Miyakogusa Predicted Gene

Lj0g3v0070689.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0070689.2 tr|A8CF51|A8CF51_BRACM AP2/EREBP transcription
factor OS=Brassica campestris GN=BcAP2 PE=2 SV=1,32.65,5e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.3433.2
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g031880.1 | AP2-like ethylene-responsive transcription fac...    61   1e-09
Medtr2g098180.1 | AP2-like ethylene-responsive transcription fac...    50   2e-06
Medtr7g080460.1 | AP2-like ethylene-responsive transcription fac...    50   2e-06
Medtr4g127930.1 | AP2-like ethylene-responsive transcription fac...    50   2e-06

>Medtr5g031880.1 | AP2-like ethylene-responsive transcription factor
           | HC | chr5:13684967-13680655 | 20130731
          Length = 514

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 97/261 (37%), Gaps = 67/261 (25%)

Query: 6   NWLTFSLTPMEIMLRSSSTDSQFLQYDTASS-----SH-----CFLDNFYANVLTNPKSE 55
           NWL+FSL+PME+         QF+QYD ASS     SH      FLDN Y +      ++
Sbjct: 12  NWLSFSLSPMEM--------PQFVQYDQASSVTTNSSHQNHHNYFLDNLYTHNGWGNGTK 63

Query: 56  MLNQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXX 115
              Q       E SI    +D S+   + + PP     KLEDF    Q E          
Sbjct: 64  AEEQ-------EQSIW--FVDSSNT--VNHTPP----PKLEDFLGDSQTETQDSSLT--- 105

Query: 116 XXXQIYEHVPPPPGFFNGEQDLKAAVDVAAE---FRA--------KLDDSVEIPKN-DVV 163
               +Y+H      +F G+           +   F+A        ++DDS  I K+    
Sbjct: 106 ---NMYDHHH----YFGGDHSQHQHQQHHQDLTGFQAFSNNNSGSEVDDSGSIGKSGQAA 158

Query: 164 PGGEFGVNSAEGNKDETLXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXX 211
            G EFG      + +E                                            
Sbjct: 159 CGNEFGTTHCVESVNEYAYSTAAAAAVGANGTLSLGVAQSSEENAIVAVAADSDSSKKIV 218

Query: 212 HTFGQRTSIYRGVTRHRWTGR 232
            TFGQRTSIYRGVTRHRWTGR
Sbjct: 219 DTFGQRTSIYRGVTRHRWTGR 239


>Medtr2g098180.1 | AP2-like ethylene-responsive transcription factor
           | HC | chr2:41966348-41962851 | 20130731
          Length = 525

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/20 (100%), Positives = 20/20 (100%)

Query: 213 TFGQRTSIYRGVTRHRWTGR 232
           TFGQRTSIYRGVTRHRWTGR
Sbjct: 163 TFGQRTSIYRGVTRHRWTGR 182


>Medtr7g080460.1 | AP2-like ethylene-responsive transcription factor
           | HC | chr7:30621534-30617123 | 20130731
          Length = 689

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/20 (100%), Positives = 20/20 (100%)

Query: 213 TFGQRTSIYRGVTRHRWTGR 232
           TFGQRTSIYRGVTRHRWTGR
Sbjct: 255 TFGQRTSIYRGVTRHRWTGR 274


>Medtr4g127930.1 | AP2-like ethylene-responsive transcription factor
           | HC | chr4:53237003-53232820 | 20130731
          Length = 512

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/20 (100%), Positives = 20/20 (100%)

Query: 213 TFGQRTSIYRGVTRHRWTGR 232
           TFGQRTSIYRGVTRHRWTGR
Sbjct: 155 TFGQRTSIYRGVTRHRWTGR 174