 628 MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMI 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A +LF + D + + +N +++ +G ++A+ +R M
Sbjct: 250 ATKLF-VCDDDSDVTVWNKTLSSYLQAGEG-WEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
++ L L K+IHG +R D + + I Y + G + + +F +M+++D +++
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD--LIS 365
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++IS A G + +L F ++ +G+ PD T VL+ACS +++ C ++
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVH 422
Query: 195 R---DYGVEASSDHYSCLVDVLSRAGRLHEA 222
G+ S + L+DV S+ G++ EA
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Query: 12 LPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ +A ++F+ +P P++ + +I+ +N +A+ Y +M
Sbjct: 551 MKSARKVFN--QIPSPDDVAWTTVISG-CVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + AL K+IH ++ + P + + L++ Y +CG + ++ +F +M +
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT--R 665
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
V W+++I A HG A+ AL F EM+ GV PD +TF+GVL ACSH+G DA F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
MQ+ YGVE +HYSCLVD LSRAG + EA +V+ MP + +A + LL ACR G+
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E ++P ++A YVLL+ +YA+ VK G SW+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWI 844
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IH I+ + SG+++ Y +CG + ++ VF+++ D VAW+++IS
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCV 577
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+GE + AL T+ +M +AGV+PD TF ++KACS T +++ + A+
Sbjct: 578 ENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS----------LLTALEQGKQIHANI 627
Query: 204 DHYSC---------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+C LVD+ ++ G + +AY + R M + A W A++
Sbjct: 628 MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMI 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A +LF + D + + +N +++ +G ++A+ +R M
Sbjct: 250 ATKLF-VCDDDSDVTVWNKTLSSYLQAGEG-WEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
++ L L K+IHG +R D + + I Y + G + + +F +M+++D +++
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD--LIS 365
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++IS A G + +L F ++ +G+ PD T VL+ACS +++ C ++
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVH 422
Query: 195 R---DYGVEASSDHYSCLVDVLSRAGRLHEA 222
G+ S + L+DV S+ G++ EA
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 151/299 (50%), Gaps = 6/299 (2%)
Query: 12 LPTALELFHLMDVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ +A ++F+ +P P++ + +I+ +N +A+ Y +M
Sbjct: 551 MKSARKVFN--QIPSPDDVAWTTVISG-CVENGEEEQALFTYHQMRLAGVQPDEYTFATL 607
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + AL K+IH ++ + P + + L++ Y +CG + ++ +F +M +
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT--R 665
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
V W+++I A HG A+ AL F EM+ GV PD +TF+GVL ACSH+G DA F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
MQ+ YGVE +HYSCLVD LSRAG + EA +V+ MP + +A + LL ACR G+
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E ++P ++A YVLL+ +YA+ VK G SW+
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWI 844
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IH I+ + SG+++ Y +CG + ++ VF+++ D VAW+++IS
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDD--VAWTTVISGCV 577
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+GE + AL T+ +M +AGV+PD TF ++KACS T +++ + A+
Sbjct: 578 ENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS----------LLTALEQGKQIHANI 627
Query: 204 DHYSC---------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+C LVD+ ++ G + +AY + R M + A W A++
Sbjct: 628 MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMI 674
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A +LF + D + + +N +++ +G ++A+ +R M
Sbjct: 250 ATKLF-VCDDDSDVTVWNKTLSSYLQAGEG-WEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
++ L L K+IHG +R D + + I Y + G + + +F +M+++D +++
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD--LIS 365
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++IS A G + +L F ++ +G+ PD T VL+ACS +++ C ++
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVH 422
Query: 195 R---DYGVEASSDHYSCLVDVLSRAGRLHEA 222
G+ S + L+DV S+ G++ EA
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 136/236 (57%), Gaps = 4/236 (1%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM-RDMDKDVVA 134
+V AL +IH I+N + + + LI+ YG+CG L ++ ++F ++ RD V
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS---VP 494
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++I++ +HG + AL+ FK+M VK D ITF+ +L ACSH+G D+ F MQ
Sbjct: 495 WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
++YG++ S HY C+VD+L RAG L +AYE++R MP++ A WGALL AC+ +G L
Sbjct: 555 KEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELG 614
Query: 255 EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+A EV+ EN YVLL+ +YA+ G++ T G S VV
Sbjct: 615 TLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVV 670
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH + +++ +D + + LI Y + G L ++ VF +M +D+V+W+S+I+AY +
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV--RDLVSWNSIIAAYEQN 301
Query: 146 GEAKAALETFKEMEMAGVKPDGITFL---GVLKACSHAGFADDALCYFTR---MQRDYGV 199
+ AL FK M++ G++PD +T + + S + L + R + +D +
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+ LV++ ++ G ++ A+ V +P K T +W L+ + + GLA A
Sbjct: 362 G------NALVNMYAKLGYMNCAHTVFDQLPRKDTI-SWNTLVTG---YTQNGLASEAID 411
Query: 260 ASAEVEP-----ENAANYVLLAKMYASVG 283
A +E N +V + Y+ VG
Sbjct: 412 AYNMMEECRDTIPNQGTWVSIIPAYSHVG 440
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CVNV N K++H + + L + LI Y G + S + F + K++
Sbjct: 32 CVNV---NATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHK--KNIF 86
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAG---VKPDGITFLGVLKACSHAGFADDALCY 189
+W+S+ISAY G+ A+ ++ M G ++PD TF +LKAC C
Sbjct: 87 SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCC 146
Query: 190 FTRM--QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACR 246
+M + D V AS LV + SR G L A++V MPVK +W A++ G C+
Sbjct: 147 VFKMGFEDDVFVAAS------LVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQ 199
Query: 247 NFGELGLAEIAGRASAE 263
N G + R E
Sbjct: 200 NGNAAGALGVLNRMKGE 216
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H + + + + L+ Y R G L + VF M KDV +W+++IS +
Sbjct: 141 KKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV--KDVGSWNAMISGFC 198
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+G A AL M+ GVK D IT +L C+ + + + + + +G+++
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK-HGLDSDV 257
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ L+++ S+ GRL +A V M V+ +W +++ A
Sbjct: 258 FVSNALINMYSKFGRLQDAQMVFDQMEVRDLV-SWNSIIAA 297
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 41/312 (13%)
Query: 1 MISLYAHSPDNLPTALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
M++ YA + + A +LFH + + PNE TF+ +I A A+
Sbjct: 465 MLAGYAQTGET-EEAAKLFHQLIKEGIKPNEFTFSSVINACASP---------------- 507
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
AA K+ H Y I+ ++ + S L+ Y + G + +
Sbjct: 508 -------------------TAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDS 548
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ VF R ++D+V+W+S+IS Y+ HG+AK ALE F EM+ + D +TF+GV+ AC
Sbjct: 549 AHEVFK--RQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC 606
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+HAG + YF M D+ + + HYSC++D+ SRAG L +A +I MP A
Sbjct: 607 THAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATV 666
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
W LLGA R + L E+A ++PE++A YVLL+ MYA+ G
Sbjct: 667 WRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDK 726
Query: 298 XGVKSTTGSSWV 309
VK G SW+
Sbjct: 727 RKVKKEPGYSWI 738
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 19/258 (7%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
AL LF LM+ N ++ +I+ QN G+ +A+ L+ +M
Sbjct: 349 ALSLFSLMEEGKNVVSWTAMISG-CLQNGGNDQAVNLFSQMRREGVKPNHFTYSA----I 403
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ V + E+H I+ + + +G+ L++AY + G +++ VF + KD++A
Sbjct: 404 LTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEA--KDLMA 461
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA----LCYF 190
WS++++ YA GE + A + F ++ G+KP+ TF V+ AC+ A + Y
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYA 521
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+M+ + + S S LV + ++ G + A+EV + + +W +++ + +
Sbjct: 522 IKMRLNNALCVS----SALVTMYAKRGNIDSAHEVFKRQKERDLV-SWNSMISG---YSQ 573
Query: 251 LGLAEIAGRASAEVEPEN 268
G A+ A E++ N
Sbjct: 574 HGQAKKALEVFDEMQKRN 591
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
VN + + ++H +++ + + + LI Y R G L ++ +VF KM +D V
Sbjct: 205 VNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI--RDWVT 262
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S+I+ Y +G+ E F +M++AGVKP +TF V+K+C A + AL + +
Sbjct: 263 WNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC--ASLRELALVKLMQCK 320
Query: 195 R-DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
G + L+ LS+ + +A + M +W A++ C G
Sbjct: 321 ALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG 376
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX-- 68
+ AL +F + P + +T+N +I+ S +A+ +R+M
Sbjct: 151 TMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYS-EAVHCFREMLKYRNGIELDHMTLP 209
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD 127
C L +KE+HG+ +RN D +G+ LI+ YG+CG L +S N+F +
Sbjct: 210 SILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCY 269
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
++ +V W+++IS Y +HG+ + ++ F++M G +P+ +T +L +CSH G D
Sbjct: 270 VN--LVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGK 327
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP-VKVTAKAWGALLGACR 246
F M DYG+E +++HY+C+VD+ SR GRL EA +++ M VT WGALL C
Sbjct: 328 KIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAGCV 387
Query: 247 NFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGS 306
+ + E+A ++EP N +NYV L +Y S G G+ T G
Sbjct: 388 MHQNVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVKTPGC 447
Query: 307 SWV 309
SW+
Sbjct: 448 SWI 450
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 152/286 (53%), Gaps = 10/286 (3%)
Query: 1 MISLYAHSPDNLPTALELFH---LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
+I LY +L A +F L DV ++ II + A + + KA+ L+ KM
Sbjct: 314 LIYLYCECGQSLHLAERIFEGSSLRDV----VLWSSIIGSYARRGESD-KALKLFNKMRT 368
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C N+++ IHGY ++ I + + LI Y +CG L +
Sbjct: 369 EETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDD 428
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
S +F +M +D V W+S+ISAY LHG + AL+ F EM+ GVK D +TFL VL AC
Sbjct: 429 SRKIFLEMPS--RDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSAC 486
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+HAG + F ++ D + + +HY+CL+D+ R+G+L +A E++R MP+K +A+
Sbjct: 487 NHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARI 546
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
W +L+ +C+ G L +AE EP NAA+Y LL+ ++A G
Sbjct: 547 WSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKG 592
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+ Y D+L A +F M+V NE ++ +I+ A D A+A YR+M
Sbjct: 213 FVDFYFRCGDSL-MARSVFDEMEVK-NEVSWTAVISGCANNQDYDV-ALACYREMQVEGV 269
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + KEIHGY R D LI Y CG S +
Sbjct: 270 SPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECG---QSLH 326
Query: 121 VFSKMRDMD--KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+ ++ + +DVV WSS+I +YA GE+ AL+ F +M +P+ +T L V+ AC+
Sbjct: 327 LAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACT 386
Query: 179 H-AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
+ + F + + ++ +G+ S + L+++ ++ G L ++ ++ MP + +
Sbjct: 387 NLSSFKHGGVIHGYILK--FGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSV-T 443
Query: 238 WGALLGA--CRNFGELGL 253
W +++ A +GE L
Sbjct: 444 WNSMISAYGLHGYGEQAL 461
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 84 KEIHGYGI---RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
++IHG + R I L + ++ Y RCG + + +VF +M K+ V+W+++IS
Sbjct: 189 RQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEV--KNEVSWTAVIS 246
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
A + + AL ++EM++ GV P+ +T + +L AC+ GF + + Y
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVK-----YGKEIHGYAFR 301
Query: 201 ASSDHYSC------LVDVLSRAGR-LHEAYEVIRGMPVKVTAKAWGALLGACRNFGE--L 251
D SC L+ + G+ LH A + G ++ W +++G+ GE
Sbjct: 302 RGFD--SCHSFSPALIYLYCECGQSLHLAERIFEGSSLR-DVVLWSSIIGSYARRGESDK 358
Query: 252 GLAEIAGRASAEVEPENAANYVLL 275
L + E EP NYV L
Sbjct: 359 ALKLFNKMRTEETEP----NYVTL 378
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L L + + Y + ID + S L++ +CG + + +F +M +D+V++ S+
Sbjct: 325 LKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPK--RDLVSYCSM 382
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
I +++HG + A+ F M M G+ PD F VL ACSH+G D YF M+ +YG
Sbjct: 383 IHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYG 442
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
+ + DH++C+VD+L R+G+L +AYE+I+ M ++ A AWGAL+GAC+ G+ L EI
Sbjct: 443 ISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLHGDTELGEIVA 502
Query: 259 RASAEVEPENAANYVLLAKMYASVG 283
E+EP+NAANYVLL+ +YA+ G
Sbjct: 503 NRLFELEPQNAANYVLLSNIYAAAG 527
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I+ Y + G + +S +F + + KDVVAWS+LIS Y +GEA AL+ F EME
Sbjct: 247 TTMIDGYAKAGDMESSRFLFEQAAE--KDVVAWSALISGYVQNGEANEALKVFLEMESMK 304
Query: 163 VKPDGITFLGVLKACSHAG---FADDALCYFTR----MQRDYGVEASSDHYSCLVDVLSR 215
V PD + ++ A S G A Y +Q+DY + A LVD+ ++
Sbjct: 305 VIPDEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISA-------LVDMNAK 357
Query: 216 AGRLHEAYEVIRGMPVK 232
G + A ++ R MP +
Sbjct: 358 CGNMERALKLFREMPKR 374
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K +HG R +D +G+ L++ YG+CG + ++ VF ++ D++VV+W++++ Y
Sbjct: 135 KSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELS--DRNVVSWTAMVVGYV 192
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G+ A + F EM + V G +K G A F M E +
Sbjct: 193 TAGDVVEAKKVFDEMPLRNVASWNAMIRGFVK----VGDLSSARGVFDSMP-----EKNV 243
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
++ ++D ++AG + E+ + + AW AL+ GE
Sbjct: 244 VSFTTMIDGYAKAGDM-ESSRFLFEQAAEKDVVAWSALISGYVQNGE 289
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 160/309 (51%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ +YA + D + A +F M + + ++ ++ A QN+ +++ ++ M
Sbjct: 376 LVDMYAKTGD-MDCAYTVFEKM-LEKDVISWTSLVTGYA-QNNSHEESLKIFCDMRVTGV 432
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + L K++H I++ + + + L+ Y +CGCL ++
Sbjct: 433 NPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADA 492
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F M+ KDV+ W+++I YA +G+ + +L+ + M +G +PD ITF+G+L ACSHA
Sbjct: 493 IFVSMQV--KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHA 550
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ YF +M + YG++ +HY+C++D+ R+G+L EA +++ M VK A W +
Sbjct: 551 GLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKS 610
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL ACR L LAE A E+EP NA YV+L+ MY++ G+
Sbjct: 611 LLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 670
Query: 301 KSTTGSSWV 309
G SW+
Sbjct: 671 VKEPGCSWL 679
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN +KA+ +R M C +V A +++HG+ +++ +
Sbjct: 212 AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 271
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L++ Y +CG L N+ N+ M D DVV+W+SL+ + HG + AL FK M
Sbjct: 272 YVQSALVDMYAKCGDLKNAKNMLETMED--DDVVSWNSLMVGFVRHGLEEEALRLFKNMH 329
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
+K D TF VL C ++ + G E + LVD+ ++ G +
Sbjct: 330 GRNMKIDDYTFPSVLNCCVVGSINPKSV---HGLIIKTGFENYKLVSNALVDMYAKTGDM 386
Query: 220 HEAYEVIRGMPVKVTAKAWGALL 242
AY V M K +W +L+
Sbjct: 387 DCAYTVFEKMLEK-DVISWTSLV 408
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V ++N K +HG I+ + + + + L++ Y + G + + VF KM ++KDV+
Sbjct: 346 CCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM--LEKDVI 402
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+SL++ YA + + +L+ F +M + GV PD +L AC+ + + ++
Sbjct: 403 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE----FGKQV 458
Query: 194 QRDY---GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
D+ G+ S Y+ LV + ++ G L +A + M VK W A++
Sbjct: 459 HLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 509
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A L+R M C ++ + + IHG+ ++N + + + +GL+
Sbjct: 116 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 175
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +C C+ + +F + K+ V W+++++ YA +G+ A+E F+ M GV+ +
Sbjct: 176 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECN 235
Query: 167 GITFLGVLKACSHA---GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
TF +L ACS F + + + G ++ S LVD+ ++ G L A
Sbjct: 236 QYTFPTILTACSSVLARCFGEQVHGFIVKS----GFGSNVYVQSALVDMYAKCGDLKNAK 291
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
++ M +W +L+ F GL E A R + N
Sbjct: 292 NMLETMEDDDVV-SWNSLMVG---FVRHGLEEEALRLFKNMHGRN 332
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 159/313 (50%), Gaps = 16/313 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXX 58
MIS YA D LP+A HL D P T +N +IA QN SFKAI L+ +M
Sbjct: 328 MISAYARVGD-LPSAK---HLFDKMPQRDTVSWNSMIAGYT-QNGESFKAIKLFEEMISS 382
Query: 59 XXXXX--XXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLV 116
C ++ L L N I + + LI Y RCG +
Sbjct: 383 EDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQ 442
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
++ +F +M +D+V++++LIS +A HG ++E +M+ G++PD IT++ +L A
Sbjct: 443 DAVLIFQEM--ATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTA 500
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
CSHAG D+ F ++ DHY+C++D+L RAGRL EA ++I+ MP++ A
Sbjct: 501 CSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAG 555
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
+G+LL A ++ L E+A +VEP N+ NY LL+ +YAS G
Sbjct: 556 IYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMR 615
Query: 297 XXGVKSTTGSSWV 309
GVK TTG SW+
Sbjct: 616 KQGVKKTTGLSWL 628
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 23/244 (9%)
Query: 1 MISLYAH--SPDNLPTALELFHLM----DVPPNESTFNPIIAALAAQNDGSFKAIALYR- 53
M+S YA +P+ + LF+ M +V P+E+T+ +I++ ++ D + +
Sbjct: 222 MLSGYAQGGAPEE---TIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKL 278
Query: 54 --KMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG-YGIRNDIDPHPQLGSGLIEAYG 110
K+ C N+ A + I E G Y R+ + + +I AY
Sbjct: 279 DDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-----WNAMISAYA 333
Query: 111 RCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA--GVKPDGI 168
R G L ++ ++F KM +D V+W+S+I+ Y +GE+ A++ F+EM + KPD +
Sbjct: 334 RVGDLPSAKHLFDKMP--QRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEV 391
Query: 169 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRG 228
T + V AC H G + ++ ++ ++ S Y+ L+++ SR G + +A + +
Sbjct: 392 TMVSVFSACGHLGELGLGNWAVSILKVNH-IQISISVYNSLINMYSRCGSMQDAVLIFQE 450
Query: 229 MPVK 232
M +
Sbjct: 451 MATR 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I + + G L + F KM + + VV+W++++S YA G + + F +M G
Sbjct: 189 TTMITGHAKKGNLKTARMYFDKMPE--RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPG 246
Query: 163 -VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
V+PD T+ V+ +CS G + ++ G + + L+D+ ++ G L
Sbjct: 247 NVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEA 306
Query: 222 AYEVIRGMPVKV--TAKAWGALLGACRNFGEL 251
A+++ + V ++ W A++ A G+L
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDL 338
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 148/286 (51%), Gaps = 5/286 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL--I 83
P ST+N +I + QN+ +A+ L R+M + NL +
Sbjct: 354 PGLSTWNDVIPGMV-QNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGL 412
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KE+HGY IR D + + + ++++Y + G + + VF + + ++ W+S+I AYA
Sbjct: 413 KEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQ--SQSRSLIIWTSIIYAYA 470
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG+A AL + +M G++PD +T VL AC+H+G ++A F M +G++
Sbjct: 471 SHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVV 530
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY+C+V VLSRAG+L EA + I MP + TAK WGALL + ++ + + A E
Sbjct: 531 EHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFE 590
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+EPE+ NY+++A +Y+ G G GSSW+
Sbjct: 591 IEPEHTGNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWI 636
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 134/237 (56%), Gaps = 3/237 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI+L+ M C ++A L + +H Y + LG+ L+
Sbjct: 499 EAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALV 558
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG L S VF M M+KDV+ W+++IS Y ++G A++A+E F ME + VKP+
Sbjct: 559 DMYAKCGQLEKSREVFDSM--MEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPN 616
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
ITFL +L AC+HAG ++ F +MQ Y V+ + HY+C+VD+L R+ L EA E++
Sbjct: 617 EITFLSLLSACAHAGLVEEGKNVFAKMQ-SYSVKPNLKHYTCMVDLLGRSCNLEEAEELV 675
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
MP+ WGALL AC+ ++ + G+ + + EPEN Y+++A MY+S+G
Sbjct: 676 LSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIG 732
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
K I L+R+M C + +NL + IH I+ +D + + LI
Sbjct: 399 KCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLI 458
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
E YG+C + S +F++ ++DV+ W++LISA+ + A+ F M M P+
Sbjct: 459 EMYGKCDKMNVSWRIFNRS---ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPN 515
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQR---DYGVEASSDHYSCLVDVLSRAGRLHEAY 223
T + VL ACSH F + R+ R + G + + + LVD+ ++ G+L ++
Sbjct: 516 TATLVVVLSACSHLAFLEKG----ERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSR 571
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
EV M K W A++ +G G AE A +E N
Sbjct: 572 EVFDSMMEK-DVICWNAMISG---YGMNGYAESAIEIFNLMEESNV 613
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+GS + Y RC + ++ VF ++ +DVVAW++L+ Y +GE++ LE EM
Sbjct: 148 VGSSFVSLYSRCDEMNDAVKVFDEIPV--RDVVAWTALVIGYVQNGESEMGLECISEMYR 205
Query: 161 AG---VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
G KP+ T G AC + G C + ++ G+ D S ++ + + G
Sbjct: 206 VGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKN-GIGCLLDIQSSVLSMYCKCG 264
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
EAY+ + + +W +++ FG
Sbjct: 265 VPREAYQSFSEV-INKDLLSWTSMIRVYARFG 295
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 144/296 (48%), Gaps = 4/296 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L AL +F M N ++N +I A+ Q +AI L R+M
Sbjct: 416 LELALRIFGEMP-ESNLVSWNTMIGAMV-QASMFEEAIDLLREMQNQGIKGDRVTMVGIA 473
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + AL+L K I+ Y +NDI QLG+ L++ + RCG +N+ VF M +D
Sbjct: 474 SACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEK--RD 531
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V AW++ I A+ G AK A+E F EM VK D F+ +L A SH G+ D F
Sbjct: 532 VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFW 591
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M++ +GV HY C+VD+L RAG L EA+++++ MP+K WG+ L ACR +
Sbjct: 592 AMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNV 651
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
A A ++ PE +VLL+ +YAS G G + GSS
Sbjct: 652 EFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSS 707
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K++ + + + + L++ Y +CG + +F + D K++V
Sbjct: 243 CAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSD--KNLV 300
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+++++S Y HG A L EM G +PD +T L + AC+ G +
Sbjct: 301 MYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYV 360
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
R+ G+E + + ++D+ + G+ A +V M K T W +L+ GEL
Sbjct: 361 FRN-GLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK-TVVTWNSLIAGLVRDGEL-- 416
Query: 254 AEIAGRASAEVEPENAANY 272
E+A R E+ N ++
Sbjct: 417 -ELALRIFGEMPESNLVSW 434
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + A + ++HG ++ + + + LI Y CG + VF +M ++++VV
Sbjct: 142 CSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEM--LERNVV 199
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-CYFTR 192
+W+SLI+ Y++ AK A+ F EM GV+P+ +T + + AC A D L
Sbjct: 200 SWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISAC--AKLKDLELGKKVCN 257
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
+ + GV++++ + L+D+ + G ++ E+
Sbjct: 258 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREI 290
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 128/225 (56%), Gaps = 5/225 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+H ++ + + LI AYGR G L S VF++M D+V+W+S++ +YA+
Sbjct: 422 EVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGC--HDLVSWNSMLKSYAI 479
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
HG AK AL+ FK+M+ V PD TF+ +L ACSHAG ++ F M +G+ D
Sbjct: 480 HGRAKDALDLFKQMD---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLD 536
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HYSC+VD+ RAG++ EA E+IR MP+K + W +LLG+CR GE LA++A +
Sbjct: 537 HYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVL 596
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+P+N+ Y+ ++ +Y+S G V+ G SWV
Sbjct: 597 DPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWV 641
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 2/262 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A++ +R+M C +V AL+ + +H Y ND + + LG+ L++
Sbjct: 293 ALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVD 352
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CGC+ + VF ++ K+V W+++I+ A+HG+A AL F M +G++P+
Sbjct: 353 MYAKCGCVDKALMVFENLQV--KNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPND 410
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
+TFLGVL ACSH GF D+ F M+ Y ++ + +HY C+VD+L RAG L +A ++I
Sbjct: 411 VTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIID 470
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP+K + GALLGAC + + + E G ++ + Y LLA +Y++
Sbjct: 471 NMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEA 530
Query: 288 XXXXXXXXXXXGVKSTTGSSWV 309
V+ T G SW+
Sbjct: 531 VARVRKLMKGTQVEKTPGYSWI 552
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+G I A+G G + N+C VF + ++D+VAW++LI+ + +G AL F EM + G
Sbjct: 145 NGFISAFGCSGFMKNACKVFDE--SPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKG 202
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY----GVEASSDHYSCLVDVLSRAGR 218
V DG T VL+A + G C+ R+ Y V Y LVD+ + G
Sbjct: 203 VVIDGFTVASVLRAAALVG----DYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGY 258
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGA---CRNFGE 250
+A +V MP + AW ++ C+ + +
Sbjct: 259 CEDACKVFDEMPYR-DVVAWTVVVAGFVQCKKYQD 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 84 KEIHGYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K +HG+ + + + L++ Y +CG ++C VF +M +DVVAW+ +++ +
Sbjct: 227 KRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY--RDVVAWTVVVAGF 284
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+ + AL F+ M + V P+ T VL AC+H G D M+ + +
Sbjct: 285 VQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN-DCNLN 343
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE-LGLAEIAGR 259
+ + LVD+ ++ G + +A V + VK W A++ G+ LG I R
Sbjct: 344 AVLGTSLVDMYAKCGCVDKALMVFENLQVK-NVHTWTAMINGLAVHGDALGALNIFSR 400
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 2/262 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A++ +R+M C +V AL+ + +H Y ND + + LG+ L++
Sbjct: 293 ALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVD 352
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CGC+ + VF ++ K+V W+++I+ A+HG+A AL F M +G++P+
Sbjct: 353 MYAKCGCVDKALMVFENLQV--KNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPND 410
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
+TFLGVL ACSH GF D+ F M+ Y ++ + +HY C+VD+L RAG L +A ++I
Sbjct: 411 VTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIID 470
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP+K + GALLGAC + + + E G ++ + Y LLA +Y++
Sbjct: 471 NMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEA 530
Query: 288 XXXXXXXXXXXGVKSTTGSSWV 309
V+ T G SW+
Sbjct: 531 VARVRKLMKGTQVEKTPGYSWI 552
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+G I A+G G + N+C VF + ++D+VAW++LI+ + +G AL F EM + G
Sbjct: 145 NGFISAFGCSGFMKNACKVFDE--SPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKG 202
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY----GVEASSDHYSCLVDVLSRAGR 218
V DG T VL+A + G C+ R+ Y V Y LVD+ + G
Sbjct: 203 VVIDGFTVASVLRAAALVG----DYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGY 258
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGA---CRNFGE 250
+A +V MP + AW ++ C+ + +
Sbjct: 259 CEDACKVFDEMPYR-DVVAWTVVVAGFVQCKKYQD 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 84 KEIHGYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K +HG+ + + + L++ Y +CG ++C VF +M +DVVAW+ +++ +
Sbjct: 227 KRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPY--RDVVAWTVVVAGF 284
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+ + AL F+ M + V P+ T VL AC+H G D M+ + +
Sbjct: 285 VQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHN-DCNLN 343
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE-LGLAEIAGR 259
+ + LVD+ ++ G + +A V + VK W A++ G+ LG I R
Sbjct: 344 AVLGTSLVDMYAKCGCVDKALMVFENLQVK-NVHTWTAMINGLAVHGDALGALNIFSR 400
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 140/276 (50%), Gaps = 2/276 (0%)
Query: 34 IIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN 93
+I AQN +AI ++ KM L L K+IH I+
Sbjct: 322 VILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKK 381
Query: 94 DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALE 153
+ +P +G+GL+ Y +CG L +S VF +M K+ V+W+S+I+A+A HG+ AL+
Sbjct: 382 NFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQ--KNSVSWNSVIAAFARHGDGFKALQ 439
Query: 154 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 213
++EM + GV P +TFL +L ACSHAG + + M D+G+ S+HY+C+VD+L
Sbjct: 440 FYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDML 499
Query: 214 SRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYV 273
RAG L+EA + I G+P W ALLGAC G+ + + A P + A YV
Sbjct: 500 GRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYV 559
Query: 274 LLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L+A +Y+S G GV G SW+
Sbjct: 560 LMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWI 595
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
++ + IHG + +G+ LI +Y +C C VF +M ++++VV W+++IS
Sbjct: 166 SVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEM--IERNVVTWTAVIS 223
Query: 141 AYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADD-----ALCYFTRMQ 194
A + + +L F +M G V P+ +T+L L ACS D L + MQ
Sbjct: 224 GLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQ 283
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
D +E S L+D+ S+ G L A+++
Sbjct: 284 SDLCIE------SALMDLYSKCGSLDAAWQIFE 310
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 155/283 (54%), Gaps = 5/283 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI Y + D + AL+LF + V N ++ +I + + +A+ +R+M
Sbjct: 163 MIDGYMKNGD-VDDALKLFDKLPVK-NVVSWTVVIGGFV-KKECYEEALECFREMQLAGV 219
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C N+ AL L +H ++ + + ++ + LI+ Y RCGC+ +
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF M +++V+W+S+I +A++G A AL F+ M+ G++P+G+++ L ACSHA
Sbjct: 280 VFDGMSQ--RNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHA 337
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ L F ++RD+ +HY CLVD+ SRAGRL EA++VI+ MP+ G+
Sbjct: 338 GLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGS 397
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL ACR G++ LAE + E+ P +NYVL + +YA+VG
Sbjct: 398 LLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVG 440
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 140/270 (51%), Gaps = 2/270 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
A N +AI L+ +M C ++ AL L G + +P
Sbjct: 282 ASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNP 341
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
LG+ LI+ Y +CG + + V+ M++ KD V ++++IS A++G+ AA F +M
Sbjct: 342 VLGTSLIDFYAKCGSMEEALGVYKMMKE--KDRVVFNAVISGLAMYGQVGAAFGVFGQMG 399
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G+ P+ TF+G+L C+HAG DD YF M D+ V + +HY C+VD+L+RAG L
Sbjct: 400 KFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFL 459
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EA+ +I+GMP+K WG+LLG CR E LAE + E+EP N+ +YVLL+ +Y
Sbjct: 460 DEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIY 519
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ G++ G SWV
Sbjct: 520 SASRRWDEAEKIRSTVNEKGMQKLPGYSWV 549
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 10 DNLPTALELFHLMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXX 67
+N + +FH P N +TF N +I + ++ D A+ LY M
Sbjct: 51 NNAQYPILVFH--KTPTNSNTFLYNTMIRGMVSK-DRFNNAVHLYASMHKAAIVPDSFTF 107
Query: 68 XXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD 127
C + +L IH + D + + ++ Y +CG L ++ VF M
Sbjct: 108 SFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM-- 165
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
+ K+VV+W+ +I G+ + A++ F+ + +G++PDG + VL+AC+ G +
Sbjct: 166 VVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGR 225
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ R R+ G+ + + LVD+ ++ G + EA V GM V+ W A++
Sbjct: 226 -WIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMI 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L++ Y +CG + + VF M ++KD+V WS++I YA +G + A+E F EM
Sbjct: 242 VATSLVDMYTKCGSMEEARFVFDGM--VEKDIVCWSAMIQGYASNGLPREAIELFFEMRK 299
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY-SCLVDVLSRAGRL 219
V+PD +G L +C+ G + L + + +Y S+ + L+D ++ G +
Sbjct: 300 VNVRPDCYAMVGALSSCASLGALE--LGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA-EIAGRASAEVEPENAANYV 273
EA V + M K + A++ +G++G A + G+ P N +V
Sbjct: 358 EEALGVYKMMKEKDRV-VFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFV 411
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN S +A+ + M C N+A+L + H + + +
Sbjct: 362 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 421
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L+ YG+CG + +S +F+++ KD V W++L+S YA G+A + F+ M
Sbjct: 422 VSNALVTLYGKCGSIEDSHRLFNEISF--KDEVTWTALVSGYAQFGKANETIGLFESMLA 479
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KPD +TF+GVL ACS AG + F M ++G+ DHY+C++D+ SRAGR+
Sbjct: 480 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIE 539
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA I MP A +W LL +CR +G + + + A E++P N A+YVLL+ +YA
Sbjct: 540 EARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYA 599
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+ G G++ G SW+ Y
Sbjct: 600 AKGKWEEVARLRKDMRDKGLRKEPGCSWIKY 630
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QN AI ++R+M C V AL K++H Y IR D +
Sbjct: 260 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNI 319
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L+ Y +C + ++ VF KM K+VV+W++++ Y +G ++ A++TF +M+
Sbjct: 320 FVASALVVMYCKCKNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G++PD T V+ +C++ ++ + R G+ + + LV + + G +
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS-GLISFITVSNALVTLYGKCGSI 436
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGE----LGLAE 255
+++ + + K W AL+ FG+ +GL E
Sbjct: 437 EDSHRLFNEISFKDEV-TWTALVSGYAQFGKANETIGLFE 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI RCG + +S +F +MR+ +D ++W+S+I+ + +G + A++ F+EM++ ++
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMRE--RDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 281
Query: 165 PDGITFLGVLKAC 177
D TF VL AC
Sbjct: 282 MDQYTFGSVLTAC 294
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN S +A+ + M C N+A+L + H + + +
Sbjct: 362 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 421
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L+ YG+CG + +S +F+++ KD V W++L+S YA G+A + F+ M
Sbjct: 422 VSNALVTLYGKCGSIEDSHRLFNEISF--KDEVTWTALVSGYAQFGKANETIGLFESMLA 479
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KPD +TF+GVL ACS AG + F M ++G+ DHY+C++D+ SRAGR+
Sbjct: 480 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIE 539
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA I MP A +W LL +CR +G + + + A E++P N A+YVLL+ +YA
Sbjct: 540 EARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYA 599
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+ G G++ G SW+ Y
Sbjct: 600 AKGKWEEVARLRKDMRDKGLRKEPGCSWIKY 630
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QN AI ++R+M C V AL K++H Y IR D +
Sbjct: 260 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNI 319
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L+ Y +C + ++ VF KM K+VV+W++++ Y +G ++ A++TF +M+
Sbjct: 320 FVASALVVMYCKCKNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G++PD T V+ +C++ ++ + R G+ + + LV + + G +
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS-GLISFITVSNALVTLYGKCGSI 436
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGE----LGLAE 255
+++ + + K W AL+ FG+ +GL E
Sbjct: 437 EDSHRLFNEISFKDEV-TWTALVSGYAQFGKANETIGLFE 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI RCG + +S +F +MR+ +D ++W+S+I+ + +G + A++ F+EM++ ++
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMRE--RDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 281
Query: 165 PDGITFLGVLKAC 177
D TF VL AC
Sbjct: 282 MDQYTFGSVLTAC 294
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 134/238 (56%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L + +H ++ + + +GS L++ YG+CG + N+ VFS++ + ++V
Sbjct: 320 CAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPE--SNLV 377
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA--GVKPDGITFLGVLKACSHAGFADDALCYFT 191
W+++I YA G+ AL F+EM + G++P +T + +L CS G + + F
Sbjct: 378 TWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFE 437
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ +YG+E ++H++C+VD+L R+G + AYE I+ MP++ T WGALLGACR G+
Sbjct: 438 SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGACRMHGKT 497
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L +IA E++ ++ N+V+L+ M AS G G+K G SW+
Sbjct: 498 ELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWI 555
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 13/232 (5%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N +T+N I+ A Q+ S IA +++ CV++ LNL +++
Sbjct: 173 NLATWNAYISN-AVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQL 231
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H + +R + +GLI+ YG+CG +V++ VFS++ + K+VV+W S+++A +
Sbjct: 232 HAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGN-RKNVVSWCSMLTALVQNH 290
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS-SDH 205
E + A F ++ V+P VL AC+ G + R V+A D+
Sbjct: 291 EEERACMVFLQVRKE-VEPTDFMISSVLSACAELGGLE-----LGRSVHALAVKACVKDN 344
Query: 206 Y---SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
S LVD+ + G + A +V +P + W A++G + G++ +A
Sbjct: 345 IFVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGGYAHQGDIDMA 395
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN S +A+ + M C N+A+L + H + + +
Sbjct: 353 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 412
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L+ YG+CG + +S +F+++ KD V W++L+S YA G+A + F+ M
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISF--KDEVTWTALVSGYAQFGKANETIGLFESMLA 470
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KPD +TF+GVL ACS AG + F M ++G+ DHY+C++D+ SRAGR+
Sbjct: 471 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIE 530
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA I MP A +W LL +CR +G + + + A E++P N A+YVLL+ +YA
Sbjct: 531 EARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYA 590
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+ G G++ G SW+ Y
Sbjct: 591 AKGKWEEVARLRKDMRDKGLRKEPGCSWIKY 621
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QN AI ++R+M C V AL K++H Y IR D +
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L+E Y +C + ++ VF KM K+VV+W++++ Y +G ++ A++TF +M+
Sbjct: 311 FVASALVEMYCKCKNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G++PD T V+ +C++ ++ + R G+ + + LV + + G +
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS-GLISFITVSNALVTLYGKCGSI 427
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGE----LGLAE 255
+++ + + K W AL+ FG+ +GL E
Sbjct: 428 EDSHRLFNEISFKDEV-TWTALVSGYAQFGKANETIGLFE 466
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI RCG + +S +F +MR+ +D ++W+S+I+ + +G + A++ F+EM++ ++
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRE--RDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 272
Query: 165 PDGITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
D TF VL AC + Y R + + S LV++ + +
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA----SALVEMYCKCKNIKS 328
Query: 222 AYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE-----VEPEN 268
A V + M K +W A+L +G+ G +E A + ++ +EP++
Sbjct: 329 AEAVFKKMTCK-NVVSWTAMLVG---YGQNGYSEEAVKTFSDMQKYGIEPDD 376
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN S +A+ + M C N+A+L + H + + +
Sbjct: 353 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 412
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + L+ YG+CG + +S +F+++ KD V W++L+S YA G+A + F+ M
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISF--KDEVTWTALVSGYAQFGKANETIGLFESMLA 470
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G+KPD +TF+GVL ACS AG + F M ++G+ DHY+C++D+ SRAGR+
Sbjct: 471 HGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIE 530
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA I MP A +W LL +CR +G + + + A E++P N A+YVLL+ +YA
Sbjct: 531 EARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYA 590
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
+ G G++ G SW+ Y
Sbjct: 591 AKGKWEEVARLRKDMRDKGLRKEPGCSWIKY 621
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QN AI ++R+M C V AL K++H Y IR D +
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L+E Y +C + ++ VF KM K+VV+W++++ Y +G ++ A++TF +M+
Sbjct: 311 FVASALVEMYCKCKNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G++PD T V+ +C++ ++ + R G+ + + LV + + G +
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS-GLISFITVSNALVTLYGKCGSI 427
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGE----LGLAE 255
+++ + + K W AL+ FG+ +GL E
Sbjct: 428 EDSHRLFNEISFKDEV-TWTALVSGYAQFGKANETIGLFE 466
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI RCG + +S +F +MR+ +D ++W+S+I+ + +G + A++ F+EM++ ++
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRE--RDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 272
Query: 165 PDGITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
D TF VL AC + Y R + + S LV++ + +
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA----SALVEMYCKCKNIKS 328
Query: 222 AYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE-----VEPEN 268
A V + M K +W A+L +G+ G +E A + ++ +EP++
Sbjct: 329 AEAVFKKMTCK-NVVSWTAMLVG---YGQNGYSEEAVKTFSDMQKYGIEPDD 376
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 133/237 (56%), Gaps = 3/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL KEIH Y R+ + + +G+ LI+ Y +CG L VF++M M K+ +
Sbjct: 450 CTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQM--MVKNTI 507
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
++++ISA HG + L+ +++M AG+KP+ +TF+ +L ACSHAG D + M
Sbjct: 508 TYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSM 567
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
DYG++ +HYSC+VD++ R G L AY+ I MPV A G+LLGACR ++ L
Sbjct: 568 VNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLGACRLHNKVEL 627
Query: 254 A-EIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A ++ ++ E++ +YVLL+ +YAS G++ GSSW+
Sbjct: 628 ADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWI 684
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KE+H + ++ + +GS L++ Y CG + + ++F M DMD ++ W+SLI+ Y
Sbjct: 359 KEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMD--IMVWNSLIAGYN 416
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF---ADDALCYFTRMQRDYGVE 200
L G+ ++A TF+E+ +A +P+ IT + VL C+ G + CY TR +
Sbjct: 417 LVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNIS 476
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC--RNFGELGLAEIAG 258
+ L+D+ S+ G L +V M VK T + ++ AC GE GL
Sbjct: 477 VGNS----LIDMYSKCGFLELGVKVFNQMMVKNTI-TYNTMISACGAHGLGEKGLKFYEQ 531
Query: 259 RASAEVEPENAANYVLLA 276
A ++P LL+
Sbjct: 532 MNEAGMKPNKVTFISLLS 549
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 9/216 (4%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA-ALNLIKEIHGYGIRNDIDPHPQLGSGL 105
+A+ L+RKM C + L L +HG +R+ D + + +
Sbjct: 220 EAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAI 279
Query: 106 IEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKP 165
I+ Y +CG +C VFS M + +D+V+WS+LI+ Y+ +G K + E + M G+
Sbjct: 280 IDMYCKCGYPDEACLVFSYM--VFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTT 337
Query: 166 DGITFLGVLKACSHAGFADDA--LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
+ I VL A + F Q G+ S LVD+ + G + EA
Sbjct: 338 NEIVVSTVLPALGKLKLFKQGKEMHNFVLKQ---GLLTDVVVGSALVDMYANCGSIKEAE 394
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+ R M + + W +L+ G+ A R
Sbjct: 395 SIFRNM-LDMDIMVWNSLIAGYNLVGDFQSAFFTFR 429
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 148/284 (52%), Gaps = 3/284 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ +N +I+ A QN + ++R+M C +V ++ +E
Sbjct: 250 PDVVAWNALISGFA-QNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGRE 308
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HG+ R D + + S LI+ Y +CG L ++ NVF K++ K+V +W+++I +
Sbjct: 309 VHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQC--KNVASWNAMIDCFGKC 366
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G +ALE F +M+ G++P+ +TF +L ACSH+G + L FT M+ YGVE +H
Sbjct: 367 GMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEH 426
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+L R+G++ EAYE I+ MP++VT GA L C+ G LA+ ++
Sbjct: 427 YACIVDLLCRSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQ 486
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ ++V L+ +YA+ G V GSSW+
Sbjct: 487 LNGSGSFVTLSNIYAAEGDWEEAGNVRKVMKERNVNKWPGSSWL 530
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 25/262 (9%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXX 59
++ +Y+ D L +A LFH + PN FN +I + +G F A+ +R M
Sbjct: 56 LVGMYSSCTD-LKSATLLFHNIH-KPNVFAFNWMILGMVY--NGYFDNALFYFRLMRDIG 111
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGY----GIRNDIDPHPQLGSGLIEAYGRCGCL 115
CV + + K++HG G+ ND+ +G+GLI+ YG+CG +
Sbjct: 112 LIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDV----LIGNGLIDMYGKCGSV 167
Query: 116 VNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 175
+C VF M + +DV +W+S+I + G + AL F+ M+M G +P+ T+ ++
Sbjct: 168 DYACRVFDGMSE--RDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIA 225
Query: 176 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM------ 229
+ G + A + RMQ++ G ++ L+ ++ + E + V R M
Sbjct: 226 TYARLGDSKKAFGFMERMQKE-GFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGIC 284
Query: 230 PVKVTAKAWGALLGACRNFGEL 251
P +VT ALL AC + G +
Sbjct: 285 PNQVTI---AALLPACGSVGSV 303
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 3/234 (1%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A+L ++ H I+ D P + + L++ Y + G + + F + KD W
Sbjct: 557 NIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAF--ISTNWKDTACW 614
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I+ YA HGEA+ AL+ F++M M G+KP+ +TF+GVL ACSH G D +F M +
Sbjct: 615 NSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ 674
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+G+E +HY C+V +L RAG+L+EA E I MP+K A W +LL ACR G + L
Sbjct: 675 -FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGT 733
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A + P ++ +YVLL+ ++AS G GV G SW+
Sbjct: 734 YAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWI 787
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +YA D+L A ++F+LM + ++N +I + Q D +A+ L+R+M
Sbjct: 384 LIDMYAKC-DSLTDARKVFNLM-AAIDLVSYNAMIEGYSRQ-DKLCEALDLFREMRLSLS 440
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++ L L +IHG I+ + GS LI+ Y +C + ++
Sbjct: 441 SPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARL 500
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF +++D KD+V W+++ S Y E + +L+ +K ++M+ +KP+ TF V+ A S+
Sbjct: 501 VFEEIQD--KDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNI 558
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ ++ + G + + LVD+ +++G + EA++ K TA W +
Sbjct: 559 ASLRHGQQFHNQVIK-MGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTA-CWNS 616
Query: 241 LLGACRNFGE 250
++ GE
Sbjct: 617 MIATYAQHGE 626
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 12/230 (5%)
Query: 17 ELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
+LF M V N ++ +IA QN A+ L+ +M C +
Sbjct: 298 KLFDRM-VDKNVVSWTTVIAG-CMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGS 355
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ AL +++H Y I+ +ID + +GLI+ Y +C L ++ VF+ M + D+V+++
Sbjct: 356 LVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAI--DLVSYN 413
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITF---LGVLKACSHAGFADDALCYFTRM 193
++I Y+ + AL+ F+EM ++ P + F LGV + H ++ +
Sbjct: 414 AMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK- 472
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
YGV S L+DV S+ R+ +A V + K W A+
Sbjct: 473 ---YGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIV-VWTAMFS 518
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+ IIA + Q ++ L+ +M C+ + L K+IH Y
Sbjct: 209 TWTTIIAGYSKQGRSQV-SLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCY 267
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+R+ I + +G I+ Y +C + +F +M +DK+VV+W+++I+ + +
Sbjct: 268 VLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM--VDKNVVSWTTVIAGCMQNSFHR 325
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACS-----------HA----------GFADDALC 188
AL+ F EM G PD VL +C HA F + L
Sbjct: 326 DALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLI 385
Query: 189 -------YFTRMQRDYGVEASSD--HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA-- 237
T ++ + + A+ D Y+ +++ SR +L EA ++ R M + +++
Sbjct: 386 DMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLL 445
Query: 238 -WGALLGACRNFGELGLA 254
+ +LLG + L L+
Sbjct: 446 IFVSLLGVSASLYHLELS 463
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L + +H ++ ++ + +GS L++ YG+CG + N+ VFS++ + +++V
Sbjct: 320 CAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPE--RNLV 377
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA--GVKPDGITFLGVLKACSHAGFADDALCYFT 191
W+++I YA G+ AL F+EM + G++P +T + +L CS G + + F
Sbjct: 378 TWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFE 437
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ +YG+E ++H++C+VD+L R+G + AYE I+ M ++ T WGALLGACR G+
Sbjct: 438 SMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKT 497
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L +IA E++ ++ N+V+L+ M AS G G+K G SW+
Sbjct: 498 ELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWI 555
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 13/232 (5%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N +T+N I+ A Q+ S AI +++ CV++ LNL +++
Sbjct: 173 NLATWNAYISN-AVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQL 231
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H + +R + +GLI+ YG+CG +V++ VF+++ + K+VV+W S+++A +
Sbjct: 232 HAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGN-RKNVVSWCSMLAALVQNH 290
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
E + A F + V+P VL AC+ G + R V+A +
Sbjct: 291 EEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLE-----LGRSVHALAVKACVEDN 344
Query: 207 ----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
S LVD+ + G + A +V +P + W A++G + G++ +A
Sbjct: 345 IFVGSALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIGGYAHQGDIDMA 395
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI L+R+M C ++ AL+L + IH Y ++ + L + LI
Sbjct: 227 EAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLI 286
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG-VKP 165
+ Y + G + + +F M+ K ++ W+++I+ ALHG K AL F ME VKP
Sbjct: 287 DMYAKSGNIRKALELFENMKH--KTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKP 344
Query: 166 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV 225
+ +TF+ +L ACSH G + YFT M+ YG+E +HY C++D+L RAG L EA E+
Sbjct: 345 NEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEM 404
Query: 226 IRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXX 285
+ MP + A WG+LL A G+ LAE A R +EP + NY LL+ YAS+G
Sbjct: 405 VLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRW 464
Query: 286 XXXXXXXXXXXXXGVKSTTGSSWV 309
GV+ G S++
Sbjct: 465 NESRMVRKVMQDAGVEKVPGVSFI 488
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
+N II AL + N + A++++R + V + L K+IH
Sbjct: 80 VYNNIIYALYSSN--AKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCV 137
Query: 90 GIRNDIDPHPQLGSGLIEAY---------------GRCGCLVNSCNV------------- 121
G+ +D + + S LI+ Y G GC++N+ V
Sbjct: 138 GVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARK 197
Query: 122 -FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F M + DKDV +W+++IS Y A++ F+ M++ VKPD I L VL AC+
Sbjct: 198 LFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADL 257
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G +++ + + Y+ L+D+ +++G + +A E+ M K T W
Sbjct: 258 GALHLGEWIHNYIEK-HKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHK-TIITWTT 315
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPEN 268
++ GL + A R + +E E+
Sbjct: 316 MIAG---LALHGLGKEALRVFSCMEKED 340
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 140/270 (51%), Gaps = 2/270 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN +A+ L+ +M C ++A L+ ++ + I++ ++
Sbjct: 260 AQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDL 319
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + L+ Y +CG +V S F ++ D+V+W+++I+A+A HG A F M
Sbjct: 320 SVSNALVTMYSKCGEIVISELAFDQISH--PDIVSWNTIIAAFAQHGLYDRARYYFDHMV 377
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
AGV PDGITFL +L AC AG D+ + F M YG+ S+HYSC+VDV+SRAG+L
Sbjct: 378 TAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAGQL 437
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
A +VI+ MP + A WGA L C + L E+A R+ ++P N+ YV+++ +Y
Sbjct: 438 LRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLGELAARSILNLDPYNSGAYVMMSNIY 497
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A+ G G+K T SW+
Sbjct: 498 AAAGKWKDVNRMRVLMKEQGIKKQTAYSWM 527
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I + + G + + N+F ++R KD W+ +I+ +A +G + AL F +M G
Sbjct: 222 TAMITGFCKQGKIDEAWNLFQQIRC--KDRACWNIMITGFAQNGRGEEALNLFSQMVRTG 279
Query: 163 VKPDGITFLGVLKACSHAGFADD 185
++PD +TF+ + AC+ D+
Sbjct: 280 MQPDDLTFVSLFTACASLALLDE 302
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 1/267 (0%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+A++ KM C ++ AL + +H Y I N + L + L+
Sbjct: 229 EAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLV 288
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG + + VF + DV W+++I A HG + +L+ FKEM+MAG++ D
Sbjct: 289 DMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSD 348
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
IT+L +L AC+H G +A +F + + G+ +S+HY+C+VDVL+RAG+L AY+ I
Sbjct: 349 EITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFI 407
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXX 286
+P++ TA GA+ C N LAE GR E++P N Y+ L+ +YA V
Sbjct: 408 CQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWD 467
Query: 287 XXXXXXXXXXXXGVKSTTGSSWVVYSE 313
GVK + G S+V SE
Sbjct: 468 DSKSMREAMERRGVKKSPGFSFVEISE 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +++ Y +CG + + VF M++ +DV +WSS I Y GE + A+ F++M G
Sbjct: 184 NSMLDGYAKCGEMAMAQKVFESMQE--RDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVG 241
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE----ASSDHYSCLVDVLSRAGR 218
K + +T + VL AC+H G RM Y ++ + + LVD+ ++ G
Sbjct: 242 PKANEVTMVSVLSACAHLGALQKG-----RMMHQYIIDNLLPMTMVLQTSLVDMYAKCGA 296
Query: 219 LHEAYEVIRGMPVKVT-AKAWGALLGACRNFG 249
+ EA V RG+ T W A++G G
Sbjct: 297 IEEALFVFRGISKSQTDVFIWNAMIGGLATHG 328
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 143/281 (50%), Gaps = 24/281 (8%)
Query: 29 STFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
S F+ + N+ ++KA+ + RKM C +L + KEIH
Sbjct: 248 SLFSQMCRDGVETNEVTWKAMEMLRKMQNMGFKPNEITISSILQACYLSESLRMCKEIHY 307
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
Y R H ++ NVF + KDVVAW+++I+A A+HG
Sbjct: 308 YVFR-----HWKVW-----------------NVFDMI--AIKDVVAWTTMINANAMHGNG 343
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
K AL F++M ++ VKPD +TF+ VL +CSH+ ++ + F M +D+ VE ++ HYSC
Sbjct: 344 KEALFLFEKMLLSMVKPDSVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSC 403
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+ SRAGRL+EAYE I+ MP+ TA AW +LL CR + + LA+I+ + E+EP
Sbjct: 404 VVDIYSRAGRLNEAYEFIQRMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSR 463
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +YV L + + G+ T G SW+
Sbjct: 464 SRDYVALCNILVTAKLWSEASKIRMFMKESGITKTPGCSWL 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L K IHG+ +RN + + + + L+ Y +C C+ + +F M +DVV
Sbjct: 172 CADLKDLKSGKAIHGFAVRNGMVENVFVCNALVNLYAKCLCVREAHAIFDLMP--HRDVV 229
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF--LGVLKACSHAGFADDALCYFT 191
+WS +++ Y + E + L F +M GV+ + +T+ + +L+ + GF + + +
Sbjct: 230 SWSGVLT-YFTNKEYEKGLSLFSQMCRDGVETNEVTWKAMEMLRKMQNMGFKPNEITISS 288
Query: 192 RMQRDYGVEA 201
+Q Y E+
Sbjct: 289 ILQACYLSES 298
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 15/303 (4%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAA-QNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
+L L+LF M + ++N +I+ LA + DG +A ++R+M
Sbjct: 189 DLEIGLKLFKRMG-QRSVVSWNLMISCLAQRKKDG--EAFGIFREMLEQGFEPDDATLVT 245
Query: 70 XXXXCVNVAALNLIKEIHGYG-----IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSK 124
C + ++ + IH Y +R I +G+ L++ Y +CG L + VF++
Sbjct: 246 VLPVCARLGDVDAGEWIHSYADGKGLLRKVIS----VGNSLVDFYCKCGNLEAAWKVFNE 301
Query: 125 MRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 184
M K+VV+W+++IS L+G+ + +E F++M GV P TF+GVL C+HAGF D
Sbjct: 302 M--TKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVD 359
Query: 185 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
F M + + +HY C+VD+L R G + EAY++IR MP+ A WGALL A
Sbjct: 360 KGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSA 419
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTT 304
CR G+ +AEIA + +EP N+ NYVLL+ +YA G+K
Sbjct: 420 CRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNP 479
Query: 305 GSS 307
G S
Sbjct: 480 GQS 482
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 36/212 (16%)
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK- 156
H + GL+E Y CG + ++ VF +M + ++VV W+ +I+ + G+ + L+ FK
Sbjct: 142 HSPVEIGLLEVYSNCGKMEDANKVFDEM--LHREVVVWNIMINGFCKMGDLEIGLKLFKR 199
Query: 157 ------------------------------EMEMAGVKPDGITFLGVLKACSHAGFADDA 186
EM G +PD T + VL C+ G D
Sbjct: 200 MGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAG 259
Query: 187 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG--A 244
+ + + LVD + G L A++V M K +W A++
Sbjct: 260 EWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEM-TKKNVVSWNAMISGLG 318
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
GELG+ A V P ++ +LA
Sbjct: 319 LNGKGELGVELFEKMARKGVTPSDSTFVGVLA 350
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 45 SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSG 104
S +A+ L+R+M C ++ AL L K + Y + +I +L +
Sbjct: 209 SSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNA 268
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMD-KDVVAWSSLISAYALHGEAKAALETFKEMEMAGV 163
LI+ + +CG + + +F R MD + +V+W+S+I+ A+HG A+ F EM G+
Sbjct: 269 LIDMFAKCGNVDKAIKLF---RQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGI 325
Query: 164 KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
PD + F+GVL ACSH+G D YF M+R++ + +HY C+VD+L R G + EA+
Sbjct: 326 TPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAF 385
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
E ++ MP + W ++ AC GEL L E + + EP + +NYVLL+ +YA +
Sbjct: 386 EFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLR 445
Query: 284 XXXXXXXXXXXXXXXGVKSTTGSSWV 309
G+K GS+ +
Sbjct: 446 QWEKKTKVREMMDMRGMKKVPGSTMI 471
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 25 PPNEST-----------FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXX 73
PP+ +T FN +I A + D + YR M
Sbjct: 75 PPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKG 134
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSK--MRDMDK- 130
C + +L L K +HG ++ + + + LI Y C CL F++ D K
Sbjct: 135 CAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY--C-CLGEDGFEFAEKVFDDSPKM 191
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D V WS++I+ + G + A++ F+EM++ GV PD IT + VL AC+ G +
Sbjct: 192 DTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVE 251
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+ +++ + S + + L+D+ ++ G + +A ++ R M + T +W +++
Sbjct: 252 SYVEKK-NIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSR-TIVSWTSVIA 302
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 2/210 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + AL K IH Y +N I P LG LI+ Y +CG + + VFSK+ K V
Sbjct: 253 CAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEK--KCVY 310
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+++I +A+HG+ AL+ F +M+ AG+KP TF VL ACSH G ++ F M
Sbjct: 311 TWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESM 370
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y ++ +HY C+VD+L RAG L EA E + MP+K A WG+LL AC L L
Sbjct: 371 STFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLEL 430
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ G+ E++PE+ Y+ LA ++A+ G
Sbjct: 431 GKEIGKFLIELDPEHDGRYIHLASIHAAAG 460
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 36/249 (14%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN +N +I A + ND +A+ LY +M C ++AL +
Sbjct: 74 PNTVMWNTMIRAYSNSNDPE-EALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQ 132
Query: 86 IH------GYG-----------------------IRNDIDPHPQLGS--GLIEAYGRCGC 114
IH G+G + D+ P + S +I+ Y +CG
Sbjct: 133 IHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGN 192
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+ + +F M + K+V++W+S+I + G K AL ++M +AG+KPD IT L
Sbjct: 193 VEMAYKIFQAMPE--KNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSL 250
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
AC+ G + T + ++ ++ L+D+ + G + +A V + K
Sbjct: 251 SACAGLGALEQGKWIHTYIGKN-KIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCV 309
Query: 235 AKAWGALLG 243
W A++G
Sbjct: 310 Y-TWTAIIG 317
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 134/241 (55%), Gaps = 2/241 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
A++D +A+ L+ +M C +V AL IH Y R+
Sbjct: 330 AESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + LI+ Y +CG LV + VF M K+V++WSS+I+A+A+HG A +A++ F+ M+
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPR--KNVISWSSMINAFAMHGNADSAIKLFRRMK 447
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
++P+G+TF+GVL AC HAG ++ F+ M ++G+ + +HY C+VD+ RA L
Sbjct: 448 EVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFL 507
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
+A E+I MP WG+L+ AC+ GE L E A + E+EP++ V+L+ +Y
Sbjct: 508 RKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIY 567
Query: 280 A 280
A
Sbjct: 568 A 568
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N A++L ++I+ G+ + H + + ++ Y + G + ++ +F +M +++D+V W
Sbjct: 269 NCGAMDLARKIYD-GLSS---KHLIVSTAMLSGYAKLGMVKDARFIFDQM--IERDLVCW 322
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
S++IS YA + + AL+ F EM PD IT L V+ ACSH G A T + R
Sbjct: 323 SAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDR 382
Query: 196 D-YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+G S + + L+D+ ++ G L +A EV MP K +W +++ A G A
Sbjct: 383 SGFGRALSVN--NALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSA 439
Query: 255 EIAGRASAEVEPE-NAANYV 273
R EV E N ++
Sbjct: 440 IKLFRRMKEVNIEPNGVTFI 459
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
V+A N EIHG + P + +GLI Y C ++++ +F KM D VAW+
Sbjct: 134 VSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM--CHPDAVAWN 191
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY---FTRM 193
+I Y +G AL F++M + +KPD + VL AC HAG L Y
Sbjct: 192 MIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAG----NLSYGRTIHEF 247
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+D G S + L+++ + G + A ++ G+ K + L G + +LG+
Sbjct: 248 VKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG----YAKLGM 303
Query: 254 AEIA 257
+ A
Sbjct: 304 VKDA 307
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 154/300 (51%), Gaps = 5/300 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAA-LAAQNDGSFKAIALYRKMXXXXXXXXXXXXXX 69
+L AL +F + N ++N I++A L + +G + LY++M
Sbjct: 419 HLHDALNVFRDISRNANLVSWNAILSACLQKKQEG--ETFRLYKEMHFSGNKPDSITITT 476
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C + +L + ++H Y I++ + + +GLI+ Y +CG L ++ +VF +++D
Sbjct: 477 LLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLD 536
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
+V+WSSLI YA G AL F+ M GV+P+ +T+LG L ACSH G ++
Sbjct: 537 --IVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRL 594
Query: 190 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ M+ ++G+ + +H+SC+VD+L+RAG LHEA I+ + AW LL AC+
Sbjct: 595 YKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHN 654
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +AE +++P N+A V+L ++AS G GV+ G SW+
Sbjct: 655 NVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWI 714
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N +L+ K+IH + ++++ P L + +I YG+CG + ++ VF M+ +VV
Sbjct: 75 CANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQL--PNVV 132
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+IS Y+ +G+A A+ + +M +G PD +TF V+KAC AG D R
Sbjct: 133 SWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDID-----LGRQ 187
Query: 194 QRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ +++ H+ + L+ + + G++ A V +P K +WG ++
Sbjct: 188 LHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTK-DLISWGTMI 239
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L K++HG ++ + + G L + Y + G L ++ F ++++ D+V
Sbjct: 278 CSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKN--PDIV 335
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++I+A+A +G+A A++ F++M G+ PD IT++ +L C + R
Sbjct: 336 SWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQG-----RQ 390
Query: 194 QRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
Y V+ D + L+ + ++ LH+A V R + +W A+L AC
Sbjct: 391 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 446
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI++Y ++ A ++F M +P N ++ +I+ + QN + AI +Y +M
Sbjct: 106 MINMYGKC-GSMKDARKVFDTMQLP-NVVSWTSMISGYS-QNGQANDAIIMYIQMTRSGQ 162
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C ++L +++H + I++ H + LI Y G + ++ N
Sbjct: 163 FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASN 222
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKACS 178
VF+++ KD+++W ++I+ Y G AL F+++ G +P+ F V ACS
Sbjct: 223 VFTRIPT--KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACS 279
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 158/312 (50%), Gaps = 15/312 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXX 58
MIS YA D LP+A HL D P T +N +IA QN S KAI L+ +M
Sbjct: 343 MISAYARVGD-LPSAR---HLFDKMPQRDTVSWNSMIAGYT-QNGESVKAIKLFEEMISS 397
Query: 59 XXXX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
C ++ L L N I + + LI Y RCG + +
Sbjct: 398 EDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQD 457
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ +F +M +D+V++++LIS +A HG ++E +M+ G++PD IT++ +L AC
Sbjct: 458 AVLIFQEM--ATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTAC 515
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
SHAG + F ++ DHY+C++D+L RAGRL EA ++I+ MP++ A
Sbjct: 516 SHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGI 570
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXX 297
+G+LL A ++ L E+A +VEP N+ NYVLL+ +YAS G
Sbjct: 571 YGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRK 630
Query: 298 XGVKSTTGSSWV 309
GVK TTG SW+
Sbjct: 631 QGVKKTTGLSWL 642
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 24/244 (9%)
Query: 1 MISLYAH--SPDNLPTALELFHLM----DVPPNESTFNPIIAALAAQNDGSFKAIALYRK 54
M+S YA +P+ + LF+ M +V P+E+T+ +I++ ++ D ++ RK
Sbjct: 237 MLSGYAQGGAPEE---TIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE-SIVRK 292
Query: 55 MXXXX----XXXXXXXXXXXXXXCVNVAALNLIKEIHG-YGIRNDIDPHPQLGSGLIEAY 109
+ C N+ A + I E G Y R+ + + +I AY
Sbjct: 293 LDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVP-----WNAMISAY 347
Query: 110 GRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGI 168
R G L ++ ++F KM +D V+W+S+I+ Y +GE+ A++ F+EM KPD +
Sbjct: 348 ARVGDLPSARHLFDKMP--QRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEV 405
Query: 169 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRG 228
T + V AC H G + ++ ++ ++ S Y+ L+ + SR G + +A + +
Sbjct: 406 TMVSVFSACGHLGELGLGNWAVSILKENH-IQISISVYNSLISMYSRCGSMQDAVLIFQE 464
Query: 229 MPVK 232
M +
Sbjct: 465 MATR 468
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I + + G L + F KM + + VV+W++++S YA G + + F +M G
Sbjct: 204 TTMITGHAKKGNLKTARMYFDKMPE--RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPG 261
Query: 163 -VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--SCLVDVLSRAGRL 219
V+PD T++ V+ +CS G D L + D V +++ + L+D+ ++ G L
Sbjct: 262 NVQPDETTWVTVISSCSSLG--DPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNL 319
Query: 220 HEAYEVIRGMPVKV--TAKAWGALLGACRNFGEL 251
A+++ + V ++ W A++ A G+L
Sbjct: 320 EAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDL 353
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHGY R+ + + L++ YG+CG L + VF D K +
Sbjct: 253 CGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFE--MDQRKGLT 310
Query: 134 AWSSLISAYALHGEAKAALETFKEMEM--AGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+W+S+I+ YALHG+ + A+ F++M GV+PD +TF+G+L AC+H G + YF
Sbjct: 311 SWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFE 370
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M ++YG+E HY CL+D+L RAG+ EA +V++GM ++ WG+LL C+ G
Sbjct: 371 MMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRT 430
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE A + E++P N +LA +Y +G G SW+
Sbjct: 431 DLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWI 488
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA--- 161
L+ Y R G + VF +M +D+DV AW+++IS +G + F+EM A
Sbjct: 173 LVSGYLRVGDVEKGLMVFDEM--VDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGL 230
Query: 162 -------GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
G KP+ +T + VL AC H G + R +G S + LVD+
Sbjct: 231 GEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYR-HGFVVDSFVSNALVDMYG 289
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ G L A +V M + +W +++
Sbjct: 290 KCGSLELARKVFE-MDQRKGLTSWNSMI 316
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 3/290 (1%)
Query: 20 HLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAA 79
L V PN T+ +I+ LA QN ++A ++++M C N+A
Sbjct: 545 QLSGVTPNLITWTTMISGLA-QNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMAL 603
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
LN + IHGY +RN + Q+ + +I+ Y +CG L ++ VF + K++ ++++I
Sbjct: 604 LNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVF--IICSTKELPVYNAMI 661
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
SAYA HG++ AL F+E+ G+ PD ITF VL ACSH + L F M + +
Sbjct: 662 SAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQM 721
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGR 259
+ S HY CLV +L+ G+L EA +I MP A G+LL AC E LA +
Sbjct: 722 KPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAK 781
Query: 260 ASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+VEP N NYV L+ +YA++G G+K G SW+
Sbjct: 782 WLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWI 831
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 86 IHGYGIR--NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
IHG+ ++ N+ D + + L++ YG+CG L ++ VF +M + ++ V W+S+I Y
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 144 LHGEAKAALETFKEMEM-AGVKPDGITFLGVLKACSH-----AGFADDALCYFTRMQRDY 197
+G A+ F++M GV+P ++ G AC++ G AL + +Y
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNY 348
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ +S +++ S+ G + E V R M V W ++ + FG
Sbjct: 349 VLGSS------IMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFG 394
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++HG+ IRN+ + SG+++ Y +CG + + VF KD+V W+++++A A
Sbjct: 436 KKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVF-HFAGKKKDIVLWNTMLAACA 494
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G + AL+ F +M+M V P+ +++ ++ G +A F+ MQ GV +
Sbjct: 495 EKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-GVTPNL 553
Query: 204 DHYSCLVDVLSRAGRLHEA---YEVIRGMPVKVTAKAWGALLGACRNFGELG 252
++ ++ L++ G +EA ++ ++G ++ + + + L AC N L
Sbjct: 554 ITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLN 605
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 154/315 (48%), Gaps = 16/315 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALA-----AQNDGSFKAIALYRKM 55
MIS YA S L ALELF ES F + A A Q+ + A+ L+ +M
Sbjct: 183 MISGYARSGRKL-EALELF-------RESPFKNLYAWTALISGLVQSGNANDALYLFVEM 234
Query: 56 XXXXXXXXXXXXXXXXX-XCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGC 114
C N A L K++H I + + + L++ Y +C
Sbjct: 235 RREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSD 294
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+V + +F +MR KDVV+W+S+I A HG A+ AL + +M +AGVKP+ +TF+G++
Sbjct: 295 VVAAKYIFCEMRR--KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLI 352
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
ACSH G F M D+G+ S HY+CL+D+ SR+G L EA +IR MPVK
Sbjct: 353 YACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPD 412
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
W ALL AC++ G +A +++PE+ ++Y+LL+ +YA G
Sbjct: 413 EPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKL 472
Query: 295 XXXXGVKSTTGSSWV 309
VK G S V
Sbjct: 473 MAVKEVKKVPGYSCV 487
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H I++ ++ H LI+AYG+CG L ++ +F + D VAW++++SA
Sbjct: 28 KKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDH--VAWATVLSACN 85
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG-------------------FAD 184
L A + G++PD F ++KAC++ G F D
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 185 DAL------CYFTRMQRDYG-------VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPV 231
D + Y DYG E SS ++ ++ +R+GR EA E+ R P
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPF 205
Query: 232 KVTAKAWGALL 242
K AW AL+
Sbjct: 206 K-NLYAWTALI 215
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 2/234 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A + + K+IHG + D ++ + LI Y +CG + ++ F +M D K+ ++W
Sbjct: 700 NIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPD--KNEISW 757
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I+ Y+ HG AL+ F++M+ V P+ +TF+GVL ACSH G D+ + YF M
Sbjct: 758 NSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSE 817
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+ + +HY+C+VD+L R+G L A + MP++ A W LL AC + + E
Sbjct: 818 AHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGE 877
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A E+EP+++A YVL++ MYA G GVK G SWV
Sbjct: 878 FAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWV 931
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+++LY+ S NL +A ++FH M + ++N +I+ LA Q + +A+AL++KM
Sbjct: 325 LVTLYSRS-GNLSSAEQIFHCMS-QRDRVSYNSLISGLAQQGYIN-RALALFKKMNLDCQ 381
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C +V AL K+ H Y I+ + + L++ Y +C + +
Sbjct: 382 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 441
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F ++VV W+ ++ Y + + F +M++ G+ P+ T+ +LK C+
Sbjct: 442 FFLACE--TENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTL 499
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D T++ + G + + S L+D+ ++ G+L A ++ R + + +W A
Sbjct: 500 GATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTA 557
Query: 241 LL 242
++
Sbjct: 558 MI 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 16/260 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ LY D + TA E F L N +N ++ Q D K+ ++ +M
Sbjct: 426 LLDLYVKCSD-IKTAHEFF-LACETENVVLWNVMLVGYG-QLDNLNKSFQIFTQMQIEGI 482
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + A +L ++IH ++ + + S LI+ Y + G L ++
Sbjct: 483 VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALK 542
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F ++++ DVV+W+++I+ Y H + AL FKEM+ G+K D I F + AC A
Sbjct: 543 IFRRLKE--NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC--A 598
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYS---CLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
G AL ++ + SD S LV + +R G++ EAY + K +
Sbjct: 599 GI--QALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNV-S 655
Query: 238 WGALLGACRNFGELGLAEIA 257
W +L+ F + G E A
Sbjct: 656 WNSLVSG---FAQSGYFEEA 672
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+QN +A+ L+ +M C V K++HG ++
Sbjct: 260 SQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSET 319
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + L+ Y R G L ++ +F M D+ V+++SLIS A G AL FK+M
Sbjct: 320 YVCNALVTLYSRSGNLSSAEQIFHCMSQRDR--VSYNSLISGLAQQGYINRALALFKKMN 377
Query: 160 MAGVKPDGITFLGVLKACSHAG 181
+ KPD +T +L AC+ G
Sbjct: 378 LDCQKPDCVTVASLLSACASVG 399
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 1/210 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C L L K++H +R+ ++ + I+ Y +CGC+ ++ VF+ M+ +KD+V
Sbjct: 328 CAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMK-TEKDLV 386
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I + +HG + ++E F M G KPD TF+G+L AC+HAG ++ YF M
Sbjct: 387 SWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSM 446
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
QR YG+ +HY C+VD+L R G L EA+ ++R MP + A G LLGACR ++ L
Sbjct: 447 QRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKL 506
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
A + ++ P + N+ LL+ +YA G
Sbjct: 507 ATSVSKYLFKLVPSDPGNFSLLSNIYAQSG 536
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 10 DNLPTALELFHLMDVP-PNESTFNPIIAA--LAAQNDGSFKAIALYRKMXXXXXXXXXXX 66
+NL +A+ +F+ VP PN +N +I A L+ S A + KM
Sbjct: 68 NNLSSAVNVFN--QVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFT 125
Query: 67 XXXXXXXCVNVAA-LNLIKEIHGY----GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
C ++ L+L+K +H + G DI + + LI+ Y RCG + + V
Sbjct: 126 YPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDI----FVPNSLIDCYCRCGDVEMAMKV 181
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
FS M + +DVV+W+S++ +G+ AL+ F EM + D +++ +L + AG
Sbjct: 182 FSGMEE--RDVVSWNSMVGGLVKNGDLDGALKVFDEMP----ERDRVSWNTMLDGFTKAG 235
Query: 182 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
D A F RM E +S +V S+ G + A + PVK
Sbjct: 236 EMDKAFKLFERM-----AERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVK 281
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 122 FSKMRDMD-----------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 170
+SK DMD K++V W+++IS YA G+ K A+ EME +G++ D F
Sbjct: 262 YSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFF 321
Query: 171 LGVLKACSHAGFADDALCYFTRMQRDY---GVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
+ +L AC+ +G L +M + S+ + +D+ ++ G + +A+ V
Sbjct: 322 ISILAACAESGM----LGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFN 377
Query: 228 GMPVKVTAKAWGALL 242
GM + +W +++
Sbjct: 378 GMKTEKDLVSWNSMI 392
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
N IK+IH I+ + P + LI +Y L ++ NVF+++ D +V ++ LI
Sbjct: 36 NHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVP--DPNVHLYNYLIR 93
Query: 141 AYALHGEAKAALETFK---EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
AY+L G +L F +M + GV D T+ +LK C+ + +M +
Sbjct: 94 AYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCN----GSSSWLSLVKMVHAH 149
Query: 198 GVEASSDHY-----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
VE ++ + L+D R G + A +V GM + +W +++G G+L
Sbjct: 150 -VEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVV-SWNSMVGGLVKNGDL 206
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 2/234 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +A L ++ HG ++ I + + S LI+ Y +C C+ + +F K + ++ +
Sbjct: 165 CATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKC--LSRNTI 222
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++LIS Y HG+ L++F M +P+ +TFL VL ACSH G D+A YF M
Sbjct: 223 TWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSM 282
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
RDY + + HY+ +VD+L R+G+L EAYE + P K + WGALLGAC+ G+L L
Sbjct: 283 IRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKIHGDLDL 342
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
+IA + E E N YV+LA YAS G GV G S
Sbjct: 343 LKIASKKYFEFERVNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGYS 396
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+ IH + I P+ L L+ Y + GCL + +F+ + ++KD AW+++I+ Y
Sbjct: 74 RRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNL--VEKDSFAWNAMIAGYV 131
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
G + LETF EM A ++PD TF V +AC+
Sbjct: 132 QKGLEEVGLETFYEMRQASLRPDQYTFASVFRACA 166
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 146/282 (51%), Gaps = 5/282 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N I+A A QN + +AI+L+ M C ++ AL+L K++ Y
Sbjct: 287 TWNAAISAYA-QNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEY 345
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+ + + LI+ Y +CG L ++ VF+ M K+ +W+++ISA A HG+AK
Sbjct: 346 ATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPR--KNDASWNAMISALASHGKAK 403
Query: 150 AALETFKEM--EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS 207
AL F+ M E +P+ ITF+ +L AC HAG D+ F M +G+ +HYS
Sbjct: 404 EALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYS 463
Query: 208 CLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
C+VD+LSRAG L+EA++VI MP K GAL AC+ + + E + E++P
Sbjct: 464 CMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPS 523
Query: 268 NAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
N+ NY++ +K+Y ++ GV T G SW+
Sbjct: 524 NSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWI 565
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L + + G+ + + + +GS LI Y +CG LV+S +F M +D +
Sbjct: 229 CGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPS--RDFI 286
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++ ISAYA +G A A+ F M+ GV P+ +T VL AC+ G D +
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALD-----LGKQ 341
Query: 194 QRDYGVEASSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+Y H + L+D+ ++ G L A V MP K A +W A++ A + G
Sbjct: 342 MDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDA-SWNAMISALASHG 400
Query: 250 E 250
+
Sbjct: 401 K 401
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN+ FN ++ A + LY +M C N+ + + +
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
H + +D + ++ Y RCG + VF ++ +KD+V+W+SL+S YA
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEI--TEKDLVSWNSLLSGYAKL 196
Query: 146 GEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR-MQRDYGVEASS 203
G A+ A+E F + E +G +PD ++ + VL AC G D L + + G++ +S
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELG--DLELGRWVEGFVVERGMKVNS 254
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
S L+ + S+ G L + + GMP + W A + A + + G+A+ A
Sbjct: 255 YIGSALISMYSKCGELVSSRRIFDGMPSR-DFITWNAAISA---YAQNGMADEA 304
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++A L K++H Y + +D + S LI Y R G L + +F +++ D+V
Sbjct: 464 CGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKN--NDIV 521
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+++I+ YA HG ++ A+ F+ + G+ PD +TF+G+L AC+HAG D Y+ M
Sbjct: 522 SWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLM 581
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+Y + S +HY C++D+L RAGRL EA ++R MP W LL ACR+ G+L
Sbjct: 582 TNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDR 641
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A A + P +A ++ LA +Y++ G GV G SW+
Sbjct: 642 AIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWI 697
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 19/218 (8%)
Query: 16 LELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV 75
+ LF M P S N I+ + Q +A+ +++M C
Sbjct: 307 MRLFGKMSTPDVVSWTNLIMTYV--QMGDEERALDAFKRMRKSDVSPNEYTFASVISACA 364
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A ++IHG+ +R + + + +I Y +CG L + VF M KD+++W
Sbjct: 365 NLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGM--TRKDIISW 422
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD-------ALC 188
S++IS Y AK A M G KP+ VL C + ALC
Sbjct: 423 STIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALC 482
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
G++ + +S L+ + SR+G L EA ++
Sbjct: 483 --------IGLDHETMVHSALISMYSRSGNLQEASKIF 512
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K IH I+ + + + L Y +C +F KM DVV+W++LI Y
Sbjct: 272 KAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMST--PDVVSWTNLIMTYV 329
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
G+ + AL+ FK M + V P+ TF V+ AC++ R V+A S
Sbjct: 330 QMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALS 389
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
S ++ + S+ G L EA V GM K
Sbjct: 390 VSNS-IITLYSKCGLLQEASLVFDGMTRK 417
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 137/263 (52%), Gaps = 5/263 (1%)
Query: 20 HLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
HL D P ++ +N +I+ QN + AI+L+++M C +
Sbjct: 366 HLFDESPEKTVVAWNAMISGYT-QNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
+L+ K +H +++P+ + + L++ Y +CG + + +F M + K+ V W++
Sbjct: 425 GSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE--KNTVTWNT 482
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+I Y LHG AL+ + EM G P +TFL VL ACSHAG + F M Y
Sbjct: 483 MIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKY 542
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+E +HY+C+VD+L R+G+L +A E I+ MPV+ WG LLGAC + +A +A
Sbjct: 543 RIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLA 602
Query: 258 GRASAEVEPENAANYVLLAKMYA 280
E++P + YVLL+ +Y+
Sbjct: 603 SERLFELDPGSVGYYVLLSNIYS 625
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 136/286 (47%), Gaps = 40/286 (13%)
Query: 1 MISLYAHSPDNLPTALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
MIS YA S ++ ALELFH M + PNE T + +A+A
Sbjct: 420 MISGYAQS-EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIAT----------------- 461
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN 117
+ L K H Y I + L + LI+ Y +CG + +
Sbjct: 462 -------------------LGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINS 502
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+ F+++RD V W+++I A HG A LE F +M+ +KP+ ITF+GVL AC
Sbjct: 503 ALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSAC 562
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKA 237
HAG + F M+ Y VE HY C++D+L RAG L EA E+IR MP++
Sbjct: 563 CHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVI 622
Query: 238 WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
WG LL ACR G + + E A A + P + VLL+ +YA+ G
Sbjct: 623 WGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAG 668
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
G+++ ++ L +G I+ G + ++ F KM +DV +WS++IS YA K
Sbjct: 378 GVKDHLESWNALTAGFIKN----GMMDHALKTFDKMHV--RDVFSWSTMISGYAQSEHPK 431
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
ALE F +M G+KP+ +T + V A + G + M R + + + + L
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM-RSESIPFNDNLRAAL 490
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKA-WGALL 242
+D+ ++ G ++ A + + +V++ + W A++
Sbjct: 491 IDMYAKCGSINSALQFFNQIRDEVSSVSPWNAII 524
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 29/137 (21%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVN--------------SC 119
C +++ ++ ++IH + + + + + LI Y +CG + N SC
Sbjct: 63 CSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSC 122
Query: 120 NVF-------------SKMRDM--DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
N+ K+ D+ +K V+++++I + +G + ALE FK+M GV
Sbjct: 123 NIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVV 182
Query: 165 PDGITFLGVLKACSHAG 181
P+ +T + V+ ACSH G
Sbjct: 183 PNDLTLVNVISACSHLG 199
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 150/273 (54%), Gaps = 7/273 (2%)
Query: 15 ALELFHLMD----VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
AL+LF ++ N +++N +I+ Q+ KA+ ++R M
Sbjct: 474 ALDLFKSIEKDGKTKRNAASWNSLISGFV-QSGQKDKALQIFRNMQFCHILPNSVTILSI 532
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C N+ A +KEIH + +R + + + LI++Y + G L+ S N+F+++ K
Sbjct: 533 LPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSW--K 590
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D V+W+S++S+Y LHG +++AL+ F +M G++P+ TF +L A HAG D+ F
Sbjct: 591 DAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVF 650
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ + +DY V +HYS +V +L R+G+L EA + I+ MP++ + WGALL ACR
Sbjct: 651 SCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRN 710
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
G+A +AG+ E EP N LL++ Y+ G
Sbjct: 711 FGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCG 743
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 15 ALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A++L M+ + P+ T+ +I+ + S A+ L ++M
Sbjct: 303 AIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRIS-HALDLLKEMFLAGVEANNITIASAA 361
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + +L++ EIH ++ ++ + +G+ LI+ Y +CG L + ++F M + +D
Sbjct: 362 SACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSE--RD 419
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
V +W+S+I Y G A E F +M+ + P+ IT+ ++ +G D AL F
Sbjct: 420 VYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFK 479
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
+++D + ++ ++ L+ ++G+ +A ++ R M
Sbjct: 480 SIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNM 517
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++S+YA L A ++F+ M V N T++ +I ++N + + L+ M
Sbjct: 123 LVSMYAKC-GLLGMARKVFNEMSVR-NLFTWSAMIGG-CSRNKSWGEVVGLFYAMMRDGV 179
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C L + IH IR + L + ++ Y +CG + +
Sbjct: 180 LPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F M + +D VAW+++IS + +GE A + F M+ GV+P +T+ ++ +
Sbjct: 240 IFDCMDE--RDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQL 297
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
G D A+ +M+ +G+ ++ ++ ++ GR+ A ++++ M
Sbjct: 298 GHCDLAIDLMRKMEW-FGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 12/214 (5%)
Query: 74 CVNVAALNLIKEIHG-YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C++ + + KE+H G+ +++P + + L+ Y +CG L + VF++M +++
Sbjct: 93 CIDKDCIFIGKELHSRIGLVENVNPFVE--TKLVSMYAKCGLLGMARKVFNEMS--VRNL 148
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
WS++I + + + F M GV PD VL+AC + +
Sbjct: 149 FTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSM 208
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRNFGEL 251
+ R G+ S + ++ V ++ G + A ++ M + + AW A++ G C+N GE+
Sbjct: 209 VIRR-GMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSV-AWNAMISGFCQN-GEI 265
Query: 252 GLAEIAGRASAE--VEPENAANYVLLAKMYASVG 283
G A+ A + VEP + + +L Y +G
Sbjct: 266 GQAQKYFDAMQKDGVEP-SLVTWNILISCYNQLG 298
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 2/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IH ++ + + LI Y +CG + VF+ M D + V+ W+S+I+ +A
Sbjct: 487 EQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN--VITWTSIINGFA 544
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG A ALE F M GVKP+ +T++ VL ACSH G D+A +FT M+ ++G+
Sbjct: 545 KHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRM 604
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY+C+VD+L R+G L EA E I MP A W LG+CR L E A + E
Sbjct: 605 EHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILE 664
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
EP + A Y+LL+ +YA+ G + GSSW+
Sbjct: 665 REPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWI 710
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+L KE+H + IR+ + +G L++ Y +CG + + VF MR + +V+
Sbjct: 272 CAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR--EHNVM 329
Query: 134 AWSSLISAYALHGEA--KAALETFKEMEM-AGVKPDGITFLGVLKACS 178
+W++L++ Y G + A+ F M + GV P+ TF GVLKAC+
Sbjct: 330 SWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+ +L K +H +++ L + LI Y + + + ++F M + +DVV
Sbjct: 62 CIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVV 121
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYF 190
++SS+IS +A + A+E F ++ + GV P+ F V++AC GF LC F
Sbjct: 122 SYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLF 179
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +VA L E+H +R ++ +GS L++ Y +CG + + F M +++
Sbjct: 654 CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPV--RNIY 711
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+IS YA HG + AL+ F M+ G PD +TF+GVL ACSH G D+ +F M
Sbjct: 712 SWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSM 771
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC--RNFGEL 251
YG+ +H+SC+VD+L RAG + + + I+ MP+ W +LGAC N
Sbjct: 772 GEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNT 831
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
L + A + E+EP+NA NYVLL+ M+A+ G VK G SWV
Sbjct: 832 ELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWV 889
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+++LYA + D++ ++F M ++ ++N I ALA +A+ + +M
Sbjct: 481 LLTLYAET-DSINECQKVFFQMP-EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGW 538
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+ + L L +IH ++ + + + L+ YG+C + +
Sbjct: 539 RPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEI 598
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+FS+M + +D V+W+S+IS Y G A++ M G K DG TF VL AC+
Sbjct: 599 IFSRMSE-RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASV 657
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ + R +E+ S LVD+ ++ G++ A MPV+ +W +
Sbjct: 658 ATLERGMEVHACAVRA-CLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNS 715
Query: 241 LL 242
++
Sbjct: 716 MI 717
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 84 KEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+E+H Y R+ +D +G+ L+ YG+C + N+C+VF M KD V+W+S+IS
Sbjct: 358 QEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS--KDTVSWNSMISGL 415
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD---YGV 199
+ + A+ F M+ G+ P + + L +CS G+ L ++ + +G+
Sbjct: 416 DHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGW----LTLGRQIHGEGFKWGL 471
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + L+ + + ++E +V MP + +W + +GA
Sbjct: 472 DLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 515
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 135/260 (51%), Gaps = 5/260 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P ++N +I+ L+ Q + AI ++ M C ++ L L +
Sbjct: 161 PKLGSWNALISGLS-QGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQ 219
Query: 86 IHGYGIRNDIDPHP--QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+H Y + + + + LI+ YG+CG + + VF+ M D ++V +W+S+I YA
Sbjct: 220 LHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMED--RNVSSWTSMIVGYA 277
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+HG AK AL F M +GVKP+ +TF+GVL AC H G + YF M+ YG+
Sbjct: 278 MHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQL 337
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY C+VD+L RAG +A ++ MP+K + WG L+GAC G + +AE
Sbjct: 338 QHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQA 397
Query: 264 VEPENAANYVLLAKMYASVG 283
+EP N YV+L+ +YA+ G
Sbjct: 398 LEPWNEGVYVVLSNIYANKG 417
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
A+ L +++H YGI+ + + SG I Y + G ++ VF + + + + +W++L
Sbjct: 112 AIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDE--NHEPKLGSWNAL 169
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
IS + G A A+ F +M+ G +PDGIT + V+ AC G Y Y
Sbjct: 170 ISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGD-----LYLALQLHKYV 224
Query: 199 VEASSDHYSC------LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+A ++ ++ L+D+ + GR+ AYEV M + +W +++
Sbjct: 225 FQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDR-NVSSWTSMI 273
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 1/230 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H + I+ + + + L + LI+ Y +CG L + VF KD + WSS+ISAY
Sbjct: 359 KQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDN-GSYSKDAITWSSIISAYG 417
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
LHG+ + AL T+ EM G+KPD IT +GVL AC +G D+ + + + +Y ++ S
Sbjct: 418 LHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSV 477
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+ C+VD+L R+G+L +A + IR MP+ WG+LL A G ++A R E
Sbjct: 478 EICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLE 537
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSE 313
+EPEN +NY+ L+ YAS G++ G SW+ S+
Sbjct: 538 LEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISD 587
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIA----LYRKMXXXXXXXXXXXXXXXXXXCVNV-AALN 81
N +FN II+ AA + + A +R+M C + +
Sbjct: 191 NVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFD 250
Query: 82 LIKEIHGYGIRNDID----PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
+E+H Y ++N +D +GS LI+ Y R LV S VF +M+ +++ W++
Sbjct: 251 HGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKS--RNIYVWTA 308
Query: 138 LISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACS-HAGFADDALCYFTRMQR 195
+I+ Y +G + AL F+EM+ ++P+ ++ + VL AC G + ++
Sbjct: 309 MINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKM 368
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ S + L+D+ ++ G L A V A W +++ A
Sbjct: 369 EFNDYISLRN--ALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISA 415
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN A+ L+R M ++A+L+ K++H IR
Sbjct: 385 AQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSV 444
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+G+ LI Y + GC+ ++ VF+++ ++D + W+S+I A A HG A+E F++M
Sbjct: 445 SVGNALITMYSKSGCIKDARKVFNQIC-TERDTLTWTSMIIALAQHGLGNEAIELFEDML 503
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
+KPD IT++GVL AC+H G + YF M+ + +E + HY+C++D+ RAG +
Sbjct: 504 KFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLI 563
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
EAY I+ MP++ AWG+LL ACR + LA++A ++P N+ Y LA +
Sbjct: 564 EEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTH 623
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ G VK G SWV
Sbjct: 624 SACGEWEEAAKVRKLMRDREVKKEQGFSWV 653
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MIS++ S AL LF M + ++N IIA Q S KA+ + M
Sbjct: 214 MISMHMQS-GRFDVALALFDQM-TDRDIISWNSIIAGYCHQGYDS-KALETFSDMFRSSS 270
Query: 61 XX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCL---- 115
C N+ +L L K+IH Y +R DID +G+ LI Y + G +
Sbjct: 271 LKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVAR 330
Query: 116 -------VNSCNV---------FSKMRDMD-----------KDVVAWSSLISAYALHGEA 148
++ NV + K+ D++ +DVVAW+++I YA +
Sbjct: 331 TIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLL 390
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
K ALE F+ M G +P+ T VL S D R V + S +
Sbjct: 391 KDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVG-NA 449
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
L+ + S++G + +A +V + + W +++ A G
Sbjct: 450 LITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHG 490
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 3/291 (1%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
+ PN ++ +I+ +QN+ A+ ++ +M C + L
Sbjct: 526 ITPNVVSWTALISG-CSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKG 584
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+E+H + ++ + + LI+ Y G L + NVF+K+++ K + W+ ++ YA
Sbjct: 585 EELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQE--KTLPCWNCMMMGYA 642
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+H + + + +M ++PD ITF +L AC ++G D+ YF MQ DY + +
Sbjct: 643 IHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTI 702
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HY C+VD+L ++G L EA I MP+K A WGALL +C+ + LAEIA R +
Sbjct: 703 EHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFK 762
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSES 314
+EP N+ANYVL+ +Y+S+ +K SW ++S
Sbjct: 763 MEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVWSWTQVNQS 813
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIAL-YRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
+ P+ T+N I++ + GSF+ + +R + + + L
Sbjct: 355 IKPDIITWNSILSGYLLR--GSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKL 412
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
KEIHGY +R++++ + + L++ Y + CL + V + ++ K+V AW+SLIS Y
Sbjct: 413 GKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKN--KNVCAWNSLISGY 470
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+ G+ A++ +M G+ PD +T+ G++ S G D+AL R++ G+ +
Sbjct: 471 SFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSS-GITPN 529
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMP---VKVTAKAWGALLGAC 245
++ L+ S+ + +A ++ M VK + +LL AC
Sbjct: 530 VVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCAC 575
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
++ A ++FH + P E I +++ A+ L+ M
Sbjct: 204 SIDKANQVFH--ETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKM 261
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + ALN K++HGY +R + + + + +I Y R + VF M D +
Sbjct: 262 LQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSR 321
Query: 131 DVVAWSSLISAYALHGEAKAALETFKE-MEMAGVKPDGITFLGVL 174
++ +W+S+I +YA+ G AL+T + ME +G+KPD IT+ +L
Sbjct: 322 NLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSIL 366
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 9/309 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y D + +A ++F + N T+N +I+AL+ N S +A+ L+R +
Sbjct: 463 LITMYDRCRD-INSARKVFKFHSIS-NLCTWNCMISALS-HNKESREALELFRHLQFKPN 519
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + L K++HGY R + + + L++ Y CG L N+
Sbjct: 520 EFTIVSVLSA---CTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVK 576
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF R K AW+S+I+AY HG + A+E F EM G+K TF+ +L ACSH+
Sbjct: 577 VF---RHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHS 633
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + L Y+ M YG++ ++H +V++L+R+GR+ EAY+ +G+ ++ WG
Sbjct: 634 GLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGM 693
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL C GEL L + E+EP+N Y+ LA MY + G G+
Sbjct: 694 LLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGL 753
Query: 301 KSTTGSSWV 309
+ G S +
Sbjct: 754 RKCAGYSLI 762
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 84 KEIHGYGIRNDIDP-HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+ IHGY IR + P H L +GLI+ Y +C + + +F +D +V+W+++IS Y
Sbjct: 237 RTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQID--LVSWNAMISGY 294
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
+ + + A FKE+ G T +L +C+ A + F + + +++
Sbjct: 295 SQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLN-----FGKSVHIWQLKSG 349
Query: 203 SDHYSCLVDVLSR----AGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
+++ LV+ L + +G L + +++ +W ++ C
Sbjct: 350 FLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGC 396
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 6/287 (2%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
V ++S+++ II QN KA+ L ++M C + ++
Sbjct: 474 VRKDDSSWSSIIGT-CKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEG 532
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H + I++ +GS +I+ Y +CG + S VF + + + V ++++IS YA
Sbjct: 533 KQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDE--QLKPNEVTFNAIISGYA 590
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG+A+ A+E ++E GV P+ +TFL ++ ACSHAG+ ++ FT M Y ++ S
Sbjct: 591 HHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKS 650
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
+HYSCLVD RAGRL EAY++++ + AW LL ACRN + E + E
Sbjct: 651 EHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGEKSAMKMIE 707
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+ P + A Y+LL+ +Y G VK G+SW++
Sbjct: 708 LNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWLI 754
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXX 58
++S Y+ S N A +LF D PN + T+ +I++ S KA ++ M
Sbjct: 48 LLSFYSKSS-NFHYAHKLF---DKMPNRNVVTWTTLISSHLKYGSVS-KAFEMFNHMRVS 102
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGC-LVN 117
C N ++ +IHG +R ++ GS L+ Y + G L +
Sbjct: 103 DERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRD 162
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKA 176
+ VF + +++DVVAW+ +IS +A +G+ + F EM E G+KPD ITF +LK
Sbjct: 163 ALRVFYGL--LERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKC 220
Query: 177 CS 178
CS
Sbjct: 221 CS 222
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M+ LYA D + + ++F M+ N ++ +I+ N G +A+ ++ M
Sbjct: 249 MVDLYAKCRD-VSSCRKIFDSMEKKDN-FVWSSMISGYTMNNRGE-EAVNFFKDMCRQRV 305
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
CV + LN ++HG I+N + S L+ Y G L +
Sbjct: 306 KLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEK 365
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEA-KAALETFKEMEMAG-VKPDGITFLGVLKACS 178
+FS++ DKD+VAW+S+I A A G+ ++ F+E+ ++ G T + VLK+C
Sbjct: 366 LFSRID--DKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCE 423
Query: 179 -----------HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
H+ +LC T + + LV + S ++ +A++
Sbjct: 424 KDSDLPAGRQIHSLIVKSSLCRHTLVG------------NALVHMYSECKQIDDAFKAFV 471
Query: 228 GMPVKVTAKAWGALLGACRN 247
+ V+ +W +++G C+
Sbjct: 472 DI-VRKDDSSWSSIIGTCKQ 490
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIA-LYRKMXXXX 59
++ +Y D+L AL +F+ + + + +N +I+ A +G F+ + L+ +M
Sbjct: 149 LVYMYLKGGDDLRDALRVFYGL-LERDVVAWNVMISGFA--QNGDFRMVQRLFSEMWEEQ 205
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C +V LN + +IHG + + + S +++ Y +C + +
Sbjct: 206 GLKPDRITFASLLKCCSV--LNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCR 263
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 177
+F M KD WSS+IS Y ++ + A+ FK+M VK D LKAC
Sbjct: 264 KIFDSMEK--KDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKAC 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N L +IH I L + L+ Y + + +F KM + ++VV W
Sbjct: 19 NPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPN--RNVVTW 76
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
++LIS++ +G A E F M ++ +P+ TF +L+AC++ L + R
Sbjct: 77 TTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVR 136
Query: 196 DYGVEASSDHYSCLVDVLSRAG-RLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
G+E S LV + + G L +A V G+ ++ AW ++ F + G
Sbjct: 137 -CGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGL-LERDVVAWNVMISG---FAQNGDF 191
Query: 255 EIAGRASAEVEPEN 268
+ R +E+ E
Sbjct: 192 RMVQRLFSEMWEEQ 205
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M++ + + D L A +LFH M N T+ ++ Q+ S +A+ L+ KM
Sbjct: 225 MVTGFIQNGD-LNRAEKLFHAMP-KKNVITWTAMMTGYV-QHGLSEEALKLFNKMQANDG 281
Query: 61 XX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++A L ++IH + + S LI Y +CG +
Sbjct: 282 LKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAK 341
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+F D++AW+ +I+AYA HG A+ F +M+ G + + +T++G+L ACSH
Sbjct: 342 KMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSH 401
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG D+ YF + ++ ++ DHY+CL+D+ RAGRL EA +I G+ +V+ WG
Sbjct: 402 AGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWG 461
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
ALL C G + + ++EPENA Y+L + MYASVG G
Sbjct: 462 ALLAGCSVHGNADIGRLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKDKG 521
Query: 300 VKSTTGSSWV 309
+K G SW+
Sbjct: 522 LKKQPGCSWI 531
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
LI E R D + + + ++ Y + + + +F++M ++VV+W+++I
Sbjct: 47 LINEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPV--RNVVSWNTMIDG 104
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
YA +G + A++ F M V +++ V+ A +H G DDA F M+ E
Sbjct: 105 YARNGRTQEAMDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEMR-----ER 155
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ +V LS+ GR+ +A +V MP++ +W A++
Sbjct: 156 DVVSWTTMVAGLSKNGRVDDARDVFDRMPIR-NVVSWNAMI 195
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 8/265 (3%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY---GIRNDIDPHPQLGS 103
+A+AL+ M C + AL+L K +H Y +RN + L +
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS--SNASLWT 404
Query: 104 GLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV 163
LI+ Y +CGC+ + VF M +++ +W++++S +A+HG A+ AL F EM G+
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHS--RNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 164 -KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+PD ITF+GVL AC+ AG D YF M +DYG+ HY C++D+L+RA + EA
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASV 282
+++ M ++ WG+LL AC+ G + E ++EPENA +VLL+ +YA
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Query: 283 GXXXXXXXXXXXXXXXGVKSTTGSS 307
G G+K G +
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCT 607
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI + +M C + + L K I + N + QL + LI
Sbjct: 246 EAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALI 305
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y +CG + +F + + KDV++W+++I Y+ + AL F+ M + VKP+
Sbjct: 306 DMYCKCGETDIARELFDGIEE--KDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPN 363
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+TFLG+L AC+ G D + ++ +++ ++ L+D+ ++ G + A V
Sbjct: 364 DVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVF 423
Query: 227 RGMPVKVTAKAWGALL 242
R M + A +W A+L
Sbjct: 424 RSMHSRNLA-SWNAML 438
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI Y GCL ++ +F ++ KDVV+W+++IS Y G + A+ F EM+ A
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPV--KDVVSWNAMISGYVQSGRFEEAIVCFYEMQEAN 258
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V P+ T + VL AC H + + RD G ++ + L+D+ + G A
Sbjct: 259 VLPNKSTMVVVLSACGHTRSGELGK-WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 223 YEVIRGMPVKVTAKAWGALLG 243
E+ G+ K +W ++G
Sbjct: 318 RELFDGIEEK-DVISWNTMIG 337
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 2/210 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + A K IH Y N ++ +LG+ LI+ Y +CG + ++ VF KM + KDV
Sbjct: 252 CTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKM--LVKDVA 309
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WS++I A++G K ALE F++ME G KP+ +TF+GVL AC+H ++ F M
Sbjct: 310 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIM 369
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y + S +HY C+VD+L+R+G++ +A I M ++ WG+LL C G L
Sbjct: 370 SEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYEL 429
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ G+ E +PE++ YVLLA MYA++G
Sbjct: 430 GQKVGKYLIEFDPEHSGRYVLLANMYANMG 459
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AA ++I GY ++ + + + I Y + G + ++ N F + DVV
Sbjct: 366 CADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK--PDVV 423
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS +I +YA HG AK +L F+ M ++G+ P+ IT LGVL ACSH G D+ L Y+ M
Sbjct: 424 SWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETM 483
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++DYG+ A+ H +C+VD+L RAGRL EA I + W ALLGAC+ + +
Sbjct: 484 KKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEM 543
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ E+EP AA+YVLL +Y VG GVK G SW+
Sbjct: 544 GKRIADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWI 599
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG+GI+ +D + + + L++ Y + GCL ++ VF K+ ++++I+ +
Sbjct: 170 IHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRG 229
Query: 146 G----EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
G A+ A+ F EM GVK TF V+KAC G + ++ ++ +E
Sbjct: 230 GLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKN-SLEG 288
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
S LVD+ S G + + P K+ +W + + C G+
Sbjct: 289 DEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSWTSAIAGCVKNGKF 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C L L + IH + N ++ + LI Y +C + S +F KD
Sbjct: 51 CAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDN--SSIKDN 108
Query: 133 VAWSSLISAYALHGEAKAALETFK---EMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
V+W+S+ISAYA G + E F+ M G T VL AC F D C+
Sbjct: 109 VSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACC---FCVDDNCF 165
Query: 190 FTRMQRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ R+ +G++ D + L+D+ +++G L +A V G +K
Sbjct: 166 YGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLK 212
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++Y+ D L A LF +D T+N +++ A D S + L R+M
Sbjct: 369 LITMYSRCRD-LNHAYLLFRKID-EKGLITWNAMLSGFA-HMDRSEEVSFLLREMLREGV 425
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND--IDPHPQLGSGLIEAYGRCGCLVNS 118
C +A L KE H Y ++ + + L + L+E Y R G ++ +
Sbjct: 426 EPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEA 485
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF + KD V ++S+I Y + G+ + AL+ F EM +KPD +T + VL ACS
Sbjct: 486 RKVFDSLSR--KDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACS 543
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
H+G F +M YG++ +HYSC+VD+ RAG L +A EVI GM K T+ W
Sbjct: 544 HSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIW 603
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
L+GAC+ G + E A E++P+++ Y+L+A MYA+
Sbjct: 604 ATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDS 663
Query: 299 GVKSTTGSSWV 309
G K T G +WV
Sbjct: 664 GAKRTPGCAWV 674
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ A+ L KEIHG+ +R D + + LI Y RC L ++ +F K+ +K ++
Sbjct: 338 CSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKID--EKGLI 395
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYF 190
W++++S +A ++ +EM GV+P+ +T +L C+ + CY
Sbjct: 396 TWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYM 455
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ + + + ++ LV++ SR+G++ EA +V + K ++G +G
Sbjct: 456 VKREEQF--KGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMG----YGV 509
Query: 251 LGLAEIAGRASAEVEPEN 268
G E A + AE+ N
Sbjct: 510 SGDGETALKLFAEMRRLN 527
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ +L+ K+IH + I I +P L S LI Y L ++ V D +
Sbjct: 102 CTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDP--L 159
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+ +IS Y + + A+ ++ M GV PD T+ VLKAC D + +
Sbjct: 160 HWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAI 219
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
Q + ++ S ++ LV + R G+L A E+ MP +
Sbjct: 220 Q-ESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPAR 257
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 123/244 (50%), Gaps = 8/244 (3%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND---ID 96
+N S K + L+R M C + L + + IH + R ID
Sbjct: 153 VENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKID 212
Query: 97 PHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK 156
H L + LI Y +CG + N+ +F R+ KDV W+S+I +A+HGEA+ AL+ F
Sbjct: 213 LH--LNNALINMYAKCGDIGNARKLFDNTRN--KDVTTWTSMIVGHAVHGEAREALQLFS 268
Query: 157 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 216
EM V P+ +TF+GVL ACSHAG ++ F M DYG+E H+ C+VD+ R+
Sbjct: 269 EMNFI-VSPNDVTFIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRS 327
Query: 217 GRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
G L EAY+ I MPV A W LLGAC G L LA ++P + V L+
Sbjct: 328 GHLREAYDFIMEMPVPPNAVMWRTLLGACSLHGNLKLATEVRDKLINLDPGYVGDSVALS 387
Query: 277 KMYA 280
+YA
Sbjct: 388 NIYA 391
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H I+ + QL + L++ Y G L ++ VF ++ + K+++ W+SLISAY
Sbjct: 96 KQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPE--KNIICWTSLISAYV 153
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ ++ LE F+ M M V+PD I L AC+ AG + ++R G++
Sbjct: 154 ENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDL 213
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ L+++ ++ G + A ++ K W +++
Sbjct: 214 HLNNALINMYAKCGDIGNARKLFDNTRNK-DVTTWTSMI 251
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V A K IH Y N ++ +LG+ LI+ Y +CG + + VF+KM KDV
Sbjct: 232 CTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPV--KDVA 289
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WS++I A++G K ALE F++ME G KP+ +TF+GVL AC+H ++ F M
Sbjct: 290 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIM 349
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Y + S +HY C+VDVL+R+G++ +A I M ++ WG+LL C G L
Sbjct: 350 SEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYEL 409
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ G+ E EP+++ YVLLA MYA++G GV +G S++
Sbjct: 410 GQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFI 465
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-- 160
+ L+ Y CG + + +VF KM ++ ++S+++S Y +G ++ F+E++
Sbjct: 155 TSLVSGYCSCGLVNEARDVFDKMP--LRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKD 212
Query: 161 ---AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
A +K +G + VL AC+ G ++ + ++ + G+E + + L+D + G
Sbjct: 213 KGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEEN-GLEYDLELGTALIDFYMKCG 271
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALL 242
+ A +V MPVK A W A++
Sbjct: 272 WVKGAEKVFNKMPVKDVA-TWSAMI 295
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 2/261 (0%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
KAI L+R + + L+ IKE+H + R + + LI
Sbjct: 424 KAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLI 483
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +CG L + +F +M ++ + +W+++I AYA+HG LE F M+ V PD
Sbjct: 484 TTYAKCGKLCTARYIFQQM--TERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPD 541
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+TF +L ACSH+G ++ L F M ++Y + + HYSC+VD+LSRAGRL EAY ++
Sbjct: 542 EVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLV 601
Query: 227 RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXX 286
+ MP ++ A ALL ACR +G+ + E G+ ++EP ++ Y L++ + A G
Sbjct: 602 KSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILKLEPHSSGPYALVSNICAQGGRWD 661
Query: 287 XXXXXXXXXXXXGVKSTTGSS 307
KST G S
Sbjct: 662 EVAQIRAMTKNTEFKSTPGYS 682
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
+N +A+ ++R+M + + L++ IHGY +R+ H +
Sbjct: 317 ENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVE 376
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ + +I AY + G +V++ VF++MR +D+V+W+S+I Y HG A+ F+ ++
Sbjct: 377 IANQIIHAYAKFGYVVDAREVFNRMRT--RDLVSWTSMIKGYVYHGHIDKAIILFRLLQR 434
Query: 161 AGVKPDGITFLGVLKACSHAG---FADDALCYFTRM--QRDYGVEASSDHYSCLVDVLSR 215
+ D +T +G+L+A S G F + C+ R +D V S L+ ++
Sbjct: 435 EHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNS------LITTYAK 488
Query: 216 AGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
G+L A + + M + +W A++GA
Sbjct: 489 CGKLCTARYIFQQMTERCLT-SWNAMIGA 516
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 84 KEIHGYGIRNDIDPHPQL-GSGLIEAYGRCGCLVNSCNVFSKM--RDMDKDVVAWSSLIS 140
+ +HGY +R +I + + L++ Y +CG + + +VF+KM R M K V +W++LI+
Sbjct: 155 QAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTK-VGSWNALIA 213
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC---YFTRMQRDY 197
Y +G+A A E F+ M V PD +T + C + + Y M +
Sbjct: 214 GYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVEL 273
Query: 198 GVEASS---DHYSCLVDVLSRAGRLHE 221
+ AS+ D Y C +D+ ++A +L E
Sbjct: 274 DLVASTALVDLY-CKIDI-TKARKLFE 298
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++AA ++I GY ++ + + + I Y + G + ++ N F + DVV
Sbjct: 366 CADMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK--PDVV 423
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS +I +YA HG AK +L F+ M ++G+ P+ IT LGVL ACSH G D+ L Y+ M
Sbjct: 424 SWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETM 483
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
++DYG+ A+ H +C+VD+L RAGRL EA I + W ALLGAC+ + +
Sbjct: 484 KKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEM 543
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ E+EP AA+YVLL +Y VG GVK G SW+
Sbjct: 544 GKRIADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWI 599
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHG+GI+ +D + + + L++ Y + GCL ++ VF K+ ++++I+ +
Sbjct: 170 IHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRG 229
Query: 146 G----EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
G A+ A+ F EM GVK TF V+KAC G + ++ ++ +E
Sbjct: 230 GLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKN-SLEG 288
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
S LVD+ S G + + P K+ +W + + C G+
Sbjct: 289 DEFVASSLVDLYSFFGEIDDGLRCFEMTP-KLDVVSWTSAIAGCVKNGKF 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C L L + IH + N ++ + LI Y +C + S +F KD
Sbjct: 51 CAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDN--SSIKDN 108
Query: 133 VAWSSLISAYALHGEAKAALETFK---EMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
V+W+S+ISAYA G + E F+ M G T VL AC F D C+
Sbjct: 109 VSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACC---FCVDDNCF 165
Query: 190 FTRMQRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPVK 232
+ R+ +G++ D + L+D+ +++G L +A V G +K
Sbjct: 166 YGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLK 212
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 146/283 (51%), Gaps = 5/283 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+ISLY+ D + AL LF+ M P T+N +I+ Q S A+ L+ +M
Sbjct: 394 LISLYSRF-DEIEAALSLFYDMREKP-LITWNSMISG-CVQAGKSSDAMELFSEMSMCGK 450
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + L + + +H Y +RN++ +G+ LI+ Y +CG L +
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEK 510
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF ++D + W+++IS Y+L+G A + +++ G+KPD ITFLGVL AC+H
Sbjct: 511 VFYNIKD--PCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHG 568
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G L YF M ++YG+ S HY+C+V +L + G EA E I M ++ + WGA
Sbjct: 569 GLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGA 628
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL AC E+ L E + + +N YVL++ +YA VG
Sbjct: 629 LLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVG 671
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
HGYG+++ + + +GLI Y R + + ++F MR +K ++ W+S+IS
Sbjct: 375 FHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMR--EKPLITWNSMISGCVQA 432
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G++ A+E F EM M G KPD IT +L C G + + R+ V
Sbjct: 433 GKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRN-NVRVEDFI 491
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
+ L+D+ S+ GRL A +V + A W A++ +G
Sbjct: 492 GTALIDMYSKCGRLDYAEKVFYNIKDPCLA-TWNAIISGYSLYG 534
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+QN + AI L+ M C + + IHG+GI+
Sbjct: 133 SQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDS 192
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
L + L+ Y +C L S +F +M + K VV+W+++I Y +G A+ FKEM
Sbjct: 193 HLNNALMSMYAKCDDLEASQLLFDEMDE--KSVVSWNTMIGVYGQNGLFDKAILYFKEML 250
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
G P +T + ++ A F ++ CY + G + + LV + ++ G
Sbjct: 251 KEGFHPSSVTIMNLVSA---NAFPENVHCYVVKC----GFTNDASVVTSLVCLYAKQGFT 303
Query: 220 HEAYEVIRGMPVK 232
+ A ++ + P K
Sbjct: 304 NTAKQLYKYYPTK 316
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 150/283 (53%), Gaps = 4/283 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI Y S N+ A ELF M + +++ IIA Q +A+ + KM
Sbjct: 183 MIGAYVGS-GNMVLAKELFDEMH-ERDVVSWSTIIAGYV-QVGCFMEALDFFHKMLQSEV 239
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C N+ AL+ K IH Y R++I + +L + LI+ Y +CG + ++ +
Sbjct: 240 KPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASS 299
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
VF + + + + V W+++I +A+HG+ + A+ F++M++ V P+ +TF+ +L ACSH
Sbjct: 300 VFHEHK-VKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHG 358
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ YF M DYG+ +HY C+VD+LSR+G L ++ E+I MP+ WGA
Sbjct: 359 YMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGA 418
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
LL ACR + ++ GR E++P + VLL +Y++ G
Sbjct: 419 LLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSG 461
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 132/229 (57%), Gaps = 2/229 (0%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+IH + ++ +++ + + LI Y +CG + ++ +F + ++ +VV+++S+I+ +A
Sbjct: 441 QIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDV--VEPNVVSYNSVINGFAQ 498
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
+G + AL +K M+ ++P+ +TFL VL AC+HAG ++ F M+ YG+E +D
Sbjct: 499 NGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEAD 558
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+C+VD+L RAG L EA +R MP++ + WGALL A + LA++A + E+
Sbjct: 559 HYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAAQHITEL 618
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSE 313
EP NA YV+L+ Y++ G G+K + G SW+ +
Sbjct: 619 EPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITIKD 667
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 3/227 (1%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++HGY +R+ D LG+ L+ Y +CG L S +VF++M +++D + W+++ISAY+
Sbjct: 507 KQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEM--VERDTITWNAIISAYS 564
Query: 144 LHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
HG+ K A+ F+ M+++ G+KPD TF VL ACSH+G DDA F M YG S
Sbjct: 565 QHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPS 624
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
DH+SC+VD+L R+G L EA V+ +L AC G L L R
Sbjct: 625 VDHFSCIVDLLGRSGYLDEAERVVTDGYFGAHPNMCWSLFSACAVHGNLTLGRKVARLLL 684
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
E E N + YVLLA + A G G G SW+
Sbjct: 685 EREQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTTKQPGCSWI 731
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
+L +++ IH +N ++ ++ + LI +Y R G + + +FS + K +++W+S+
Sbjct: 402 SLQMVEMIHSVLCKNGLNK-VEVLNALISSYSRNGQIKRAFQIFSDL--AYKSLISWNSI 458
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
IS + L+G LE F + +KP+ + L CS D + R +G
Sbjct: 459 ISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILR-HG 517
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
++ + LV + S+ G L + V M V+ W A++ A G+
Sbjct: 518 FDSEISLGNALVTMYSKCGFLDRSLSVFNEM-VERDTITWNAIISAYSQHGQ 568
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 3/284 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ + II QN + LY KM C ++AAL+ K+
Sbjct: 384 PDVVLWTSIITGYV-QNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQ 442
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H I+ +GS L Y +CG L + +F +M +DV++W+++IS + +
Sbjct: 443 MHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPS--RDVISWNAMISGLSQN 500
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G ALE F++M + G+KPD +TF+ +L ACSH G D YF M ++ + +H
Sbjct: 501 GHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEH 560
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+LSRAG+L+EA E I V W LLGAC+N L AG E+
Sbjct: 561 YACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELG 620
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ YVLL+ +Y ++G GV G SW+
Sbjct: 621 SPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWI 664
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T++ ++ A D S KA+ L+ KM C ++ A+ K++
Sbjct: 284 NSITWSAMVTGYAQGGD-SDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H + + + S +++ Y +CG L ++ F ++ DVV W+S+I+ Y +G
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQ--PDVVLWTSIITGYVQNG 400
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ + L + +M+M V P+ +T VL+ACS D R+ + YG +
Sbjct: 401 DYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIK-YGFKLEVPIG 459
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFG 249
S L + ++ G L + Y + MP + +W A++ G
Sbjct: 460 SALSAMYTKCGSLDDGYLIFWRMPSR-DVISWNAMISGLSQNG 501
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
+++H I+N + + + L+ Y +CG L ++ F DK+ + WS++++ YA
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFE--FSGDKNSITWSAMVTGYA 296
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
G++ AL+ F +M +GV P T +GV+ ACS
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACS 331
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 140/242 (57%), Gaps = 7/242 (2%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCV-NVAALNLIKEIHGYGIR---NDIDPHPQLG 102
KA+AL+RKM + ++ + + + +HGY + N +D ++
Sbjct: 229 KALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDI--RIV 286
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI+ Y +CGC+ ++ +FS+M D ++ V+W+S++S YA G + A++TF++ME AG
Sbjct: 287 NALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAG 346
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
V+P+ + FL +L ACSH+G ++ L +F +M DYG+ HY C++D+L RAGRL EA
Sbjct: 347 VRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEA 406
Query: 223 YEVIRGMPVKVTAKA-WGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+V +P + W LLGAC + + + + E+E + +YVL++ ++AS
Sbjct: 407 EKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLMSNIFAS 466
Query: 282 VG 283
VG
Sbjct: 467 VG 468
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + I+N + + +G+ LIE Y +C + ++ VF M KDVV WSS+I+AY H
Sbjct: 403 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVVTWSSIIAAYGFH 460
Query: 146 GEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
G+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F M Y ++ +S+
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+ +VD+L R G L A +VI MP++ WGALLGACR + + E+A + +
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 265 EPENAANYVLLAKMYA 280
+P +A Y+LL+ +Y+
Sbjct: 581 DPNHAGYYILLSNIYS 596
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 189 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 246
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++++ YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 247 SWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 305
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+YG E + + L+D+ + +A ++ MP K AW L
Sbjct: 306 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLF 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A A N + L+ +M C ++ L +IH +
Sbjct: 251 MVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 310
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ + + L++ Y +C + ++F++M KDV+AW+ L S YA +G ++
Sbjct: 311 FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK--KDVIAWAVLFSGYADNGMVHESMWV 368
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+ M +G +PD I + +L S G A+C + ++ G E + + L++V +
Sbjct: 369 FRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYA 427
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + +A +V +GM K W +++ A
Sbjct: 428 KCSSIEDANKVFKGMTYKDVV-TWSSIIAA 456
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 87 CAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVV 144
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S+IS Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 145 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 204
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 205 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 241
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + I+N + + +G+ LIE Y +C + ++ VF M KDVV WSS+I+AY H
Sbjct: 403 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVVTWSSIIAAYGFH 460
Query: 146 GEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
G+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F M Y ++ +S+
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+ +VD+L R G L A +VI MP++ WGALLGACR + + E+A + +
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 265 EPENAANYVLLAKMYA 280
+P +A Y+LL+ +Y+
Sbjct: 581 DPNHAGYYILLSNIYS 596
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 189 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 246
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++++ YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 247 SWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 305
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+YG E + + L+D+ + +A ++ MP K AW L
Sbjct: 306 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLF 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A A N + L+ +M C ++ L +IH +
Sbjct: 251 MVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 310
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ + + L++ Y +C + ++F++M KDV+AW+ L S YA +G ++
Sbjct: 311 FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK--KDVIAWAVLFSGYADNGMVHESMWV 368
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+ M +G +PD I + +L S G A+C + ++ G E + + L++V +
Sbjct: 369 FRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYA 427
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + +A +V +GM K W +++ A
Sbjct: 428 KCSSIEDANKVFKGMTYKDVV-TWSSIIAA 456
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 87 CAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVV 144
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S+IS Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 145 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 204
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 205 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 241
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T+ +I+ LA QN + + L+ +M C + +L+ ++I
Sbjct: 387 NVLTWTVMISGLA-QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQI 445
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H IR D G+ LI Y RCG + ++ +VF M +D V+W+++I+A A HG
Sbjct: 446 HSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDS--VSWNAMIAALAQHG 503
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
A+E F++M + PD ITFL +L AC+HAG + YF M YG+ DHY
Sbjct: 504 HGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHY 563
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEP 266
+ L+D+L RAG +A VI+ MP + A W ALL CR G + L A E+ P
Sbjct: 564 ARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIP 623
Query: 267 ENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
Y++L+ MYA++G GVK G SWV
Sbjct: 624 GQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWV 666
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 41/206 (19%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQ----LGSGLIEAYGRCGCLVNSCNVFSKM--RDM----- 128
N +++HGY +R ++P + + LI Y + ++ + VF KM RD+
Sbjct: 303 FNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNA 362
Query: 129 ----------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+++V+ W+ +IS A +G + L+ F +M+ G++P
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422
Query: 167 GITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
F G + ACS G D+ R+ D G+ A + L+ + SR G + A
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAG----NALITMYSRCGVVESAE 478
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFG 249
V MP V + +W A++ A G
Sbjct: 479 SVFLTMPY-VDSVSWNAMIAALAQHG 503
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
VAW+++IS Y G + A +TF+ M G++ D T+ ++ AC G ++ + F
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNC 305
Query: 193 MQRDYG-----VEASSDHY-----SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ +G V S H+ + L+ ++ R+ EA V MPV+ +W A+L
Sbjct: 306 GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVL 364
Query: 243 GACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
N + E A +E+ N + ++ A G
Sbjct: 365 SGYVNAQRI---EEANSIFSEMPERNVLTWTVMISGLAQNG 402
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + I+N + + +G+ LIE Y +C + ++ VF M KDVV WSS+I+AY H
Sbjct: 433 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVVTWSSIIAAYGFH 490
Query: 146 GEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
G+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F M Y ++ +S+
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+ +VD+L R G L A +VI MP++ WGALLGACR + + E+A + +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 265 EPENAANYVLLAKMYA 280
+P +A Y+LL+ +Y+
Sbjct: 611 DPNHAGYYILLSNIYS 626
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 219 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 276
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++++ YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 277 SWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 335
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+YG E + + L+D+ + +A ++ MP K AW L
Sbjct: 336 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFS 384
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A A N + L+ +M C ++ L +IH +
Sbjct: 281 MVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 340
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ + + L++ Y +C + ++F++M KDV+AW+ L S YA +G ++
Sbjct: 341 FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK--KDVIAWAVLFSGYADNGMVHESMWV 398
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+ M +G +PD I + +L S G A+C + ++ G E + + L++V +
Sbjct: 399 FRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYA 457
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + +A +V +GM K W +++ A
Sbjct: 458 KCSSIEDANKVFKGMTYKDVV-TWSSIIAA 486
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 117 CAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVV 174
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S+IS Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 271
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + I+N + + +G+ LIE Y +C + ++ VF M KDVV WSS+I+AY H
Sbjct: 433 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVVTWSSIIAAYGFH 490
Query: 146 GEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
G+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F M Y ++ +S+
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
HY+ +VD+L R G L A +VI MP++ WGALLGACR + + E+A + +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 265 EPENAANYVLLAKMYA 280
+P +A Y+LL+ +Y+
Sbjct: 611 DPNHAGYYILLSNIYS 626
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 219 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 276
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++++ YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 277 SWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 335
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+YG E + + L+D+ + +A ++ MP K AW L
Sbjct: 336 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFS 384
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 4/210 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A A N + L+ +M C ++ L +IH +
Sbjct: 281 MVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 340
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ + + L++ Y +C + ++F++M KDV+AW+ L S YA +G ++
Sbjct: 341 FEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK--KDVIAWAVLFSGYADNGMVHESMWV 398
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F+ M +G +PD I + +L S G A+C + ++ G E + + L++V +
Sbjct: 399 FRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYA 457
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + +A +V +GM K W +++ A
Sbjct: 458 KCSSIEDANKVFKGMTYKDVV-TWSSIIAA 486
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 117 CAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF--MEYPKPDVV 174
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S+IS Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 271
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+ +I A + D +A+ LY +M C N++A K++H +
Sbjct: 456 YTSMITAYSQHGDAE-EALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHA 514
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
I+ + L+ Y +CG + ++ FS++ + +V+WS++I A HG K
Sbjct: 515 IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQ--RGIVSWSAMIGGLAQHGHGKE 572
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
AL F +M V P+ IT + VL AC+HAG ++ YF M+ +G++ + +H++C++
Sbjct: 573 ALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMI 632
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
D+L R+G+L+EA E++ +P + WGALLGA R + L E A +EP+ +
Sbjct: 633 DLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSG 692
Query: 271 NYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
VLLA +YAS G VK G SW+
Sbjct: 693 TLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWI 731
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY+ + + A + LM + N +I+ + D +AI+L+ ++
Sbjct: 326 LIDLYSKC-EMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDE-QAISLFFELHHENI 383
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++ + + K+IH I+ I + + L++ YG+C + +
Sbjct: 384 DFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASK 443
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F + +D+VA++S+I+AY+ HG+A+ AL+ + +M++A +KPD +L AC++
Sbjct: 444 IFEER--TWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANL 501
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ + +G + + LV++ ++ G + +A +P + +W A
Sbjct: 502 SAYEQGKQLHVHAIK-FGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIV-SWSA 559
Query: 241 LLGACRNFG 249
++G G
Sbjct: 560 MIGGLAQHG 568
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
LN+ K++H + + + + + L+ Y +CG +S +F + ++ VV+W++L
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMI--LEPGVVSWNALF 156
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL---CYFTRMQRD 196
S + ++ FK M V+P+ + +L AC AG D + + M+
Sbjct: 157 SCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRDGGIGRTVHGLLMKLG 214
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
+G++ S + LVD+ ++AGR+ +A +V R M + +W A++ C
Sbjct: 215 HGLDQFS--ANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGC 260
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+H + I+ H L + L+ Y +CN+ + + + VV+WS+LIS Y
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTE-PRTVVSWSALISRYVQ 60
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYGV 199
+G K AL F EM GVK + TF VLKACS + G A+ + + D V
Sbjct: 61 NGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ LV + ++ G+ ++ ++ GM ++ +W AL
Sbjct: 121 SNT------LVVMYAKCGQFSDSKKLF-GMILEPGVVSWNALF 156
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%)
Query: 22 MDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
M + P ++N + + Q+D + + L+++M C +
Sbjct: 143 MILEPGVVSWNALFSC-HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGG 201
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+ + +HG ++ + L++ Y + G + ++ +VF +M + D V+W+++I+
Sbjct: 202 IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM--IHPDTVSWNAIIAG 259
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
LH AL EM+ +G P+ T LKAC+ G D R V+
Sbjct: 260 CVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKD-----LGRQIHSCSVKI 314
Query: 202 SSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
SD L+D+ S+ + +A MP K A AL+ + + G E A
Sbjct: 315 DSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG---YSQCGDDEQA 371
Query: 258 GRASAEVEPENAA-NYVLLAKMYASV 282
E+ EN N L+ + SV
Sbjct: 372 ISLFFELHHENIDFNQTTLSTVLKSV 397
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+ +I A + D +A+ LY +M C N++A K++H +
Sbjct: 456 YTSMITAYSQHGDAE-EALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHA 514
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
I+ + L+ Y +CG + ++ FS++ + +V+WS++I A HG K
Sbjct: 515 IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQ--RGIVSWSAMIGGLAQHGHGKE 572
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
AL F +M V P+ IT + VL AC+HAG ++ YF M+ +G++ + +H++C++
Sbjct: 573 ALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMI 632
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
D+L R+G+L+EA E++ +P + WGALLGA R + L E A +EP+ +
Sbjct: 633 DLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSG 692
Query: 271 NYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
VLLA +YAS G VK G SW+
Sbjct: 693 TLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWI 731
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY+ + + A + LM + N +I+ + D +AI+L+ ++
Sbjct: 326 LIDLYSKC-EMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDE-QAISLFFELHHENI 383
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
++ + + K+IH I+ I + + L++ YG+C + +
Sbjct: 384 DFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASK 443
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F + +D+VA++S+I+AY+ HG+A+ AL+ + +M++A +KPD +L AC++
Sbjct: 444 IFEER--TWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANL 501
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
+ + +G + + LV++ ++ G + +A +P + +W A
Sbjct: 502 SAYEQGKQLHVHAIK-FGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIV-SWSA 559
Query: 241 LLGACRNFG 249
++G G
Sbjct: 560 MIGGLAQHG 568
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
LN+ K++H + + + + + L+ Y +CG +S +F + ++ VV+W++L
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMI--LEPGVVSWNALF 156
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL---CYFTRMQRD 196
S + ++ FK M V+P+ + +L AC AG D + + M+
Sbjct: 157 SCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLRDGGIGRTVHGLLMKLG 214
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
+G++ S + LVD+ ++AGR+ +A +V R M + +W A++ C
Sbjct: 215 HGLDQFS--ANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGC 260
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
E+H + I+ H L + L+ Y +CN+ + + + VV+WS+LIS Y
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTE-PRTVVSWSALISRYVQ 60
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYGV 199
+G K AL F EM GVK + TF VLKACS + G A+ + + D V
Sbjct: 61 NGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ LV + ++ G+ ++ ++ GM ++ +W AL
Sbjct: 121 SNT------LVVMYAKCGQFSDSKKLF-GMILEPGVVSWNALF 156
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 16/266 (6%)
Query: 22 MDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
M + P ++N + + Q+D + + L+++M C +
Sbjct: 143 MILEPGVVSWNALFSC-HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGG 201
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
+ + +HG ++ + L++ Y + G + ++ +VF +M + D V+W+++I+
Sbjct: 202 IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM--IHPDTVSWNAIIAG 259
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
LH AL EM+ +G P+ T LKAC+ G D R V+
Sbjct: 260 CVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGLKD-----LGRQIHSCSVKI 314
Query: 202 SSDH----YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
SD L+D+ S+ + +A MP K A AL+ + + G E A
Sbjct: 315 DSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG---YSQCGDDEQA 371
Query: 258 GRASAEVEPENAA-NYVLLAKMYASV 282
E+ EN N L+ + SV
Sbjct: 372 ISLFFELHHENIDFNQTTLSTVLKSV 397
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C +AAL K+IH Y +R ID + + LI+ Y + G + + VF M ++
Sbjct: 208 CARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK--RN 265
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
++W+SL++ Y +HG ++ A F EM + DGITFL VL ACSH+G D + F
Sbjct: 266 AISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFY 325
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
RM +D+ V+ +HY+C+ D+ RAGRL EA +I M ++ T W ALL ACR +
Sbjct: 326 RMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNV 385
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE A + E++ +N Y LL+ +YA+ G+K G SWV
Sbjct: 386 ELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 443
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 25/283 (8%)
Query: 1 MISLYAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
M++ Y+ + AL LF M + + T++ +I+ A + G +A+ ++R+M
Sbjct: 22 MVTGYSQNG-RFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGC-EAMDVFRQMCG 79
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIR-------NDIDPHPQLGSGLIEAYG 110
C +V AL KE H Y I+ ND + + LI+ Y
Sbjct: 80 CSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYA 139
Query: 111 RCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGI 168
+C L + +F ++ D+DVV W+ +I YA +G+A AL+ F EM + P+
Sbjct: 140 KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDF 199
Query: 169 TFLGVLKACSHAG---FADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
T VL AC+ F Y R R D V ++ CL+D+ S++G + A
Sbjct: 200 TISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVAN---CLIDMYSKSGDVDTAQV 256
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
V M K A +W +LL +G G +E A R E+ E
Sbjct: 257 VFDSMS-KRNAISWTSLLTG---YGMHGCSEDAFRVFDEMRKE 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ ++ Y + G ++ ++F KMR+ ++ DVV WSS+IS YA G A++ F++M
Sbjct: 20 NAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 79
Query: 161 AGVKPDGITFLGVLKACSHAG 181
+P+ +T + +L C+ G
Sbjct: 80 CSCRPNVVTLMSLLSGCASVG 100
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 2/183 (1%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
LG+ L++ Y +CG L + +F +M + KDV +W+++IS + +HG+A A+ F ME
Sbjct: 349 LGTALVDVYAKCGFLDEAMEIFERMEN--KDVKSWTAVISGHGIHGQAINAISLFNRMEN 406
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G +P+ ITFL +L ACSH G + + +F RM +++G +HY CL+D+L RAG LH
Sbjct: 407 EGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLH 466
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA+E+I+ +P+K A +W LL ACR G++ L E + + + +L++ YA
Sbjct: 467 EAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKDVLSNFYTPHPTDSLLISGTYA 526
Query: 281 SVG 283
+ G
Sbjct: 527 AAG 529
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
++ + L K +HGY I+ + + + LI+ Y + GC+ + VF + ++KDVV W
Sbjct: 223 DIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGV--VEKDVVLW 280
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ LI YA + A+ + M GVKP+ T +G+L S +G + + Y T +
Sbjct: 281 NCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASG-SMQGVRYVTSLIE 339
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ +E + LVDV ++ G L EA E+ M K K+W A++
Sbjct: 340 EEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENK-DVKSWTAVI 385
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
LG+ LI+ Y +CG + S +VF + D KDV++W+S+I ALHG K +L FK M+
Sbjct: 309 LGNALIDMYAKCGNIKESLDVFWSITD--KDVISWNSVIVGMALHGHGKESLSLFKMMQR 366
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
+ P+ ITF+GVL ACSHAG D+ YF M +Y +E + H C+VD+L RAG L
Sbjct: 367 TKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLK 426
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA + I M ++ A W LL AC+ G++ LA++A + +++ +YVL++ +YA
Sbjct: 427 EAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYA 486
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
S G GV GSS+V
Sbjct: 487 SRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 114/288 (39%), Gaps = 64/288 (22%)
Query: 2 ISLYAHSPDNLPTALELFHLM--DVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXX 58
IS P PT H + +P P+ +N +I ++Q+ +AI+LY +M
Sbjct: 44 ISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRG-SSQSPNPLRAISLYTEMHRH 102
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHG------YG----IRNDIDP-HPQLG----- 102
C + +N +HG +G +RN + H + G
Sbjct: 103 FVKGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVA 162
Query: 103 ---------------SGLIEAYGRCGCLVNSCNVFSKMRDMD------------------ 129
S LI Y R G L + +F++M + D
Sbjct: 163 TSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEME 222
Query: 130 -----------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
KDVV+W+++I+ Y + G +K ALE F EM AGV PD +T L +L AC+
Sbjct: 223 SARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACA 282
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
G ++ ++ + S+ + L+D+ ++ G + E+ +V
Sbjct: 283 DLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVF 330
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 3/236 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +AA+N KE+H +R + S L++ Y +CG + +C +F+ M ++++
Sbjct: 365 CSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEV--RNLI 422
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S++S +A +G AL F++M G+KPD ITF+ VL ACSHAG D+ FT M
Sbjct: 423 TWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLM 482
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+YG++ +HY+C++D+L RAG + EA ++ + W ALLGAC +
Sbjct: 483 G-EYGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGACTKCSDYRT 541
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AE R E+EP+ +YVLL +Y VG GVK G SW+
Sbjct: 542 AERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKSWI 597
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L KE+HG + + + S L++ YG+CGC+ +S VF ++ D +K+ V
Sbjct: 267 CANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSD-EKNNV 325
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCYF 190
+W++++ Y + E + L+ +E GI VL+ACS + C +
Sbjct: 326 SWTAMLGVYCQNKEYQNVLDLVRERGDLNFYAFGI----VLRACSGLAAVNHGKEVHCMY 381
Query: 191 TRM--QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
R +D +E S LVD+ ++ G + A + M V+
Sbjct: 382 VRKGGSKDVIIE------SALVDLYAKCGMVDFACTMFASMEVR 419
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 4/210 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
++D ++I+L+ +M C + +NL + H + D +
Sbjct: 130 TRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGRCFHSMVLTRGFDWNT 189
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM- 158
+ LI+ YG + ++ VF ++ D DV W+S+IS + + K +L+ F M
Sbjct: 190 VVSCSLIDMYGWNRAVDDARRVFDELFVKD-DVFCWTSIISCFTRNDMFKESLKFFYVMN 248
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
+ GV PDG TF +L AC++ G ++ G + S L+D+ + G
Sbjct: 249 RVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVV-GLGFGGNVVVESSLLDMYGKCGC 307
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGA-CRN 247
+ + V + + +W A+LG C+N
Sbjct: 308 VRHSRIVFERLSDEKNNVSWTAMLGVYCQN 337
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 4/238 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQ-LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C +AAL K+IH Y +R ID + + LI+ Y + G + + VF M ++
Sbjct: 265 CARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK--RN 322
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
++W+SL++ Y +HG ++ A F EM + DGITFL VL ACSH+G D + F
Sbjct: 323 AISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFY 382
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
RM +D+ V+ +HY+C+ D+ RAGRL EA +I M ++ T W ALL ACR +
Sbjct: 383 RMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNV 442
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LAE A + E++ +N Y LL+ +YA+ G+K G SWV
Sbjct: 443 ELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWV 500
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 25/283 (8%)
Query: 1 MISLYAHSPDNLPTALELFHLMD---VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXX 57
M++ Y+ + AL LF M + + T++ +I+ A + G +A+ ++R+M
Sbjct: 79 MVTGYSQNG-RFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGC-EAMDVFRQMCG 136
Query: 58 XXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIR-------NDIDPHPQLGSGLIEAYG 110
C +V AL KE H Y I+ ND + + LI+ Y
Sbjct: 137 CSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYA 196
Query: 111 RCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGI 168
+C L + +F ++ D+DVV W+ +I YA +G+A AL+ F EM + P+
Sbjct: 197 KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDF 256
Query: 169 TFLGVLKACSHAG---FADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
T VL AC+ F Y R R D V ++ CL+D+ S++G + A
Sbjct: 257 TISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVAN---CLIDMYSKSGDVDTAQV 313
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE 267
V M K A +W +LL +G G +E A R E+ E
Sbjct: 314 VFDSMS-KRNAISWTSLLTG---YGMHGCSEDAFRVFDEMRKE 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 88 GYGIRND----IDPHPQ----LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
GYGI D ++ P +G+ L++ Y +CG + ++ V+ +MR KDVV W++++
Sbjct: 23 GYGILPDTVGVVNILPVSGFFVGNALVDMYAKCGKMEDASKVYERMRF--KDVVTWNAMV 80
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+ Y+ +G + AL F +M ++ D +T+ V+ + GF +A+ F +M
Sbjct: 81 TGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQM 134
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRD--MDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ ++ Y + G ++ ++F KMR+ ++ DVV WSS+IS YA G A++ F++M
Sbjct: 77 NAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 136
Query: 161 AGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHY---SCLVDVLS 214
+P+ +T + +L C+ G + CY + +D + L+D+ +
Sbjct: 137 CSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYA 196
Query: 215 RAGRLHEAYEVIRGMPVKVTAK-----AWGALLGACRNFGE 250
+ L EV R M ++ K W ++G +G+
Sbjct: 197 KCKSL----EVARAMFDEICPKDRDVVTWTVMIGGYAQYGD 233
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 141/280 (50%), Gaps = 3/280 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N I+A A QN +KA +L+ +M C + L+ K IHG+
Sbjct: 437 SWNAIVAGYA-QNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGF 495
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
IRN + P + + L++ Y +CG L ++ F+ M +D+V+WS++I+ Y HG+ +
Sbjct: 496 VIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPS--QDLVSWSAIIAGYGYHGKGE 553
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
AL + + +KP+ + FL +L +CSH G D L + M RD+G + +H++C+
Sbjct: 554 TALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLEHHACM 613
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAG++ EAY + + M G +L ACR G L +I ++ P +A
Sbjct: 614 VDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIANDIIKLRPMSA 673
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
NYV LA YAS+ G++ G S++
Sbjct: 674 GNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFI 713
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 10/272 (3%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
N+ A ++F + + + +I+ L QN+ + KA+A++ +M
Sbjct: 318 NINVAFKMFE-RSLDKDVVLWTAMISGLV-QNENADKALAVFDQMFKFGMKPSTETMASV 375
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C + A NL K IHGY +R + + L+ Y +CG L S VF +M +
Sbjct: 376 ITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSK--R 433
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D+V+W+++++ YA +G A F EM PD IT + +++ C+ G
Sbjct: 434 DLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIH 493
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
+ R+ G+ + LVD+ + G L A MP + +W A++ +G
Sbjct: 494 GFVIRN-GLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLV-SWSAIIAG---YGY 548
Query: 251 LGLAEIAGRA-SAEVEPENAANYVLLAKMYAS 281
G E A R S +E N+V+ + +S
Sbjct: 549 HGKGETALRLYSKFLETRIKPNHVIFLSILSS 580
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 17/247 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M++LY ++ +LF MD + ++N +++A A D + + L ++M
Sbjct: 208 MVNLYGKC-GSIEDCRKLFEFMD-RRDVVSWNSLLSAYAQIGDLC-EVLLLLKRMKLQGL 264
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
V+ + L + +HG +R + + I Y + G + N
Sbjct: 265 EPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGG----NIN 320
Query: 121 VFSKM--RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
V KM R +DKDVV W+++IS + A AL F +M G+KP T V+ AC+
Sbjct: 321 VAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACA 380
Query: 179 HAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTA 235
G Y R + A ++ LV + ++ G L ++Y V M K
Sbjct: 381 QLGAFNLGKSIHGYILRQKLSLDTAA----HNSLVTMYAKCGHLDQSYIVFDRMS-KRDL 435
Query: 236 KAWGALL 242
+W A++
Sbjct: 436 VSWNAIV 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 21 LMDVPPNES----TFNPIIAALAAQNDGSFKAIAL-YRKMXXXXXXXXXXXXXXXXXXCV 75
L+ PP+ S ++N +I + Q G+ + + + Y M C
Sbjct: 23 LLPHPPSSSATTHSYNALINRHSTQ--GAHRQVLITYTSMLNANIPSDAYTFPSLLKACS 80
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+ +L +H I N + + S LI Y + G + VF M + ++VV W
Sbjct: 81 FLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPE--RNVVPW 138
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD--DALCYFTRM 193
+++I Y+ G+ + A F++M G++P +T L +L S + F
Sbjct: 139 TTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIF--- 195
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
YG + + + +V++ + G + + ++ M + +W +LL A G+L
Sbjct: 196 ---YGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMD-RRDVVSWNSLLSAYAQIGDL 249
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 4/310 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M++ + + D L A +LFH M N T+ ++ Q+ S +A+ L+ KM
Sbjct: 269 MVTGFIQNGD-LNRAEQLFHAMP-QKNVITWTAMMTGYV-QHGLSEEALKLFNKMQANDG 325
Query: 61 XX-XXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C ++A L ++IH + + S LI Y +CG +
Sbjct: 326 LKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAK 385
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+F D++AW+ +I+AYA HG A+ F +M+ G + + +T++G+L ACSH
Sbjct: 386 KMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSH 445
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG D+ YF + ++ ++ DHY+CL+D+ RAGRL EA +I G+ +V+ WG
Sbjct: 446 AGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWG 505
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
ALL C G + ++ ++EPENA Y+L + MYASVG G
Sbjct: 506 ALLAGCSVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKG 565
Query: 300 VKSTTGSSWV 309
+K G SW+
Sbjct: 566 LKKQPGCSWI 575
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
LI E R D + + ++ Y + + + +F++M ++VV+W+++I
Sbjct: 91 LINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPV--RNVVSWNTMIDG 148
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
YA +G + AL+ F M V +++ V+ A +H G DDA F M+ E
Sbjct: 149 YARNGRTQEALDLFGRMPERNV----VSWNTVMTALAHCGRIDDAERLFNEMR-----ER 199
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ +V LS+ GR+ A EV MP++ +W A++
Sbjct: 200 DVVSWTTMVAGLSKNGRVDAAREVFDKMPIR-NVVSWNAMI 239
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
++ A CG + ++ +F++MR+ +DVV+W+++++ + +G AA E F +M + V
Sbjct: 176 VMTALAHCGRIDDAERLFNEMRE--RDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNV- 232
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
+++ ++ + G D+AL F RM E ++ +V + G L+ A +
Sbjct: 233 ---VSWNAMIAGYAQNGRFDEALKLFERMP-----ERDMPSWNTMVTGFIQNGDLNRAEQ 284
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
+ MP K W A++ + + GL+E A
Sbjct: 285 LFHAMPQK-NVITWTAMMTG---YVQHGLSEEA 313
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 147/276 (53%), Gaps = 9/276 (3%)
Query: 12 LPTALELFHLMDVPPNEST---FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
+ +A LF ++P +E + +N I+A + AQN +A + M
Sbjct: 198 VESAFRLFS--EMPESEKSIVSWNSIVA-VCAQNGMPNEAFNCFDMMRVNGFFPDDATMV 254
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C N +++ +HG +D + + + L+ Y + G L NS VF ++
Sbjct: 255 SLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKP 314
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDAL 187
DK VAW+++++ YA+HG K A+E F+ + G++PD +TF +L ACSH+G +
Sbjct: 315 DK--VAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGK 372
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+F M Y V+ DHYSC+VD+L R G L +A+E+I+ MP + + WGALLGACR
Sbjct: 373 YFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRV 432
Query: 248 FGELGLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
+ L + A + ++P + NY++L+ MY++ G
Sbjct: 433 HRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAG 468
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ L+ YG+ G + ++ +FS+M + +K +V+W+S+++ A +G A F M + G
Sbjct: 186 NALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNG 245
Query: 163 VKPDGITFLGVLKACSH--AGFADDAL--CYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
PD T + +L+AC + G + L FT G++ + + L+++ S+ GR
Sbjct: 246 FFPDDATMVSLLQACENFPLGRMVEVLHGVIFT-----CGLDENLTIVTTLLNLYSKLGR 300
Query: 219 LHEAYEVIRGM--PVKVTAKAWGALLG 243
L+ + +V + P KV AW A+L
Sbjct: 301 LNNSRKVFEEISKPDKV---AWTAMLA 324
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +A L K+IH I+ + S L+ Y +CG L +S F + + +DVV
Sbjct: 296 CSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEE--RDVV 353
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WSS+I+AY HG+ + A++ F + E + + +TFL +L ACSH+G D L +F M
Sbjct: 354 LWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMM 413
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
YG++A +HY+C+VD+L R+G L EA +IR MPV A W LL AC+ +
Sbjct: 414 VEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEM 473
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A ++P++ A+YVL+A ++AS VK G SWV
Sbjct: 474 ARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWV 529
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 3/198 (1%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IH Y ++ + P +G GLI Y CG + + VF ++ D ++V+ WS++I Y +H
Sbjct: 245 IHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPD--RNVIVWSAIIRCYGMH 302
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G A+ AL F+++ G+ DGI FL +L ACSHAG ++ F M+ YGV H
Sbjct: 303 GFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTME-TYGVVKGEAH 361
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+C+VD+L RAG L +A E+I+ MP++ +GALLGA R + LAE+A ++
Sbjct: 362 YACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLD 421
Query: 266 PENAANYVLLAKMYASVG 283
P NA YV+LA+MY G
Sbjct: 422 PNNAGRYVILAQMYEDEG 439
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
A+A+ KM C +A++ K+ HG I+ D + + L++
Sbjct: 244 ALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLD 303
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CGC+ ++ VF + VV+W+++I A A +G+ AL+ F EM+ V+P+
Sbjct: 304 MYAKCGCMDSAWTVFRSTNS--RSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNY 361
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
ITF+ VL ACS GF D+ Y + M +DYG+ DHY C+V +L RAG + EA E+I
Sbjct: 362 ITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELIL 421
Query: 228 GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXX 287
MP + W LL AC+ G++ ++A + + + + ++YVLL+ M A
Sbjct: 422 RMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDC 481
Query: 288 XXXXXXXXXXXGVKSTTGSSWV 309
VK GSSW+
Sbjct: 482 VVSLRELMETRNVKKVPGSSWI 503
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 109 YGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG-VKPDG 167
Y +C L ++ +F +M + ++VV+WSS+++ +G A AL F M G VKP+
Sbjct: 2 YIKCKDLTSALQLFDEMPE--RNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNE 59
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
TF+ L+ACS + A ++ + R G+E + + + L R G+L EA ++
Sbjct: 60 FTFVSALQACSLSENVTQAYQIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQIFE 118
Query: 228 GMPVKVTAKAWGALLGACRNF 248
P++ T W ++G F
Sbjct: 119 TSPIRDTV-TWNTMMGGYLEF 138
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
+++L + ++H +R+ +G+ L++ Y + L F ++ KDV +W
Sbjct: 171 TISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPH--KDVCSW 228
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-HAGFADDALCYFTRMQ 194
+ + GE + AL +M+ GVKP+ T L AC+ A + + R++
Sbjct: 229 TQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIK 288
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG-- 252
V+ D+ L+D+ ++ G + A+ V R + + +W ++ AC G+ G
Sbjct: 289 LGSDVDVCVDN--ALLDMYAKCGCMDSAWTVFRSTNSR-SVVSWTTMIMACAQNGQPGEA 345
Query: 253 LAEIAGRASAEVEPENAANYV-LLAKMYA 280
L VEP NY+ + +YA
Sbjct: 346 LQIFDEMKETSVEP----NYITFICVLYA 370
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 138/253 (54%), Gaps = 4/253 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +I+ +N +A+ L+ KM C ++ AL K +H Y
Sbjct: 230 SWNSMISGYV-RNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDY 288
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
RN + + + + +I+ Y +CG + N+ VF + + W+S+I A++G +
Sbjct: 289 IKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPR--RGLSCWNSIIIGLAMNGHER 346
Query: 150 AALETFKEMEMAGV-KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A E F ++E + + KPD ++F+GVL AC H G + A YF M Y +E S HY+C
Sbjct: 347 EAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTC 406
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VDVL +AG L EA E+I+GMP+K A WG+LL +CR + +A A + E+ P +
Sbjct: 407 IVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSD 466
Query: 269 AANYVLLAKMYAS 281
A+ YVL++ ++A+
Sbjct: 467 ASGYVLMSNVHAA 479
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ +I Y +CG + S N+F M + + V+W+S+IS Y +G+ ALE F +M++ G
Sbjct: 201 NSMIMGYAKCGEIDESRNLFDDM--ITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEG 258
Query: 163 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
+ T + +L AC+H G ++R++ E + + ++D+ + G + A
Sbjct: 259 FEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNH-FELNVIVVTAIIDMYCKCGSVENA 317
Query: 223 YEVIRGMPVKVTAKAWGALL 242
EV P + + W +++
Sbjct: 318 VEVFETCPRRGLS-CWNSII 336
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 42 NDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQL 101
ND +A+ ++ +M CV + L + IH GI+ ++
Sbjct: 306 NDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYT 365
Query: 102 GSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA 161
G+ L+ Y +CG + ++ VF + +K+VV+W+S+I A HG AL FKEM
Sbjct: 366 GNSLVVMYSKCGFIGDALCVFKGI--CEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLRE 423
Query: 162 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
GV+ D IT G+L ACS +G A C+F R ++ + +HY+C+VDVL R G + E
Sbjct: 424 GVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEE 483
Query: 222 AYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
A + MPV+ + W LL ACR L +AE A + E+EP+ +A YVLL+ +YAS
Sbjct: 484 AEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYAS 543
Query: 282 VGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
G+ GSSW+
Sbjct: 544 SRRWLEVARIRMKMKHNGIVKQPGSSWI 571
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 12 LPTALELFHLMDVPP-NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+ +++LF ++P N+ T+N II DG +A+ L+ M
Sbjct: 389 IENSMKLFE--ELPDRNDVTWNTIIVGYVQLGDGE-RAMNLFTHMLEHDMQPTEVTYSSV 445
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
++AAL +IH I+ + + + LI+ Y +CG + ++ F KM +
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNK--R 503
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
D V+W+++I Y++HG + AL F M+ KP+ +TF+GVL ACS+AG +F
Sbjct: 504 DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHF 563
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M +DY ++ +HY+C+V +L R GR EA ++I + + + W ALLGAC +
Sbjct: 564 ESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK 623
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ L + + E+EP + A +VLL+ MYA+ G V+ G SWV
Sbjct: 624 VDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWV 682
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 17/247 (6%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++ LYA S + + A LF ++P + ++ A AQ+D S +A+ L+ +M
Sbjct: 278 LLELYAKSGE-IIDAQRLFE--EMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSV 334
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + +L+L K+IH ++ ++ + + + +++ Y +CG + NS
Sbjct: 335 VPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMK 394
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-- 178
+F ++ D++ V W+++I Y G+ + A+ F M ++P +T+ VL+A +
Sbjct: 395 LFEELP--DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASL 452
Query: 179 ---HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTA 235
G +L T +D V S L+D+ ++ GR+++A M K
Sbjct: 453 AALEPGLQIHSLTIKTMYNKDTVVANS------LIDMYAKCGRINDARLTFDKMN-KRDE 505
Query: 236 KAWGALL 242
+W A++
Sbjct: 506 VSWNAMI 512
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
Query: 35 IAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRND 94
+ A A+N +++ L+ +M C+ + A N+ K +HG ++
Sbjct: 208 MVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGC 267
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
D +G L+E Y + G ++++ +F +M D++ WS +I+ YA +K AL+
Sbjct: 268 YDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK--TDLIPWSLMIARYAQSDRSKEALDL 325
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F M V P+ TF VL+AC+ + D + + + +G+ ++ + ++DV +
Sbjct: 326 FLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYA 384
Query: 215 RAGRLHEAYEVIRGMP 230
+ G + + ++ +P
Sbjct: 385 KCGEIENSMKLFEELP 400
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 120/202 (59%), Gaps = 3/202 (1%)
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
AL+ +++HGY + +D +G+ LI YG+ GCL S +VF M + ++V W+++
Sbjct: 240 ALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVM--VVREVCTWNAM 297
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
IS+ A +G K AL+ F++M++ G+KP+ ITF+ VL AC+ GF + L F M +
Sbjct: 298 ISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQ 357
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
V +HY C+VD+L RAG + EA E+IR MP GA LGACR G + L E
Sbjct: 358 VVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEIA 417
Query: 259 RASAEVEPENAANYVLLAKMYA 280
+ +++ ++ Y+LL+ MYA
Sbjct: 418 KM-LKLQTQHCGQYLLLSSMYA 438
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 145/272 (53%), Gaps = 6/272 (2%)
Query: 15 ALELFHLM---DVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
A+ELF M + P+ +T+N +I+ A Q +A + KM
Sbjct: 323 AVELFERMVDEGILPDSATWNSLISGFA-QKGVCVEAFKYFSKMQCAGVAPCLKILTSLL 381
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + L K IHGY +R +D L + L++ Y +CGC+ + VF + D
Sbjct: 382 SVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDD 441
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
W+++I Y +G+ ++A E F EM V+P+ TF+ VL ACSH+G + L +F
Sbjct: 442 PAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFF- 500
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
RM R YG++ +H+ C+VD+L RAG+L EA ++++ + + A + +LLGACR + +
Sbjct: 501 RMIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQEL-AEPPASVFDSLLGACRCYLDS 559
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVG 283
L E ++EP+N A V+L+ +YA++G
Sbjct: 560 NLGEEMAMKLIDIEPKNPAPLVVLSNIYAALG 591
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ + L K++HG ++ + H + + L++ Y +CGC ++ +VFS R ++++
Sbjct: 248 CATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFS--RSEKRNLI 305
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+I+ ++ E++ A+E F+ M G+ PD T+ ++ + G +A YF++M
Sbjct: 306 TWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKM 365
Query: 194 Q 194
Q
Sbjct: 366 Q 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I+ YA + + ALELF M P + FN +++ L+ +N +A+ L+R++
Sbjct: 76 LIASYAANTRSFHYALELFDEMP-QPTITAFNAVLSGLS-RNGPRGQAVWLFRQIGFWNI 133
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
+V + ++++H + ++ + + L+ AY +CG LV+S
Sbjct: 134 RPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNK 192
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKACS 178
VF +R K+VV +++ +S +G + + FK+M M KP+ +T + V+ AC+
Sbjct: 193 VFENLR--VKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACA 249
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 2/270 (0%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
+QN S +A++L+ +M C N+ L+ K IH I
Sbjct: 482 SQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDL 541
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ + L++ Y +CG L + VF + ++K VV+WS++I+A+ +HG+ AA F +M
Sbjct: 542 YIDTALVDMYAKCGDLQTAQKVFDSI--VEKSVVSWSTMIAAHGIHGQINAATSLFHKMV 599
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
++ +KP+ +TF+ +L AC HAG + YF M+ YG+ + +H++ +VD+LSRAG +
Sbjct: 600 LSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDI 659
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
+ AYE+I+ + V A WGALL CR +G + + E + ++ Y LL+ +Y
Sbjct: 660 NGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIY 719
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A G G+K G S V
Sbjct: 720 AEGGNWYESRKVRSKMEGMGLKKVPGYSTV 749
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K +HGY +R + L + LI Y +CG L + +F + D +
Sbjct: 213 CGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDD--RSTS 270
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
W+S+ISAY + + AL+ F +M+ + V+P+ +T + VL +C+ G
Sbjct: 271 CWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLG 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%), Gaps = 17/167 (10%)
Query: 84 KEIHGYGI-RNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
++IHG+ + R D Q + L++ Y +CG ++ +F+K++ K +VAW+ +I +
Sbjct: 426 QQIHGHVMKRGFFDEFVQ--NSLMDMYSKCGFASSAYTIFNKIKH--KSIVAWNCMICGF 481
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-----QRDY 197
+ +G + AL F EM ++ + +TFL ++ACS+ G+ D ++ Q D
Sbjct: 482 SQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDL 541
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ + LVD+ ++ G L A +V + V+ + +W ++ A
Sbjct: 542 YIDTA------LVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAA 581
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
V L + +++HG +++ +G+ L+ YG L ++ VF +M +D+V WS
Sbjct: 115 VGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEM--CVRDLVLWS 172
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
S+IS Y +G + LE F+ M G++PD + L V +AC G A + R+
Sbjct: 173 SIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMRE 232
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN---FGELGL 253
G+ + L+ + S+ G L A + + + T+ W +++ A F E L
Sbjct: 233 -GMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTS-CWTSMISAYNQNECFEE-AL 289
Query: 254 AEIAGRASAEVEPENAA 270
+EVEP +
Sbjct: 290 DVFIKMQDSEVEPNDVT 306
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ A F M P +N +I+ A +N + +A+ L++ M
Sbjct: 297 VTVAKSFFDKMKTPNKVMMWNAMISGYA-KNGHAEEAVELFQAMISRNIKPDSITLRSAV 355
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C V +L L + + Y ++ + + LI+ Y +CG + ++ VF R KD
Sbjct: 356 LACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFD--RASVKD 413
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
VV WS++I Y LHG+ A+ + M+ GV P+ +TF+G+L ACSH+G F
Sbjct: 414 VVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFH 473
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M RD+G++ ++HYSC+VD+L RAG L +AY I MP++ WGALL AC+ +
Sbjct: 474 CM-RDFGIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIHRCV 532
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYAS 281
L E A + ++P N +YV L+ +YAS
Sbjct: 533 TLGEYAAQKLFSLDPYNTGHYVQLSNLYAS 562
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN ++A+ ++ +M +V L + +HG I+ ++ P
Sbjct: 223 QNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPD 282
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
L L Y +CG + + + F KM+ +K V+ W+++IS YA +G A+ A+E F+ M
Sbjct: 283 LLISLTAFYAKCGEVTVAKSFFDKMKTPNK-VMMWNAMISGYAKNGHAEEAVELFQAMIS 341
Query: 161 AGVKPDGITFLGVLKACSHAG------FADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
+KPD IT + AC+ G + DD + R + YG + + + L+D+ +
Sbjct: 342 RNIKPDSITLRSAVLACAQVGSLKLAQWMDD----YVRKSK-YGGDIFVN--TTLIDMYA 394
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ G + A V VK W A++
Sbjct: 395 KCGSVESARLVFDRASVKDVV-MWSAMI 421
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 21 LMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA 78
L D P+ F N II + +N+ I +YR M C +
Sbjct: 101 LFDEFPDPDLFMWNAIIRTYS-RNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACSELL 159
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
L +H + I H + +GL+ Y +CG + + VF ++ D+ +V+W+++
Sbjct: 160 DFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRL--YDRTIVSWTAI 217
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+S Y +GE AL F +M VKPD I+ + V++A
Sbjct: 218 VSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRA 255
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI++Y+ + + L A++LF N T+N +++ + S +A+ LY M
Sbjct: 372 MITVYSKNGE-LDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHS-EALKLYVTMRRFLV 429
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + + + +H + + + +G+ L++ Y +CG L ++
Sbjct: 430 EYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQR 489
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
F+ + +V AW++LI+ YA HG A+ F+ M GV P+ TF+ VL ACSHA
Sbjct: 490 SFTSI--FSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHA 547
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ L +F MQ +Y + + +HY+C+VD+L R+GR+ EA E I MP+K WGA
Sbjct: 548 GLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGA 607
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL A + + L E A ++P + + V L+ MYA G +
Sbjct: 608 LLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLEL 667
Query: 301 KSTTGSSWV 309
+ G SW+
Sbjct: 668 RKDQGFSWI 676
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 143/296 (48%), Gaps = 12/296 (4%)
Query: 23 DVP-PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALN 81
++P N ++ +IA A QN +A++L+ +M C + L
Sbjct: 205 EIPVRNVVSWTTMIAGYA-QNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLK 263
Query: 82 LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
L + IH Y +L + L+ Y CG + + +F+KM K V+W+ +I A
Sbjct: 264 LGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSW--KTTVSWTIIIMA 321
Query: 142 YALHGEAKAALETFKEM-----EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 196
+A G K AL+ FK+M +G++PDG TF+ L ACSHAGF ++ F M
Sbjct: 322 FAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHT 381
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA-E 255
+ + +HY C+VD+LSRAG L EAY +I MP K WGALLG CR LA
Sbjct: 382 WRISLQIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASR 441
Query: 256 IAGRASAEVE-PENAANY-VLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A AE++ + AA Y VLL+ +YA G GVK G SW+
Sbjct: 442 VANTLVAELDSTDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQSWI 497
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 43/289 (14%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
++S YA S L A +LF + P + +N +I A A+ + +K++ Y +M
Sbjct: 54 LLSFYAAS-GKLQHAHKLF-IQIHNPKTTVWNHMIRAYAS-SITPWKSVQYYNQMVLNAC 110
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
CV + +++HG + + + LI Y CG + +
Sbjct: 111 EPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARY 170
Query: 121 VFSKMR------------------DMD-----------KDVVAWSSLISAYALHGEAKAA 151
VF M D D ++VV+W+++I+ YA +G+ A
Sbjct: 171 VFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEA 230
Query: 152 LETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSC 208
L F +M A V+ D + + VL AC+ G Y QR +AS +
Sbjct: 231 LSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQR----QASVRLNNA 286
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
L+ + + G + EAY + M K T +W ++ A F + GL + A
Sbjct: 287 LMHMYASCGIIDEAYRMFTKMSWKTTV-SWTIIIMA---FAKQGLGKEA 331
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C A L+L K+IH Y +R + +L S +++ Y +CG ++ + F M D D+DV+
Sbjct: 404 CATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVI 463
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
++ +I+ YA HG A++ F +M VKPD +TF+ +L AC H G + +F M
Sbjct: 464 LYNVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISM 523
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ DY V +HY+C+VD+ RA +L +A E +R +P+++ A WGA L AC+ L
Sbjct: 524 E-DYSVLPEINHYACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSL 582
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A ++ + + V LA +YAS G K TG SW+
Sbjct: 583 VNKAEEELLKIGADTGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWI 638
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK-DVVAWSSLISAYA 143
++H Y + + +GS L+ Y +CG + + F D++K D++ W+SLI +YA
Sbjct: 659 QLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFD---DVEKPDLIGWTSLILSYA 715
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
HG+ AL ++ M+ GV+PD +TF+G+L ACSH+G ++A Y M DY + S
Sbjct: 716 QHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSH 775
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY+C+VD+L R+GRL EA I MPV+ A WG LL AC+ G+ L ++A
Sbjct: 776 RHYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKVHGDFELGKLAAEKVMG 835
Query: 264 VEPENAANYVLLAKMYA 280
+EP + YV + + A
Sbjct: 836 LEPSDVGAYVSFSNICA 852
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H Y ++ + + +G L Y +CGCL S VF + + KD V+W+S+IS +
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQA--IVKDNVSWASMISGFVE 514
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD-------Y 197
HG AL FKEM V PD IT + +L AC AD L R R+
Sbjct: 515 HGYPDQALRLFKEMLYQEVVPDHITLISILTAC-----ADLRL---LRTGREIHGSTFRL 566
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK 232
G+ ++ LV++ S+ G L A +V +P K
Sbjct: 567 GLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHK 601
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 11/253 (4%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ A F M V N ++ II+ Q+D +F A+ L++ M
Sbjct: 287 MSEAYRQFSQMQVQ-NVVSWTAIISGFVQQDDTTF-ALKLFKDMRQIGHEINAYTVTSVL 344
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + K+IH ++ + + ++G+ L+ Y + G + S FS+M++M KD
Sbjct: 345 SACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNM-KD 403
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
W+S++S++A + + ALE F M GVKPD +L S Y
Sbjct: 404 PGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQVHSYIL 463
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
+ G+ ++ L + S+ G L E+YEV + VK +W +++ F E
Sbjct: 464 KA----GLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNV-SWASMISG---FVEH 515
Query: 252 GLAEIAGRASAEV 264
G + A R E+
Sbjct: 516 GYPDQALRLFKEM 528
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
N AL F+ N +++N II+ LA +N + A+ L+ +M
Sbjct: 186 NFSEALRFFNDASCD-NVASWNAIIS-LAVKNGENQVALNLFSEMCRASLMPNSYTFPSI 243
Query: 71 XXXCVNVAALNLIKEIHGYGIR---NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD 127
C + + + K +HG I+ D+ + + +++ Y + GC+ + FS+M+
Sbjct: 244 LTACCALKEMQIGKGVHGLAIKCGATDV----FVETAIVDLYAKFGCMSEAYRQFSQMQV 299
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 186
++VV+W+++IS + + AL+ FK+M G + + T VL AC+ ++A
Sbjct: 300 --QNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEA 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I LY S D + A +LF + P+ ++N +I+ +N K++ ++ +M
Sbjct: 76 LIGLYCKSSD-MVLAHKLFDTI-TQPSIVSWNVMISGYV-RNSMFLKSLEMFCRMHLFGF 132
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
CV + A ++ ++N + + +++ + + +CN
Sbjct: 133 EPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCK------NCN 186
Query: 121 VFSKMRDMDK----DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
+R + +V +W+++IS +GE + AL F EM A + P+ TF +L A
Sbjct: 187 FSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTA 246
Query: 177 CSHAGFADDALCYFTRMQRDYGVE------ASSDHY--SCLVDVLSRAGRLHEAYEVIRG 228
C C MQ GV ++D + + +VD+ ++ G + EAY
Sbjct: 247 C----------CALKEMQIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQ 296
Query: 229 MPVKVTAKAWGALL 242
M V+ +W A++
Sbjct: 297 MQVQ-NVVSWTAII 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+ L+++M C ++ L +EIHG R + + +G L+
Sbjct: 520 QALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALV 579
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
Y +CG L + VF + KD A SSL+S YA +G + + F +M D
Sbjct: 580 NMYSKCGSLSLARKVFDILP--HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVD 637
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
T +L A S +D +++ G++A S L+ + S+ G + +
Sbjct: 638 AFTITSILGAASLLCQSDIGTQLHAYIEK-LGLQADVSVGSSLLTMYSKCGSIED 691
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 150/309 (48%), Gaps = 7/309 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I +YA + ALE+FH + N ++ II L N+ + A+ +++M
Sbjct: 443 LIDMYAKCK-CIDKALEVFHSIR-DKNIISWTSIILGLRI-NNRCYDALFFFKEMMRRQK 499
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + A KEIH Y +R + + + +++ Y RCG + +
Sbjct: 500 PNWVTLVCVLSA-CARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYA-- 556
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+ + +D+DV W+ L++ YA G+ A E F+ M + V P+ +TF+ +L ACS +
Sbjct: 557 -WKQFFSIDQDVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRS 615
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + L Y+ M+ Y ++ + HY+C+VD+L RAG+L +AYE I+ +P+K WGA
Sbjct: 616 GMVAEGLEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGA 675
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL ACR + L E+A + + + Y+LL+ +YA G+
Sbjct: 676 LLNACRIHRRVELGELAAKNIFHDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGI 735
Query: 301 KSTTGSSWV 309
G SWV
Sbjct: 736 IVDPGCSWV 744
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA D + TA +F M + ++N +IA +N + + L+ +M
Sbjct: 241 LITMYAKCGD-IDTARLVFDKMP-KKDRISWNAMIAG-CFENGECLEGLTLFCRMIEYPV 297
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + L +EIHGY +R P + + LI+ Y G + +
Sbjct: 298 DPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEK 357
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VFS+ +DVV W+++IS Y + + ALET+K ME G+ PD IT VL ACS
Sbjct: 358 VFSQTEC--RDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACS 413
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+LG+ L+ + + G LV++ VF +M + +++ +W+ L+ YA G AL + M
Sbjct: 135 KLGNVLLSMFVKFGNLVDAWYVFGRMPE--RNLFSWNVLVGGYAKGGFFDEALNLYDRML 192
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
GV+PD TF VL+ C + R +G E+ D + L+ + ++ G +
Sbjct: 193 WVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLR-FGFESDVDVINALITMYAKCGDI 251
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGEL--GLAEIAGRASAEVEPE 267
A V MP K +W A++ C GE GL V+P+
Sbjct: 252 DTARLVFDKMP-KKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPD 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 22/245 (8%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSF-KAIALYRKMXXXXXXXXXXXXXX 69
NL A +F M P + F+ + G F +A+ LY +M
Sbjct: 149 NLVDAWYVFGRM---PERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPC 205
Query: 70 XXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD 129
C V L +EIH + +R + + + LI Y +CG + + VF KM
Sbjct: 206 VLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPK-- 263
Query: 130 KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-- 187
KD ++W+++I+ +GE L F M V PD +T V+ AC G D+ L
Sbjct: 264 KDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIG--DERLGR 321
Query: 188 -----CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
T+ RD V Y+ L+ + S G + EA +V + W A++
Sbjct: 322 EIHGYVMRTKFSRDPSV------YNSLIQMYSSVGLVEEAEKVFSQTECRDVV-MWTAMI 374
Query: 243 GACRN 247
N
Sbjct: 375 SGYEN 379
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H Y +++ + + L+ Y +CG + ++ F + + D +W+ LIS ++
Sbjct: 541 KQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISE--PDAFSWNGLISGFS 598
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+G AL TF +M +AGVKPD IT L ++ ACSH G + L YF MQ++Y +
Sbjct: 599 WNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKL 658
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
DHY CLVD+L R GRL EA VI M K + LL AC G + L E R E
Sbjct: 659 DHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLE 718
Query: 264 VEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++P + A Y+LLA +Y + G G++ + G W+
Sbjct: 719 LDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWM 764
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
Query: 20 HLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
HL D PN ++ I+++ S A+ L+ M C +
Sbjct: 70 HLFDEMPNRDVVSWTTILSSHTKTKHHS-DALQLFDMMIGSGEYPNEFTLSSALRSCFAL 128
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCL-VNSCNVFSKMRDMDKDVVAWS 136
+IH ++ ++ + +G+ L+E Y +CGC V + + S ++D DVV+W+
Sbjct: 129 GEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKD-GGDVVSWT 187
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC-SHAGFADDALCYFTRMQR 195
+++S+ +G+ A E + +M +GV P+ TF+ +L A S G + L + +
Sbjct: 188 TMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIM- 246
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMP 230
+G E + + +VD+ S+ R+ +A +V P
Sbjct: 247 -FGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTP 280
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
QN +AI+++R M ++ +L+L ++ H I ++
Sbjct: 295 TQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDL 354
Query: 100 QLGSGLIEAYGRCGCLV-NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
+G+ L++ Y +C + N+ VF ++ +V+ W+SLI+ +A + + + F EM
Sbjct: 355 YIGNALVDMYMKCSHITTNAVKVFREI--TSPNVMCWTSLIAGFA-EKRLEDSFQLFAEM 411
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALC---YFTRMQRDYGVEASSDHYSCLVDVLSR 215
+ AGV+P+ T +L ACS + + + + D + + + LVD +
Sbjct: 412 QAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVA----NALVDTYAG 467
Query: 216 AGRLHEAYEVIRGMPVK 232
G + EA+ VI M ++
Sbjct: 468 VGMIDEAWSVIGTMNLR 484
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQ 100
QN A+ L+ M C ++L + ++H I++ I
Sbjct: 246 QNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVI 305
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ L++ Y +CG + + VF +RD K++V+W+++I YA HG A ALE F M++
Sbjct: 306 WLTSLVDMYAKCGDMDAAFGVFESIRD--KNLVSWNAIIGGYASHGLATRALEEFDRMKV 363
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G PD +TF+ VL AC HAG ++ +FT M YG++A +HYSC+VD+ RAGR
Sbjct: 364 VGT-PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFD 422
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA +I+ MP + WGALL AC L L E A +E + +Y +L+K+
Sbjct: 423 EAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQG 482
Query: 281 SVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
G G+K T SWV
Sbjct: 483 EKGVWSSVNELRDTMKERGIKKQTAISWV 511
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 11/311 (3%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXX 58
+++ YA S L A ++F D P S +N +I+ N + +A+ L+RKM
Sbjct: 157 IVAFYAKS-SALCVARKVF---DKMPQRSVVAWNTMISGYE-HNGLANEAMTLFRKMNEM 211
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C + +L L ++ + N I + LG+ LI + RCG + +
Sbjct: 212 GVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRA 271
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKAC 177
VF + + +V+AW+++IS Y +HG A+E F EM+ G+ P+ +TF+ VL AC
Sbjct: 272 RAVFDSISE--GNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSAC 329
Query: 178 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM-PVKVTAK 236
+HAG + F M+ +YG+ +H+ C+VD+L +AG L EAY+ I+ + PV+
Sbjct: 330 AHAGLIHEGRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPA 389
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
W A+LGAC+ L A + +EPEN +NYVLL+ MYA G
Sbjct: 390 VWTAMLGACKMHKNYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMI 449
Query: 297 XXGVKSTTGSS 307
G+K G S
Sbjct: 450 QRGIKKQAGYS 460
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ FN +I A ++Q+ S I YR+M C +++AL +
Sbjct: 79 PDSFLFNSLIKA-SSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSALKIGTI 137
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H + + + + + ++ Y + L + VF KM + VVAW+++IS Y +
Sbjct: 138 LHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQ--RSVVAWNTMISGYEHN 195
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G A A+ F++M GV PD TF+ V ACS G + C+ G+ +
Sbjct: 196 GLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELG-CWVYDSIVSNGIRVNVIL 254
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ L+++ SR G + A V + + AW A++
Sbjct: 255 GTSLINMFSRCGDVRRARAVFDSIS-EGNVIAWTAMI 290
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 6/279 (2%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIR---NDIDP 97
+N ++A+ ++ +M C + A + K++H IR +D
Sbjct: 254 KNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLF 313
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
+ + + L++ Y +CG + ++ N+F M + KDVV+W++LI+ +A +G + +L F
Sbjct: 314 NVYVFNALMDMYAKCGDMKSAENLFEMMIHV-KDVVSWNTLITGFAQNGRGEDSLAVFDR 372
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
M + ++P+ +TFLGVL AC+HAG + L M+R YGV+ S+HY+ L+D+L R
Sbjct: 373 MIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKN 432
Query: 218 RLHEAYEVIRGMPVKVTAK--AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLL 275
RL EA +I +P +++ WGA+LG CR G L LA A A +EPEN YV+L
Sbjct: 433 RLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVML 492
Query: 276 AKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSES 314
+ +YA+ G G+K S + ES
Sbjct: 493 SNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKES 531
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 118/298 (39%), Gaps = 56/298 (18%)
Query: 19 FHLMDVPP--NESTFNPIIAALAAQNDGSFKAIALYRKMXXXX--XXXXXXXXXXXXXXC 74
+ L D P N ++N +I+ L +++ +A+ +R+M C
Sbjct: 97 YKLFDEMPQRNLVSYNSLISGLT-RHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNC 155
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCG------CLVNS---------- 118
+ + ++++HG + L + LI+AYG+CG CL S
Sbjct: 156 SCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWT 215
Query: 119 ---------------CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGV 163
C VF++M K V+W++LIS + +G ALE F +M GV
Sbjct: 216 SMVVTYTRASRIDDACKVFNEMP--VKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGV 273
Query: 164 KPDGITFLGVLKACSHA---GFADDALCYFTRMQRDYGVEASSDH------YSCLVDVLS 214
P TF+ VL AC+ G C R + SSD+ ++ L+D+ +
Sbjct: 274 LPRAQTFVSVLDACASEALIGRGKQVHCQIIRGR-------SSDNLFNVYVFNALMDMYA 326
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALL-GACRN-FGELGLAEIAGRASAEVEPENAA 270
+ G + A + M +W L+ G +N GE LA + +EP +
Sbjct: 327 KCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVT 384
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 72/235 (30%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGC----------LVNSCN--- 120
CV+ +L K +H I+ + L +GLI+ Y +CGC L N
Sbjct: 21 CVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRTW 80
Query: 121 -----------VFSKMRDM-----DKDVVAWSSLISAYALHGEAKAALETFKEME--MAG 162
VF++ + +++V+++SLIS H K A++ F+EM+ + G
Sbjct: 81 NTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGG 140
Query: 163 VKPDGITFLGVLKACS-----------------------------------HAGFADDAL 187
+ D T + ++ CS G + +
Sbjct: 141 LMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSF 200
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
C F M VE + ++ +V +RA R+ +A +V MPVK T +W AL+
Sbjct: 201 CLFRSM-----VEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTV-SWAALI 249
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 132/258 (51%), Gaps = 19/258 (7%)
Query: 27 NESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
++++++ +I A GSF A ++++ C A K
Sbjct: 216 DDASWSTMIVGFA--KSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKI 273
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HG+ + + + LI+ Y +CG NV DM K V S A+H
Sbjct: 274 LHGFMEKAGFLCIVSVNNALIDTYSKCG------NV-----DMAKLVFNIS-----LAMH 317
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G A A+ F EME +GV+PDG+TF+ +L ACSH+G + F++M+ YG+E + +H
Sbjct: 318 GRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEH 377
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y C+VD+ RA RL +AYE IR MP+ W LLGAC G + LAE+ AE++
Sbjct: 378 YGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMD 437
Query: 266 PENAANYVLLAKMYASVG 283
P N+ ++VLL+ +YA G
Sbjct: 438 PNNSGDHVLLSNVYAVAG 455
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 149/267 (55%), Gaps = 4/267 (1%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A ++F MD + +++N +I+ LA Q +AIAL+ +M C
Sbjct: 139 ARKVFDEMD-KRDIASWNAMISGLA-QGSRPDEAIALFNRMKEEGWRPNDVTVLGALSAC 196
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+ AL + +H Y + +D + + + +I+ + +CG + + +VF M K ++
Sbjct: 197 SQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESM-SCRKSLIT 255
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+++I A+A++G+ AL+ M + G PD +++LG L AC+HAG D+ + F M+
Sbjct: 256 WNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMK 315
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
GV+ + HY +VD+L RAGRL EAYE+I MP+ W +LLGAC+ +G + +A
Sbjct: 316 VS-GVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNVEMA 374
Query: 255 EIAGRASAEVEPENAANYVLLAKMYAS 281
E+A + E+ ++ ++VLL+ +YA+
Sbjct: 375 EMASKKLVEMGSNSSGDFVLLSNVYAA 401
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 1 MISLYAHSPD-NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ L++ SP NL A +F + P + +N I+ LA Q+ ++I+ YR M
Sbjct: 23 LLELFSVSPSGNLSLAGNIFRQIQ-NPTTNDYNAILRGLA-QSSEPTQSISWYRDMLCCV 80
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C A + ++H +R D L + L++ Y + G + +
Sbjct: 81 QRVDALTCSFALKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYAR 140
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF +M +D+ +W+++IS A A+ F M+ G +P+ +T LG L ACS
Sbjct: 141 KVFDEMDK--RDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQ 198
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G + R D ++ + + ++D+ ++ G + +AY V M + + W
Sbjct: 199 LGALKEGEI-VHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWN 257
Query: 240 ALLGA 244
++ A
Sbjct: 258 TMIMA 262
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 5/291 (1%)
Query: 21 LMDVPPNEST--FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVA 78
+ D P ++T +N IIA A + S +A+ +Y KM C +A
Sbjct: 281 VFDQMPQKTTVGWNTIIAGYAFRG-FSEEALGIYYKMRDSGTKIDHFTISIVITICARLA 339
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
+L K+ H +R S L+ Y + G + N+ +VF KM K++++W++L
Sbjct: 340 SLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHR--KNIISWNAL 397
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 198
I+ Y HG + A+E F++M + P+ +TFL VL ACS++G ++ F M +D+
Sbjct: 398 IAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHN 457
Query: 199 VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAG 258
++ + HY+C++++L R G L EA +IR P T W ALL ACR L L + A
Sbjct: 458 IKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAA 517
Query: 259 RASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+EPE NYV+L +Y S G G++ +W+
Sbjct: 518 EKLYGMEPEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWI 568
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IH ++ ++ P + LI+ Y +CG + ++ VF +M K V W+++I+ YA
Sbjct: 244 RQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMP--QKTTVGWNTIIAGYA 301
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-AGFADDALCYFTRMQRDYGVEAS 202
G ++ AL + +M +G K D T V+ C+ A + ++R +G +
Sbjct: 302 FRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLV 361
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
++ S LV+ S+ GR+ A V M K +W AL+ +G G E A
Sbjct: 362 AN--SALVNFYSKWGRMENARHVFDKMHRK-NIISWNALIAG---YGHHGRGEEAIEMFE 415
Query: 263 EVEPEN 268
++ EN
Sbjct: 416 KMLQEN 421
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 2/208 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ + +L K IHG +RN + + + + LI+ Y + GCL VF M + K+
Sbjct: 84 CTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSE--KNRY 141
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+++ +IS A+HG K AL+ F EM G+ PD + ++GV ACSHAG ++ L F M
Sbjct: 142 SYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSM 201
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
Q ++ +E + HY C+VD+L R G L EAYE+I+ M +K W +LL AC+ L +
Sbjct: 202 QFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEI 261
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYAS 281
+IA + N+ +Y++LA MYA
Sbjct: 262 GKIAAENLFMLNQNNSGDYLVLANMYAK 289
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI YG+CG + N+C+VF+ M +K V +WS++I A+A L +M G
Sbjct: 11 NSLINMYGKCGEIKNACDVFNGMD--EKSVASWSAIIGAHACVEMWNECLMLLGKMSSEG 68
Query: 163 -VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 221
+ + T + VL AC+H G D C + R+ E + + L+D+ ++G L +
Sbjct: 69 RCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNIS-ELNVVVKTSLIDMYVKSGCLEK 127
Query: 222 AYEVIRGMPVK 232
V + M K
Sbjct: 128 GLRVFKNMSEK 138
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 38 LAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDP 97
L+A G +A+ L+ K+ C + AL ++IH I+
Sbjct: 371 LSAYQKG-IEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLS 429
Query: 98 HPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKE 157
+GS +I Y +CG + + VF +M + ++ W+++I+ +A HG +K AL F++
Sbjct: 430 DVVVGSSMINMYNKCGSIERASKVFLEMSI--RTMILWTTMITGFAQHGWSKQALNLFED 487
Query: 158 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 217
M++ G++P+ +TF+GVL AC AG ++A YF MQ++Y ++ DHY CLVD+L R G
Sbjct: 488 MKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLG 547
Query: 218 RLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAK 277
++ EA+++I+ M K + W L+ C + G L L A ++P++ Y LL
Sbjct: 548 QVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLN 607
Query: 278 MYASVG 283
Y S G
Sbjct: 608 AYVSAG 613
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 17/187 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRC-GCLVNSCNVFSKMRDMDKDV 132
C ++ +L L +++H Y I+ +D +G+ L Y +C G L F +++ +KDV
Sbjct: 190 CTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIK--EKDV 247
Query: 133 VAWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHA-----GFADD 185
++W++ ISA GEA + F EM + V+P+ T L C G
Sbjct: 248 ISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVH 307
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
ALC T++ G E++ + L+ + + G + EA + +GM V W A++
Sbjct: 308 ALC--TKL----GYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMIAGH 360
Query: 246 RNFGELG 252
EL
Sbjct: 361 AQMMELS 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V L L ++H + + + ++ + L+ Y +CGC+V + +F M D+ ++V
Sbjct: 294 CCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDV--NLV 351
Query: 134 AWSSLISAYALHGEAKA-----------ALETFKEMEMAGVKPDGITFLGVLKACSHAGF 182
W+++I+ +A E AL F ++ +G+KPD TF VL CS
Sbjct: 352 TWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMA 411
Query: 183 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ R + G + S ++++ ++ G + A +V M ++ T W ++
Sbjct: 412 LEQGEQIHARTIKT-GFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIR-TMILWTTMI 469
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 122/207 (58%), Gaps = 6/207 (2%)
Query: 77 VAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
V+ L ++++ H + I+N + + +G+ LIE Y +C + ++ VF M KDVV
Sbjct: 329 VSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVV 386
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
WSS+I+AY HG+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F
Sbjct: 387 TWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDI 446
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M Y ++ +S+HY+ +VD+L R G L A ++I MP++ WGALLGACR +
Sbjct: 447 MVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIK 506
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMY 279
+ E+A + ++ +A Y+LL+ +Y
Sbjct: 507 MGEVAAKNLFSLDANHAGYYILLSNIY 533
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 127 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 184
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++ + YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 185 SWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 243
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+YG E + + L+D+ + +A + MP K AW L
Sbjct: 244 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLF 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L +IH + + + + L++ Y +C + + F++M KDV+
Sbjct: 228 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK--KDVI 285
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW+ L S YA +G ++ F+ M +G +PD I + +L S G A+C+ +
Sbjct: 286 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFV 345
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ G E + + L++V ++ + +A +V +GM K W +++ A
Sbjct: 346 IKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVV-TWSSIIAA 394
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 25 CAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF--MEYPKPDVV 82
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S++S Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 83 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 142
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 143 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 179
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 122/207 (58%), Gaps = 6/207 (2%)
Query: 77 VAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
V+ L ++++ H + I+N + + +G+ LIE Y +C + ++ VF M KDVV
Sbjct: 421 VSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVV 478
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
WSS+I+AY HG+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F
Sbjct: 479 TWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDI 538
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M Y ++ +S+HY+ +VD+L R G L A ++I MP++ WGALLGACR +
Sbjct: 539 MVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIK 598
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMY 279
+ E+A + ++ +A Y+LL+ +Y
Sbjct: 599 MGEVAAKNLFSLDANHAGYYILLSNIY 625
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 219 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 276
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++ + YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 277 SWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 335
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+YG E + + L+D+ + +A + MP K AW L
Sbjct: 336 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFS 384
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L +IH + + + + L++ Y +C + + F++M KDV+
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK--KDVI 377
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW+ L S YA +G ++ F+ M +G +PD I + +L S G A+C+ +
Sbjct: 378 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFV 437
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ G E + + L++V ++ + +A +V +GM K W +++ A
Sbjct: 438 IKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVV-TWSSIIAA 486
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 117 CAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF--MEYPKPDVV 174
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S++S Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 271
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 122/207 (58%), Gaps = 6/207 (2%)
Query: 77 VAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
V+ L ++++ H + I+N + + +G+ LIE Y +C + ++ VF M KDVV
Sbjct: 421 VSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY--KDVV 478
Query: 134 AWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
WSS+I+AY HG+ + AL+ F +M + KP+ +TF+ +L ACSH+G + + F
Sbjct: 479 TWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDI 538
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M Y ++ +S+HY+ +VD+L R G L A ++I MP++ WGALLGACR +
Sbjct: 539 MVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIK 598
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMY 279
+ E+A + ++ +A Y+LL+ +Y
Sbjct: 599 MGEVAAKNLFSLDANHAGYYILLSNIY 625
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L + +HG+ R +D L + L+ YG+ G + N+ N+F +M D KD++
Sbjct: 219 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSD--KDII 276
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+WS++ + YA +G L+ F EM +KP+ +T + VL+AC+ ++ + +
Sbjct: 277 SWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGM-KIHEL 335
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+YG E + + L+D+ + +A + MP K AW L
Sbjct: 336 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFS 384
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ L +IH + + + + L++ Y +C + + F++M KDV+
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPK--KDVI 377
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW+ L S YA +G ++ F+ M +G +PD I + +L S G A+C+ +
Sbjct: 378 AWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFV 437
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
++ G E + + L++V ++ + +A +V +GM K W +++ A
Sbjct: 438 IKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVV-TWSSIIAA 486
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L K IHG+ + ID +GS LI+ Y +CG + ++ VF M DVV
Sbjct: 117 CAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF--MEYPKPDVV 174
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHA----------GF 182
W+S++S Y G + AL F M ++ V PD +T + V AC+ GF
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 183 A-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
D+ LC + YG S + S L +S
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS 271
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 130/238 (54%), Gaps = 5/238 (2%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+A+AL+ +M C + L + IH Y N I +G+ LI
Sbjct: 320 EAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLI 379
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
E Y +CGC+ S VF+ +++ KD +W+S+I A++G+ ALE F+EM++ G KPD
Sbjct: 380 EMYAKCGCVEKSLEVFNGLKE--KDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPD 437
Query: 167 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVI 226
+TF+ +L ACSH G ++ F M YG+E + +HY C +D+L RAG LHEA E+I
Sbjct: 438 DVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELI 497
Query: 227 RGMPVK---VTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYAS 281
+ +P + +G+ L ACR +G + E A +V+ +++ + LLA +YAS
Sbjct: 498 KKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIATALEKVKSSDSSLHSLLASIYAS 555
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 31/188 (16%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCL--------------VN----------SC 119
KEIHG+ I ++D ++G+ L++ Y +CG + VN SC
Sbjct: 225 KEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSC 284
Query: 120 NVFSKMRDM-----DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
K RD+ +DVV W+++I+ Y A+ F+EM++ GVKPD + +L
Sbjct: 285 GELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALL 344
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
C+ G + + R+ + + + L+++ ++ G + ++ EV G+ K T
Sbjct: 345 TCCAQLGTLEHGR-WIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDT 403
Query: 235 AKAWGALL 242
A +W +++
Sbjct: 404 A-SWTSII 410
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 149/311 (47%), Gaps = 9/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
M+ YA L L LF M+ + +N +I A QN + + L+R+M
Sbjct: 190 MLMCYAKHGKLLEARL-LFDGMEGNRDVVVWNVMIDGYA-QNGFPNECLLLFRRMLVEKV 247
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLG----SGLIEAYGRCGCLV 116
C V AL + +H Y I+N D + + L++ Y +CG L
Sbjct: 248 KPNVITLLPVLSSCGQVGALESGRWVHSY-IKNGKDGVVGVEVRVGTALVDMYCKCGSLE 306
Query: 117 NSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 176
++ VF K+ KDVVAW+S+I YA++G ++ AL+ F EM GV+P +TF+ +L A
Sbjct: 307 DARKVFDKIDG--KDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTA 364
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
C H+G F M+ +Y +E +H+ C+V++L RAGRL EAY+++R M +
Sbjct: 365 CGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPV 424
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXX 296
WG LL ACR + L E + ++ YVLL+ +YA+ G
Sbjct: 425 IWGTLLWACRLHNNISLGEEIAEFLLSNDLASSGTYVLLSNIYAAAGNWDGAAKVRSLMK 484
Query: 297 XXGVKSTTGSS 307
GV+ G S
Sbjct: 485 DSGVEKEPGCS 495
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM------ 128
+N + + IK IH + I+ + + +GL++ Y R G +++ +F KM +
Sbjct: 129 LNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFT 188
Query: 129 ------------------------DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
++DVV W+ +I YA +G L F+ M + VK
Sbjct: 189 TMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVK 248
Query: 165 PDGITFLGVLKACSHAGFADDA--LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEA 222
P+ IT L VL +C G + + + + +D V + LVD+ + G L +A
Sbjct: 249 PNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDA 308
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA-ANYVLLAKMYAS 281
+V + K AW +++ + GL+E A + E+ E +YV + +
Sbjct: 309 RKVFDKIDGKDVV-AWNSMI---MGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTA 364
Query: 282 VG 283
G
Sbjct: 365 CG 366
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 9/302 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
+L + LF L +E ++N +IA N S +AI+ +R+M
Sbjct: 551 SLCSVERLFLLTKHVKDEVSWNVMIAGYL-HNGYSNEAISTFRRMKLENVRPNLVTFVTI 609
Query: 71 XXXCVNVAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRD 127
V+ L++++E H IR +G+ LI+ Y +CG L S F +M +
Sbjct: 610 LPA---VSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMEN 666
Query: 128 MDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 187
KD ++W++++SAYA+HG+ + A+ F M+ + V+ D ++++ VL AC H+G +
Sbjct: 667 --KDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGW 724
Query: 188 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
F M + VE S +HY+C+VD+L AG E ++ M + A+ WGALL AC+
Sbjct: 725 DIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKI 784
Query: 248 FGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
+ L E+A ++EP N ++V+L+ +YA G G+K G S
Sbjct: 785 HSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYS 844
Query: 308 WV 309
WV
Sbjct: 845 WV 846
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ + L K +H Y I+ D++ + + L+ Y R + +F++M+ KD+V
Sbjct: 410 CTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQI--KDIV 467
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W++LI+ + +G+ ALE F ++++G+ PD T +G+ AC+ D C +
Sbjct: 468 VWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGI 527
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRL 219
++ G E+ L+D+ ++ G L
Sbjct: 528 EKS-GFESDIHVKVALMDMYAKCGSL 552
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
+N+ K+I G+ D+ +G+ LI+ + + GCL N+ NVF KM KD V W+++I
Sbjct: 119 VNIYKDIVFNGLECDV----YIGTSLIDMFCKMGCLDNARNVFDKMPV--KDGVCWNAMI 172
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC-----YFTRMQ 194
S + ALE F M+M G + D ++ L + A S G D C Y R +
Sbjct: 173 SGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLG--DVGCCKSIHGYVVR-R 229
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
GV ++S L+D+ + G +H A V M V+ +W ++
Sbjct: 230 SICGVVSNS-----LIDMYCKCGDVHSAQRVFDRMGVRDDV-SWATMMA 272
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
KEI+ Y ++ + + + ++ Y +CG L + +F + +D+VAWS+ +SA
Sbjct: 319 KEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEG--RDLVAWSAFLSALV 376
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDALCYFTRMQRDYGVE 200
G + L F+ M+ G+KPD ++ C S+ G CY + +E
Sbjct: 377 ETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD----ME 432
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+ + LV + R A + M +K W L+ +G+ LA
Sbjct: 433 SDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIV-VWNTLINGFTKYGDPHLA 485
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 2/243 (0%)
Query: 74 CVNVAALNLIKEIH-GYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C + AL L + IH Y N + S +++ Y +CG + + +VF K D K
Sbjct: 365 CARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKT 424
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
++S+IS A HG + A F+EM + G+KPD ITF+ VL AC H G D F
Sbjct: 425 TFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFE 484
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M YGV +HY C+VD+L RAG L EA+ +I MP K A W ALL AC+ G++
Sbjct: 485 SMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDV 544
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVY 311
LA +A E++ ++ A YV+L+ M + G++ G S+V
Sbjct: 545 ALARVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEM 604
Query: 312 SES 314
+ S
Sbjct: 605 NRS 607
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA---------- 150
L + L++ Y +CG LV + V S ++ V AW+SL+SAYAL GE K
Sbjct: 258 LVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGE 317
Query: 151 ---------------------ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 189
ALE F ++E G+KPD + + L AC+ G AL
Sbjct: 318 RDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLG----ALEL 373
Query: 190 FTRMQRDYGVE-----ASSDHYSCLVDVLSRAGRLHEAYEVIR 227
R+ R Y E + S +VD+ ++ G + A +V R
Sbjct: 374 GRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFR 416
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 19/267 (7%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV--AALNLI 83
P+ +N II A + + +L++ M C NV +A
Sbjct: 78 PDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFG 137
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++H + +RN + + L+ Y G +VN+ VF + +D V+++++I+ +A
Sbjct: 138 FQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDE--SFVRDCVSFNTMINGFA 195
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYG 198
G+ F EM V+PD TF+ +L CS G L Y R+ G
Sbjct: 196 RKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVY-----RELG 250
Query: 199 VEASSDHY-SCLVDVLSRAGRLHEAYEVIRGM-PVKVTAKAWGALLGACRNFGELGLAEI 256
+ + LVD+ ++ GRL A V+ + P K AW +L+ A GE+ ++
Sbjct: 251 CFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEV---KV 307
Query: 257 AGRASAEVEPENAANYVLLAKMYASVG 283
A R ++ + ++ + Y+ G
Sbjct: 308 ARRLFDQMGERDVVSWTAMISGYSHAG 334
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C +A L K+IH I+ + S L+ Y +CG L +S F + + +DVV
Sbjct: 315 CSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEE--RDVV 372
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
WSS+I+AY HG+ + A++ F + E + + +TFL +L ACSH+G D L +F M
Sbjct: 373 IWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMM 432
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
YG++A +HY+C+VD+L R+G L EA +IR MPV A W LL AC+ +
Sbjct: 433 VEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEM 492
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A ++P++ A+YVL+A ++AS VK G SWV
Sbjct: 493 ARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWV 548
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 11 NLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXX 70
N+ A LF M N +T+N ++ L +A+ L+ +M
Sbjct: 153 NIENAKNLFDEM-TERNVATWNAMVTGLVKFGLNE-EALLLFSRMNVLGFVPDEYSFGSV 210
Query: 71 XXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK 130
C ++ AL + +++H Y + + + +G L Y + G L N + M + +
Sbjct: 211 LRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCN- 269
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+VAW++L++ A + + L+ + M+MAG +PD ITF+ V+ +CS
Sbjct: 270 -LVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCS 316
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 127/234 (54%), Gaps = 2/234 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N+A+L + H I+ + +G+ LI Y +CG + +S +F K+ ++VV+W
Sbjct: 304 NIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKI--CKRNVVSW 361
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+++I YA +G A+ F+ M G+KP+ ++ LG+L AC+HAG D+ YF + +
Sbjct: 362 NAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARI 421
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
+ +HY+C+VD+L+R+GR EA IR MP W A+LG C+ + L E
Sbjct: 422 ESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGE 481
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A + ++P++ ++YV+++ +++ G G+K GSSW+
Sbjct: 482 LAAKNILALDPDDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWI 535
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 141/273 (51%), Gaps = 18/273 (6%)
Query: 27 NESTFNPIIAALAAQNDGSFK----AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNL 82
N T+N +I + DG+ K + L+++M + L +
Sbjct: 5 NVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAASQLGM 64
Query: 83 IKE---IHGYGIR--NDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
++ +HG+ ++ ++ +G+GL++ Y +CGCL ++ +VF +M+ ++V+ W++
Sbjct: 65 VEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKW--RNVLTWTA 122
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
+ + A+HG + AL+ EM GVKP+ TF +L AC HAG ++ L F M+ +
Sbjct: 123 MTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEGKF 182
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
GV HY C+VD+L R G L+EAY+ I MP+ W +LL ACR G++ + E
Sbjct: 183 GVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDVVMGEKV 242
Query: 258 GR-------ASAEVEPENAANYVLLAKMYASVG 283
GR S+E + +YV L+ +YAS G
Sbjct: 243 GRFLLKFKEKSSEELAHKSEDYVALSNVYASAG 275
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
++++++ +I A GSF A ++++ C A K
Sbjct: 240 DDASWSTMIVGFA--KSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKI 297
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+HG+ + + + LI+ Y +CG + + VF M +K +V+W+S+I+A A+H
Sbjct: 298 LHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHM-SAEKCIVSWTSMIAALAMH 356
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G A A+ F EME +GV+PDG+TF+ +L ACSH+G + F++M+ YG+E + +H
Sbjct: 357 GRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEH 416
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
Y C+VD+ RA RL +AYE IR MP+ W LLGAC
Sbjct: 417 YGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGAC 456
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
++H + R+ D H +G+ LI Y CGC + VF +M +VVAW+++++A
Sbjct: 134 QLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMS--QPNVVAWNAVVTACFR 191
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
G+ + A F+ M + + G +KA A C +M+ D
Sbjct: 192 CGDVEGAWGLFERMPVRNLTSWNTMLAGYVKA-GQLWLARRVFCEM-KMRDDAS------ 243
Query: 205 HYSCLVDVLSRAGRLHEAYEVI------RGMPVKVTAKAWGALLGACRNFGELGLAEI 256
+S ++ +++G H+A+ R P +V+ +L AC G +I
Sbjct: 244 -WSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLT---GVLSACAQAGAFEFGKI 297
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 112/220 (50%), Gaps = 6/220 (2%)
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
GI+N + +G+ LI Y +CGC+ +S +VF MR+ +D++ W+++I Y+ HG K
Sbjct: 358 GIKNRV----IVGNALINMYSKCGCIDSSYDVFFDMRN--RDIITWNAMICGYSQHGLGK 411
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
AL F++M AG P+ +TF+GVL AC+H ++ Y ++ + + VE +HY+C+
Sbjct: 412 QALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCV 471
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
V VL RAG L EA +R VK AW LL AC L +++P +
Sbjct: 472 VAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDM 531
Query: 270 ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
Y LL+ MYA VK G SW+
Sbjct: 532 GTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWI 571
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L L ++H ++ + +GS L++ +G+CG ++++ VF +++ ++VV
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQN--RNVV 294
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+SL++AY +GE + L M+ G + TF +L A + R+
Sbjct: 295 VWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARV 354
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
++ G++ + L+++ S+ G + +Y+V M + W A++
Sbjct: 355 EK-LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNR-DIITWNAMI 401
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
NE ++N +I+ A + +G +A+ L+ KM +L K +
Sbjct: 260 NEVSWNALISGFARKGEGE-EALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H + +++ +G+ L+ Y + G + ++ VF ++ +D VV+ +S++ YA HG
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVD--VVSCNSMLIGYAQHG 376
Query: 147 EAKAALETFKEMEM-AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
K A+E F+EM + ++P+ ITFL VL ACSHAG D+ L YF M++ YG+E H
Sbjct: 377 LGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSH 435
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y+ +VD+ RAG L +A I MP++ A WGALLGA + + A + E++
Sbjct: 436 YTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELD 495
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P + LL+ +YAS G G+K SWV
Sbjct: 496 PFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWV 539
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L K +H + + + + + ++ Y +CG L + VF +M KDVV
Sbjct: 101 CTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEM--CVKDVV 158
Query: 134 AWSSLISAYALHG---EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD----- 185
W+S+I+ Y+ G A AL F EM G++P+ ++K C G D
Sbjct: 159 TWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIH 218
Query: 186 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGAC 245
C+ YG + + S LVD+ +R G L E+ V + K +W AL+
Sbjct: 219 GCCW------KYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK-NEVSWNALISGF 271
Query: 246 RNFGE 250
GE
Sbjct: 272 ARKGE 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K+IHG + + +GS L++ Y RCG L S VF ++ K+ V+W++LIS +A
Sbjct: 215 KQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELES--KNEVSWNALISGFA 272
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
GE + AL F +M+ G T+ +L + S G
Sbjct: 273 RKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTG 310
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N ++N +IA + D + A+ L+ +M C AL + +I
Sbjct: 251 NAVSWNSMIAGCVSVRDYA-GALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKI 309
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
+ + LG+ L+ Y +CG L + +F+ M+ K V W++++ A+HG
Sbjct: 310 YESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKM--KTVSCWNAMVIGLAVHG 367
Query: 147 EAKAALETFKEMEMA---GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ + F EME + ++PD +TF+GVL ACSH G D A YF M + Y + S
Sbjct: 368 YCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDS 427
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY C+VD+LSR G L EAY++I P + + W LLGACR LAEI+ + A+
Sbjct: 428 KHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAK 487
Query: 264 VEPENAANYVLLAKMYASVG 283
++ +YVLL+ +YA G
Sbjct: 488 LKQLIDGDYVLLSNIYAEAG 507
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI Y R G + + VF M + ++ V+W+S+I+ + ALE F EM+ AGVK
Sbjct: 227 LIARYIRLGDVQAARRVFGCMPE--RNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 284
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAY 223
P +T + +L AC+ G + + ++ ++ +E+ + LV++ + G L A+
Sbjct: 285 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGN--ALVNMYCKCGNLSLAW 342
Query: 224 EVIRGMPVKVTAKAWGALL------GACRNFGELGLAEIAGRASAEVEPENAA 270
E+ GM +K T W A++ G C +L E+ + P+
Sbjct: 343 EIFNGMKMK-TVSCWNAMVIGLAVHGYCEEVFQL-FTEMEESLGGSIRPDRVT 393
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N ++ +I +G A++L+ M C ++A L K +
Sbjct: 300 NIVSWTSMIVGYTRNGNGDL-ALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMV 358
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I +D + +G+ LI Y +CG + S + D KD+V+W+S++ A+ L+G
Sbjct: 359 HSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGIND--KDLVSWNSMLFAFGLNG 416
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
A+ F+EM +GV+PD +TF G+L CSH G D+ +F M +YG+ DH
Sbjct: 417 RGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHV 476
Query: 207 SCLVDVLSRAGRLHEAYEVIR--GMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEV 264
+C+VD+L R G + EA + R + + LLGAC G+LG G +
Sbjct: 477 ACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNL 536
Query: 265 EPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
EP+ YVLL+ MY + G GVK G SW+
Sbjct: 537 EPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWI 581
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 131/249 (52%), Gaps = 8/249 (3%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDP-HP 99
QN +++ L+R M C ++ AL + IH + + + P
Sbjct: 216 QNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSV 275
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+L + L++ Y +CG L + +F M +DVV W+++IS A+HG+ K AL+ F +ME
Sbjct: 276 RLSTSLLDMYAKCGNLELAKRLFDSMNM--RDVVCWNAMISGMAMHGDGKGALKLFYDME 333
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
GVKPD ITF+ V ACS++G A + L +M Y + S+HY CLVD+LSRAG
Sbjct: 334 KVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLF 393
Query: 220 HEAYEVIRGMPVKVTAK----AWGALLGACRNFGELGLAEIAGRASAEVEPE-NAANYVL 274
EA +IR + AW A L AC N GE LAE+A +++ ++ YVL
Sbjct: 394 EEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDNHIHSGVYVL 453
Query: 275 LAKMYASVG 283
L+ +YA+ G
Sbjct: 454 LSNLYAASG 462
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 38/280 (13%)
Query: 3 SLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXX 61
S + H ++L A +F + P +N +I A N FK A+ ++ KM
Sbjct: 48 SSHKHHHESLTYACRVFEQIQ-NPTVCIYNTLIKAFLVNN--KFKSALQVFVKMLQSELK 104
Query: 62 XXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNV 121
C + K IHGY + + +G+ L+ Y G +V + V
Sbjct: 105 PDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYV 164
Query: 122 FSKMRDMDKDVVAWSSLISAYALHGEA-------------------------------KA 150
F ++ ++ VV+WS +IS YA G+ K
Sbjct: 165 FDEIPSLN--VVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKE 222
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
+L F+ M++ + PD F+ +L AC+H G + + + + V S + L+
Sbjct: 223 SLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLL 282
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
D+ ++ G L A + M ++ W A++ G+
Sbjct: 283 DMYAKCGNLELAKRLFDSMNMRDVV-CWNAMISGMAMHGD 321
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N ++N +IA + D + A+ L+ +M C AL + +I
Sbjct: 253 NAVSWNSMIAGCVSVRDYA-GALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKI 311
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
+ + LG+ L+ Y +CG L + +F+ M+ K V W++++ A+HG
Sbjct: 312 YESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKM--KTVSCWNAMVIGLAVHG 369
Query: 147 EAKAALETFKEMEMA---GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 203
+ + F EME + ++PD +TF+GVL ACSH G D A YF M + Y + S
Sbjct: 370 YCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDS 429
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAE 263
HY C+VD+L+R G L EAY++I P + + W LLGACR LAEI+ + A+
Sbjct: 430 KHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAK 489
Query: 264 VEPENAANYVLLAKMYASVG 283
++ +YVLL+ +YA G
Sbjct: 490 LKQLIDGDYVLLSNIYAEAG 509
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI Y R G + + VF M + ++ V+W+S+I+ + ALE F EM+ AGVK
Sbjct: 229 LIARYIRLGDVQAARRVFGCMPE--RNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 286
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQR-DYGVEASSDHYSCLVDVLSRAGRLHEAY 223
P +T + +L AC+ G + + ++ ++ +E+ + LV++ + G L A+
Sbjct: 287 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGN--ALVNMYCKCGNLSLAW 344
Query: 224 EVIRGMPVKVTAKAWGALL------GACRNFGELGLAEIAGRASAEVEPENAA 270
E+ GM +K T W A++ G C +L E+ + P+
Sbjct: 345 EIFNGMKMK-TVSCWNAMVIGLAVHGYCEEVFQL-FTEMEESLGGSIRPDRVT 395
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 146/299 (48%), Gaps = 4/299 (1%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
L A ELF+ M N +N +I A Q + +A+ L+ M
Sbjct: 266 LNVARELFNKMP-ERNIVAWNCMINAYN-QYERYNEALGLFFYMLANGFCPDKATFLSVL 323
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C L L + +H Y +++++ L + L++ Y + G L ++ +F+ + KD
Sbjct: 324 SVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLE-KKD 382
Query: 132 VVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
VV W+S+I+A A+HG AL F+ M E + + PD IT++GVL ACSH G ++A F
Sbjct: 383 VVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQF 442
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
M + YG+ +HYSC+VD+LSRAG EA +++ M ++ WGALL C+
Sbjct: 443 NLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHEN 502
Query: 251 LGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ +A AE+EP + Y LL+ +YA+ G + T G S V
Sbjct: 503 IPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSV 561
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
PN FN +I A N+ + ++ LY++M C + K
Sbjct: 70 PNVYIFNSMIKGYAKSNNPTM-SLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKC 128
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H +++ + + + +GL+ Y C + + VF K+ + VVAW+ LI+ Y ++
Sbjct: 129 VHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWN--VVAWTCLINGYVIN 186
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR---DYGVEAS 202
+ + ALE FKEM GV+ + +T + L AC+ D R+ + D V AS
Sbjct: 187 DQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFAS 246
Query: 203 SDHY---SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
+ + + +V++ ++ G L+ A E+ MP + AW ++ A
Sbjct: 247 NSNVILATAIVEMYAKCGWLNVARELFNKMPER-NIVAWNCMINA 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
L + ++E Y +CG L + +F+KM + +++VAW+ +I+AY + AL F M
Sbjct: 252 LATAIVEMYAKCGWLNVARELFNKMPE--RNIVAWNCMINAYNQYERYNEALGLFFYMLA 309
Query: 161 AGVKPDGITFLGVLKACSHA-----GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSR 215
G PD TFL VL C+ G A + M +D + + L+D+ ++
Sbjct: 310 NGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATA------LLDMYAK 363
Query: 216 AGRLHEAYEVIRGMPVKVTAKAWGALLGA 244
G L A ++ K W +++ A
Sbjct: 364 NGELGSAQKIFNNSLEKKDVVMWTSMINA 392
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 17/279 (6%)
Query: 41 QNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN--DIDPH 98
QN+ +AI L+ +M +VA L+L ++H ++ + +
Sbjct: 440 QNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYD 499
Query: 99 PQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
L + LI Y +CG + ++ +FS M DK ++W+S+I + HG A AL ++ M
Sbjct: 500 VYLENSLISMYAKCGEIEDAYRIFSNMNCRDK--ISWNSMIMGLSDHGRANEALNMYETM 557
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
GV PD +TFLGVL AC+HAGF D F+ M DY ++ +HY ++++L RAGR
Sbjct: 558 LEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGR 617
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL----AEIAGRASA---EVEPENAAN 271
+ +A E + +PV+ WGAL+G C GL A+IA RA+ E++P NA
Sbjct: 618 VKDAEEFVLRLPVEPNHTIWGALIGVC------GLSKTDADIARRAATRLLELDPLNAPG 671
Query: 272 YVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+V L +YA+ GV+ G SW++
Sbjct: 672 HVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWIL 710
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
+I Y G ++ + N+F M D DKD +AW+ +I Y + A+ F EM G
Sbjct: 401 MISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGAS 460
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY--SCLVDVLSRAGRLHEA 222
P T+ + A + D MQ E D Y + L+ + ++ G + +A
Sbjct: 461 PINSTYAVLFGAVGSVAYLDLGW-QLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDA 519
Query: 223 YEVIRGMPVKVTAKAWGALLGACRNFGE 250
Y + M + +W +++ + G
Sbjct: 520 YRIFSNMNCR-DKISWNSMIMGLSDHGR 546
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFN-PIIAALAAQNDGSFKAIALYRKMXXXX 59
++S YA D + +A E+F M P ++T++ + A+N + KA+ ++RKM
Sbjct: 250 LVSGYALCGD-MDSAAEMFSQM---PKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHR 305
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C +A+L K+IH + +RN+I P+P + S +++ Y +CG + +
Sbjct: 306 VRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETAR 365
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
+F+ M +DVV W+++ISA A +G K A+ +M +GVKP+ T + +L ACSH
Sbjct: 366 RIFNFTEHM-QDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSH 424
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
+G D L +F M D+GV +HY+ L+D+L RAG E+ + + + K
Sbjct: 425 SGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAGCFVESMKDLFMIDCKPGDHVLY 484
Query: 240 ALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXG 299
+LL CR G +G+ + +P ++A Y LL+ +YA++
Sbjct: 485 SLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAYGLLSSIYAALVTWGLVDEARHIMDERR 544
Query: 300 VKSTTGSSWV 309
++ +SW+
Sbjct: 545 LRQDRSTSWI 554
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
CV + L ++IHG + + + S +++AY +CG + ++ +F M +D+
Sbjct: 188 CVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDM--TVRDIP 245
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
AW++L+S YAL G+ +A E F +M K + ++ ++ + G A AL F +M
Sbjct: 246 AWTTLVSGYALCGDMDSAAEMFSQMP----KKNTYSWTALIGGYARNGMAHKALGVFRKM 301
Query: 194 ----QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEV---IRGMPVKVTA 235
R SS ++C + G+ A+ + IR PV V+A
Sbjct: 302 IMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSA 350
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 3/253 (1%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
+N +IA + N A+A +++M C +++L ++IH
Sbjct: 487 WNSMIAGFSI-NSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQI 545
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
I++ + +GS L+E Y +CG + + F M K++V W+ +I YA +G
Sbjct: 546 IKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPG--KNIVTWNEMIHGYAHNGYGLE 603
Query: 151 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 210
A+ +K+M +G KPD ITF+ VL ACSH+ D+ + F+ M + + V DHY+C++
Sbjct: 604 AVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCII 663
Query: 211 DVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAA 270
D L R GR +E ++ MP K W +L +CR + LA+ A + P N+A
Sbjct: 664 DCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSA 723
Query: 271 NYVLLAKMYASVG 283
YVLLA MY+S+G
Sbjct: 724 PYVLLANMYSSMG 736
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 24 VPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLI 83
V PNE TF ++ L+ N + + L+R M C + +
Sbjct: 200 VEPNEVTFTTMMGGLSQTNQVK-EGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVC 258
Query: 84 ------------KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDK- 130
K+IH +++ + L + L++ Y + G + ++ NVF ++DK
Sbjct: 259 DDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF---ENLDKH 315
Query: 131 DVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
VV+W+ +IS Y +++ ALE F+ M+ G +PD +T++ +L AC +G
Sbjct: 316 SVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSG 366
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 17 ELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
++F M P+ ++N I++ D +A+ L+RKM C
Sbjct: 373 QIFDCMS-SPSLISWNAILSGYNQSADHG-EAVELFRKMQFQWQNPDRTTLAIILSSCAE 430
Query: 77 VAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWS 136
+ L K++H + + S LI Y +CG + S +VFSK+ ++D VV W+
Sbjct: 431 LGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELD--VVCWN 488
Query: 137 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
S+I+ ++++ + AL FK M G P +F + +C+
Sbjct: 489 SMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCA 530
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 4/237 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C L + + IHG + D + S LI Y +CG + + +VF ++ +++
Sbjct: 234 CGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEV--TVRNLG 291
Query: 134 AWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
W++++ A A H E F +M+ + G+K + ITFL VL ACSHAG + YF
Sbjct: 292 MWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFEL 351
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M +DYG+E + HYS +VD+L RAG+L++A ++I MP++ T WGALL CR G
Sbjct: 352 M-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTK 410
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LA +E+ ++ +V+L+ YA+ G G+K TG SWV
Sbjct: 411 LASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWV 467
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 1 MISLYAHSPDNLP-TALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+I+ Y S +LP ++L++FH D P +T + + AQND ++ +R M
Sbjct: 61 LINFY--SKTHLPYSSLQIFH--DSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQG 116
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C +++L + K +H + ++ +GS +I+ Y +CG + +
Sbjct: 117 VPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAH 176
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFK----EMEMAGVKPDGITFLGVLK 175
NVF +M ++VV+WS LI Y GE +L FK E E GV + T VL+
Sbjct: 177 NVFDEMP--YRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLR 232
Query: 176 ACSHAGFADDALCYFTRMQRDYGVEASSDHY----SCLVDVLSRAGRLHEAYEVIRGMPV 231
C L R+ + S D S L+ + S+ G + EAY+V + V
Sbjct: 233 VC-----GGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV 287
Query: 232 KVTAKAWGALLGAC 245
+ W A+L AC
Sbjct: 288 R-NLGMWNAMLIAC 300
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 144/309 (46%), Gaps = 22/309 (7%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+ISLY+ L A +F M V N ++ IIA A + + L+R+M
Sbjct: 149 LISLYSRC-GLLGDAYRVFDEMSVR-NVVSWTAIIAGFAQEWRVDM-CLELFRRMRGLEL 205
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C+ AL + +H I+ + + + LI Y +CG +V++
Sbjct: 206 KPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALY 265
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+F M + KDVV W+S+I M + GV PD +TFLG+L +C H
Sbjct: 266 IFENM--VSKDVVTWNSMIVG----------------MRIMGVNPDAVTFLGILSSCRHG 307
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G + YF+ M D+G++ DHYSC+VD+L RAG L EA + I+ MPV A WG+
Sbjct: 308 GLVKEGQVYFSSMV-DHGLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGS 366
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL + R G + + A + +EP ++ + LA +YASVG G+
Sbjct: 367 LLSSSRLHGNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGL 426
Query: 301 KSTTGSSWV 309
K G SW+
Sbjct: 427 KPNPGCSWI 435
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 85 EIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYAL 144
+ H IR + +GS LI Y RCG L ++ VF +M ++VV+W+++I+ +A
Sbjct: 129 QYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMS--VRNVVSWTAIIAGFAQ 186
Query: 145 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 181
LE F+ M +KP+ T+ +L AC +G
Sbjct: 187 EWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSG 223
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 132/281 (46%), Gaps = 8/281 (2%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+N +I +N A++++R M C + + K +HG
Sbjct: 101 TWNTVIGGYV-KNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGL 159
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFS-KMRDMDKDVVAWSSLISAYALHGEA 148
+ ++ + L + L++ Y +CG + S VF +RD V W+++I+ A+HG A
Sbjct: 160 MVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRD---HVSVWNAMINGLAIHGHA 216
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 208
A F ME+ V PD +TF+G+LK CSH G + YF MQ + ++ HY
Sbjct: 217 LDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGT 276
Query: 209 LVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+VD+L RAG L EAY +I+ M V+ W +LL ACR G+ L E A A +
Sbjct: 277 MVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELGEF---AIANISRLE 333
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ ++VLL+ MY S GV+ G SW+
Sbjct: 334 SGDFVLLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWI 374
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF KM +DVV W+++I Y + AL F+ M A V+PDG TF V+ C+
Sbjct: 89 KVFDKMPV--RDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCAR 146
Query: 180 AG-FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
G F + + +++ VE + + LVD+ ++ GR+ + EV + V+ W
Sbjct: 147 LGSFCNAKWVHGLMVEKK--VELNYILTAALVDMYAKCGRVDVSKEVFECV-VRDHVSVW 203
Query: 239 GALL 242
A++
Sbjct: 204 NAMI 207
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 141/284 (49%), Gaps = 10/284 (3%)
Query: 31 FNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYG 90
FN +I + ++ + +++ +Y M C +AA + +++
Sbjct: 242 FNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQL 301
Query: 91 IRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKA 150
++ +LGS LI+ Y +CG ++++ VF M ++K+V +W+S+I Y +G
Sbjct: 302 MKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHM--LEKNVFSWTSMIDGYGKNGFPDE 359
Query: 151 ALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
ALE FK+M++ + P+ +TFL L AC+HAG + F M+ +Y ++ +HY+C+
Sbjct: 360 ALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACM 419
Query: 210 VDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENA 269
VD+L RAG L++A+E + MP + + W ALL +CR G + +A++A E+ NA
Sbjct: 420 VDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAAN---ELFKLNA 476
Query: 270 ----ANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
YV L+ A G G+ T SWV
Sbjct: 477 YGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 6/240 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRND-IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C ++ AL +H Y R D + +P L + L++ Y +CGC+ ++ +VF + D KDV
Sbjct: 257 CAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISD--KDV 314
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
AW+++IS AL+G+A+ +LE F++M + G KP+ TF+ VL AC+HA + L F
Sbjct: 315 GAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEE 374
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR---GMPVKVTAKAWGALLGACRNFG 249
M YGVE ++HY+C+VD+LSR+G + EA I G A WGA+L ACR +
Sbjct: 375 MSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYK 434
Query: 250 ELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ + + ++ + +VL +Y G G+K G S +
Sbjct: 435 NINVGNRVWKKLIDMGVADCGTHVLTYNIYREAGWDAEANRVRSMISEAGMKKKPGCSII 494
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
L + +I+ YG+ G + ++ +F +M + ++VV+WS++++AY+ E + L+ F EM+
Sbjct: 183 LWTAMIDGYGKIGDVESAREMFDEMPE--RNVVSWSAMMAAYSRVSEFREVLDLFLEMQS 240
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
GV+P+ + VL AC+H G + + +R V ++ + LVD+ S+ G +
Sbjct: 241 EGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVE 300
Query: 221 EAYEVIRGMPVKVTAKAWGALL 242
A V G+ K AW A++
Sbjct: 301 SALSVFDGISDK-DVGAWNAMI 321
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 13/293 (4%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N +N +IA QN KA+ + +M C + L+ K++
Sbjct: 242 NLEIWNSMIAGYV-QNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQM 300
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I + + SGLI+ Y +CG LVN+ VF + ++V W+++I+ +A++G
Sbjct: 301 HHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNE--RNVFCWNAMIAGFAVNG 358
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ LE ME + ++PD +TF+ VL AC+H G +AL ++M+ +YG+E HY
Sbjct: 359 QCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKME-EYGIEMGIRHY 417
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE-----IAGRAS 261
C+VD+L RAGRL EAYE+I+ MP+K GA++GAC ++ +AE I ++
Sbjct: 418 GCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGVDSA 477
Query: 262 AEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVVYSES 314
A V N VLL+ +YA+ G + G S ++ S S
Sbjct: 478 ACVNSHN----VLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSIILSNS 526
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L +K +H I+ D +G+ ++ AY +CG + ++ VF M +++ V W+++I
Sbjct: 67 LPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMH--ERNDVTWNAMI 124
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ---RD 196
Y +G+AK+AL F+EM +++ ++ + G A +F ++ +D
Sbjct: 125 GGYLRNGDAKSALLAFEEMP----GKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKD 180
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACR 246
+ ++ +VD ++ G + +A EV MP + W +++ G C+
Sbjct: 181 VVI------WTMMVDGYAKKGEMEDAREVFELMPER-NYFVWSSMVCGYCK 224
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQ+ A+ L+ +M C +A+L + +HG I +D +
Sbjct: 306 AQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNM 365
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEME 159
+ S L++ Y +CG +++ +F M K+V+ W+S+I YA +GEA+ AL ++ M
Sbjct: 366 LVSSALVDMYCKCGVPLDARVIFETMPI--KNVIIWNSMILGYAQNGEAEEALTLYERML 423
Query: 160 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
KPD I+F+GVL AC + + +F + + G+ + DHY+C++ +L R+G +
Sbjct: 424 QENFKPDNISFVGVLSACINTNMVKEGRKHFDSIS-EQGMTPTLDHYACMIILLGRSGNI 482
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMY 279
+A ++I+GMP K + W ALL C G++ AE+A +++P NA +Y++L+ +Y
Sbjct: 483 DKALDLIKGMPHKPDCRIWSALLSVCSK-GDIKTAEVAANHIFQLDPHNAGSYIMLSNLY 541
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
A+ G K + SWV
Sbjct: 542 AACGRWKDVAVVRSLMKSKNAKKFSAYSWV 571
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
++N +IA A+ N S KA+ + +M C + L K+IHG
Sbjct: 130 SYNTMIACFAS-NWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGR 188
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
+ + + + + + + + Y +CG + + +F M ++K++V+W+ +IS Y G+
Sbjct: 189 VVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGM--VNKNLVSWNLMISGYVKMGKPD 246
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+ F +M+++G+KPD +T VL A +G DDA F ++ +
Sbjct: 247 ECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDK 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
+ P S ++ AY + G + ++ N+F K+ KD + W+++I YA G + AL
Sbjct: 260 LKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDK--KDEICWTTMIVGYAQSGREEDALML 317
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F EM V+PD T V+ +C+ ++ GV+++ S LVD+
Sbjct: 318 FSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVIL-MGVDSNMLVSSALVDMYC 376
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGACRN 247
+ G +A + MP+K +LG +N
Sbjct: 377 KCGVPLDARVIFETMPIKNVIIWNSMILGYAQN 409
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 125/210 (59%), Gaps = 6/210 (2%)
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVA 134
+V++L++ +IHG+ IR ++ + + + LI AY + G L + ++F+ M + +DVV+
Sbjct: 323 TSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPE--RDVVS 380
Query: 135 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 194
W+S+IS++ H EA + F++ME AG PD ITF+ +L AC+H G +D F M
Sbjct: 381 WNSIISSHCKHPEA---ISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMC 437
Query: 195 RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVK-VTAKAWGALLGACRNFGELGL 253
Y ++ +HY C+V++ RAG + +AY +I M + V WGALL AC G + +
Sbjct: 438 EKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVTI 497
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
EI+ E+EP+N N+VLL K+Y G
Sbjct: 498 GEISANKLFELEPDNEHNFVLLMKIYEKAG 527
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 48 AIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIE 107
AIALY +M C + + + +E+H + +R + + L++
Sbjct: 198 AIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVD 257
Query: 108 AYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 167
Y +CG +V + +F+KM +D V+W+S+++ Y HG A+ F++M + G KPD
Sbjct: 258 MYSKCGDIVKARKIFNKMHF--RDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDY 315
Query: 168 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIR 227
+ +L + S + R GVE + + L+ S+ GRL +A +
Sbjct: 316 FSISAILTSVSSLDVGVQIHGWVIRQ----GVEWNLSIANSLIIAYSKHGRLDKARSIFN 371
Query: 228 GMPVKVTAKAWGALLGA-CRN 247
MP + +W +++ + C++
Sbjct: 372 LMPERDVV-SWNSIISSHCKH 391
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 87 HGYGIRNDIDP---HPQLG--SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISA 141
HG + I P H +G S L+ Y G + ++ ++F +M D W+SLIS
Sbjct: 129 HGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISG 188
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
YA G A+ + +M GV+PD TF VLK C G + R G
Sbjct: 189 YAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVR-CGFWD 247
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+ LVD+ S+ G + +A ++ M + + +W ++L
Sbjct: 248 DGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSV-SWNSML 287
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 158/315 (50%), Gaps = 16/315 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
MI+ Y+ S D + +A ELF MD + ++N +IA A Q+ +A+ L+ M
Sbjct: 269 MIAGYSKSGD-VHSARELFDQMD-DKDLLSYNAMIACYA-QSSKPKEALDLFNVMLKPDS 325
Query: 61 XXX--XXXXXXXXXXCVNVAALN----LIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGC 114
C + L + +I+ +GI +D H L + LI+ Y +CG
Sbjct: 326 SLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIV--LDDH--LATALIDLYAKCGS 381
Query: 115 LVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 174
+ + +F +R +DVVA+S++I ++G A A+E F+ M + P+ +T+ G+L
Sbjct: 382 IDKAYELFHGLRK--RDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGIL 439
Query: 175 KACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVT 234
A +HAG A++ F M +D G+ S DHY +VD+L RAG L EAY++I MP++
Sbjct: 440 TAYNHAGLAEEGYRCFISM-KDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPN 498
Query: 235 AKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXX 294
WGALL ACR L L EIA + ++E E A Y LL+ +YA+VG
Sbjct: 499 VGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTG 558
Query: 295 XXXXGVKSTTGSSWV 309
+ G SW
Sbjct: 559 VEGKKIIKIPGCSWT 573
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 150/289 (51%), Gaps = 15/289 (5%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I YA S L TA ++F M N ++N +I + A D I M
Sbjct: 126 LIHFYA-SCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEP 184
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRN---DIDPHPQLGSGLIEAYGRCGCLVN 117
C + +L+L +H + ++ ++ + + L++ Y +CG L
Sbjct: 185 DCYTMQSVIRA--CGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEI 242
Query: 118 SCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKA 176
+ VF M +DV +W+S+I +A+HG+AKAAL+ F M ++ + P+ ITF+GVL A
Sbjct: 243 AKQVFEGMSY--RDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSA 300
Query: 177 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
C+H+G D+ L YF M ++Y VE S HY CLVD+ +RAG + EA V+ MP+K A
Sbjct: 301 CNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAV 360
Query: 237 AWGALLGACRNFGELGLAEIAGRASAEVEPENAA----NYVLLAKMYAS 281
W +LL AC + + E++ + ++ N + YVLL+K+YAS
Sbjct: 361 IWRSLLDAC--YKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYAS 407
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 17/245 (6%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXX---XXXXXXXXXXCVNVAALNL 82
PN T+N +I + + KAI LY+ + C + +L
Sbjct: 44 PNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFE 103
Query: 83 IKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
K++H + ++ + + + LI Y CG L + VF +M + ++VV+W+ +I +Y
Sbjct: 104 GKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEW-RNVVSWNVMIDSY 162
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY--FTRMQRDYGVE 200
A G+ L F EM M +PD T V++AC G + F + D V
Sbjct: 163 AKVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVV 221
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRA 260
+CLVD+ + G L A +V GM + +W +++ LG A + G+A
Sbjct: 222 CDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR-DVSSWNSII--------LGFA-VHGKA 271
Query: 261 SAEVE 265
A ++
Sbjct: 272 KAALD 276
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
++ ALN +IH + ++ +++ + + LI Y +CG + ++ +F + +++ VV+
Sbjct: 298 SLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELN--VVSN 355
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+I+ + +G + AL +K M+ ++P+ +TFL VL AC+HAG ++ F M+
Sbjct: 356 NSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKS 415
Query: 196 DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE 255
Y E +DHY+C+VD+L RAG L EA ++IR + VK + WGALL A L LA+
Sbjct: 416 RYRNEPDADHYACMVDLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHLRLDLAK 475
Query: 256 IAGRASAEVEPENAANYVLLAKMYASVG 283
+A + ++EP NA YV+L+ +Y++ G
Sbjct: 476 LAAQHITKLEPANATPYVVLSNLYSAAG 503
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 121/210 (57%), Gaps = 2/210 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++A+ K++H ++ + + + LI+ Y +CG + ++ ++F + ++D +
Sbjct: 453 CSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEID--TM 510
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I A +G A+ A+ +M +G KP+ IT LGVL AC H+G ++A F +
Sbjct: 511 SWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSI 570
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ ++G+ +HY+C+VD+L +AGR EA ++I MP K W +LLGAC + L
Sbjct: 571 ETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDL 630
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVG 283
A I PE+ + Y++L+ +YA++G
Sbjct: 631 ANIVAEHLLATSPEDVSVYIMLSNVYAALG 660
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+N L+L ++HG+ I + + +GS LI+ Y + G + N+ +F ++ D KDVV
Sbjct: 352 CMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPD--KDVV 409
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALC 188
AWSSLI+ A G K A F +M G++ D VLKACS G +LC
Sbjct: 410 AWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLC 469
Query: 189 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
G E+ + L+D+ ++ G + +A + G ++ +W +++ C
Sbjct: 470 L------KKGYESEGVVTTALIDMYAKCGDIEDALSLF-GCLSEIDTMSWTSIIVGCAQN 522
Query: 249 GE 250
G
Sbjct: 523 GR 524
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 15 ALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXC 74
A++LF M P+ ++N IIA L ++ S +A+ M C
Sbjct: 190 AMKLFDKMP-EPDIVSWNSIIAGLV--DNASSRALRFVSMMHGKGLKMDEFTFPSVLKAC 246
Query: 75 VNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM---RDMDKD 131
L L +EIH Y I++ + S LI+ Y C L + +F + + +
Sbjct: 247 GCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSES 306
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+ W+S++S + ++G+ AL M +GV+ D TF VLK C + D L +
Sbjct: 307 LALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNF----DNLSLAS 362
Query: 192 RMQ---RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF 248
++ G E S L+D+ ++ G ++ A + +P K AW +L+ C F
Sbjct: 363 QVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLITGCARF 421
Query: 249 GELGLA 254
G LA
Sbjct: 422 GSDKLA 427
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C+ ++ K +H + I++ H + + +I Y +C ++++ N+F +M +++V
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMP--HRNIV 70
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKACSHAGFAD-DALCYFT 191
+W++++S AL + EM + + +P+ + VLKAC + + ++
Sbjct: 71 SWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
Q V+ + L+D+ + G L +A V +P K A +W L+
Sbjct: 131 IFQAKLDVDIVL--MNALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLI 178
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 142/281 (50%), Gaps = 6/281 (2%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+ I L QN A++++R+M C ++A L ++IH
Sbjct: 271 TWTSFIVGLV-QNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAV 329
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ +D + + + LI YG+CG + + +VF + ++D VV+ +++I AYA +G
Sbjct: 330 TVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELD--VVSINTMIYAYAQNGFGH 387
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
ALE F+ M+ G KP+ +TF+ +L AC++AG ++ F+ ++ ++ +E + DHY+C+
Sbjct: 388 EALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCM 447
Query: 210 VDVLSRAGRLHEAYEVI-RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+D+L RA R EA +I G V W LL AC+ GE+ +AE + + P +
Sbjct: 448 IDLLGRAKRFEEAAMLIEEGKNPDVI--QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 505
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++LL +YAS G +K T SWV
Sbjct: 506 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 546
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 76 NVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAW 135
N +L +K +H + +++ G LI+ Y +C + + +F +M + + +V W
Sbjct: 13 NKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN--RHIVTW 69
Query: 136 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 195
+S+IS++ G+ K A+E + M GV PD TF + KA S G + + Q+
Sbjct: 70 NSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREG-------QK 122
Query: 196 DYGVEA-----SSDHY--SCLVDVLSRAGRLHEA 222
+G+ SD + + +VD+ ++ G++ +A
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA 156
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L K IHG +++ ++ + L+ Y +C + +S VF+ + V
Sbjct: 213 CGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH--V 270
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
W+S I +G + AL F+EM + P+ TF +L ACS
Sbjct: 271 TWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACS 315
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ +G+++ Y + G + ++ VF ++ +DKDVV +++LI Y G ALE F++M
Sbjct: 139 VATGIVDMYAKFGKMKDARFVFDRV--LDKDVVLFTALIVGYNQRGLDGEALEVFEDMVG 196
Query: 161 AGVKPDGITFLGVLKACSHAG 181
+ +KP+ T VL +C + G
Sbjct: 197 SRIKPNEYTLASVLVSCGNLG 217
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 74 CVNVAALNLIKEIHGY-GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C ++ +L+L +H Y R D+D +G+ L+ Y +CG + VF+ + + KDV
Sbjct: 269 CASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMV--VHKDV 326
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 192
++W ++I A++G K ++ F M + GV PD +TF+G+L ACSH G + + +F
Sbjct: 327 ISWGTVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKA 386
Query: 193 MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELG 252
M+ YG+ HY C+VD+ RA EA ++GMPV+ W ALL AC+ G
Sbjct: 387 MRDSYGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEE 446
Query: 253 LAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++E R + LL+ +YAS G+K G SWV
Sbjct: 447 MSEWI-RGQIHDKNVGVGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWV 502
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 74 CVNVAALNLIKEIHGYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDV 132
C ++ A+ K IH YG+++ ID + + ++ Y +CG N+ NVF KM +DV
Sbjct: 166 CSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSK--RDV 223
Query: 133 VAWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDALCYFT 191
++W++L+ AYA G+ A+E FK+M ++G +P+ T + VL AC+ G
Sbjct: 224 ISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHD 283
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
+++ ++ + + LV++ + G + +V M V +WG ++
Sbjct: 284 YIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFN-MVVHKDVISWGTVI 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 110/283 (38%), Gaps = 20/283 (7%)
Query: 9 PDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXX 68
P NL +L + PN N + L+ +D L +M
Sbjct: 3 PQNLNQIAKLSQFQIINPNPQLLNQNLKLLSKSHDNVKAFFNLCNQMLSCSSSHNHYTFT 62
Query: 69 XXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDM 128
C + A EIH I++ + + L+ Y +V++ VF +
Sbjct: 63 HALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPS- 121
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 188
DVV+W+SLIS + G A+E F + VKP+ +T + + ACS G
Sbjct: 122 -PDVVSWTSLISGLSKCGFETEAIEAFSSIN---VKPNALTLVSAISACSSIGAIK---- 173
Query: 189 YFTRMQRDYG-----VEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
F + YG ++ + Y+ +D+ ++ G A V M K +W LL
Sbjct: 174 -FGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMS-KRDVISWTTLLM 231
Query: 244 ACRNFGELGLA-EIAGR--ASAEVEPENAANYVLLAKMYASVG 283
A G+ G A E+ + S E EP N + V + AS+G
Sbjct: 232 AYARGGQCGEAVEVFKQMIVSGEAEP-NESTVVTVLSACASIG 273
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 12 LPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXX 71
+ AL +F MDV + T+N ++A Q S A+ L+ ++
Sbjct: 358 MEDALRIFFSMDVK-DCCTWNSVLAGYV-QVGRSEDALRLFVQVRSLFVEIDDYTFSAVI 415
Query: 72 XXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKD 131
C ++A L L +++H ++ D + +G + C + N +
Sbjct: 416 RCCSDLATLQLGQQVHVLSLKVGFDTNKYVGKDAKK------CFETTSN---------DN 460
Query: 132 VVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 191
+ W+S+I YA HG+ ALE F M VKPD ITF+ VL ACSH G ++
Sbjct: 461 AIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQ 520
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ D+G+ +HY+C VD+ RAG L E ++ MP + A LLGACR+ G +
Sbjct: 521 SMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNI 580
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
LA + +EPE+ + YVLL+ +Y + GVK G SW+
Sbjct: 581 ELASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDEKASVTRLMRERGVKKVPGWSWI 638
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD-KDVVAWSSLI 139
+L+ ++H +++ ++ + + +I AY C L ++ VF + +D+V W+S++
Sbjct: 218 SLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSML 277
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
+AY LH + A + F EM+ G +PD ++ GV+ CS
Sbjct: 278 AAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCS 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 103 SGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAG 162
+ LI AY +C L + +F KM +D V+W+++IS Y + + + M ++G
Sbjct: 38 NNLITAYSKCAQLPLALQLFDKMPQ--RDTVSWNAVISGYVNTADLDSTWQLLNAMRVSG 95
Query: 163 VKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
D TF LK + A +M+ + V + S L+D+ ++ GR+
Sbjct: 96 HAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSG----SALLDMYAKCGRV 151
Query: 220 HEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLA 254
+A V R MP + +W L+ G+L +A
Sbjct: 152 DDALVVFRYMP-ECNYVSWNTLIAGYSRVGDLDMA 185
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 123/225 (54%), Gaps = 4/225 (1%)
Query: 84 KEIHGYGIRN-DIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAY 142
+ +H Y ++ +D +G+ L++ Y +CG + + +VF M + ++VVAW++++
Sbjct: 276 RWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM--LKRNVVAWNAMLGGL 333
Query: 143 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 202
A+HG K A++ F M + VKPDG+TF+ +L ACSH+G + YF ++ Y ++
Sbjct: 334 AMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPE 392
Query: 203 SDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASA 262
+HY+C+V +L RAGRL EA +++ M + G+L+G+C G L L E R
Sbjct: 393 IEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLL 452
Query: 263 EVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
E++P N +++L+ MYA G G+K G S
Sbjct: 453 EMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMS 497
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 129 DKDVVAWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAG---FAD 184
+++ VAW+ +I Y +G K A KEM G + +T VL ACS +G
Sbjct: 217 ERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGR 276
Query: 185 DALCYFTR-MQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
CY + M D+GV + LVD+ ++ GR++ A V R M +K AW A+LG
Sbjct: 277 WVHCYAVKEMGLDFGVMVGTS----LVDMYAKCGRINAALSVFRSM-LKRNVVAWNAMLG 331
Query: 244 --ACRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
A G++ + ++ EV+P+ LL+
Sbjct: 332 GLAMHGMGKIAV-DMFPSMVEEVKPDGVTFMALLS 365
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 30 TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGY 89
T+ I L QN A++++R+M C ++A L ++IH
Sbjct: 271 TWTSFIVGLV-QNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAV 329
Query: 90 GIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAK 149
++ +D + + + LI YG+CG + + +VF + ++D +V+ +++I AYA +G
Sbjct: 330 TVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELD--IVSINTMIYAYAQNGFGH 387
Query: 150 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 209
ALE F+ ++ G++P+ +TF+ +L AC++AG ++ F+ ++ ++ +E + DHY+C+
Sbjct: 388 EALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCM 447
Query: 210 VDVLSRAGRLHEAYEVI-RGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPEN 268
+D+L RA R EA +I G V W LL AC+ GE+ +AE + + P +
Sbjct: 448 IDLLGRAKRFEEATMLIEEGKNPDVI--QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 505
Query: 269 AANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++LL +YAS G +K T SWV
Sbjct: 506 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 546
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N +L +K +H + +++ G LI+ Y +C + + +F +M + + +V
Sbjct: 11 CTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN--RHIV 67
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+IS++ G+ K A+E + M GV PD TF + KA S G + +
Sbjct: 68 TWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG------- 120
Query: 194 QRDYGVEA-----SSDHY--SCLVDVLSRAGRLHEA 222
Q+ +G+ SD + + +VD+ ++ G++ +A
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDA 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+ +G+++ Y + G + ++ VF R +DKDVV +++LI Y HG ALE F++M
Sbjct: 139 VATGIVDMYAKFGKMKDARFVFD--RVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVG 196
Query: 161 AGVKPDGITFLGVLKACSHAG-FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 219
+ +KP+ T VL +C + G + L + ++ YG+E+ + L+ + S+ +
Sbjct: 197 SRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVK--YGLESVVASQTSLLTMYSKCNMV 254
Query: 220 HEAYEVIRGM 229
++ +V +
Sbjct: 255 EDSIKVFNSL 264
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N+ L K IHG ++ ++ + L+ Y +C + +S VF+ + V
Sbjct: 213 CGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH--V 270
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
W+S I +G + AL F+EM + P+ T +L ACS
Sbjct: 271 TWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACS 315
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 5/309 (1%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+I++YA D L T+ +F ++ N ST+N I +A A G +A+ +M
Sbjct: 693 LITMYAQCGD-LNTSSYIFDVL-ANKNSSTWNAIFSANAHYGPGE-EALKFIARMRNDGV 749
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
N+ L+ +++H + I+ + + + ++ YG+CG + +
Sbjct: 750 DLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR 809
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 180
+ + K +W+ LISA A HG + A E F EM G+KPD +TF+ +L ACSH
Sbjct: 810 ILPIPKIRSKR--SWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHG 867
Query: 181 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGA 240
G D+ L YF+ M ++GV + +H C++D+L R+GRL EA I MPV W +
Sbjct: 868 GLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRS 927
Query: 241 LLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGV 300
LL AC+ G L L A E+ + + YVL + + AS +
Sbjct: 928 LLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSL 987
Query: 301 KSTTGSSWV 309
K SW+
Sbjct: 988 KKKPACSWI 996
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
++IHGY ++ + + +G+ L+ YG G + + +F ++ + ++V+W+SL+ YA
Sbjct: 269 RQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEE--PNIVSWTSLMVCYA 326
Query: 144 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY---GVE 200
+G K L ++ + G+ G T V++ C F D + Y ++ D G++
Sbjct: 327 DNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTC--GMFGDKTMGY--QILGDVIKSGLD 382
Query: 201 ASSDHY-SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
SS + L+ + + EA V M + T +W +++ A + G
Sbjct: 383 TSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI-SWNSIITASAHNGRF 433
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 4/266 (1%)
Query: 20 HLMDVPPNESTFNPIIAALAAQNDGSFK-AIALYRKMXXXXXXXXXXXXXXXXXXCVNVA 78
L D P + + + +N G + A+ ++ +M C +
Sbjct: 165 QLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSC 224
Query: 79 ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSL 138
A+ + I RN + LG+ LI+ Y +CG + VF M++ K+V + +
Sbjct: 225 AIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKE--KNVFTLNVV 282
Query: 139 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-QRDY 197
I AL + AL F ME+ GV+ D +T + VL ACSH+G + F+ + Y
Sbjct: 283 IKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKY 342
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
G + HY+C+VD+L+RAG+L EA+++I+ MP + TA WG+LL ++ +L +E A
Sbjct: 343 GFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFA 402
Query: 258 GRASAEVEPENAANYVLLAKMYASVG 283
E+EP N A YV L+ +YA G
Sbjct: 403 ATKLVELEPYNTAYYVQLSNLYAEAG 428
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 7/264 (2%)
Query: 21 LMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCV-NV 77
L D P ++ ++N +I QN S A+ L+ +M V ++
Sbjct: 273 LFDCMPEKNVLSWNAMIRGYC-QNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADL 331
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
+AL+L +HG+ RN +D + + L++ Y +CG + + VF +M +KD +W++
Sbjct: 332 SALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEM--TEKDTGSWNA 389
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 197
LI+ Y ++G AK ALE F M G +P+ IT VL AC+H G ++ F M+R +
Sbjct: 390 LINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-F 448
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIA 257
G+ +HY C++D+L RAGRL EA ++I+ MP + L AC F ++ AE
Sbjct: 449 GIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERI 508
Query: 258 GRASAEVEPENAANYVLLAKMYAS 281
+ + ++E E A +YV+L +YA+
Sbjct: 509 LKVAVKMEKEGAGDYVMLRNLYAT 532
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Query: 95 IDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALET 154
I + +L + LI+ Y +CG + ++ +VF + + + + V W+++I +A+HG+ + A+
Sbjct: 91 IKMNDRLLASLIDMYAKCGEIDSASSVFHEHK-VKRKVWPWNAMIGGFAMHGKPEEAISL 149
Query: 155 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 214
F++M++ V P+ +TF+ +L ACSH + YF M DYG+ +HY C+VD+LS
Sbjct: 150 FEQMKVERVSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLS 209
Query: 215 RAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVL 274
R+ L EA E+I MP+ WGALL ACR + ++ GR E++P + VL
Sbjct: 210 RSELLKEAEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVL 269
Query: 275 LAKMYASVG 283
L +Y++ G
Sbjct: 270 LGNIYSTSG 278
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 10/270 (3%)
Query: 45 SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSG 104
+ +AI L+++M C + AL++ +++HG ID + +
Sbjct: 178 TVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTA 237
Query: 105 LIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
LI Y +CGCL ++ VF + +D+DV W+++I A HG K A+E F EME VK
Sbjct: 238 LIHMYSKCGCLESAREVFDDV--LDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVK 295
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYE 224
PD T + VL A +AG + +F +Q+ Y ++ + H+ C+VD+L++ G L EA +
Sbjct: 296 PDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAED 355
Query: 225 VIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPE-----NAANYVLLAKMY 279
I MP+K A W L+ AC+ + E A R +E + ++ +Y+L + +Y
Sbjct: 356 FINAMPMKPDAVIWRTLIWACKVHAD---TERAERLMKHLELQGMSAHDSGSYILASNVY 412
Query: 280 ASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
AS G G+ GSS +
Sbjct: 413 ASTGKWCDKAEVRELMNKKGLVKPPGSSRI 442
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 27/272 (9%)
Query: 21 LMDVPP--NESTFNPIIAALAAQNDGS--FKAIALYRKMXXXXXXXXXXXXXXXXXXCVN 76
L++ P N +N II A + ++ + F+A++L+ M +
Sbjct: 46 LLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKS 105
Query: 77 VAALNLI---KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
L L K++HG+ + + + LI Y G LV + VF +M +DVV
Sbjct: 106 CGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSH--RDVV 163
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+S+I+ + H A++ F+ M GV + T + VL+ C+ +G AL ++
Sbjct: 164 SWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSG----ALSVGRKV 219
Query: 194 Q---RDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL------GA 244
++ G++ ++ + L+ + S+ G L A EV + + W A++ G
Sbjct: 220 HGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDV-LDRDVFVWTAMIYGLACHGM 278
Query: 245 CRNFGELGLAEIAGRASAEVEPENAANYVLLA 276
C+ EL L + V+P+ V+L+
Sbjct: 279 CKEAIELFLE----METCNVKPDERTIMVVLS 306
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C ++ AL ++ + + IR ++D + LG+ +++ Y RCG + + VF +M++ KDV+
Sbjct: 122 CAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKE--KDVI 179
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W+SLIS A+HG A+ ALE F M G+ P ITF VLKA SH G + F M
Sbjct: 180 SWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESM 239
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+RDY +E +HY C+VD+L RAG+L EA I MP+K
Sbjct: 240 KRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIK--------------------- 278
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+A ++PE++ Y LL+ +YA GV+ G S +
Sbjct: 279 ------PNAPMKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLI 328
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 101 LGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEM 160
+G+GL++ Y +CGC+ S ++F M M++D+ W+ +I A H AK AL F+E
Sbjct: 283 IGTGLVDMYAKCGCIEESRDLFDGM--MERDIWTWTVMICGLASHDRAKEALVLFREFIR 340
Query: 161 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 220
G +P + F+GVL ACS AG + YF M YG+ +HY C+VD+ +RAG +
Sbjct: 341 EGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLID 400
Query: 221 EAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYA 280
EA +I M V+ W LL AC G + + E G +++P + +YV LA +YA
Sbjct: 401 EAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLIKMDPTHDGHYVQLAGIYA 460
Query: 281 S 281
Sbjct: 461 K 461
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 135/289 (46%), Gaps = 36/289 (12%)
Query: 21 LMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAAL 80
+ ++ PN+ TF ++ A+AA D S K
Sbjct: 479 IKEIKPNQYTFGSVLNAIAAAEDISLKHG------------------------------- 507
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
+ H + I+ ++ P + L++ YG+ G + S VF++ + K +W+ +IS
Sbjct: 508 ---QRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPE--KTQFSWTGMIS 562
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 200
AYA HG+ ++ + +KE+E G D ITFL VL AC G D F M + + +E
Sbjct: 563 AYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIE 622
Query: 201 ASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRA 260
+ +HYS +VD+L R GRL EA E++ +P +LLG+C+ G + +AE +
Sbjct: 623 PTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDS 682
Query: 261 SAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+++P ++ YVL+A +YA G GVK G SWV
Sbjct: 683 LIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWV 731
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 30 TFNPIIAALAAQNDG-SFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHG 88
++N +++ A + + +A+ L+ M C L K+IHG
Sbjct: 255 SWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHG 314
Query: 89 YGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEA 148
+ H + + LI Y +C L ++ VF M ++VV+W++LIS +
Sbjct: 315 LAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSA--RNVVSWTTLISI-----DE 367
Query: 149 KAALETFKEMEMAGVKPDGITFLGVLKACS-----HAGFADDALCYFTRMQRDYGVEASS 203
+ + F M + GV P+ +TF+G+L A + G LC + + + V S
Sbjct: 368 ENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNS- 426
Query: 204 DHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL 242
L+ + ++ + E+ ++ + + T +W AL+
Sbjct: 427 -----LITMYAKFESIQESKKIFEELNYQGTI-SWNALI 459
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 77 VAALNLIKE---IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
+ N++KE +HG +++ + + + LI Y + + S +F ++ + +
Sbjct: 396 ITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNY--QGTI 453
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
+W++LIS YA +G K A TF + +KP+ TF VL A + A D +L + R
Sbjct: 454 SWNALISGYAQNGLCKEAFLTFLS-AIKEIKPNQYTFGSVLNAIAAA--EDISLKHGQRC 510
Query: 194 QR---DYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGE 250
G+ L+D+ + G ++E+ V P K T +W ++ A G+
Sbjct: 511 HSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEK-TQFSWTGMISAYARHGD 569
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 40 AQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHP 99
AQN +A+ L+ +M C L L + IH + ++
Sbjct: 216 AQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGV 275
Query: 100 QLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM- 158
LG+ L+ Y + G ++ + +F +M + ++VV W+++I A HG + AL F+ M
Sbjct: 276 ILGTALVYMYAKNGDILTARKLFDEMPE--RNVVTWNAMICGLASHGHVEDALGLFECMK 333
Query: 159 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 218
E V P+ +TF+GVL AC HAG D F M+ +G+E + +HY C+VD+L R G+
Sbjct: 334 EEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGK 393
Query: 219 LHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKM 278
L EA EVI+GMP K GALL A +N G +AE + ++P N +V L+ M
Sbjct: 394 LLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNM 453
Query: 279 YASVG 283
YA G
Sbjct: 454 YAEAG 458
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 1 MISLYAHSP-DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
+ S +A SP NL A +F + PN +N +I A Q +++LY +M
Sbjct: 77 LFSSFALSPFGNLEHASRIFSSLH-KPNSFMWNTLIRA--HQQQQPHISLSLYIQMRRHG 133
Query: 60 XXXXXXXXXXXXXXCVNVA-ALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C +++ L K++H + ++ + +G+GL+ Y G LV++
Sbjct: 134 VIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDA 193
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF ++ K++ W+++I YA + AL+ F+ M + G +P+G T VL C+
Sbjct: 194 RYVFDEIPM--KNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCA 251
Query: 179 HAGFAD--DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAK 236
+G + + + F R++ GVE + LV + ++ G + A ++ MP +
Sbjct: 252 RSGCLELGERIHEFMRVK---GVEVGVILGTALVYMYAKNGDILTARKLFDEMPER-NVV 307
Query: 237 AWGALLGACRNFGE----LGLAEIAGRASAEVEPENAANYV 273
W A++ + G LGL E E+ NA +V
Sbjct: 308 TWNAMICGLASHGHVEDALGLFECM--KEEEIVVPNAVTFV 346
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 7/231 (3%)
Query: 84 KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYA 143
K++H +R QL + L++ Y +CG ++ + +VF + KDV++W+ +I Y
Sbjct: 275 KQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGI--FQKDVISWTCMIDGYG 332
Query: 144 LHGEAKAALETFKEMEMAG--VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 201
+G A+E F +M G V P+ +TFL VL AC H+G ++ F M+ YG++
Sbjct: 333 RNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDP 392
Query: 202 SSDHYSCLVDVLSRAGRLHEAYEVIRGM---PVKVTAKAWGALLGACRNFGELGLAEIAG 258
+HY+C +D+L RAG++ E + + M TA W +LL AC + E A
Sbjct: 393 EPEHYACFIDILGRAGKIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAA 452
Query: 259 RASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
++ ++EP A+N VL + YA++G G+ G+SW+
Sbjct: 453 KSLLQLEPNKASNIVLASNFYAAIGRWDCVGELRSMMREKGLVKEAGNSWI 503
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 81 NLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLIS 140
+L K++H I+ D + L++ Y R G L +S VF +M + +DVVAW++L+S
Sbjct: 75 SLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEM--LHRDVVAWNTLLS 132
Query: 141 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDY 197
+ G+ A+ +EM V+ T VLK C+ F M RD
Sbjct: 133 CFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDL 192
Query: 198 GVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
V +++ L+D S G +H A V G+
Sbjct: 193 VVLSTA-----LIDFYSSVGCVHHALNVFYGL 219
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 47 KAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLI 106
+AI + R+M C ++ AL +++HG + D L + LI
Sbjct: 142 EAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDL-VVLSTALI 200
Query: 107 EAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPD 166
+ Y GC+ ++ NVF ++ D++ +SL+S +G + E FK M + VKP+
Sbjct: 201 DFYSSVGCVHHALNVFYGLKGWKDDMIH-NSLVSGCIKNGRYR---EAFKVMSL--VKPN 254
Query: 167 GITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAY 223
+ VL CS C R G + + L+D+ ++ G++ +A+
Sbjct: 255 AVALTSVLVCCSEESDLLTGKQVHCVAVRQ----GFTFETQLCNVLLDMYAKCGKILQAW 310
Query: 224 EVIRGMPVK 232
V G+ K
Sbjct: 311 SVFDGIFQK 319
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 13/260 (5%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N +N +IA QN KA+ + +M C + L+ K++
Sbjct: 242 NLEIWNSMIAGYV-QNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQM 300
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
H I + + SGLI+ Y +CG LVN+ VF + ++V W+++I+ +A++G
Sbjct: 301 HHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNE--RNVFCWNAMIAGFAVNG 358
Query: 147 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 206
+ LE M+ + ++ D +TF+ VL AC+H G +AL ++M+ +YG+E HY
Sbjct: 359 QCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKME-EYGIEMGIRHY 417
Query: 207 SCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAE-----IAGRAS 261
C+VD+L RAG+L EAYE+I+ MP+K GA++GAC ++ +AE I ++
Sbjct: 418 GCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGADSA 477
Query: 262 AEVEPENAANYVLLAKMYAS 281
A V N VLL+ +YA+
Sbjct: 478 ACVNSHN----VLLSNIYAA 493
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L +K +H I+ D +G+ ++ AY +CG + ++ VF M + ++VV W+++I
Sbjct: 67 LPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPE--RNVVTWNAMI 124
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ---RD 196
Y +G+AK+AL F+EM +++ ++ + G A +F ++ +D
Sbjct: 125 GGYLRNGDAKSALLAFEEMP----GKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKD 180
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALL-GACR 246
+ ++ +VD ++ G + +A EV MP + W +++ G C+
Sbjct: 181 VVI------WTVMVDGYAKKGEMEDAREVFELMPER-NYFVWSSMVCGYCK 224
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 9/311 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNES--TFNPIIAALAAQNDGSFKAIALYRKMXXX 58
MI++Y + + A E+F+ M PN++ ++N I+ L QN +A+ + M
Sbjct: 367 MITVYCNC-GRVEDAKEVFNSM---PNKTLISWNSILVGLT-QNACPSEALDTFSMMNKL 421
Query: 59 XXXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNS 118
C ++L L +++ G I ++ + + L++ Y +CG +
Sbjct: 422 DVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMG 481
Query: 119 CNVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 178
VF M + D V+W++++ YA +G AL F EM +GV+P ITF G+L AC
Sbjct: 482 RKVFDGM--IKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACD 539
Query: 179 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAW 238
H G ++ F M+ DY + +HYSC+VD+ +R G EA +I MP + A W
Sbjct: 540 HCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMW 599
Query: 239 GALLGACRNFGELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXX 298
++L C + G + ++A +++P N+ Y+ L+ + A+
Sbjct: 600 LSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRELMRNK 659
Query: 299 GVKSTTGSSWV 309
V+ G SW+
Sbjct: 660 NVQKIPGCSWM 670
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 4/284 (1%)
Query: 26 PNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKE 85
P+ T++ +I+ + + KA+ +RK+ +A + E
Sbjct: 269 PDLVTWSALISGYSQCGEYQ-KALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCE 327
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
IHGY +R+ ++ ++ S LI+ Y +CG L VF M +++++++++S+I AY LH
Sbjct: 328 IHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIM--LERNIISYNSMILAYGLH 385
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G A A F EM G+ PD TF +L AC HAG D F RM+ ++ ++A +H
Sbjct: 386 GCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEH 445
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
Y +V +L G L EAY + + +P V GALL C ++G LAE + +
Sbjct: 446 YVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGALLSCCDSYGNSELAETVAQQIFKSN 505
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P + V+L+ +YA G G K G SW+
Sbjct: 506 PADNVYRVMLSNIYAGDG-RWDDVKKLRDKMVGGQKKMRGVSWI 548
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 19/239 (7%)
Query: 20 HLMDVPPNESTF--NPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNV 77
H+ D S F N +I A A S AI+L+R M C +
Sbjct: 59 HVFDKTSTRSVFLWNSMIRAFAKARRFS-NAISLFRTMLVDDIRPDNYTYACAIRACADS 117
Query: 78 AALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSS 137
+++ +HG + + P S L+ AY + G + + VF + ++ D+V W+S
Sbjct: 118 FDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGI--VEPDLVLWNS 175
Query: 138 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR----M 193
LISAY G + ++ F M +AG KPDG T G+L G AD +L + +
Sbjct: 176 LISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLL-----GGIADSSLLSIGQELHGL 230
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGM--PVKVTAKAWGALLGACRNFGE 250
+ G+++ S LV + SR + AY V G+ P VT W AL+ GE
Sbjct: 231 SQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVT---WSALISGYSQCGE 286
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 80 LNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLI 139
L++ +E+HG ++ +D +GS L+ Y RC C+ ++ VF + + D+V WS+LI
Sbjct: 221 LSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGI--FNPDLVTWSALI 278
Query: 140 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 199
S Y+ GE + AL F+++ M K D + VL + + C +G+
Sbjct: 279 SGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPG-CEIHGYVLRHGL 337
Query: 200 EASSDHYSCLVDVLSRAGRLHEAYEVIRGM 229
E+ S L+D+ S+ G LH V R M
Sbjct: 338 ESDVKVSSALIDMYSKCGFLHLGTCVFRIM 367
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 121/224 (54%), Gaps = 6/224 (2%)
Query: 86 IHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALH 145
+H +G +D + + L++ Y + G + N+ N+F++++ KD+V+W++++ + +
Sbjct: 373 VHKFGFESD----SVVTNSLVDMYAKFGFIDNALNIFNEIKT--KDLVSWNTIMMGLSYN 426
Query: 146 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 205
G+ ++ F+E+ G+ PD IT VL AC++ D+ + F++M+ ++GV+ +H
Sbjct: 427 GKVCVTMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEEEH 486
Query: 206 YSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGLAEIAGRASAEVE 265
YS +V++L RAG L EA +++ MP K T W ++L AC G+L E+ E
Sbjct: 487 YSYVVEMLCRAGNLKEAVDIVEKMPYKTTTDIWRSILSACAVSGDLQDIEVVATKIMERA 546
Query: 266 PENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
P+ + Y++LA++Y G G K G SWV
Sbjct: 547 PQISLPYLVLAQVYQMSGRWESAVRVRKAMENRGSKEFIGCSWV 590
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMD---- 129
C++ + N + +H + ++ ++ + LG+ I+ Y G + ++ VF + +
Sbjct: 25 CLSHKSSNFLNIVHAHFLKLGLNSYTYLGNRCIDLYTEFGNINDALKVFDDISYKNSTSW 84
Query: 130 -------------------------KDVVAWSSLISAYALHGEAKAALETFKEMEMAGVK 164
+DVV+W+++IS YA G + AL F EM+ AGV+
Sbjct: 85 NICLKGLFKSGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVEMQGAGVR 144
Query: 165 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY-SCLVDVLSRAGRLHEAY 223
P G TF + S + A + R G+E S+ + L+ + + + +
Sbjct: 145 PSGFTFSILTSLVSSSCRAKEVHGMMIRS----GMELSNVVIGNSLIAMYGKFDLVDYCF 200
Query: 224 EVIRGMPVKVTAKAWGALLGACRNFG--ELGLAEIAGRASAEVEPENAANYVLLA 276
VI M ++ +W +L+ AC G EL L + +AE+ P+ L++
Sbjct: 201 GVILSMK-QLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMS 254
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 84 KEIHGYGIRNDID-PHPQLGSGLIEAYGRCGCLVNSC-NVFSKMRDMDKDVVAWSSLISA 141
KE+HG IR+ ++ + +G+ LI YG+ LV+ C V M+ +D ++W+SLI A
Sbjct: 164 KEVHGMMIRSGMELSNVVIGNSLIAMYGKFD-LVDYCFGVILSMKQLD--FISWNSLIWA 220
Query: 142 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-----AGFADDALCYFTRMQRD 196
G + ALE F M+ A + PD T ++ CS+ G A C+
Sbjct: 221 CHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSVCSNLRDLEKGKQVFAFCF------K 274
Query: 197 YGVEASSDHYSCLVDVLSRAGRLHEA 222
G +S S +D+ S+ RL +A
Sbjct: 275 VGFVYNSIVSSAAIDLFSKCNRLEDA 300
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C N L K+IH Y + + +GS LI+ Y + G L ++ +F ++++ +VV
Sbjct: 393 CANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE--PNVV 450
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 193
W+S+IS ALHG+ K A+ F+ M G+ P+ +TF+GVL ACSH G ++ YF M
Sbjct: 451 LWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMM 510
Query: 194 QRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGELGL 253
+ Y + +HY+ +V++ RAG L EA I + W + L +CR +
Sbjct: 511 KDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNM 570
Query: 254 AEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWV 309
+ + P + Y+LL+ M +S GVK G SWV
Sbjct: 571 GKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 77 VAALNLI---KEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKM-------- 125
V++L+L+ +++HG + ++ + S L+E YG+CG + + + +
Sbjct: 276 VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKG 335
Query: 126 ------RDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
++ +V+WSS++S Y +G+ + ++TF+ M + D T ++ AC++
Sbjct: 336 NFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACAN 395
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
AG + +Q+ G+ + S L+D+ S++G L +A + + + W
Sbjct: 396 AGILEFGKQIHAYIQK-IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWT 453
Query: 240 ALLGACRNFGE 250
+++ C G+
Sbjct: 454 SMISGCALHGQ 464
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 1 MISLYAHSPDNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXXX 60
+++LY S NL A +LF + N T+ +I+ A S +L+R+M
Sbjct: 73 LLTLYVKS-SNLDHAHKLFDEI-THKNTQTWTILISGFARAAGSSELVFSLFREMQADGA 130
Query: 61 XXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCN 120
C + K IH + +RN + L + +++ Y +C + +
Sbjct: 131 CPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAES 190
Query: 121 VFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEM 158
F M ++KDVV+W+ +I AY G+ + +LE F+
Sbjct: 191 FFELM--IEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C + L+L + +H I + LG+ L++ YG+ G L + VF +M ++V
Sbjct: 222 CAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEK--RNVW 279
Query: 134 AWSSLISAYALHGEAKAALETFKEM---EMAGVKPDGITFLGVLKACSHAGFADDALCYF 190
WS++I A HG A+ AL F M + + P+ +T+LGVL ACSHAG D+ YF
Sbjct: 280 TWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYF 339
Query: 191 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNF-- 248
M+ +G++ HY +VDVL RAG L EAY I+ MP W LL AC
Sbjct: 340 RDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVHDV 399
Query: 249 -GELGLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSS 307
G+ + + E+EP+ N V++A MYA VG G+K G S
Sbjct: 400 CDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRRVMRDGGLKKMAGES 459
Query: 308 WV 309
V
Sbjct: 460 CV 461
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 6/243 (2%)
Query: 1 MISLYAHSP-DNLPTALELFHLMDVPPNESTFNPIIAALAAQNDGSFKAIALYRKMXXXX 59
++ ++ SP NL A +L P+ ++N +I A+ +D ++I +++KM
Sbjct: 48 LVYFFSLSPFKNLSHARKLVFHFSNNPSPISWNILIRGYAS-SDSPIESIWVFKKMRENG 106
Query: 60 XXXXXXXXXXXXXXCVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSC 119
C L K++H ++ +D + + +I YG C +V +
Sbjct: 107 VKPNKLTYPFIFKSCAMALVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYAR 166
Query: 120 NVFSKMRDMDKDVVAWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 179
VF +M + +V+W+S+++A + + F +M +PD + + +L C+
Sbjct: 167 KVFDEM--CVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAE 224
Query: 180 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWG 239
G+ +++ G+ S + LVD+ ++G L A V M K W
Sbjct: 225 LGYLSLGRWVHSQLILK-GMVLSVHLGTALVDMYGKSGALGYARVVFERME-KRNVWTWS 282
Query: 240 ALL 242
A++
Sbjct: 283 AMI 285
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 119/239 (49%), Gaps = 4/239 (1%)
Query: 74 CVNVAALNLIKEIHGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVV 133
C V ++ K+IH ++ + Q+G+ ++E Y +CG + ++ +FS M D+V
Sbjct: 511 CGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGM--ASTDIV 568
Query: 134 AWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA--GFADDALCYFT 191
+W++LIS Y H + ALE + +M+ G+KPD ITF+ ++ A DD F
Sbjct: 569 SWNTLISGYLTHRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFN 628
Query: 192 RMQRDYGVEASSDHYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLGACRNFGEL 251
M+ Y +E +S HYS + VL G L EA E I M K +A W ALL CR
Sbjct: 629 SMKTVYHIEPTSQHYSSFISVLGHWGLLEEALETINKMSFKPSAFVWRALLDGCRLHKNT 688
Query: 252 GLAEIAGRASAEVEPENAANYVLLAKMYASVGXXXXXXXXXXXXXXXGVKSTTGSSWVV 310
+ ++A + +EP + + Y+L++ +++S G G + SW++
Sbjct: 689 MIGKLAAKNILALEPNDPSTYILVSNLHSSSGRWDCSERTRENMREKGFRKHPAQSWII 747
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 27 NESTFNPIIAALAAQNDGSFKAIALYRKMXXXXXXXXXXXXXXXXXXCVNVAALNLIKEI 86
N T+N +++ L +G KA+ L+ +M C +A + +++
Sbjct: 363 NCVTYNVLLSGLCRNAEG-LKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQM 421
Query: 87 HGYGIRNDIDPHPQLGSGLIEAYGRCGCLVNSCNVFSKMRDMDKDVVAWSSLISAYALHG 146
HG+ I+ + + L++ Y RCG +V++ ++ ++ ++ V W+S++ YA +G
Sbjct: 422 HGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSS--VVWTSMMCGYARNG 479
Query: 147 EAKAALETFK--EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 204
+ + A F E + D + +L C G+ D ++ + +G ++
Sbjct: 480 QPREAFSLFHLGHSEWKLIM-DEVALTSMLSLCGTVGYHDMGKQIHCQVLK-FGFHSNVQ 537
Query: 205 HYSCLVDVLSRAGRLHEAYEVIRGMPVKVTAKAWGALLG 243
+ +V++ + G + +A ++ GM +W L+
Sbjct: 538 VGNVVVEMYFKCGNVDDAIKMFSGM-ASTDIVSWNTLIS 575