Miyakogusa Predicted Gene

Lj0g3v0071179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0071179.1 Non Characterized Hit- tr|I1GSZ5|I1GSZ5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.03,4e-17,seg,NULL; DUF761,Protein of unknown function DUF761,
plant; DUF4408,Domain of unknown function DUF44,CUFF.3490.1
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093440.1 | DUF4408 domain protein | LC | chr5:40793192-40...   105   5e-23
Medtr5g093430.1 | DUF4408 domain protein | LC | chr5:40785117-40...   101   7e-22
Medtr3g053160.1 | DUF4408 domain protein | HC | chr3:21098828-21...    75   4e-14

>Medtr5g093440.1 | DUF4408 domain protein | LC |
           chr5:40793192-40794030 | 20130731
          Length = 198

 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 100/228 (43%), Gaps = 39/228 (17%)

Query: 1   MNKIQKSQXXXXXXXX-XXXITPFLPSSLRPTFLYFILNFTIIALGAEAGLLSVFXXXXX 59
           MNK+ KSQ            ITPFLPS LRP++LY I N  IIALGAEAGLLSVF     
Sbjct: 3   MNKVDKSQVIVLSFLAFLLVITPFLPSFLRPSYLYLIFNLLIIALGAEAGLLSVFSEPSE 62

Query: 60  XXXXXXXXXXXXXXXXXXXVKKELKGVENSAAPQSQRFVFVRKMNNVVQNCPSRPEALFT 119
                               +KE +G+ N+A   SQ                        
Sbjct: 63  DRKQHISASVTQKHVSLEPQEKEARGIVNNACSVSQ------------------------ 98

Query: 120 EKIEAPITTCVNGTSEIVKEELKAVEKSAVSQRDVCVTIVEKVQKCLSRPSLFFIXXXXX 179
           E+ E         TSE          K  V    V VT VEK++KC S  S+FFI     
Sbjct: 99  EQKEKKPKVVEKSTSE----------KKIVF---VGVTKVEKMKKCPSMASIFFIEDGED 145

Query: 180 XXXXXXXXXXXXXXXXXXVLGQELFAKAEAFIGNFYKQLKMQREESSI 227
                             V GQELFAKAEAFIGNFYKQLKMQRE+S +
Sbjct: 146 DLEVKNEEVEVEDEIYG-VNGQELFAKAEAFIGNFYKQLKMQREKSCV 192


>Medtr5g093430.1 | DUF4408 domain protein | LC |
           chr5:40785117-40786354 | 20130731
          Length = 194

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 105/233 (45%), Gaps = 54/233 (23%)

Query: 1   MNKIQKSQXXXXXXXXXXXITPFL-PSSLRPTFLYFILNFTIIALGAEAGLLSVFXXXXX 59
           MNK+ KSQ           +   L PSSLRPT+LY I N  IIALGAEAGLLSV      
Sbjct: 3   MNKVNKSQVIVLSILLLLLVITPLLPSSLRPTYLYLIFNILIIALGAEAGLLSVL----- 57

Query: 60  XXXXXXXXXXXXXXXXXXXVKKELKGVENSAAPQSQRFVFVRKMNNVVQNCPSRPEALFT 119
                                       +  +   ++ V V           ++P+    
Sbjct: 58  ----------------------------SEPSEDKKQHVSV-----------TQPKHEML 78

Query: 120 EKIEAPITTCVNGTSEIVKEE----LKAVEKSAVSQR----DVCVTIVEKVQKCLSRPSL 171
           E+ E   +  +N    + +E+     K VEKS   ++    DV V+ V+KV+KC S PS+
Sbjct: 79  EQEEKEASNIINNAYSVSEEQNENKPKVVEKSVSEKKIVYVDVGVSKVDKVKKCPSMPSI 138

Query: 172 FFIXXXXXXXXXXXXXXXXXXXXXXXVLGQELFAKAEAFIGNFYKQLKMQREE 224
           FFI                       V GQELFAKAEAFIGNFYKQLKMQREE
Sbjct: 139 FFIEDGEDDLEVKDEEVEVEDEICG-VNGQELFAKAEAFIGNFYKQLKMQREE 190


>Medtr3g053160.1 | DUF4408 domain protein | HC |
           chr3:21098828-21099340 | 20130731
          Length = 170

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 98/227 (43%), Gaps = 59/227 (25%)

Query: 1   MNKIQKSQXXXXXXXXXX-XITPFLPSSLRPTFLYFILNFTIIALGAEAGLLSVFXXXXX 59
           MNK +KSQ              P LPSSL+ T+LYFI NF II L +EAGL S+      
Sbjct: 1   MNKFKKSQVLVLFVLLLFLAFIPLLPSSLKSTYLYFISNFIIIVLASEAGLFSLL----- 55

Query: 60  XXXXXXXXXXXXXXXXXXXVKKELKGVENSAAPQSQRFVFVRKMNNVVQNCPSRPEALFT 119
                                   K +E+     S     ++K        P  P   ++
Sbjct: 56  -----------------------YKPLEDKMQSSS----LIKK--------PITPSDGYS 80

Query: 120 EKIEAPITTCVNGTSEIVKEELKAVEKSAV-SQRDVCVTIVEKVQKCLSRPSLFFIXXXX 178
           EK EA I++     S+ V++ LK VEKSA  ++R V  T V+ V+K        FI    
Sbjct: 81  EKKEATISSV----SKHVEKRLKPVEKSASETERVVSFTKVDIVKKST------FIGSGE 130

Query: 179 XXXXXXXXXXXXXXXXXXXVLGQELFAKAEAFIGNFYKQLKMQREES 225
                                GQEL+ KA+ FI NFYKQLK+Q++ES
Sbjct: 131 DDDIEIQEEIEGLN-------GQELYVKADVFIRNFYKQLKLQKDES 170